Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:33:33 (992168): wrapper (7.7.26015): starting
14:33:33 (992168): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 14:33:33] Arguments: --nthreads 8
[2025-06-03 14:33:33] Threads: 8
[2025-06-03 14:33:33] Checking for CVMFS
[2025-06-03 14:33:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 14:33:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 14:33:33] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 14:33:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 14:33:33] 2.12.6.0 1132017 119426 239468 146752 3 194 30391556 32935936 13060 130560 2 385841204 99.634 393657730 23145 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 14:33:33] CVMFS is ok
[2025-06-03 14:33:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 14:33:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 14:33:33] Further information can be found at the LHC@home message board.
[2025-06-03 14:33:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 14:33:33] Checking for apptainer binary...
[2025-06-03 14:33:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 14:33:33] Running /usr/bin/apptainer --version
[2025-06-03 14:33:33] apptainer version 1.4.1-1.el9
[2025-06-03 14:33:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 14:33:34] c-5-5.aglt2.org
[2025-06-03 14:33:34] apptainer works
[2025-06-03 14:33:34] Set ATHENA_PROC_NUMBER=8
[2025-06-03 14:33:34] Set ATHENA_CORE_NUMBER=8
[2025-06-03 14:33:34] Starting ATLAS job with PandaID=6677734378
[2025-06-03 14:33:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 18:25:07]  *** The last 200 lines of the pilot log: ***
[2025-06-03 18:25:07] 2025-06-03 21:53:50,769 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6677734378/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 18:25:07] 2025-06-03 21:53:50,770 | INFO     | extracted standard info from prmon json
[2025-06-03 18:25:07] 2025-06-03 21:53:50,770 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 18:25:07] 2025-06-03 21:53:50,770 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 18:25:07] 2025-06-03 21:53:50,772 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 18:25:07] 2025-06-03 21:53:50,772 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 18:25:07] 2025-06-03 21:53:50,778 | INFO     | fitting pss+swap vs Time
[2025-06-03 18:25:07] 2025-06-03 21:53:50,779 | INFO     | sum of square deviations: 2334551183.2040772
[2025-06-03 18:25:07] 2025-06-03 21:53:50,786 | INFO     | sum of deviations: 32639612093.602005
[2025-06-03 18:25:07] 2025-06-03 21:53:50,787 | INFO     | mean x: 1748981615.2346938
[2025-06-03 18:25:07] 2025-06-03 21:53:50,787 | INFO     | mean y: 2099366.1173469387
[2025-06-03 18:25:07] 2025-06-03 21:53:50,788 | INFO     | -- intersect: -24450601388.874683
[2025-06-03 18:25:07] 2025-06-03 21:53:50,789 | INFO     | intersect: -24450601388.874683
[2025-06-03 18:25:07] 2025-06-03 21:53:50,793 | INFO     | chi2: 4.469653567805285
[2025-06-03 18:25:07] 2025-06-03 21:53:50,794 | INFO     | sum of square deviations: 2160421861.9371657
[2025-06-03 18:25:07] 2025-06-03 21:53:50,798 | INFO     | sum of deviations: 42769354407.570694
[2025-06-03 18:25:07] 2025-06-03 21:53:50,801 | INFO     | mean x: 1748981462.748691
[2025-06-03 18:25:07] 2025-06-03 21:53:50,801 | INFO     | mean y: 2108052.282722513
[2025-06-03 18:25:07] 2025-06-03 21:53:50,802 | INFO     | -- intersect: -34622059269.13913
[2025-06-03 18:25:07] 2025-06-03 21:53:50,802 | INFO     | intersect: -34622059269.13913
[2025-06-03 18:25:07] 2025-06-03 21:53:50,803 | INFO     | chi2: 3.8380291789261314
[2025-06-03 18:25:07] 2025-06-03 21:53:50,803 | INFO     | current chi2=3.8380291789261314 (change=14.13139473333494 %)
[2025-06-03 18:25:07] 2025-06-03 21:53:50,803 | INFO     | right removable region: 190
[2025-06-03 18:25:07] 2025-06-03 21:53:50,804 | INFO     | sum of square deviations: 2160345855.4345613
[2025-06-03 18:25:07] 2025-06-03 21:53:50,819 | INFO     | sum of deviations: -7737942201.125654
[2025-06-03 18:25:07] 2025-06-03 21:53:50,828 | INFO     | mean x: 1748981767.7539268
[2025-06-03 18:25:07] 2025-06-03 21:53:50,828 | INFO     | mean y: 2134574.167539267
[2025-06-03 18:25:07] 2025-06-03 21:53:50,828 | INFO     | -- intersect: 6266649950.563206
[2025-06-03 18:25:07] 2025-06-03 21:53:50,828 | INFO     | intersect: 6266649950.563206
[2025-06-03 18:25:07] 2025-06-03 21:53:50,828 | INFO     | chi2: 1.96230204226693
[2025-06-03 18:25:07] 2025-06-03 21:53:50,828 | INFO     | current chi2=1.96230204226693 (change=56.097222916753466 %)
[2025-06-03 18:25:07] 2025-06-03 21:53:50,829 | INFO     | sum of square deviations: 1995024415.0161338
[2025-06-03 18:25:07] 2025-06-03 21:53:50,830 | INFO     | sum of deviations: -30665017562.306454
[2025-06-03 18:25:07] 2025-06-03 21:53:50,830 | INFO     | mean x: 1748981920.2741935
[2025-06-03 18:25:07] 2025-06-03 21:53:50,830 | INFO     | mean y: 2155694.123655914
[2025-06-03 18:25:07] 2025-06-03 21:53:50,830 | INFO     | -- intersect: 26885316069.346874
[2025-06-03 18:25:07] 2025-06-03 21:53:50,831 | INFO     | intersect: 26885316069.346874
[2025-06-03 18:25:07] 2025-06-03 21:53:50,836 | INFO     | chi2: 1.1729819680741675
[2025-06-03 18:25:07] 2025-06-03 21:53:50,838 | INFO     | current chi2=1.1729819680741675 (change=40.22418859030021 %)
[2025-06-03 18:25:07] 2025-06-03 21:53:50,838 | INFO     | sum of square deviations: 1838354299.4364643
[2025-06-03 18:25:07] 2025-06-03 21:53:50,839 | INFO     | sum of deviations: -35024750514.13814
[2025-06-03 18:25:07] 2025-06-03 21:53:50,840 | INFO     | mean x: 1748982072.7955801
[2025-06-03 18:25:07] 2025-06-03 21:53:50,840 | INFO     | mean y: 2159852.0773480665
[2025-06-03 18:25:07] 2025-06-03 21:53:50,840 | INFO     | -- intersect: 33324170071.839405
[2025-06-03 18:25:07] 2025-06-03 21:53:50,840 | INFO     | intersect: 33324170071.839405
[2025-06-03 18:25:07] 2025-06-03 21:53:50,840 | INFO     | chi2: 1.0661872585398866
[2025-06-03 18:25:07] 2025-06-03 21:53:50,840 | INFO     | current chi2=1.0661872585398866 (change=9.10454827448194 %)
[2025-06-03 18:25:07] 2025-06-03 21:53:50,840 | INFO     | left removable region: 30
[2025-06-03 18:25:07] 2025-06-03 21:53:50,843 | INFO     | sum of square deviations: 1269852540.9750032
[2025-06-03 18:25:07] 2025-06-03 21:53:50,850 | INFO     | sum of deviations: -4775192934.074994
[2025-06-03 18:25:07] 2025-06-03 21:53:50,850 | INFO     | mean x: 1748982347.2625
[2025-06-03 18:25:07] 2025-06-03 21:53:50,850 | INFO     | mean y: 2148411.7875
[2025-06-03 18:25:07] 2025-06-03 21:53:50,850 | INFO     | -- intersect: 6579075950.206459
[2025-06-03 18:25:07] 2025-06-03 21:53:50,850 | INFO     | intersect: 6579075950.206459
[2025-06-03 18:25:07] 2025-06-03 21:53:50,851 | INFO     | chi2: 0.2722039214252558
[2025-06-03 18:25:07] 2025-06-03 21:53:50,851 | INFO     | -- intersect: 6579075950.206459
[2025-06-03 18:25:07] 2025-06-03 21:53:50,851 | INFO     | current memory leak: -3.76 B/s (using 160 data points, chi2=0.27)
[2025-06-03 18:25:07] 2025-06-03 21:53:50,853 | INFO     | ..............................
[2025-06-03 18:25:07] 2025-06-03 21:53:50,854 | INFO     | . Timing measurements:
[2025-06-03 18:25:07] 2025-06-03 21:53:50,854 | INFO     | . get job = 0 s
[2025-06-03 18:25:07] 2025-06-03 21:53:50,854 | INFO     | . initial setup = 3 s
[2025-06-03 18:25:07] 2025-06-03 21:53:50,854 | INFO     | . payload setup = 10 s
[2025-06-03 18:25:07] 2025-06-03 21:53:50,854 | INFO     | . stage-in = 0 s
[2025-06-03 18:25:07] 2025-06-03 21:53:50,854 | INFO     | . payload execution = 11926 s
[2025-06-03 18:25:07] 2025-06-03 21:53:50,855 | INFO     | . stage-out = 7 s
[2025-06-03 18:25:07] 2025-06-03 21:53:50,855 | INFO     | . log creation = 2 s
[2025-06-03 18:25:07] 2025-06-03 21:53:50,855 | INFO     | ..............................
[2025-06-03 18:25:07] 2025-06-03 21:53:51,359 | INFO     | 
[2025-06-03 18:25:07] 2025-06-03 21:53:51,359 | INFO     | job summary report
[2025-06-03 18:25:07] 2025-06-03 21:53:51,359 | INFO     | --------------------------------------------------
[2025-06-03 18:25:07] 2025-06-03 21:53:51,359 | INFO     | PanDA job id: 6677734378
[2025-06-03 18:25:07] 2025-06-03 21:53:51,359 | INFO     | task id: 45006595
[2025-06-03 18:25:07] 2025-06-03 21:53:51,370 | INFO     | errors: (none)
[2025-06-03 18:25:07] 2025-06-03 21:53:51,370 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 18:25:07] 2025-06-03 21:53:51,370 | INFO     | pilot state: finished 
[2025-06-03 18:25:07] 2025-06-03 21:53:51,370 | INFO     | transexitcode: 0
[2025-06-03 18:25:07] 2025-06-03 21:53:51,370 | INFO     | exeerrorcode: 0
[2025-06-03 18:25:07] 2025-06-03 21:53:51,371 | INFO     | exeerrordiag: 
[2025-06-03 18:25:07] 2025-06-03 21:53:51,371 | INFO     | exitcode: 0
[2025-06-03 18:25:07] 2025-06-03 21:53:51,371 | INFO     | exitmsg: OK
[2025-06-03 18:25:07] 2025-06-03 21:53:51,371 | INFO     | cpuconsumptiontime: 43500 s
[2025-06-03 18:25:07] 2025-06-03 21:53:51,371 | INFO     | nevents: 400
[2025-06-03 18:25:07] 2025-06-03 21:53:51,371 | INFO     | neventsw: 0
[2025-06-03 18:25:07] 2025-06-03 21:53:51,371 | INFO     | pid: 1006943
[2025-06-03 18:25:07] 2025-06-03 21:53:51,371 | INFO     | pgrp: 1006943
[2025-06-03 18:25:07] 2025-06-03 21:53:51,371 | INFO     | corecount: 8
[2025-06-03 18:25:07] 2025-06-03 21:53:51,371 | INFO     | event service: False
[2025-06-03 18:25:07] 2025-06-03 21:53:51,371 | INFO     | sizes: {0: 2405011, 1: 2405210, 10: 2405416, 12: 2405444, 11940: 2434575, 11949: 2443516, 11951: 2443700, 11981: 2443870}
[2025-06-03 18:25:07] 2025-06-03 21:53:51,372 | INFO     | --------------------------------------------------
[2025-06-03 18:25:07] 2025-06-03 21:53:51,372 | INFO     | 
[2025-06-03 18:25:07] 2025-06-03 21:53:51,372 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-06-03 18:25:07] 2025-06-03 21:53:51,444 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 18:25:07] 2025-06-03 21:53:51,445 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 18:25:07] 2025-06-03 21:53:51,445 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 18:25:07] 2025-06-03 21:53:51,445 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 18:25:07] 2025-06-03 21:53:51,445 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 18:25:07] 2025-06-03 21:53:51,445 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 18:25:07] 2025-06-03 21:53:51,445 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 18:25:07] 2025-06-03 21:53:51,445 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 18:25:07] 2025-06-03 21:53:51,445 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 18:25:07] 2025-06-03 21:53:51,446 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 18:25:07] 2025-06-03 21:53:51,446 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 18:25:07] 2025-06-03 21:53:51,446 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 18:25:07] 2025-06-03 21:53:51,446 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 18:25:07] 2025-06-03 21:53:51,446 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 18:25:07] 2025-06-03 21:53:51,446 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 18:25:07] 2025-06-03 21:53:51,446 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 18:25:07] 2025-06-03 21:53:51,446 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 18:25:07] 2025-06-03 21:53:51,447 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 18:25:07] 2025-06-03 21:53:51,447 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 18:25:07] 2025-06-03 21:53:51,447 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 18:25:07] 2025-06-03 21:53:51,447 | INFO     | job 6677734378 has completed (purged errors)
[2025-06-03 18:25:07] 2025-06-03 21:53:51,447 | INFO     | overall cleanup function is called
[2025-06-03 18:25:07] 2025-06-03 21:53:52,482 | INFO     | --- collectZombieJob: --- 10, [1006943]
[2025-06-03 18:25:07] 2025-06-03 21:53:52,482 | INFO     | zombie collector waiting for pid 1006943
[2025-06-03 18:25:07] 2025-06-03 21:53:52,482 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 18:25:07] 2025-06-03 21:53:52,482 | INFO     | collected zombie processes
[2025-06-03 18:25:07] 2025-06-03 21:53:52,483 | INFO     | will attempt to kill all subprocesses of pid=1006943
[2025-06-03 18:25:07] 2025-06-03 21:53:56,039 | INFO     | process IDs to be killed: [1006943] (in reverse order)
[2025-06-03 18:25:07] 2025-06-03 21:53:56,692 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 18:25:07] 2025-06-03 21:53:56,692 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 18:25:07] 2025-06-03 21:53:56,777 | INFO     | did not find any defunct processes belonging to 1006943
[2025-06-03 18:25:07] 2025-06-03 21:53:56,792 | INFO     | did not find any defunct processes belonging to 1006943
[2025-06-03 18:25:07] 2025-06-03 21:53:56,793 | INFO     | ready for new job
[2025-06-03 18:25:07] 2025-06-03 21:53:56,793 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 18:25:07] 2025-06-03 21:53:56,795 | INFO     | **************************************
[2025-06-03 18:25:07] 2025-06-03 21:53:56,795 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 18:25:07] 2025-06-03 21:53:56,795 | INFO     | **************************************
[2025-06-03 18:25:07] 2025-06-03 21:53:56,795 | INFO     | 
[2025-06-03 18:25:07] 2025-06-03 21:53:56,797 | INFO     | architecture information:
[2025-06-03 18:25:07] 2025-06-03 21:53:56,798 | INFO     | executing command: cat /etc/os-release
[2025-06-03 18:25:07] 2025-06-03 21:53:56,841 | INFO     | cat /etc/os-release:
[2025-06-03 18:25:07] NAME="CentOS Linux"
[2025-06-03 18:25:07] VERSION="7 (Core)"
[2025-06-03 18:25:07] ID="centos"
[2025-06-03 18:25:07] ID_LIKE="rhel fedora"
[2025-06-03 18:25:07] VERSION_ID="7"
[2025-06-03 18:25:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 18:25:07] ANSI_COLOR="0;31"
[2025-06-03 18:25:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 18:25:07] HOME_URL="https://www.centos.org/"
[2025-06-03 18:25:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 18:25:07] 
[2025-06-03 18:25:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 18:25:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 18:25:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 18:25:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 18:25:07] 
[2025-06-03 18:25:07] 2025-06-03 21:53:56,844 | INFO     | **************************************
[2025-06-03 18:25:07] 2025-06-03 21:53:57,351 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-06-03 18:25:07] 2025-06-03 21:53:57,382 | INFO     | sufficient remaining disk space (74163683328 B)
[2025-06-03 18:25:07] 2025-06-03 21:53:57,397 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 18:25:07] 2025-06-03 21:53:57,397 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 18:25:07] 2025-06-03 21:53:57,398 | INFO     | update_server=False
[2025-06-03 18:25:07] 2025-06-03 21:53:57,398 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 18:25:07] 2025-06-03 21:53:57,424 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 18:25:07] 2025-06-03 21:53:57,424 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 18:25:07] 2025-06-03 21:53:57,424 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 18:25:07] 2025-06-03 21:53:57,425 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 18:25:07] 2025-06-03 21:53:57,444 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 18:25:07] 2025-06-03 21:53:57,525 | INFO     | all payload control threads have been joined
[2025-06-03 18:25:07] 2025-06-03 21:53:57,737 | INFO     | all data control threads have been joined
[2025-06-03 18:25:07] 2025-06-03 21:53:58,082 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:25:07] 2025-06-03 21:53:58,082 | INFO     | aborting loop
[2025-06-03 18:25:07] 2025-06-03 21:53:58,191 | INFO     | all job control threads have been joined
[2025-06-03 18:25:07] 2025-06-03 21:53:58,411 | INFO     | [job] retrieve thread has finished
[2025-06-03 18:25:07] 2025-06-03 21:53:58,481 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 18:25:07] 2025-06-03 21:53:58,504 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 18:25:07] 2025-06-03 21:53:58,531 | INFO     | [payload] control thread has finished
[2025-06-03 18:25:07] 2025-06-03 21:53:58,743 | INFO     | [data] control thread has finished
[2025-06-03 18:25:07] 2025-06-03 21:53:58,771 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 18:25:07] 2025-06-03 21:53:58,810 | INFO     | [job] validate thread has finished
[2025-06-03 18:25:07] 2025-06-03 21:53:58,820 | INFO     | [data] copytool_in thread has finished
[2025-06-03 18:25:07] 2025-06-03 21:53:58,928 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 18:25:07] 2025-06-03 21:53:59,073 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 18:25:07] 2025-06-03 21:53:59,078 | INFO     | [payload] validate_post thread has finished
[2025-06-03 18:25:07] 2025-06-03 21:53:59,088 | INFO     | [job] job monitor thread has finished
[2025-06-03 18:25:07] 2025-06-03 21:53:59,197 | INFO     | [job] control thread has finished
[2025-06-03 18:25:07] 2025-06-03 21:53:59,425 | INFO     | [payload] failed_post thread has finished
[2025-06-03 18:25:07] 2025-06-03 21:53:59,451 | INFO     | [data] copytool_out thread has finished
[2025-06-03 18:25:07] 2025-06-03 21:54:00,115 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:25:07] 2025-06-03 21:54:01,121 | INFO     | [job] queue monitor thread has finished
[2025-06-03 18:25:07] 2025-06-03 21:54:03,083 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 18:25:07] 2025-06-03 21:54:03,458 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140070094387008)>', '<ExcThread(monitor, started 140069587367680)>']
[2025-06-03 18:25:07] 2025-06-03 21:54:03,461 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 18:25:07] 2025-06-03 21:54:03,462 | INFO     | [monitor] control thread has ended
[2025-06-03 18:25:07] 2025-06-03 21:54:08,487 | INFO     | all workflow threads have been joined
[2025-06-03 18:25:07] 2025-06-03 21:54:08,491 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 18:25:07] 2025-06-03 21:54:08,492 | INFO     | traces error code: 0
[2025-06-03 18:25:07] 2025-06-03 21:54:08,492 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 18:25:07] 2025-06-03 21:54:08,759 [wrapper] ==== pilot stdout END ====
[2025-06-03 18:25:07] 2025-06-03 21:54:08,779 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 18:25:07] 2025-06-03 21:54:08,795 [wrapper] pilotpid: 1000020
[2025-06-03 18:25:07] 2025-06-03 21:54:08,809 [wrapper] Pilot exit status: 0
[2025-06-03 18:25:07] 2025-06-03 21:54:08,936 [wrapper] pandaids: 6677734378
[2025-06-03 18:25:07] 2025-06-03 21:54:09,272 [wrapper] cleanup supervisor_pilot 2951021 1000021
[2025-06-03 18:25:07] 2025-06-03 21:54:09,344 [wrapper] Test setup, not cleaning
[2025-06-03 18:25:07] 2025-06-03 21:54:09,393 [wrapper] apfmon messages muted
[2025-06-03 18:25:07] 2025-06-03 21:54:09,403 [wrapper] ==== wrapper stdout END ====
[2025-06-03 18:25:07] 2025-06-03 21:54:09,416 [wrapper] ==== wrapper stderr END ====
[2025-06-03 18:25:07]  *** Error codes and diagnostics ***
[2025-06-03 18:25:07]     "exeErrorCode": 0,
[2025-06-03 18:25:07]     "exeErrorDiag": "",
[2025-06-03 18:25:07]     "pilotErrorCode": 0,
[2025-06-03 18:25:07]     "pilotErrorDiag": "",
[2025-06-03 18:25:07]  *** Listing of results directory ***
[2025-06-03 18:25:07] total 392132
[2025-06-03 18:25:07] -rwx------. 1 boincer umatlas     37140 Jun  3 12:03 runpilot2-wrapper.sh
[2025-06-03 18:25:07] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 12:03 queuedata.json
[2025-06-03 18:25:07] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 12:03 pilot3.tar.gz
[2025-06-03 18:25:07] -rw-r--r--. 1 boincer umatlas       100 Jun  3 14:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 18:25:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 14:33 run_atlas
[2025-06-03 18:25:07] -rw-r--r--. 1 boincer umatlas       105 Jun  3 14:33 job.xml
[2025-06-03 18:25:07] -rw-r--r--. 2 boincer umatlas 215004029 Jun  3 14:33 EVNT.45006593._001520.pool.root.1
[2025-06-03 18:25:07] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 14:33 start_atlas.sh
[2025-06-03 18:25:07] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 14:33 shared
[2025-06-03 18:25:07] -rw-r--r--. 2 boincer umatlas    508872 Jun  3 14:33 input.tar.gz
[2025-06-03 18:25:07] -rw-r--r--. 1 boincer umatlas         0 Jun  3 14:33 boinc_lockfile
[2025-06-03 18:25:07] -rw-r--r--. 1 boincer umatlas      2524 Jun  3 14:33 pandaJob.out
[2025-06-03 18:25:07] -rw-------. 1 boincer umatlas    986893 Jun  3 14:33 agis_schedconf.cvmfs.json
[2025-06-03 18:25:07] drwx------. 4 boincer umatlas      4096 Jun  3 14:33 pilot3
[2025-06-03 18:25:07] -rw-------. 1 boincer umatlas 179996523 Jun  3 17:52 HITS.45006595._037861.pool.root.1
[2025-06-03 18:25:07] -rw-r--r--. 1 boincer umatlas       529 Jun  3 17:52 boinc_task_state.xml
[2025-06-03 18:25:07] -rw-------. 1 boincer umatlas      1048 Jun  3 17:53 memory_monitor_summary.json
[2025-06-03 18:25:07] -rw-------. 1 boincer umatlas   1603667 Jun  3 17:53 agis_ddmendpoints.agis.ALL.json
[2025-06-03 18:25:07] -rw-------. 1 boincer umatlas    360880 Jun  3 17:53 log.45006595._037861.job.log.tgz.1
[2025-06-03 18:25:07] -rw-------. 1 boincer umatlas        95 Jun  3 17:53 pilot_heartbeat.json
[2025-06-03 18:25:07] -rw-------. 1 boincer umatlas      7733 Jun  3 17:53 heartbeat.json
[2025-06-03 18:25:07] -rw-------. 1 boincer umatlas      4476 Jun  3 17:54 pilotlog.txt
[2025-06-03 18:25:07] -rw-------. 1 boincer umatlas    993277 Jun  3 17:54 log.45006595._037861.job.log.1
[2025-06-03 18:25:07] -rw-------. 1 boincer umatlas       357 Jun  3 17:54 output.list
[2025-06-03 18:25:07] -rw-r--r--. 1 boincer umatlas       620 Jun  3 17:54 runtime_log
[2025-06-03 18:25:07] -rw-------. 1 boincer umatlas   1372160 Jun  3 17:54 result.tar.gz
[2025-06-03 18:25:07] -rw-r--r--. 1 boincer umatlas      8645 Jun  3 17:54 runtime_log.err
[2025-06-03 18:25:07] -rw-------. 1 boincer umatlas       657 Jun  3 17:54 3a8LDm4Hjg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmz9YKDmXlWdYm.diag
[2025-06-03 18:25:07] -rw-r--r--. 1 boincer umatlas      6671 Jun  3 18:20 init_data.xml
[2025-06-03 18:25:07] -rw-r--r--. 1 boincer umatlas        26 Jun  3 18:25 wrapper_checkpoint.txt
[2025-06-03 18:25:07] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 18:25 boinc_mmap_file
[2025-06-03 18:25:07] -rw-r--r--. 1 boincer umatlas     20939 Jun  3 18:25 stderr.txt
[2025-06-03 18:25:07] HITS file was successfully produced:
[2025-06-03 18:25:07] -rw-------. 1 boincer umatlas 179996523 Jun  3 17:52 shared/HITS.pool.root.1
[2025-06-03 18:25:07]  *** Contents of shared directory: ***
[2025-06-03 18:25:07] total 387608
[2025-06-03 18:25:07] -rw-r--r--. 2 boincer umatlas 215004029 Jun  3 14:33 ATLAS.root_0
[2025-06-03 18:25:07] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 14:33 start_atlas.sh
[2025-06-03 18:25:07] -rw-r--r--. 2 boincer umatlas    508872 Jun  3 14:33 input.tar.gz
[2025-06-03 18:25:07] -rw-------. 1 boincer umatlas 179996523 Jun  3 17:52 HITS.pool.root.1
[2025-06-03 18:25:07] -rw-------. 1 boincer umatlas   1372160 Jun  3 17:54 result.tar.gz
18:25:08 (992168): run_atlas exited; CPU time 43960.552177
18:25:08 (992168): called boinc_finish(0)

</stderr_txt>
]]>

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