Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:28:31 (23283): wrapper (7.7.26015): starting
05:28:31 (23283): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 05:28:31] Arguments: --nthreads 8
[2025-06-04 05:28:31] Threads: 8
[2025-06-04 05:28:31] Checking for CVMFS
[2025-06-04 05:28:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 05:28:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 05:28:31] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 05:28:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 05:28:32] 2.11.2.0 14372 32656 99612 146766 3 209 13303977 25165824 3796 130560 0 16863081 99.819 19512332 2181 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 05:28:32] CVMFS is ok
[2025-06-04 05:28:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 05:28:32] Checking for apptainer binary...
[2025-06-04 05:28:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 05:28:32] Running /usr/bin/apptainer --version
[2025-06-04 05:28:32] apptainer version 1.3.2-1.el7
[2025-06-04 05:28:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 05:28:33] cg-vwn440.simple-grid.lan
[2025-06-04 05:28:33] apptainer works
[2025-06-04 05:28:33] Set ATHENA_PROC_NUMBER=8
[2025-06-04 05:28:33] Set ATHENA_CORE_NUMBER=8
[2025-06-04 05:28:33] Starting ATLAS job with PandaID=6677676348
[2025-06-04 05:28:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/31 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:06:04]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:06:04] 2025-06-04 07:11:19,973 | INFO     | using path: /var/lib/boinc/slots/31/PanDA_Pilot-6677676348/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:06:04] 2025-06-04 07:11:19,973 | INFO     | extracted standard info from prmon json
[2025-06-04 10:06:04] 2025-06-04 07:11:19,974 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:06:04] 2025-06-04 07:11:19,974 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:06:04] 2025-06-04 07:11:19,974 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:06:04] 2025-06-04 07:11:19,974 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:06:04] 2025-06-04 07:11:19,979 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:06:04] 2025-06-04 07:11:19,984 | INFO     | sum of square deviations: 3124858590.0
[2025-06-04 10:06:04] 2025-06-04 07:11:19,986 | INFO     | sum of deviations: 1533477962.9999905
[2025-06-04 10:06:04] 2025-06-04 07:11:19,987 | INFO     | mean x: 1749014380.5
[2025-06-04 10:06:04] 2025-06-04 07:11:19,987 | INFO     | mean y: 2471044.4166666665
[2025-06-04 10:06:04] 2025-06-04 07:11:19,987 | INFO     | -- intersect: -855831797.8462949
[2025-06-04 10:06:04] 2025-06-04 07:11:19,987 | INFO     | intersect: -855831797.8462949
[2025-06-04 10:06:04] 2025-06-04 07:11:19,987 | INFO     | chi2: 2.526449531449494
[2025-06-04 10:06:04] 2025-06-04 07:11:19,988 | INFO     | sum of square deviations: 2912836010.0
[2025-06-04 10:06:04] 2025-06-04 07:11:19,990 | INFO     | sum of deviations: 15531903691.999998
[2025-06-04 10:06:04] 2025-06-04 07:11:19,990 | INFO     | mean x: 1749014228.0
[2025-06-04 10:06:04] 2025-06-04 07:11:19,990 | INFO     | mean y: 2480921.2369668246
[2025-06-04 10:06:04] 2025-06-04 07:11:19,990 | INFO     | -- intersect: -9323660492.825586
[2025-06-04 10:06:04] 2025-06-04 07:11:19,990 | INFO     | intersect: -9323660492.825586
[2025-06-04 10:06:04] 2025-06-04 07:11:19,991 | INFO     | chi2: 1.7613594620931035
[2025-06-04 10:06:04] 2025-06-04 07:11:19,991 | INFO     | current chi2=1.7613594620931035 (change=30.283212066280118 %)
[2025-06-04 10:06:04] 2025-06-04 07:11:19,991 | INFO     | sum of square deviations: 2710627567.5
[2025-06-04 10:06:04] 2025-06-04 07:11:19,993 | INFO     | sum of deviations: 15073970347.999994
[2025-06-04 10:06:04] 2025-06-04 07:11:19,993 | INFO     | mean x: 1749014075.5
[2025-06-04 10:06:04] 2025-06-04 07:11:19,993 | INFO     | mean y: 2480575.8155339807
[2025-06-04 10:06:04] 2025-06-04 07:11:19,993 | INFO     | -- intersect: -9723896676.607073
[2025-06-04 10:06:04] 2025-06-04 07:11:19,994 | INFO     | intersect: -9723896676.607073
[2025-06-04 10:06:04] 2025-06-04 07:11:19,994 | INFO     | chi2: 1.7623457439571073
[2025-06-04 10:06:04] 2025-06-04 07:11:19,994 | INFO     | current chi2=1.7623457439571073 (change=-0.05599549014440258 %)
[2025-06-04 10:06:04] 2025-06-04 07:11:19,994 | INFO     | right removable region: 205
[2025-06-04 10:06:04] 2025-06-04 07:11:19,995 | INFO     | sum of square deviations: 2912836010.0
[2025-06-04 10:06:04] 2025-06-04 07:11:20,002 | INFO     | sum of deviations: -34949736804.99999
[2025-06-04 10:06:04] 2025-06-04 07:11:20,002 | INFO     | mean x: 1749014533.0
[2025-06-04 10:06:04] 2025-06-04 07:11:20,002 | INFO     | mean y: 2497047.55450237
[2025-06-04 10:06:04] 2025-06-04 07:11:20,002 | INFO     | -- intersect: 20988092318.49115
[2025-06-04 10:06:04] 2025-06-04 07:11:20,002 | INFO     | intersect: 20988092318.49115
[2025-06-04 10:06:04] 2025-06-04 07:11:20,003 | INFO     | chi2: 0.9262525050405473
[2025-06-04 10:06:04] 2025-06-04 07:11:20,003 | INFO     | current chi2=0.9262525050405473 (change=63.33777922295837 %)
[2025-06-04 10:06:04] 2025-06-04 07:11:20,003 | INFO     | sum of square deviations: 2710627567.5
[2025-06-04 10:06:04] 2025-06-04 07:11:20,005 | INFO     | sum of deviations: -29872371274.5
[2025-06-04 10:06:04] 2025-06-04 07:11:20,005 | INFO     | mean x: 1749014685.5
[2025-06-04 10:06:04] 2025-06-04 07:11:20,005 | INFO     | mean y: 2493186.9368932038
[2025-06-04 10:06:04] 2025-06-04 07:11:20,005 | INFO     | -- intersect: 19277445111.81392
[2025-06-04 10:06:04] 2025-06-04 07:11:20,006 | INFO     | intersect: 19277445111.81392
[2025-06-04 10:06:04] 2025-06-04 07:11:20,006 | INFO     | chi2: 0.9069569121827148
[2025-06-04 10:06:04] 2025-06-04 07:11:20,006 | INFO     | current chi2=0.9069569121827148 (change=2.0831892764476656 %)
[2025-06-04 10:06:04] 2025-06-04 07:11:20,006 | INFO     | left removable region: 20
[2025-06-04 10:06:04] 2025-06-04 07:11:20,007 | INFO     | sum of square deviations: 1963274020.0
[2025-06-04 10:06:04] 2025-06-04 07:11:20,008 | INFO     | sum of deviations: -353375195.99999875
[2025-06-04 10:06:04] 2025-06-04 07:11:20,008 | INFO     | mean x: 1749014655.0
[2025-06-04 10:06:04] 2025-06-04 07:11:20,008 | INFO     | mean y: 2490631.275675676
[2025-06-04 10:06:04] 2025-06-04 07:11:20,008 | INFO     | -- intersect: 317300683.3729856
[2025-06-04 10:06:04] 2025-06-04 07:11:20,009 | INFO     | intersect: 317300683.3729856
[2025-06-04 10:06:04] 2025-06-04 07:11:20,009 | INFO     | chi2: 0.027182266798579588
[2025-06-04 10:06:04] 2025-06-04 07:11:20,009 | INFO     | -- intersect: 317300683.3729856
[2025-06-04 10:06:04] 2025-06-04 07:11:20,009 | INFO     | current memory leak: -0.18 B/s (using 185 data points, chi2=0.03)
[2025-06-04 10:06:04] 2025-06-04 07:11:20,010 | INFO     | ..............................
[2025-06-04 10:06:04] 2025-06-04 07:11:20,010 | INFO     | . Timing measurements:
[2025-06-04 10:06:04] 2025-06-04 07:11:20,010 | INFO     | . get job = 0 s
[2025-06-04 10:06:04] 2025-06-04 07:11:20,010 | INFO     | . initial setup = 2 s
[2025-06-04 10:06:04] 2025-06-04 07:11:20,011 | INFO     | . payload setup = 16 s
[2025-06-04 10:06:04] 2025-06-04 07:11:20,011 | INFO     | . stage-in = 0 s
[2025-06-04 10:06:04] 2025-06-04 07:11:20,011 | INFO     | . payload execution = 13194 s
[2025-06-04 10:06:04] 2025-06-04 07:11:20,011 | INFO     | . stage-out = 4 s
[2025-06-04 10:06:04] 2025-06-04 07:11:20,011 | INFO     | . log creation = 1 s
[2025-06-04 10:06:04] 2025-06-04 07:11:20,019 | INFO     | ..............................
[2025-06-04 10:06:04] 2025-06-04 07:11:20,204 | INFO     | 
[2025-06-04 10:06:04] 2025-06-04 07:11:20,205 | INFO     | job summary report
[2025-06-04 10:06:04] 2025-06-04 07:11:20,205 | INFO     | --------------------------------------------------
[2025-06-04 10:06:04] 2025-06-04 07:11:20,205 | INFO     | PanDA job id: 6677676348
[2025-06-04 10:06:04] 2025-06-04 07:11:20,205 | INFO     | task id: 45006595
[2025-06-04 10:06:04] 2025-06-04 07:11:20,205 | INFO     | errors: (none)
[2025-06-04 10:06:04] 2025-06-04 07:11:20,205 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:06:04] 2025-06-04 07:11:20,205 | INFO     | pilot state: finished 
[2025-06-04 10:06:04] 2025-06-04 07:11:20,205 | INFO     | transexitcode: 0
[2025-06-04 10:06:04] 2025-06-04 07:11:20,205 | INFO     | exeerrorcode: 0
[2025-06-04 10:06:04] 2025-06-04 07:11:20,205 | INFO     | exeerrordiag: 
[2025-06-04 10:06:04] 2025-06-04 07:11:20,205 | INFO     | exitcode: 0
[2025-06-04 10:06:04] 2025-06-04 07:11:20,206 | INFO     | exitmsg: OK
[2025-06-04 10:06:04] 2025-06-04 07:11:20,206 | INFO     | cpuconsumptiontime: 49993 s
[2025-06-04 10:06:04] 2025-06-04 07:11:20,206 | INFO     | nevents: 400
[2025-06-04 10:06:04] 2025-06-04 07:11:20,206 | INFO     | neventsw: 0
[2025-06-04 10:06:04] 2025-06-04 07:11:20,206 | INFO     | pid: 6016
[2025-06-04 10:06:04] 2025-06-04 07:11:20,206 | INFO     | pgrp: 6016
[2025-06-04 10:06:04] 2025-06-04 07:11:20,206 | INFO     | corecount: 8
[2025-06-04 10:06:04] 2025-06-04 07:11:20,206 | INFO     | event service: False
[2025-06-04 10:06:04] 2025-06-04 07:11:20,206 | INFO     | sizes: {0: 2405014, 1: 2405213, 11: 2405419, 12: 2405447, 13215: 2434998, 13220: 2443941, 13223: 2444125, 13313: 2444295}
[2025-06-04 10:06:04] 2025-06-04 07:11:20,206 | INFO     | --------------------------------------------------
[2025-06-04 10:06:04] 2025-06-04 07:11:20,206 | INFO     | 
[2025-06-04 10:06:04] 2025-06-04 07:11:20,207 | INFO     | executing command: ls -lF /var/lib/boinc/slots/31
[2025-06-04 10:06:04] 2025-06-04 07:11:20,551 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:06:04] 2025-06-04 07:11:20,551 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:06:04] 2025-06-04 07:11:20,551 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:06:04] 2025-06-04 07:11:20,551 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:06:04] 2025-06-04 07:11:20,551 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:06:04] 2025-06-04 07:11:20,552 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:06:04] 2025-06-04 07:11:20,552 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:06:04] 2025-06-04 07:11:20,552 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:06:04] 2025-06-04 07:11:20,552 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:06:04] 2025-06-04 07:11:20,552 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:06:04] 2025-06-04 07:11:20,552 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:06:04] 2025-06-04 07:11:20,552 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:06:04] 2025-06-04 07:11:20,552 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:06:04] 2025-06-04 07:11:20,552 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:06:04] 2025-06-04 07:11:20,552 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:06:04] 2025-06-04 07:11:20,552 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:06:04] 2025-06-04 07:11:20,552 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:06:04] 2025-06-04 07:11:20,553 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:06:04] 2025-06-04 07:11:20,553 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:06:04] 2025-06-04 07:11:20,553 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:06:04] 2025-06-04 07:11:20,553 | INFO     | job 6677676348 has completed (purged errors)
[2025-06-04 10:06:04] 2025-06-04 07:11:20,553 | INFO     | overall cleanup function is called
[2025-06-04 10:06:04] 2025-06-04 07:11:21,561 | INFO     | --- collectZombieJob: --- 10, [6016]
[2025-06-04 10:06:04] 2025-06-04 07:11:21,562 | INFO     | zombie collector waiting for pid 6016
[2025-06-04 10:06:04] 2025-06-04 07:11:21,562 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:06:04] 2025-06-04 07:11:21,562 | INFO     | collected zombie processes
[2025-06-04 10:06:04] 2025-06-04 07:11:21,562 | INFO     | will attempt to kill all subprocesses of pid=6016
[2025-06-04 10:06:04] 2025-06-04 07:11:21,672 | INFO     | process IDs to be killed: [6016] (in reverse order)
[2025-06-04 10:06:04] 2025-06-04 07:11:22,516 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:06:04] 2025-06-04 07:11:22,516 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:06:04] 2025-06-04 07:11:22,520 | INFO     | did not find any defunct processes belonging to 6016
[2025-06-04 10:06:04] 2025-06-04 07:11:22,523 | INFO     | did not find any defunct processes belonging to 6016
[2025-06-04 10:06:04] 2025-06-04 07:11:22,523 | INFO     | ready for new job
[2025-06-04 10:06:04] 2025-06-04 07:11:22,523 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:06:04] 2025-06-04 07:11:22,529 | INFO     | **************************************
[2025-06-04 10:06:04] 2025-06-04 07:11:22,529 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:06:04] 2025-06-04 07:11:22,529 | INFO     | **************************************
[2025-06-04 10:06:04] 2025-06-04 07:11:22,529 | INFO     | 
[2025-06-04 10:06:04] 2025-06-04 07:11:22,530 | INFO     | pilot is running in a VM
[2025-06-04 10:06:04] 2025-06-04 07:11:22,530 | INFO     | architecture information:
[2025-06-04 10:06:04] 2025-06-04 07:11:22,546 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:06:04] 2025-06-04 07:11:22,756 | INFO     | cat /etc/os-release:
[2025-06-04 10:06:04] NAME="CentOS Linux"
[2025-06-04 10:06:04] VERSION="7 (Core)"
[2025-06-04 10:06:04] ID="centos"
[2025-06-04 10:06:04] ID_LIKE="rhel fedora"
[2025-06-04 10:06:04] VERSION_ID="7"
[2025-06-04 10:06:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:06:04] ANSI_COLOR="0;31"
[2025-06-04 10:06:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:06:04] HOME_URL="https://www.centos.org/"
[2025-06-04 10:06:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:06:04] 
[2025-06-04 10:06:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:06:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:06:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:06:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:06:04] 
[2025-06-04 10:06:04] 2025-06-04 07:11:22,757 | INFO     | **************************************
[2025-06-04 10:06:04] 2025-06-04 07:11:23,260 | INFO     | executing command: df -mP /var/lib/boinc/slots/31
[2025-06-04 10:06:04] 2025-06-04 07:11:23,518 | INFO     | sufficient remaining disk space (496731422720 B)
[2025-06-04 10:06:04] 2025-06-04 07:11:23,518 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:06:04] 2025-06-04 07:11:23,518 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:06:04] 2025-06-04 07:11:23,519 | INFO     | update_server=False
[2025-06-04 10:06:04] 2025-06-04 07:11:23,519 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:06:04] 2025-06-04 07:11:23,523 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:06:04] 2025-06-04 07:11:23,996 | INFO     | all data control threads have been joined
[2025-06-04 10:06:04] 2025-06-04 07:11:24,053 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:06:04] 2025-06-04 07:11:24,054 | INFO     | aborting loop
[2025-06-04 10:06:04] 2025-06-04 07:11:24,241 | INFO     | all payload control threads have been joined
[2025-06-04 10:06:04] 2025-06-04 07:11:24,322 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:06:04] 2025-06-04 07:11:24,323 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:06:04] 2025-06-04 07:11:24,323 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:06:04] 2025-06-04 07:11:24,527 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:06:04] 2025-06-04 07:11:25,002 | INFO     | [data] control thread has finished
[2025-06-04 10:06:04] 2025-06-04 07:11:25,059 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:06:04] 2025-06-04 07:11:25,159 | INFO     | all job control threads have been joined
[2025-06-04 10:06:04] 2025-06-04 07:11:25,223 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:06:04] 2025-06-04 07:11:25,247 | INFO     | [payload] control thread has finished
[2025-06-04 10:06:04] 2025-06-04 07:11:25,253 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:06:04] 2025-06-04 07:11:25,264 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:06:04] 2025-06-04 07:11:25,530 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:06:04] 2025-06-04 07:11:25,694 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:06:04] 2025-06-04 07:11:25,730 | INFO     | [job] validate thread has finished
[2025-06-04 10:06:04] 2025-06-04 07:11:25,928 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:06:04] 2025-06-04 07:11:26,016 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:06:04] 2025-06-04 07:11:26,023 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:06:04] 2025-06-04 07:11:26,103 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:06:04] 2025-06-04 07:11:26,165 | INFO     | [job] control thread has finished
[2025-06-04 10:06:04] 2025-06-04 07:11:26,228 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:06:04] 2025-06-04 07:11:26,246 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:06:04] 2025-06-04 07:11:30,255 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:06:04] 2025-06-04 07:11:30,411 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139765399344960)>', '<ExcThread(monitor, started 139765097666304)>']
[2025-06-04 10:06:04] 2025-06-04 07:11:31,364 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:06:04] 2025-06-04 07:11:31,365 | INFO     | [monitor] control thread has ended
[2025-06-04 10:06:04] 2025-06-04 07:11:35,437 | INFO     | all workflow threads have been joined
[2025-06-04 10:06:04] 2025-06-04 07:11:35,438 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:06:04] 2025-06-04 07:11:35,438 | INFO     | traces error code: 0
[2025-06-04 10:06:04] 2025-06-04 07:11:35,438 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:06:04] 2025-06-04 07:11:35,959 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:06:04] 2025-06-04 07:11:36,047 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:06:04] 2025-06-04 07:11:36,099 [wrapper] pilotpid: 28941
[2025-06-04 10:06:04] 2025-06-04 07:11:36,147 [wrapper] Pilot exit status: 0
[2025-06-04 10:06:04] 2025-06-04 07:11:36,470 [wrapper] pandaids: 6677676348
[2025-06-04 10:06:04] 2025-06-04 07:11:37,047 [wrapper] cleanup supervisor_pilot 26640 28942
[2025-06-04 10:06:04] 2025-06-04 07:11:37,092 [wrapper] Test setup, not cleaning
[2025-06-04 10:06:04] 2025-06-04 07:11:37,185 [wrapper] apfmon messages muted
[2025-06-04 10:06:04] 2025-06-04 07:11:37,264 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:06:04] 2025-06-04 07:11:37,335 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:06:04]  *** Error codes and diagnostics ***
[2025-06-04 10:06:04]     "exeErrorCode": 0,
[2025-06-04 10:06:04]     "exeErrorDiag": "",
[2025-06-04 10:06:04]     "pilotErrorCode": 0,
[2025-06-04 10:06:04]     "pilotErrorDiag": "",
[2025-06-04 10:06:04]  *** Listing of results directory ***
[2025-06-04 10:06:04] total 388940
[2025-06-04 10:06:04] -rw-r--r--. 1 boinc boinc    495897 Jun  3 16:52 pilot3.tar.gz
[2025-06-04 10:06:04] -rwx------. 1 boinc boinc     37140 Jun  3 17:02 runpilot2-wrapper.sh
[2025-06-04 10:06:04] -rw-r--r--. 1 boinc boinc      5111 Jun  3 17:02 queuedata.json
[2025-06-04 10:06:04] -rw-r--r--. 1 boinc boinc       100 Jun  4 05:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:06:04] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 05:28 run_atlas
[2025-06-04 10:06:04] -rw-r--r--. 1 boinc boinc       105 Jun  4 05:28 job.xml
[2025-06-04 10:06:04] -rw-r--r--. 2 boinc boinc 216446000 Jun  4 05:28 EVNT.45006593._001465.pool.root.1
[2025-06-04 10:06:04] -rw-r--r--. 1 boinc boinc      6393 Jun  4 05:28 init_data.xml
[2025-06-04 10:06:04] -rw-r--r--. 2 boinc boinc     15093 Jun  4 05:28 start_atlas.sh
[2025-06-04 10:06:04] drwxrwx--x. 2 boinc boinc        68 Jun  4 05:28 shared
[2025-06-04 10:06:04] -rw-r--r--. 2 boinc boinc    508879 Jun  4 05:28 input.tar.gz
[2025-06-04 10:06:04] -rw-r--r--. 1 boinc boinc         0 Jun  4 05:28 boinc_lockfile
[2025-06-04 10:06:04] -rw-r--r--. 1 boinc boinc      2525 Jun  4 05:28 pandaJob.out
[2025-06-04 10:06:04] -rw-------. 1 boinc boinc    986077 Jun  4 05:28 agis_schedconf.cvmfs.json
[2025-06-04 10:06:04] drwx------. 4 boinc boinc      4096 Jun  4 05:29 pilot3
[2025-06-04 10:06:04] -rw-------. 1 boinc boinc 174909321 Jun  4 09:08 HITS.45006595._036472.pool.root.1
[2025-06-04 10:06:04] -rw-r--r--. 1 boinc boinc       531 Jun  4 09:08 boinc_task_state.xml
[2025-06-04 10:06:04] -rw-------. 1 boinc boinc      1030 Jun  4 09:09 memory_monitor_summary.json
[2025-06-04 10:06:04] -rw-------. 1 boinc boinc   1603667 Jun  4 09:09 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:06:04] -rw-------. 1 boinc boinc    390590 Jun  4 09:09 log.45006595._036472.job.log.tgz.1
[2025-06-04 10:06:04] -rw-------. 1 boinc boinc        95 Jun  4 09:10 pilot_heartbeat.json
[2025-06-04 10:06:04] -rw-------. 1 boinc boinc      7684 Jun  4 09:11 heartbeat.json
[2025-06-04 10:06:04] -rw-------. 1 boinc boinc      4417 Jun  4 09:11 pilotlog.txt
[2025-06-04 10:06:04] -rw-------. 1 boinc boinc   1155557 Jun  4 09:11 log.45006595._036472.job.log.1
[2025-06-04 10:06:04] -rw-------. 1 boinc boinc       357 Jun  4 09:11 output.list
[2025-06-04 10:06:04] -rw-r--r--. 1 boinc boinc       620 Jun  4 09:11 runtime_log
[2025-06-04 10:06:04] -rw-------. 1 boinc boinc   1566720 Jun  4 09:11 result.tar.gz
[2025-06-04 10:06:04] -rw-r--r--. 1 boinc boinc      8673 Jun  4 09:11 runtime_log.err
[2025-06-04 10:06:04] -rw-------. 1 boinc boinc       656 Jun  4 09:11 0FgMDmOLig7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbjkKDmKOOwjm.diag
[2025-06-04 10:06:04] -rw-r--r--. 1 boinc boinc      8192 Jun  4 10:06 boinc_mmap_file
[2025-06-04 10:06:04] -rw-r--r--. 1 boinc boinc        28 Jun  4 10:06 wrapper_checkpoint.txt
[2025-06-04 10:06:04] -rw-r--r--. 1 boinc boinc     20492 Jun  4 10:06 stderr.txt
[2025-06-04 10:06:04] HITS file was successfully produced:
[2025-06-04 10:06:04] -rw-------. 1 boinc boinc 174909321 Jun  4 09:08 shared/HITS.pool.root.1
[2025-06-04 10:06:04]  *** Contents of shared directory: ***
[2025-06-04 10:06:04] total 384236
[2025-06-04 10:06:04] -rw-r--r--. 2 boinc boinc 216446000 Jun  4 05:28 ATLAS.root_0
[2025-06-04 10:06:04] -rw-r--r--. 2 boinc boinc     15093 Jun  4 05:28 start_atlas.sh
[2025-06-04 10:06:04] -rw-r--r--. 2 boinc boinc    508879 Jun  4 05:28 input.tar.gz
[2025-06-04 10:06:04] -rw-------. 1 boinc boinc 174909321 Jun  4 09:08 HITS.pool.root.1
[2025-06-04 10:06:04] -rw-------. 1 boinc boinc   1566720 Jun  4 09:11 result.tar.gz
10:06:06 (23283): run_atlas exited; CPU time 50165.012614
10:06:06 (23283): called boinc_finish(0)

</stderr_txt>
]]>

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