Name gdFMDmNLjg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeykKDmo405em_1
Workunit 232824700
Created 3 Jun 2025, 17:26:37 UTC
Sent 3 Jun 2025, 18:29:07 UTC
Report deadline 11 Jun 2025, 18:29:07 UTC
Received 4 Jun 2025, 8:02:50 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10856835
Run time 4 hours 11 min 6 sec
CPU time 1 days 11 hours 28 min 38 sec
Validate state Valid
Credit 98.37
Device peak FLOPS 9.22 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.65 GB
Peak swap size 31.65 GB
Peak disk usage 797.76 MB

Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:29:32 (3797426): wrapper (7.7.26015): starting
14:29:32 (3797426): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 14:29:32] Arguments: --nthreads 8
[2025-06-03 14:29:32] Threads: 8
[2025-06-03 14:29:32] Checking for CVMFS
[2025-06-03 14:29:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 14:29:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 14:29:32] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 14:29:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 14:29:33] 2.12.6.0 5779 30327 321500 146752 3 289 16814943 32935936 12506 16776704 3 81651532 99.620 86368591 10222 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 14:29:33] CVMFS is ok
[2025-06-03 14:29:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 14:29:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 14:29:33] Further information can be found at the LHC@home message board.
[2025-06-03 14:29:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 14:29:33] Checking for apptainer binary...
[2025-06-03 14:29:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 14:29:33] Running /usr/bin/apptainer --version
[2025-06-03 14:29:33] apptainer version 1.4.1-1.el9
[2025-06-03 14:29:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 14:29:33] c6-12-25-2.aglt2.org
[2025-06-03 14:29:33] apptainer works
[2025-06-03 14:29:33] Set ATHENA_PROC_NUMBER=8
[2025-06-03 14:29:33] Set ATHENA_CORE_NUMBER=8
[2025-06-03 14:29:33] Starting ATLAS job with PandaID=6677734927
[2025-06-03 14:29:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
16:20:14 (3797426): BOINC client no longer exists - exiting
16:20:14 (3797426): timer handler: client dead, exiting
00:13:40 (3667306): wrapper (7.7.26015): starting
00:13:40 (3667306): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 00:13:40] Arguments: --nthreads 8
[2025-06-04 00:13:40] Threads: 8
[2025-06-04 00:13:40] This job has been restarted, cleaning up previous attempt
[2025-06-04 00:13:40] Checking for CVMFS
[2025-06-04 00:13:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 00:13:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 00:13:40] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 00:13:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 00:13:41] 2.12.6.0 5779 30911 436976 146767 0 525 23585811 32935937 20311 16776704 3 89161388 99.637 88384707 10220 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 00:13:41] CVMFS is ok
[2025-06-04 00:13:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 00:13:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 00:13:41] Further information can be found at the LHC@home message board.
[2025-06-04 00:13:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 00:13:41] Checking for apptainer binary...
[2025-06-04 00:13:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 00:13:41] Running /usr/bin/apptainer --version
[2025-06-04 00:13:41] apptainer version 1.4.1-1.el9
[2025-06-04 00:13:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 00:13:41] c6-12-25-2.aglt2.org
[2025-06-04 00:13:41] apptainer works
[2025-06-04 00:14:02] Set ATHENA_PROC_NUMBER=8
[2025-06-04 00:14:02] Set ATHENA_CORE_NUMBER=8
[2025-06-04 00:14:02] Starting ATLAS job with PandaID=6677734927
[2025-06-04 00:14:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 00:17:17] Job failed
[2025-06-04 00:17:17] ++ pwd
[2025-06-04 00:17:17] + export RUNTIME_CONFIG_DIR=/tmp/boinchome/slots/9/
[2025-06-04 00:17:17] + RUNTIME_CONFIG_DIR=/tmp/boinchome/slots/9/
[2025-06-04 00:17:17] + mv ATLAS.root_0 EVNT.45006593._001525.pool.root.1
[2025-06-04 00:17:17] mv: &#226;&#128;&#152;ATLAS.root_0&#226;&#128;&#153; and &#226;&#128;&#152;EVNT.45006593._001525.pool.root.1&#226;&#128;&#153; are the same file
[2025-06-04 00:17:17] + tar --strip-components=5 -xvf input.tar.gz
[2025-06-04 00:17:17] + umask 077
[2025-06-04 00:17:17] ++ date +%s
[2025-06-04 00:17:17] + ACCOUNTING_STARTTIME=1749010442
[2025-06-04 00:17:17] + echo 'Detecting resource accounting method available for the job.'
[2025-06-04 00:17:17] Detecting resource accounting method available for the job.
[2025-06-04 00:17:17] + JOB_ACCOUNTING=
[2025-06-04 00:17:17] + command -v arc-job-cgroup
[2025-06-04 00:17:17] + '[' -z '' ']'
[2025-06-04 00:17:17] + GNU_TIME=/usr/bin/time
[2025-06-04 00:17:17] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2025-06-04 00:17:17] Looking for /usr/bin/time tool for accounting measurements
[2025-06-04 00:17:17] + '[' '!' -z /usr/bin/time ']'
[2025-06-04 00:17:17] + /usr/bin/time --version
[2025-06-04 00:17:17] + echo 'GNU time found and will be used for job accounting.'
[2025-06-04 00:17:17] GNU time found and will be used for job accounting.
[2025-06-04 00:17:17] + JOB_ACCOUNTING=gnutime
[2025-06-04 00:17:17] + '[' -z gnutime ']'
[2025-06-04 00:17:17] + export PANDA_JSID=harvester-CERN_central_ACTA
[2025-06-04 00:17:17] + PANDA_JSID=harvester-CERN_central_ACTA
[2025-06-04 00:17:17] + export GTAG=http://aipanda403.cern.ch/data/jobs/2025-06-03/BOINC_MCORE/6677734927.out
[2025-06-04 00:17:17] + GTAG=http://aipanda403.cern.ch/data/jobs/2025-06-03/BOINC_MCORE/6677734927.out
[2025-06-04 00:17:17] + export PILOT_NOKILL=YES
[2025-06-04 00:17:17] + PILOT_NOKILL=YES
[2025-06-04 00:17:17] + export GRID_GLOBAL_JOBID=gdFMDmNLjg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeykKDmo405em
[2025-06-04 00:17:17] + GRID_GLOBAL_JOBID=gdFMDmNLjg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeykKDmo405em
[2025-06-04 00:17:17] + export GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/gdFMDmNLjg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeykKDmo405em
[2025-06-04 00:17:17] + GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/gdFMDmNLjg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeykKDmo405em
[2025-06-04 00:17:17] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-06-04 00:17:17] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-06-04 00:17:17] + export GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-06-04 00:17:17] + GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-06-04 00:17:17] ++ pwd
[2025-06-04 00:17:17] + RUNTIME_JOB_DIR=/tmp/boinchome/slots/9
[2025-06-04 00:17:17] + RUNTIME_JOB_STDIN=/dev/null
[2025-06-04 00:17:17] ++ pwd
[2025-06-04 00:17:17] + RUNTIME_JOB_STDOUT=/tmp/boinchome/slots/9/log.45006595._038005.job.log.1
[2025-06-04 00:17:17] ++ pwd
[2025-06-04 00:17:17] + RUNTIME_JOB_STDERR=/tmp/boinchome/slots/9/log.45006595._038005.job.log.1
[2025-06-04 00:17:17] ++ pwd
[2025-06-04 00:17:17] + RUNTIME_JOB_DIAG=/tmp/boinchome/slots/9.diag
[2025-06-04 00:17:17] + '[' '!' -z '' ']'
[2025-06-04 00:17:17] + RUNTIME_LOCAL_SCRATCH_DIR=
[2025-06-04 00:17:17] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2025-06-04 00:17:17] + RUNTIME_FRONTEND_SEES_NODE=
[2025-06-04 00:17:17] + RUNTIME_NODE_SEES_FRONTEND=yes
[2025-06-04 00:17:17] + '[' '!' -z '' ']'
[2025-06-04 00:17:17] + '[' -z yes ']'
[2025-06-04 00:17:17] ++ pwd
[2025-06-04 00:17:17] + RUNTIME_JOB_DIAG=/tmp/boinchome/slots/9/gdFMDmNLjg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeykKDmo405em.diag
[2025-06-04 00:17:17] + runtimeenvironments=
[2025-06-04 00:17:17] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-06-04 00:17:17] + RTE_function_0 1
[2025-06-04 00:17:17] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-06-04 00:17:17] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-06-04 00:17:17] + export BOINC_APP=ATLAS
[2025-06-04 00:17:17] + BOINC_APP=ATLAS
[2025-06-04 00:17:17] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-06-04 00:17:17] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-06-04 00:17:17] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-06-04 00:17:17] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-06-04 00:17:17] + '[' -z 1 ']'
[2025-06-04 00:17:17] + '[' 1 == 1 ']'
[2025-06-04 00:17:17] + shift
[2025-06-04 00:17:17] + export ATLAS_LOCAL_AREA=/tmp/boinchome/slots/9/
[2025-06-04 00:17:17] + ATLAS_LOCAL_AREA=/tmp/boinchome/slots/9/
[2025-06-04 00:17:17] + '[' 0 -ne 0 ']'
[2025-06-04 00:17:17] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2025-06-04 00:17:17] + '[' -f /etc/os-release ']'
[2025-06-04 00:17:17] +++ cat /etc/os-release
[2025-06-04 00:17:17] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2025-06-04 00:17:17] +++ NAME='CentOS Linux'
[2025-06-04 00:17:17] +++ VERSION='7 (Core)'
[2025-06-04 00:17:17] +++ ID=centos
[2025-06-04 00:17:17] +++ ID_LIKE='rhel fedora'
[2025-06-04 00:17:17] +++ VERSION_ID=7
[2025-06-04 00:17:17] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2025-06-04 00:17:17] +++ ANSI_COLOR='0;31'
[2025-06-04 00:17:17] +++ CPE_NAME=cpe:/o:centos:centos:7
[2025-06-04 00:17:17] +++ HOME_URL=https://www.centos.org/
[2025-06-04 00:17:17] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2025-06-04 00:17:17] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2025-06-04 00:17:17] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2025-06-04 00:17:17] +++ REDHAT_SUPPORT_PRODUCT=centos
[2025-06-04 00:17:17] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2025-06-04 00:17:17] ++ echo 'CentOS Linux 7 (Core)'
[2025-06-04 00:17:17] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2025-06-04 00:17:17] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2025-06-04 00:17:17] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2025-06-04 00:17:17] + HOME=/tmp/boinchome/slots/9
[2025-06-04 00:17:17] + export HOME
[2025-06-04 00:17:17] + cd /tmp/boinchome/slots/9
[2025-06-04 00:17:17] + '[' '!' -z '' ']'
[2025-06-04 00:17:17] + '[' -z '' ']'
[2025-06-04 00:17:17] ++ /bin/hostname -f
[2025-06-04 00:17:17] + nodename=c6-12-25-2.aglt2.org
[2025-06-04 00:17:17] + echo nodename=c6-12-25-2.aglt2.org
[2025-06-04 00:17:17] + echo Processors=2
[2025-06-04 00:17:17] + echo Nodecount=1
[2025-06-04 00:17:17] + echo Benchmark=HEPSPEC:1.0
[2025-06-04 00:17:17] + executable=./runpilot2-wrapper.sh
[2025-06-04 00:17:17] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2025-06-04 00:17:17] ++ dd if=./runpilot2-wrapper.sh count=1
[2025-06-04 00:17:17] ++ head -n 1
[2025-06-04 00:17:17] ++ tr -d '\0'
[2025-06-04 00:17:17] + line1='#!/bin/bash'
[2025-06-04 00:17:17] ++ echo '#!/bin/bash'
[2025-06-04 00:17:17] ++ sed -n 's/^#! *//p'
[2025-06-04 00:17:17] + shebang=/bin/bash
[2025-06-04 00:17:17] ++ echo /bin/bash
[2025-06-04 00:17:17] ++ awk '{print $1}'
[2025-06-04 00:17:17] + interpreter=/bin/bash
[2025-06-04 00:17:17] + '[' /bin/bash = /usr/bin/env ']'
[2025-06-04 00:17:17] + '[' x/bin/bash = x ']'
[2025-06-04 00:17:17] + type /bin/bash
[2025-06-04 00:17:17] + '[' xgnutime = xgnutime ']'
[2025-06-04 00:17:17] + /usr/bin/time -o /tmp/boinchome/slots/9/gdFMDmNLjg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeykKDmo405em.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.10.2.2 -z -t --piloturl local --mute --container
[2025-06-04 00:17:17] + RESULT=2
[2025-06-04 00:17:17] + sed -i -e /nodename=/d /tmp/boinchome/slots/9/gdFMDmNLjg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeykKDmo405em.diag
[2025-06-04 00:17:17] ++ grep domain_name init_data.xml
[2025-06-04 00:17:17] ++ awk -F '>' '{print $2}'
[2025-06-04 00:17:17] ++ awk -F '<' '{print $1}'
[2025-06-04 00:17:17] ++ sed -e 's# #_#g'
[2025-06-04 00:17:17] + hostname=c6-12-25-2.aglt2.org
[2025-06-04 00:17:17] ++ grep user_name init_data.xml
[2025-06-04 00:17:17] ++ awk -F '>' '{print $2}'
[2025-06-04 00:17:17] ++ awk -F '<' '{print $1}'
[2025-06-04 00:17:17] ++ sed -e 's# #_#g'
[2025-06-04 00:17:17] + username=AGLT2
[2025-06-04 00:17:17] + nodename=AGLT2@c6-12-25-2.aglt2.org
[2025-06-04 00:17:17] + echo nodename=AGLT2@c6-12-25-2.aglt2.org
[2025-06-04 00:17:17] + '[' -n 8 ']'
[2025-06-04 00:17:17] + sed -i -e s/Processors=1/Processors=8/ /tmp/boinchome/slots/9/gdFMDmNLjg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeykKDmo405em.diag
[2025-06-04 00:17:17] + echo exitcode=2
[2025-06-04 00:17:17] + runtimeenvironments=
[2025-06-04 00:17:17] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-06-04 00:17:17] + RTE_function_0 2
[2025-06-04 00:17:17] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-06-04 00:17:17] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-06-04 00:17:17] + export BOINC_APP=ATLAS
[2025-06-04 00:17:17] + BOINC_APP=ATLAS
[2025-06-04 00:17:17] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-06-04 00:17:17] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-06-04 00:17:17] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-06-04 00:17:17] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-06-04 00:17:17] + '[' -z 2 ']'
[2025-06-04 00:17:17] + '[' 2 == 1 ']'
[2025-06-04 00:17:17] + '[' 0 -ne 0 ']'
[2025-06-04 00:17:17] + echo 'zip all output files'
[2025-06-04 00:17:17] + flist='*.diag '
[2025-06-04 00:17:17] + for f in ./heartbeat.json ./output.list ./log.45006595._038005.job.log.1 ./log.45006595._038005.job.log.1 ./gmlog/
[2025-06-04 00:17:17] + '[' -e ./heartbeat.json ']'
[2025-06-04 00:17:17] + flist='*.diag  ./heartbeat.json'
[2025-06-04 00:17:17] + for f in ./heartbeat.json ./output.list ./log.45006595._038005.job.log.1 ./log.45006595._038005.job.log.1 ./gmlog/
[2025-06-04 00:17:17] + '[' -e ./output.list ']'
[2025-06-04 00:17:17] + for f in ./heartbeat.json ./output.list ./log.45006595._038005.job.log.1 ./log.45006595._038005.job.log.1 ./gmlog/
[2025-06-04 00:17:17] + '[' -e ./log.45006595._038005.job.log.1 ']'
[2025-06-04 00:17:17] + flist='*.diag  ./heartbeat.json ./log.45006595._038005.job.log.1'
[2025-06-04 00:17:17] + for f in ./heartbeat.json ./output.list ./log.45006595._038005.job.log.1 ./log.45006595._038005.job.log.1 ./gmlog/
[2025-06-04 00:17:17] + '[' -e ./log.45006595._038005.job.log.1 ']'
[2025-06-04 00:17:17] + flist='*.diag  ./heartbeat.json ./log.45006595._038005.job.log.1 ./log.45006595._038005.job.log.1'
[2025-06-04 00:17:17] + for f in ./heartbeat.json ./output.list ./log.45006595._038005.job.log.1 ./log.45006595._038005.job.log.1 ./gmlog/
[2025-06-04 00:17:17] + '[' -e ./gmlog/ ']'
[2025-06-04 00:17:17] + '[' -f output.list ']'
[2025-06-04 00:17:17] + tar cvf result.tar.gz gdFMDmNLjg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeykKDmo405em.diag ./heartbeat.json ./log.45006595._038005.job.log.1 ./log.45006595._038005.job.log.1
[2025-06-04 00:17:17] + '[' xgnutime = xcgroup ']'
[2025-06-04 00:17:17] + '[' -n '' ']'
[2025-06-04 00:17:17] + '[' -n '' ']'
[2025-06-04 00:17:17] ++ date +%s
[2025-06-04 00:17:17] + ACCOUNTING_ENDTIME=1749010637
[2025-06-04 00:17:17] ++ date -d '1970-01-01 UTC 1749010442 seconds' +%Y%m%d%H%M%SZ
[2025-06-04 00:17:17] + echo LRMSStartTime=20250604001402Z
[2025-06-04 00:17:17] ++ date -d '1970-01-01 UTC 1749010637 seconds' +%Y%m%d%H%M%SZ
[2025-06-04 00:17:17] + echo LRMSEndTime=20250604001717Z
[2025-06-04 00:17:17] + echo walltime=195
[2025-06-04 00:17:17] + echo exitcode=2
[2025-06-04 00:17:17] + exit 2
[2025-06-04 00:17:17] ./runtime_log
[2025-06-04 00:17:17] ./PanDA_Pilot-6677734927/PoolFileCatalog.xml
[2025-06-04 00:17:17] ./PanDA_Pilot-6677734927/prmon.log
[2025-06-04 00:17:17] ./PanDA_Pilot-6677734927/log.EVNTtoHITS
[2025-06-04 00:17:17] ./PanDA_Pilot-6677734927/pilotlog.txt
[2025-06-04 00:17:17] ./pilot3/pilot/util/lokirealtimelogger.py
[2025-06-04 00:17:17] ./pilot3/pilot/util/loggingsupport.py
[2025-06-04 00:17:17] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2025-06-04 00:17:17] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2025-06-04 00:17:17] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2025-06-04 00:17:17] ./pilot3/pilot/util/realtimelogger.py
[2025-06-04 00:17:17] ./runtime_log.err
[2025-06-04 00:17:17] ./log.45006595._038005.job.log.1
[2025-06-04 00:17:17] ./pilotlog.txt
00:32:42 (3738128): wrapper (7.7.26015): starting
00:32:42 (3738128): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 00:32:42] Arguments: --nthreads 8
[2025-06-04 00:32:42] Threads: 8
[2025-06-04 00:32:42] This job has been restarted, cleaning up previous attempt
[2025-06-04 00:32:42] Checking for CVMFS
[2025-06-04 00:32:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 00:32:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 00:32:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 00:32:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 00:32:43] 2.12.6.0 5779 30930 427308 146768 1 235 23614557 32935936 17900 16776704 3 89275710 99.638 88386088 10220 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 00:32:43] CVMFS is ok
[2025-06-04 00:32:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 00:32:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 00:32:43] Further information can be found at the LHC@home message board.
[2025-06-04 00:32:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 00:32:43] Checking for apptainer binary...
[2025-06-04 00:32:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 00:32:43] Running /usr/bin/apptainer --version
[2025-06-04 00:32:43] apptainer version 1.4.1-1.el9
[2025-06-04 00:32:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 00:32:43] c6-12-25-2.aglt2.org
[2025-06-04 00:32:43] apptainer works
[2025-06-04 00:32:43] Set ATHENA_PROC_NUMBER=8
[2025-06-04 00:32:43] Set ATHENA_CORE_NUMBER=8
[2025-06-04 00:32:44] Starting ATLAS job with PandaID=6677734927
[2025-06-04 00:32:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 03:56:50]  *** The last 200 lines of the pilot log: ***
[2025-06-04 03:56:50] 2025-06-04 07:56:30,283 | INFO     | mean y: 2149759.615
[2025-06-04 03:56:50] 2025-06-04 07:56:30,283 | INFO     | -- intersect: -73927406111.72374
[2025-06-04 03:56:50] 2025-06-04 07:56:30,283 | INFO     | intersect: -73927406111.72374
[2025-06-04 03:56:50] 2025-06-04 07:56:30,284 | INFO     | chi2: 5.6262777789532
[2025-06-04 03:56:50] 2025-06-04 07:56:30,285 | INFO     | sum of square deviations: 2299168690.0
[2025-06-04 03:56:50] 2025-06-04 07:56:30,287 | INFO     | sum of deviations: 113536425374.99997
[2025-06-04 03:56:50] 2025-06-04 07:56:30,288 | INFO     | mean x: 1749017545.0
[2025-06-04 03:56:50] 2025-06-04 07:56:30,288 | INFO     | mean y: 2156849.8307692306
[2025-06-04 03:56:50] 2025-06-04 07:56:30,288 | INFO     | -- intersect: -86366973367.16873
[2025-06-04 03:56:50] 2025-06-04 07:56:30,288 | INFO     | intersect: -86366973367.16873
[2025-06-04 03:56:50] 2025-06-04 07:56:30,289 | INFO     | chi2: 4.838930757508094
[2025-06-04 03:56:50] 2025-06-04 07:56:30,289 | INFO     | current chi2=4.838930757508094 (change=13.99410147132117 %)
[2025-06-04 03:56:50] 2025-06-04 07:56:30,289 | INFO     | right removable region: 194
[2025-06-04 03:56:50] 2025-06-04 07:56:30,290 | INFO     | sum of square deviations: 2299168690.0
[2025-06-04 03:56:50] 2025-06-04 07:56:30,293 | INFO     | sum of deviations: 56875069285.0
[2025-06-04 03:56:50] 2025-06-04 07:56:30,293 | INFO     | mean x: 1749017850.0
[2025-06-04 03:56:50] 2025-06-04 07:56:30,294 | INFO     | mean y: 2189990.8307692306
[2025-06-04 03:56:50] 2025-06-04 07:56:30,294 | INFO     | -- intersect: -43263670331.68942
[2025-06-04 03:56:50] 2025-06-04 07:56:30,294 | INFO     | intersect: -43263670331.68942
[2025-06-04 03:56:50] 2025-06-04 07:56:30,295 | INFO     | chi2: 2.730747121378047
[2025-06-04 03:56:50] 2025-06-04 07:56:30,295 | INFO     | current chi2=2.730747121378047 (change=51.46440988759503 %)
[2025-06-04 03:56:50] 2025-06-04 07:56:30,296 | INFO     | sum of square deviations: 2126802667.5
[2025-06-04 03:56:50] 2025-06-04 07:56:30,298 | INFO     | sum of deviations: 24496934733.999985
[2025-06-04 03:56:50] 2025-06-04 07:56:30,299 | INFO     | mean x: 1749018002.5
[2025-06-04 03:56:50] 2025-06-04 07:56:30,299 | INFO     | mean y: 2218604.515789474
[2025-06-04 03:56:50] 2025-06-04 07:56:30,299 | INFO     | -- intersect: -20143317467.336784
[2025-06-04 03:56:50] 2025-06-04 07:56:30,299 | INFO     | intersect: -20143317467.336784
[2025-06-04 03:56:50] 2025-06-04 07:56:30,300 | INFO     | chi2: 1.5101220966367395
[2025-06-04 03:56:50] 2025-06-04 07:56:30,300 | INFO     | current chi2=1.5101220966367395 (change=44.69930647131215 %)
[2025-06-04 03:56:50] 2025-06-04 07:56:30,301 | INFO     | sum of square deviations: 1963274020.0
[2025-06-04 03:56:50] 2025-06-04 07:56:30,303 | INFO     | sum of deviations: 3225067926.0
[2025-06-04 03:56:50] 2025-06-04 07:56:30,304 | INFO     | mean x: 1749018155.0
[2025-06-04 03:56:50] 2025-06-04 07:56:30,304 | INFO     | mean y: 2238377.6648648647
[2025-06-04 03:56:50] 2025-06-04 07:56:30,304 | INFO     | -- intersect: -2870871690.6292167
[2025-06-04 03:56:50] 2025-06-04 07:56:30,304 | INFO     | intersect: -2870871690.6292167
[2025-06-04 03:56:50] 2025-06-04 07:56:30,305 | INFO     | chi2: 0.9574478232159839
[2025-06-04 03:56:50] 2025-06-04 07:56:30,305 | INFO     | current chi2=0.9574478232159839 (change=36.59798599408891 %)
[2025-06-04 03:56:50] 2025-06-04 07:56:30,306 | INFO     | sum of square deviations: 1808350185.0
[2025-06-04 03:56:50] 2025-06-04 07:56:30,309 | INFO     | sum of deviations: -3923246903.0
[2025-06-04 03:56:50] 2025-06-04 07:56:30,309 | INFO     | mean x: 1749018307.5
[2025-06-04 03:56:50] 2025-06-04 07:56:30,309 | INFO     | mean y: 2245345.0
[2025-06-04 03:56:50] 2025-06-04 07:56:30,309 | INFO     | -- intersect: 3796770716.859697
[2025-06-04 03:56:50] 2025-06-04 07:56:30,310 | INFO     | intersect: 3796770716.859697
[2025-06-04 03:56:50] 2025-06-04 07:56:30,310 | INFO     | chi2: 0.8664550212230255
[2025-06-04 03:56:50] 2025-06-04 07:56:30,311 | INFO     | current chi2=0.8664550212230255 (change=9.50368258056313 %)
[2025-06-04 03:56:50] 2025-06-04 07:56:30,311 | INFO     | left removable region: 40
[2025-06-04 03:56:50] 2025-06-04 07:56:30,312 | INFO     | sum of square deviations: 1132458442.5
[2025-06-04 03:56:50] 2025-06-04 07:56:30,314 | INFO     | sum of deviations: 2476730783.9999995
[2025-06-04 03:56:50] 2025-06-04 07:56:30,314 | INFO     | mean x: 1749018734.5
[2025-06-04 03:56:50] 2025-06-04 07:56:30,315 | INFO     | mean y: 2260671.922077922
[2025-06-04 03:56:50] 2025-06-04 07:56:30,315 | INFO     | -- intersect: -3822911518.914295
[2025-06-04 03:56:50] 2025-06-04 07:56:30,315 | INFO     | intersect: -3822911518.914295
[2025-06-04 03:56:50] 2025-06-04 07:56:30,316 | INFO     | chi2: 0.04855929554834481
[2025-06-04 03:56:50] 2025-06-04 07:56:30,316 | INFO     | -- intersect: -3822911518.914295
[2025-06-04 03:56:50] 2025-06-04 07:56:30,317 | INFO     | current memory leak: 2.19 B/s (using 154 data points, chi2=0.05)
[2025-06-04 03:56:50] 2025-06-04 07:56:30,318 | INFO     | ..............................
[2025-06-04 03:56:50] 2025-06-04 07:56:30,318 | INFO     | . Timing measurements:
[2025-06-04 03:56:50] 2025-06-04 07:56:30,318 | INFO     | . get job = 0 s
[2025-06-04 03:56:50] 2025-06-04 07:56:30,318 | INFO     | . initial setup = 2 s
[2025-06-04 03:56:50] 2025-06-04 07:56:30,319 | INFO     | . payload setup = 14 s
[2025-06-04 03:56:50] 2025-06-04 07:56:30,319 | INFO     | . stage-in = 0 s
[2025-06-04 03:56:50] 2025-06-04 07:56:30,319 | INFO     | . payload execution = 12151 s
[2025-06-04 03:56:50] 2025-06-04 07:56:30,319 | INFO     | . stage-out = 3 s
[2025-06-04 03:56:50] 2025-06-04 07:56:30,319 | INFO     | . log creation = 0 s
[2025-06-04 03:56:50] 2025-06-04 07:56:30,320 | INFO     | ..............................
[2025-06-04 03:56:50] 2025-06-04 07:56:30,574 | INFO     | 
[2025-06-04 03:56:50] 2025-06-04 07:56:30,575 | INFO     | job summary report
[2025-06-04 03:56:50] 2025-06-04 07:56:30,575 | INFO     | --------------------------------------------------
[2025-06-04 03:56:50] 2025-06-04 07:56:30,575 | INFO     | PanDA job id: 6677734927
[2025-06-04 03:56:50] 2025-06-04 07:56:30,576 | INFO     | task id: 45006595
[2025-06-04 03:56:50] 2025-06-04 07:56:30,576 | INFO     | errors: (none)
[2025-06-04 03:56:50] 2025-06-04 07:56:30,576 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 03:56:50] 2025-06-04 07:56:30,576 | INFO     | pilot state: finished 
[2025-06-04 03:56:50] 2025-06-04 07:56:30,576 | INFO     | transexitcode: 0
[2025-06-04 03:56:50] 2025-06-04 07:56:30,577 | INFO     | exeerrorcode: 0
[2025-06-04 03:56:50] 2025-06-04 07:56:30,577 | INFO     | exeerrordiag: 
[2025-06-04 03:56:50] 2025-06-04 07:56:30,577 | INFO     | exitcode: 0
[2025-06-04 03:56:50] 2025-06-04 07:56:30,577 | INFO     | exitmsg: OK
[2025-06-04 03:56:50] 2025-06-04 07:56:30,577 | INFO     | cpuconsumptiontime: 86994 s
[2025-06-04 03:56:50] 2025-06-04 07:56:30,578 | INFO     | nevents: 400
[2025-06-04 03:56:50] 2025-06-04 07:56:30,578 | INFO     | neventsw: 0
[2025-06-04 03:56:50] 2025-06-04 07:56:30,578 | INFO     | pid: 3769741
[2025-06-04 03:56:50] 2025-06-04 07:56:30,578 | INFO     | pgrp: 3769741
[2025-06-04 03:56:50] 2025-06-04 07:56:30,578 | INFO     | corecount: 8
[2025-06-04 03:56:50] 2025-06-04 07:56:30,579 | INFO     | event service: False
[2025-06-04 03:56:50] 2025-06-04 07:56:30,579 | INFO     | sizes: {0: 2404356, 1: 2405041, 2: 2405240, 11: 2405446, 13: 2405474, 12170: 2435491, 12174: 2444432, 12177: 2444488, 12185: 2444658}
[2025-06-04 03:56:50] 2025-06-04 07:56:30,579 | INFO     | --------------------------------------------------
[2025-06-04 03:56:50] 2025-06-04 07:56:30,579 | INFO     | 
[2025-06-04 03:56:50] 2025-06-04 07:56:30,580 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2025-06-04 03:56:50] 2025-06-04 07:56:30,620 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 03:56:50] 2025-06-04 07:56:30,621 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 03:56:50] 2025-06-04 07:56:30,621 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 03:56:50] 2025-06-04 07:56:30,621 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 03:56:50] 2025-06-04 07:56:30,621 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 03:56:50] 2025-06-04 07:56:30,621 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 03:56:50] 2025-06-04 07:56:30,622 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 03:56:50] 2025-06-04 07:56:30,622 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 03:56:50] 2025-06-04 07:56:30,622 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 03:56:50] 2025-06-04 07:56:30,622 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 03:56:50] 2025-06-04 07:56:30,622 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 03:56:50] 2025-06-04 07:56:30,623 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 03:56:50] 2025-06-04 07:56:30,623 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 03:56:50] 2025-06-04 07:56:30,623 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 03:56:50] 2025-06-04 07:56:30,623 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 03:56:50] 2025-06-04 07:56:30,623 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 03:56:50] 2025-06-04 07:56:30,624 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 03:56:50] 2025-06-04 07:56:30,624 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 03:56:50] 2025-06-04 07:56:30,624 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 03:56:50] 2025-06-04 07:56:30,624 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 03:56:50] 2025-06-04 07:56:30,625 | INFO     | job 6677734927 has completed (purged errors)
[2025-06-04 03:56:50] 2025-06-04 07:56:30,625 | INFO     | overall cleanup function is called
[2025-06-04 03:56:50] 2025-06-04 07:56:31,636 | INFO     | --- collectZombieJob: --- 10, [3769741]
[2025-06-04 03:56:50] 2025-06-04 07:56:31,637 | INFO     | zombie collector waiting for pid 3769741
[2025-06-04 03:56:50] 2025-06-04 07:56:31,637 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 03:56:50] 2025-06-04 07:56:31,637 | INFO     | collected zombie processes
[2025-06-04 03:56:50] 2025-06-04 07:56:31,637 | INFO     | will attempt to kill all subprocesses of pid=3769741
[2025-06-04 03:56:50] 2025-06-04 07:56:32,258 | INFO     | process IDs to be killed: [3769741] (in reverse order)
[2025-06-04 03:56:50] 2025-06-04 07:56:32,427 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 03:56:50] 2025-06-04 07:56:32,427 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 03:56:50] 2025-06-04 07:56:32,449 | INFO     | did not find any defunct processes belonging to 3769741
[2025-06-04 03:56:50] 2025-06-04 07:56:32,470 | INFO     | did not find any defunct processes belonging to 3769741
[2025-06-04 03:56:50] 2025-06-04 07:56:32,471 | INFO     | ready for new job
[2025-06-04 03:56:50] 2025-06-04 07:56:32,471 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 03:56:50] 2025-06-04 07:56:32,476 | INFO     | **************************************
[2025-06-04 03:56:50] 2025-06-04 07:56:32,476 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 03:56:50] 2025-06-04 07:56:32,476 | INFO     | **************************************
[2025-06-04 03:56:50] 2025-06-04 07:56:32,476 | INFO     | 
[2025-06-04 03:56:50] 2025-06-04 07:56:32,497 | INFO     | architecture information:
[2025-06-04 03:56:50] 2025-06-04 07:56:32,498 | INFO     | executing command: cat /etc/os-release
[2025-06-04 03:56:50] 2025-06-04 07:56:32,521 | INFO     | cat /etc/os-release:
[2025-06-04 03:56:50] NAME="CentOS Linux"
[2025-06-04 03:56:50] VERSION="7 (Core)"
[2025-06-04 03:56:50] ID="centos"
[2025-06-04 03:56:50] ID_LIKE="rhel fedora"
[2025-06-04 03:56:50] VERSION_ID="7"
[2025-06-04 03:56:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 03:56:50] ANSI_COLOR="0;31"
[2025-06-04 03:56:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 03:56:50] HOME_URL="https://www.centos.org/"
[2025-06-04 03:56:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 03:56:50] 
[2025-06-04 03:56:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 03:56:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 03:56:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 03:56:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 03:56:50] 
[2025-06-04 03:56:50] 2025-06-04 07:56:32,522 | INFO     | **************************************
[2025-06-04 03:56:50] 2025-06-04 07:56:33,026 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2025-06-04 03:56:50] 2025-06-04 07:56:33,061 | INFO     | sufficient remaining disk space (95416221696 B)
[2025-06-04 03:56:50] 2025-06-04 07:56:33,062 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 03:56:50] 2025-06-04 07:56:33,062 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 03:56:50] 2025-06-04 07:56:33,062 | INFO     | update_server=False
[2025-06-04 03:56:50] 2025-06-04 07:56:33,063 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 03:56:50] 2025-06-04 07:56:33,063 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 03:56:50] 2025-06-04 07:56:33,064 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 03:56:50] 2025-06-04 07:56:33,153 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 03:56:50] 2025-06-04 07:56:33,154 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 03:56:50] 2025-06-04 07:56:33,154 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 03:56:50] 2025-06-04 07:56:33,154 | INFO     | will abort loop
[2025-06-04 03:56:50] 2025-06-04 07:56:33,360 | INFO     | all data control threads have been joined
[2025-06-04 03:56:50] 2025-06-04 07:56:33,717 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 03:56:50] 2025-06-04 07:56:33,717 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 03:56:50] 2025-06-04 07:56:33,717 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 03:56:50] 2025-06-04 07:56:33,773 | INFO     | all payload control threads have been joined
[2025-06-04 03:56:50] 2025-06-04 07:56:33,877 | INFO     | all job control threads have been joined
[2025-06-04 03:56:50] 2025-06-04 07:56:34,069 | INFO     | [job] retrieve thread has finished
[2025-06-04 03:56:50] 2025-06-04 07:56:34,159 | INFO     | [job] job monitor thread has finished
[2025-06-04 03:56:50] 2025-06-04 07:56:34,174 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 03:56:50] 2025-06-04 07:56:34,236 | INFO     | [payload] validate_post thread has finished
[2025-06-04 03:56:50] 2025-06-04 07:56:34,283 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 03:56:50] 2025-06-04 07:56:34,365 | INFO     | [data] control thread has finished
[2025-06-04 03:56:50] 2025-06-04 07:56:34,779 | INFO     | [payload] control thread has finished
[2025-06-04 03:56:50] 2025-06-04 07:56:34,810 | INFO     | [job] validate thread has finished
[2025-06-04 03:56:50] 2025-06-04 07:56:34,882 | INFO     | [job] control thread has finished
[2025-06-04 03:56:50] 2025-06-04 07:56:35,067 | INFO     | [data] copytool_out thread has finished
[2025-06-04 03:56:50] 2025-06-04 07:56:35,325 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 03:56:50] 2025-06-04 07:56:35,479 | INFO     | [data] copytool_in thread has finished
[2025-06-04 03:56:50] 2025-06-04 07:56:35,585 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 03:56:50] 2025-06-04 07:56:35,608 | INFO     | [payload] failed_post thread has finished
[2025-06-04 03:56:50] 2025-06-04 07:56:36,590 | INFO     | [job] queue monitor thread has finished
[2025-06-04 03:56:50] 2025-06-04 07:56:37,071 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 03:56:50] 2025-06-04 07:56:43,124 | INFO     | job.realtimelogging is not enabled
[2025-06-04 03:56:50] 2025-06-04 07:56:44,129 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 03:56:50] 2025-06-04 07:56:44,907 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140099252365120)>', '<ExcThread(monitor, started 140098905548544)>']
[2025-06-04 03:56:50] 2025-06-04 07:56:45,778 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 03:56:50] 2025-06-04 07:56:45,779 | INFO     | [monitor] control thread has ended
[2025-06-04 03:56:50] 2025-06-04 07:56:49,935 | INFO     | all workflow threads have been joined
[2025-06-04 03:56:50] 2025-06-04 07:56:49,935 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 03:56:50] 2025-06-04 07:56:49,936 | INFO     | traces error code: 0
[2025-06-04 03:56:50] 2025-06-04 07:56:49,937 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 03:56:50] 2025-06-04 07:56:50,256 [wrapper] ==== pilot stdout END ====
[2025-06-04 03:56:50] 2025-06-04 07:56:50,262 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 03:56:50] 2025-06-04 07:56:50,267 [wrapper] pilotpid: 3749529
[2025-06-04 03:56:50] 2025-06-04 07:56:50,272 [wrapper] Pilot exit status: 0
[2025-06-04 03:56:50] 2025-06-04 07:56:50,293 [wrapper] pandaids: 6677734927 6677734927 6677734927
[2025-06-04 03:56:50] 2025-06-04 07:56:50,467 [wrapper] cleanup supervisor_pilot  131515 3749531
[2025-06-04 03:56:50] 2025-06-04 07:56:50,473 [wrapper] Test setup, not cleaning
[2025-06-04 03:56:50] 2025-06-04 07:56:50,478 [wrapper] apfmon messages muted
[2025-06-04 03:56:50] 2025-06-04 07:56:50,483 [wrapper] ==== wrapper stdout END ====
[2025-06-04 03:56:50] 2025-06-04 07:56:50,488 [wrapper] ==== wrapper stderr END ====
[2025-06-04 03:56:50]  *** Error codes and diagnostics ***
[2025-06-04 03:56:50]     "exeErrorCode": 0,
[2025-06-04 03:56:50]     "exeErrorDiag": "",
[2025-06-04 03:56:50]     "pilotErrorCode": 0,
[2025-06-04 03:56:50]     "pilotErrorDiag": "",
[2025-06-04 03:56:50]  *** Listing of results directory ***
[2025-06-04 03:56:50] total 600828
[2025-06-04 03:56:50] drwx------. 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-06-04 03:56:50] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 12:03 pilot3.tar.gz
[2025-06-04 03:56:50] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 12:06 queuedata.json
[2025-06-04 03:56:50] -rwx------. 1 boincer umatlas     37140 Jun  3 12:06 runpilot2-wrapper.sh
[2025-06-04 03:56:50] -rw-r--r--. 1 boincer umatlas       100 Jun  3 14:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 03:56:50] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 14:29 run_atlas
[2025-06-04 03:56:50] -rw-r--r--. 1 boincer umatlas       105 Jun  3 14:29 job.xml
[2025-06-04 03:56:50] -rw-r--r--. 3 boincer umatlas 217451433 Jun  3 14:29 EVNT.45006593._001525.pool.root.1
[2025-06-04 03:56:50] -rw-r--r--. 3 boincer umatlas 217451433 Jun  3 14:29 ATLAS.root_0
[2025-06-04 03:56:50] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 14:29 start_atlas.sh
[2025-06-04 03:56:50] -rw-r--r--. 2 boincer umatlas    508879 Jun  3 14:29 input.tar.gz
[2025-06-04 03:56:50] -rw-r--r--. 1 boincer umatlas         0 Jun  3 14:29 boinc_lockfile
[2025-06-04 03:56:50] -rw-------. 1 boincer umatlas         0 Jun  4 00:14 wrapper_sigint_3671535
[2025-06-04 03:56:50] -rw-------. 1 boincer umatlas         0 Jun  4 00:17 wrapper_sigkill_3671535
[2025-06-04 03:56:50] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 00:17 shared
[2025-06-04 03:56:50] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 00:32 pandaJob.out
[2025-06-04 03:56:50] -rw-------. 1 boincer umatlas    986745 Jun  4 00:33 agis_schedconf.cvmfs.json
[2025-06-04 03:56:50] -rw-r--r--. 1 boincer umatlas      6860 Jun  4 03:54 init_data.xml
[2025-06-04 03:56:50] -rw-------. 1 boincer umatlas 173537918 Jun  4 03:55 HITS.45006595._038005.pool.root.1
[2025-06-04 03:56:50] -rw-r--r--. 1 boincer umatlas       532 Jun  4 03:55 boinc_task_state.xml
[2025-06-04 03:56:50] -rw-------. 1 boincer umatlas        98 Jun  4 03:55 pilot_heartbeat.json
[2025-06-04 03:56:50] -rw-------. 1 boincer umatlas      1037 Jun  4 03:56 memory_monitor_summary.json
[2025-06-04 03:56:50] -rw-------. 1 boincer umatlas   1603667 Jun  4 03:56 agis_ddmendpoints.agis.ALL.json
[2025-06-04 03:56:50] -rw-------. 1 boincer umatlas    391459 Jun  4 03:56 log.45006595._038005.job.log.tgz.1
[2025-06-04 03:56:50] -rw-------. 1 boincer umatlas      7724 Jun  4 03:56 heartbeat.json
[2025-06-04 03:56:50] -rw-r--r--. 1 boincer umatlas        29 Jun  4 03:56 wrapper_checkpoint.txt
[2025-06-04 03:56:50] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 03:56 boinc_mmap_file
[2025-06-04 03:56:50] -rw-------. 1 boincer umatlas      4611 Jun  4 03:56 pilotlog.txt
[2025-06-04 03:56:50] -rw-------. 1 boincer umatlas   1081587 Jun  4 03:56 log.45006595._038005.job.log.1
[2025-06-04 03:56:50] -rw-------. 1 boincer umatlas       357 Jun  4 03:56 output.list
[2025-06-04 03:56:50] -rw-r--r--. 1 boincer umatlas       620 Jun  4 03:56 runtime_log
[2025-06-04 03:56:50] -rw-r--r--. 2 boincer umatlas   1495040 Jun  4 03:56 result.tar.gz
[2025-06-04 03:56:50] -rw-r--r--. 1 boincer umatlas      8755 Jun  4 03:56 runtime_log.err
[2025-06-04 03:56:50] -rw-------. 1 boincer umatlas      1383 Jun  4 03:56 gdFMDmNLjg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeykKDmo405em.diag
[2025-06-04 03:56:50] -rw-r--r--. 1 boincer umatlas     38177 Jun  4 03:56 stderr.txt
[2025-06-04 03:56:50] HITS file was successfully produced:
[2025-06-04 03:56:50] -rw-------. 1 boincer umatlas 173537918 Jun  4 03:55 shared/HITS.pool.root.1
[2025-06-04 03:56:50]  *** Contents of shared directory: ***
[2025-06-04 03:56:50] total 383812
[2025-06-04 03:56:50] -rw-r--r--. 3 boincer umatlas 217451433 Jun  3 14:29 ATLAS.root_0
[2025-06-04 03:56:50] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 14:29 start_atlas.sh
[2025-06-04 03:56:50] -rw-r--r--. 2 boincer umatlas    508879 Jun  3 14:29 input.tar.gz
[2025-06-04 03:56:50] -rw-------. 1 boincer umatlas 173537918 Jun  4 03:55 HITS.pool.root.1
[2025-06-04 03:56:50] -rw-r--r--. 2 boincer umatlas   1495040 Jun  4 03:56 result.tar.gz
03:56:52 (3738128): run_atlas exited; CPU time 88259.246900
03:56:52 (3738128): called boinc_finish(0)

</stderr_txt>
]]>


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