Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:37:31 (2758260): wrapper (7.7.26015): starting
14:37:31 (2758260): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 14:37:31] Arguments: --nthreads 8
[2025-06-03 14:37:31] Threads: 8
[2025-06-03 14:37:31] Checking for CVMFS
[2025-06-03 14:37:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 14:37:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 14:37:31] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 14:37:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 14:37:31] 2.12.6.0 907015 32307 420852 146752 1 534 21550089 25181185 10995 16776704 1 127514190 99.466 165077589 23056 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 14:37:31] CVMFS is ok
[2025-06-03 14:37:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 14:37:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 14:37:31] Further information can be found at the LHC@home message board.
[2025-06-03 14:37:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 14:37:31] Checking for apptainer binary...
[2025-06-03 14:37:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 14:37:31] Running /usr/bin/apptainer --version
[2025-06-03 14:37:31] apptainer version 1.4.1-1.el9
[2025-06-03 14:37:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 14:37:31] c-16-38.aglt2.org
[2025-06-03 14:37:31] apptainer works
[2025-06-03 14:37:31] Set ATHENA_PROC_NUMBER=8
[2025-06-03 14:37:31] Set ATHENA_CORE_NUMBER=8
[2025-06-03 14:37:31] Starting ATLAS job with PandaID=6677734974
[2025-06-03 14:37:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 01:22:15]  *** The last 200 lines of the pilot log: ***
[2025-06-04 01:22:15] 2025-06-04 05:21:52,501 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6677734974/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 01:22:15] 2025-06-04 05:21:52,501 | INFO     | extracted standard info from prmon json
[2025-06-04 01:22:15] 2025-06-04 05:21:52,502 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 01:22:15] 2025-06-04 05:21:52,502 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 01:22:15] 2025-06-04 05:21:52,502 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 01:22:15] 2025-06-04 05:21:52,502 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 01:22:15] 2025-06-04 05:21:52,521 | INFO     | fitting pss+swap vs Time
[2025-06-04 01:22:15] 2025-06-04 05:21:52,522 | INFO     | sum of square deviations: 78647946525.0648
[2025-06-04 01:22:15] 2025-06-04 05:21:52,535 | INFO     | sum of deviations: 100106151996.10883
[2025-06-04 01:22:15] 2025-06-04 05:21:52,536 | INFO     | mean x: 1748995181.0552924
[2025-06-04 01:22:15] 2025-06-04 05:21:52,536 | INFO     | mean y: 2060414.654028436
[2025-06-04 01:22:15] 2025-06-04 05:21:52,536 | INFO     | -- intersect: -2224128382.0157485
[2025-06-04 01:22:15] 2025-06-04 05:21:52,536 | INFO     | intersect: -2224128382.0157485
[2025-06-04 01:22:15] 2025-06-04 05:21:52,537 | INFO     | chi2: 5.133676204126417
[2025-06-04 01:22:15] 2025-06-04 05:21:52,539 | INFO     | sum of square deviations: 76799129544.45227
[2025-06-04 01:22:15] 2025-06-04 05:21:52,559 | INFO     | sum of deviations: 137425955599.27048
[2025-06-04 01:22:15] 2025-06-04 05:21:52,559 | INFO     | mean x: 1748995028.5636942
[2025-06-04 01:22:15] 2025-06-04 05:21:52,559 | INFO     | mean y: 2063474.555732484
[2025-06-04 01:22:15] 2025-06-04 05:21:52,559 | INFO     | -- intersect: -3127624512.332417
[2025-06-04 01:22:15] 2025-06-04 05:21:52,560 | INFO     | intersect: -3127624512.332417
[2025-06-04 01:22:15] 2025-06-04 05:21:52,560 | INFO     | chi2: 4.471070176046262
[2025-06-04 01:22:15] 2025-06-04 05:21:52,561 | INFO     | current chi2=4.471070176046262 (change=12.907047537348692 %)
[2025-06-04 01:22:15] 2025-06-04 05:21:52,562 | INFO     | right removable region: 627
[2025-06-04 01:22:15] 2025-06-04 05:21:52,562 | INFO     | sum of square deviations: 76798722064.45224
[2025-06-04 01:22:15] 2025-06-04 05:21:52,572 | INFO     | sum of deviations: -35574964560.01903
[2025-06-04 01:22:15] 2025-06-04 05:21:52,573 | INFO     | mean x: 1748995333.5636942
[2025-06-04 01:22:15] 2025-06-04 05:21:52,573 | INFO     | mean y: 2071594.025477707
[2025-06-04 01:22:15] 2025-06-04 05:21:52,573 | INFO     | -- intersect: 812247145.5789195
[2025-06-04 01:22:15] 2025-06-04 05:21:52,573 | INFO     | intersect: 812247145.5789195
[2025-06-04 01:22:15] 2025-06-04 05:21:52,574 | INFO     | chi2: 2.574913672071015
[2025-06-04 01:22:15] 2025-06-04 05:21:52,574 | INFO     | current chi2=2.574913672071015 (change=49.84269420807422 %)
[2025-06-04 01:22:15] 2025-06-04 05:21:52,576 | INFO     | sum of square deviations: 74978707453.7496
[2025-06-04 01:22:15] 2025-06-04 05:21:52,593 | INFO     | sum of deviations: -121256704282.27127
[2025-06-04 01:22:15] 2025-06-04 05:21:52,593 | INFO     | mean x: 1748995486.072231
[2025-06-04 01:22:15] 2025-06-04 05:21:52,594 | INFO     | mean y: 2078768.8282504012
[2025-06-04 01:22:15] 2025-06-04 05:21:52,594 | INFO     | -- intersect: 2830580828.2496824
[2025-06-04 01:22:15] 2025-06-04 05:21:52,594 | INFO     | intersect: 2830580828.2496824
[2025-06-04 01:22:15] 2025-06-04 05:21:52,595 | INFO     | chi2: 1.5623116516649707
[2025-06-04 01:22:15] 2025-06-04 05:21:52,595 | INFO     | current chi2=1.5623116516649707 (change=39.32566871617112 %)
[2025-06-04 01:22:15] 2025-06-04 05:21:52,596 | INFO     | sum of square deviations: 73187670130.45473
[2025-06-04 01:22:15] 2025-06-04 05:21:52,609 | INFO     | sum of deviations: -167576598632.25583
[2025-06-04 01:22:15] 2025-06-04 05:21:52,610 | INFO     | mean x: 1748995638.5809062
[2025-06-04 01:22:15] 2025-06-04 05:21:52,610 | INFO     | mean y: 2082709.3851132686
[2025-06-04 01:22:15] 2025-06-04 05:21:52,610 | INFO     | -- intersect: 4006729115.174687
[2025-06-04 01:22:15] 2025-06-04 05:21:52,610 | INFO     | intersect: 4006729115.174687
[2025-06-04 01:22:15] 2025-06-04 05:21:52,611 | INFO     | chi2: 1.2369839903463329
[2025-06-04 01:22:15] 2025-06-04 05:21:52,611 | INFO     | current chi2=1.2369839903463329 (change=20.82348044783081 %)
[2025-06-04 01:22:15] 2025-06-04 05:21:52,611 | INFO     | left removable region: 30
[2025-06-04 01:22:15] 2025-06-04 05:21:52,612 | INFO     | sum of square deviations: 65977098102.70321
[2025-06-04 01:22:15] 2025-06-04 05:21:52,625 | INFO     | sum of deviations: -135963676293.86433
[2025-06-04 01:22:15] 2025-06-04 05:21:52,625 | INFO     | mean x: 1748995913.1105528
[2025-06-04 01:22:15] 2025-06-04 05:21:52,625 | INFO     | mean y: 2086383.7403685092
[2025-06-04 01:22:15] 2025-06-04 05:21:52,626 | INFO     | -- intersect: 3606366065.7488704
[2025-06-04 01:22:15] 2025-06-04 05:21:52,626 | INFO     | intersect: 3606366065.7488704
[2025-06-04 01:22:15] 2025-06-04 05:21:52,627 | INFO     | chi2: 0.48738524044886705
[2025-06-04 01:22:15] 2025-06-04 05:21:52,627 | INFO     | -- intersect: 3606366065.7488704
[2025-06-04 01:22:15] 2025-06-04 05:21:52,627 | INFO     | current memory leak: -2.06 B/s (using 597 data points, chi2=0.49)
[2025-06-04 01:22:15] 2025-06-04 05:21:52,628 | INFO     | ..............................
[2025-06-04 01:22:15] 2025-06-04 05:21:52,628 | INFO     | . Timing measurements:
[2025-06-04 01:22:15] 2025-06-04 05:21:52,628 | INFO     | . get job = 0 s
[2025-06-04 01:22:15] 2025-06-04 05:21:52,628 | INFO     | . initial setup = 3 s
[2025-06-04 01:22:15] 2025-06-04 05:21:52,629 | INFO     | . payload setup = 9 s
[2025-06-04 01:22:15] 2025-06-04 05:21:52,629 | INFO     | . stage-in = 0 s
[2025-06-04 01:22:15] 2025-06-04 05:21:52,629 | INFO     | . payload execution = 38587 s
[2025-06-04 01:22:15] 2025-06-04 05:21:52,629 | INFO     | . stage-out = 3 s
[2025-06-04 01:22:15] 2025-06-04 05:21:52,629 | INFO     | . log creation = 0 s
[2025-06-04 01:22:15] 2025-06-04 05:21:52,629 | INFO     | ..............................
[2025-06-04 01:22:15] 2025-06-04 05:21:52,773 | INFO     | 
[2025-06-04 01:22:15] 2025-06-04 05:21:52,773 | INFO     | job summary report
[2025-06-04 01:22:15] 2025-06-04 05:21:52,773 | INFO     | --------------------------------------------------
[2025-06-04 01:22:15] 2025-06-04 05:21:52,773 | INFO     | PanDA job id: 6677734974
[2025-06-04 01:22:15] 2025-06-04 05:21:52,774 | INFO     | task id: 45006595
[2025-06-04 01:22:15] 2025-06-04 05:21:52,774 | INFO     | errors: (none)
[2025-06-04 01:22:15] 2025-06-04 05:21:52,774 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 01:22:15] 2025-06-04 05:21:52,774 | INFO     | pilot state: finished 
[2025-06-04 01:22:15] 2025-06-04 05:21:52,774 | INFO     | transexitcode: 0
[2025-06-04 01:22:15] 2025-06-04 05:21:52,774 | INFO     | exeerrorcode: 0
[2025-06-04 01:22:15] 2025-06-04 05:21:52,774 | INFO     | exeerrordiag: 
[2025-06-04 01:22:15] 2025-06-04 05:21:52,774 | INFO     | exitcode: 0
[2025-06-04 01:22:15] 2025-06-04 05:21:52,774 | INFO     | exitmsg: OK
[2025-06-04 01:22:15] 2025-06-04 05:21:52,775 | INFO     | cpuconsumptiontime: 47856 s
[2025-06-04 01:22:15] 2025-06-04 05:21:52,775 | INFO     | nevents: 400
[2025-06-04 01:22:15] 2025-06-04 05:21:52,775 | INFO     | neventsw: 0
[2025-06-04 01:22:15] 2025-06-04 05:21:52,775 | INFO     | pid: 2778631
[2025-06-04 01:22:15] 2025-06-04 05:21:52,775 | INFO     | pgrp: 2778631
[2025-06-04 01:22:15] 2025-06-04 05:21:52,775 | INFO     | corecount: 8
[2025-06-04 01:22:15] 2025-06-04 05:21:52,775 | INFO     | event service: False
[2025-06-04 01:22:15] 2025-06-04 05:21:52,775 | INFO     | sizes: {0: 2405013, 1: 2405212, 8: 2405418, 12: 2405446, 38600: 2445196, 38604: 2454137, 38605: 2454321, 38627: 2454491}
[2025-06-04 01:22:15] 2025-06-04 05:21:52,776 | INFO     | --------------------------------------------------
[2025-06-04 01:22:15] 2025-06-04 05:21:52,776 | INFO     | 
[2025-06-04 01:22:15] 2025-06-04 05:21:52,776 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-06-04 01:22:15] 2025-06-04 05:21:52,818 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 01:22:15] 2025-06-04 05:21:52,819 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 01:22:15] 2025-06-04 05:21:52,819 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 01:22:15] 2025-06-04 05:21:52,819 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 01:22:15] 2025-06-04 05:21:52,819 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 01:22:15] 2025-06-04 05:21:52,819 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 01:22:15] 2025-06-04 05:21:52,820 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 01:22:15] 2025-06-04 05:21:52,820 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 01:22:15] 2025-06-04 05:21:52,820 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 01:22:15] 2025-06-04 05:21:52,820 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 01:22:15] 2025-06-04 05:21:52,820 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 01:22:15] 2025-06-04 05:21:52,820 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 01:22:15] 2025-06-04 05:21:52,820 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 01:22:15] 2025-06-04 05:21:52,820 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 01:22:15] 2025-06-04 05:21:52,821 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 01:22:15] 2025-06-04 05:21:52,821 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 01:22:15] 2025-06-04 05:21:52,821 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 01:22:15] 2025-06-04 05:21:52,821 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 01:22:15] 2025-06-04 05:21:52,821 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 01:22:15] 2025-06-04 05:21:52,821 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 01:22:15] 2025-06-04 05:21:52,821 | INFO     | job 6677734974 has completed (purged errors)
[2025-06-04 01:22:15] 2025-06-04 05:21:52,822 | INFO     | overall cleanup function is called
[2025-06-04 01:22:15] 2025-06-04 05:21:53,834 | INFO     | --- collectZombieJob: --- 10, [2778631]
[2025-06-04 01:22:15] 2025-06-04 05:21:53,834 | INFO     | zombie collector waiting for pid 2778631
[2025-06-04 01:22:15] 2025-06-04 05:21:53,835 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 01:22:15] 2025-06-04 05:21:53,835 | INFO     | collected zombie processes
[2025-06-04 01:22:15] 2025-06-04 05:21:53,835 | INFO     | will attempt to kill all subprocesses of pid=2778631
[2025-06-04 01:22:15] 2025-06-04 05:21:54,607 | INFO     | process IDs to be killed: [2778631] (in reverse order)
[2025-06-04 01:22:15] 2025-06-04 05:21:54,846 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 01:22:15] 2025-06-04 05:21:54,846 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 01:22:15] 2025-06-04 05:21:54,865 | INFO     | did not find any defunct processes belonging to 2778631
[2025-06-04 01:22:15] 2025-06-04 05:21:54,883 | INFO     | did not find any defunct processes belonging to 2778631
[2025-06-04 01:22:15] 2025-06-04 05:21:54,884 | INFO     | ready for new job
[2025-06-04 01:22:15] 2025-06-04 05:21:54,884 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 01:22:15] 2025-06-04 05:21:54,887 | INFO     | **************************************
[2025-06-04 01:22:15] 2025-06-04 05:21:54,887 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 01:22:15] 2025-06-04 05:21:54,887 | INFO     | **************************************
[2025-06-04 01:22:15] 2025-06-04 05:21:54,887 | INFO     | 
[2025-06-04 01:22:15] 2025-06-04 05:21:54,890 | INFO     | architecture information:
[2025-06-04 01:22:15] 2025-06-04 05:21:54,892 | INFO     | executing command: cat /etc/os-release
[2025-06-04 01:22:15] 2025-06-04 05:21:54,939 | INFO     | cat /etc/os-release:
[2025-06-04 01:22:15] NAME="CentOS Linux"
[2025-06-04 01:22:15] VERSION="7 (Core)"
[2025-06-04 01:22:15] ID="centos"
[2025-06-04 01:22:15] ID_LIKE="rhel fedora"
[2025-06-04 01:22:15] VERSION_ID="7"
[2025-06-04 01:22:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 01:22:15] ANSI_COLOR="0;31"
[2025-06-04 01:22:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 01:22:15] HOME_URL="https://www.centos.org/"
[2025-06-04 01:22:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 01:22:15] 
[2025-06-04 01:22:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 01:22:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 01:22:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 01:22:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 01:22:15] 
[2025-06-04 01:22:15] 2025-06-04 05:21:54,940 | INFO     | **************************************
[2025-06-04 01:22:15] 2025-06-04 05:21:55,443 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-06-04 01:22:15] 2025-06-04 05:21:55,504 | INFO     | sufficient remaining disk space (63958941696 B)
[2025-06-04 01:22:15] 2025-06-04 05:21:55,504 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 01:22:15] 2025-06-04 05:21:55,504 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 01:22:15] 2025-06-04 05:21:55,504 | INFO     | update_server=False
[2025-06-04 01:22:15] 2025-06-04 05:21:55,505 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 01:22:15] 2025-06-04 05:21:55,505 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:22:15] 2025-06-04 05:21:55,505 | INFO     | aborting loop
[2025-06-04 01:22:15] 2025-06-04 05:21:55,505 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 01:22:15] 2025-06-04 05:21:56,065 | INFO     | all data control threads have been joined
[2025-06-04 01:22:15] 2025-06-04 05:21:56,163 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 01:22:15] 2025-06-04 05:21:56,259 | INFO     | all payload control threads have been joined
[2025-06-04 01:22:15] 2025-06-04 05:21:56,387 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 01:22:15] 2025-06-04 05:21:56,387 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 01:22:15] 2025-06-04 05:21:56,447 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 01:22:15] 2025-06-04 05:21:56,511 | INFO     | [job] retrieve thread has finished
[2025-06-04 01:22:15] 2025-06-04 05:21:56,513 | INFO     | [job] job monitor thread has finished
[2025-06-04 01:22:15] 2025-06-04 05:21:56,776 | INFO     | all job control threads have been joined
[2025-06-04 01:22:15] 2025-06-04 05:21:56,864 | INFO     | [payload] validate_post thread has finished
[2025-06-04 01:22:15] 2025-06-04 05:21:57,071 | INFO     | [data] control thread has finished
[2025-06-04 01:22:15] 2025-06-04 05:21:57,265 | INFO     | [payload] control thread has finished
[2025-06-04 01:22:15] 2025-06-04 05:21:57,348 | INFO     | [payload] failed_post thread has finished
[2025-06-04 01:22:15] 2025-06-04 05:21:57,551 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 01:22:15] 2025-06-04 05:21:57,586 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 01:22:15] 2025-06-04 05:21:57,587 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 01:22:15] 2025-06-04 05:21:57,724 | INFO     | [job] validate thread has finished
[2025-06-04 01:22:15] 2025-06-04 05:21:57,782 | INFO     | [job] control thread has finished
[2025-06-04 01:22:15] 2025-06-04 05:21:57,793 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:22:15] 2025-06-04 05:21:57,884 | INFO     | [data] copytool_in thread has finished
[2025-06-04 01:22:15] 2025-06-04 05:21:58,170 | INFO     | [data] copytool_out thread has finished
[2025-06-04 01:22:15] 2025-06-04 05:21:58,799 | INFO     | [job] queue monitor thread has finished
[2025-06-04 01:22:15] 2025-06-04 05:21:59,521 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 01:22:15] 2025-06-04 05:22:05,996 | INFO     | job.realtimelogging is not enabled
[2025-06-04 01:22:15] 2025-06-04 05:22:07,002 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 01:22:15] 2025-06-04 05:22:08,974 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140557853026112)>', '<ExcThread(monitor, started 140557368162048)>']
[2025-06-04 01:22:15] 2025-06-04 05:22:09,557 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 01:22:15] 2025-06-04 05:22:09,558 | INFO     | [monitor] control thread has ended
[2025-06-04 01:22:15] 2025-06-04 05:22:14,006 | INFO     | all workflow threads have been joined
[2025-06-04 01:22:15] 2025-06-04 05:22:14,022 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 01:22:15] 2025-06-04 05:22:14,023 | INFO     | traces error code: 0
[2025-06-04 01:22:15] 2025-06-04 05:22:14,023 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 01:22:15] 2025-06-04 05:22:14,198 [wrapper] ==== pilot stdout END ====
[2025-06-04 01:22:15] 2025-06-04 05:22:14,206 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 01:22:15] 2025-06-04 05:22:14,222 [wrapper] pilotpid: 2765229
[2025-06-04 01:22:15] 2025-06-04 05:22:14,250 [wrapper] Pilot exit status: 0
[2025-06-04 01:22:15] 2025-06-04 05:22:14,354 [wrapper] pandaids: 6677734974
[2025-06-04 01:22:15] 2025-06-04 05:22:14,763 [wrapper] cleanup supervisor_pilot 1147114 2765230
[2025-06-04 01:22:15] 2025-06-04 05:22:14,793 [wrapper] Test setup, not cleaning
[2025-06-04 01:22:15] 2025-06-04 05:22:14,818 [wrapper] apfmon messages muted
[2025-06-04 01:22:15] 2025-06-04 05:22:14,861 [wrapper] ==== wrapper stdout END ====
[2025-06-04 01:22:15] 2025-06-04 05:22:14,908 [wrapper] ==== wrapper stderr END ====
[2025-06-04 01:22:15]  *** Error codes and diagnostics ***
[2025-06-04 01:22:15]     "exeErrorCode": 0,
[2025-06-04 01:22:15]     "exeErrorDiag": "",
[2025-06-04 01:22:15]     "pilotErrorCode": 0,
[2025-06-04 01:22:15]     "pilotErrorDiag": "",
[2025-06-04 01:22:15]  *** Listing of results directory ***
[2025-06-04 01:22:15] total 395008
[2025-06-04 01:22:15] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 12:03 pilot3.tar.gz
[2025-06-04 01:22:15] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 12:08 queuedata.json
[2025-06-04 01:22:15] -rwx------. 1 boincer umatlas     37140 Jun  3 12:08 runpilot2-wrapper.sh
[2025-06-04 01:22:15] -rw-r--r--. 1 boincer umatlas       100 Jun  3 14:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 01:22:15] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 14:37 run_atlas
[2025-06-04 01:22:15] -rw-r--r--. 1 boincer umatlas       105 Jun  3 14:37 job.xml
[2025-06-04 01:22:15] -rw-r--r--. 2 boincer umatlas 213835981 Jun  3 14:37 EVNT.45006593._001527.pool.root.1
[2025-06-04 01:22:15] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 14:37 start_atlas.sh
[2025-06-04 01:22:15] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 14:37 shared
[2025-06-04 01:22:15] -rw-r--r--. 2 boincer umatlas    508885 Jun  3 14:37 input.tar.gz
[2025-06-04 01:22:15] -rw-r--r--. 1 boincer umatlas         0 Jun  3 14:37 boinc_lockfile
[2025-06-04 01:22:15] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 14:37 pandaJob.out
[2025-06-04 01:22:15] -rw-------. 1 boincer umatlas    986893 Jun  3 14:37 agis_schedconf.cvmfs.json
[2025-06-04 01:22:15] drwx------. 4 boincer umatlas      4096 Jun  3 14:37 pilot3
[2025-06-04 01:22:15] -rw-r--r--. 1 boincer umatlas      6612 Jun  4 01:19 init_data.xml
[2025-06-04 01:22:15] -rw-------. 1 boincer umatlas 180647674 Jun  4 01:20 HITS.45006595._038052.pool.root.1
[2025-06-04 01:22:15] -rw-r--r--. 1 boincer umatlas       530 Jun  4 01:20 boinc_task_state.xml
[2025-06-04 01:22:15] -rw-------. 1 boincer umatlas      1041 Jun  4 01:21 memory_monitor_summary.json
[2025-06-04 01:22:15] -rw-------. 1 boincer umatlas   1603667 Jun  4 01:21 agis_ddmendpoints.agis.ALL.json
[2025-06-04 01:22:15] -rw-------. 1 boincer umatlas    574321 Jun  4 01:21 log.45006595._038052.job.log.tgz.1
[2025-06-04 01:22:15] -rw-------. 1 boincer umatlas      7721 Jun  4 01:21 heartbeat.json
[2025-06-04 01:22:15] -rw-------. 1 boincer umatlas        95 Jun  4 01:21 pilot_heartbeat.json
[2025-06-04 01:22:15] -rw-r--r--. 1 boincer umatlas        27 Jun  4 01:22 wrapper_checkpoint.txt
[2025-06-04 01:22:15] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 01:22 boinc_mmap_file
[2025-06-04 01:22:15] -rw-------. 1 boincer umatlas      4425 Jun  4 01:22 pilotlog.txt
[2025-06-04 01:22:15] -rw-------. 1 boincer umatlas   2508617 Jun  4 01:22 log.45006595._038052.job.log.1
[2025-06-04 01:22:15] -rw-------. 1 boincer umatlas       357 Jun  4 01:22 output.list
[2025-06-04 01:22:15] -rw-r--r--. 1 boincer umatlas       620 Jun  4 01:22 runtime_log
[2025-06-04 01:22:15] -rw-------. 1 boincer umatlas   3102720 Jun  4 01:22 result.tar.gz
[2025-06-04 01:22:15] -rw-r--r--. 1 boincer umatlas      8655 Jun  4 01:22 runtime_log.err
[2025-06-04 01:22:15] -rw-------. 1 boincer umatlas       656 Jun  4 01:22 KPNMDm9Mjg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmoBZKDm3ZpdFm.diag
[2025-06-04 01:22:15] -rw-r--r--. 1 boincer umatlas     20896 Jun  4 01:22 stderr.txt
[2025-06-04 01:22:15] HITS file was successfully produced:
[2025-06-04 01:22:15] -rw-------. 1 boincer umatlas 180647674 Jun  4 01:20 shared/HITS.pool.root.1
[2025-06-04 01:22:15]  *** Contents of shared directory: ***
[2025-06-04 01:22:15] total 388796
[2025-06-04 01:22:15] -rw-r--r--. 2 boincer umatlas 213835981 Jun  3 14:37 ATLAS.root_0
[2025-06-04 01:22:15] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 14:37 start_atlas.sh
[2025-06-04 01:22:15] -rw-r--r--. 2 boincer umatlas    508885 Jun  3 14:37 input.tar.gz
[2025-06-04 01:22:15] -rw-------. 1 boincer umatlas 180647674 Jun  4 01:20 HITS.pool.root.1
[2025-06-04 01:22:15] -rw-------. 1 boincer umatlas   3102720 Jun  4 01:22 result.tar.gz
01:22:17 (2758260): run_atlas exited; CPU time 49775.092996
01:22:17 (2758260): called boinc_finish(0)

</stderr_txt>
]]>

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