Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:46:58 (25846): wrapper (7.7.26015): starting
07:46:58 (25846): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 07:46:58] Arguments: --nthreads 8
[2025-06-04 07:46:58] Threads: 8
[2025-06-04 07:46:58] Checking for CVMFS
[2025-06-04 07:46:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:46:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:46:59] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:47:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:47:00] 2.11.2.0 26010 32841 94200 146769 0 69 24523019 25165825 4293 130560 0 16757342 99.786 19616179 2056 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 07:47:00] CVMFS is ok
[2025-06-04 07:47:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:47:00] Checking for apptainer binary...
[2025-06-04 07:47:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:47:00] Running /usr/bin/apptainer --version
[2025-06-04 07:47:01] apptainer version 1.3.2-1.el7
[2025-06-04 07:47:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:58:07] cg-vwn216.simple-grid.lan
[2025-06-04 07:58:07] apptainer works
[2025-06-04 07:58:07] Set ATHENA_PROC_NUMBER=8
[2025-06-04 07:58:07] Set ATHENA_CORE_NUMBER=8
[2025-06-04 07:58:07] Starting ATLAS job with PandaID=6677862133
[2025-06-04 07:58:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:50:43]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:50:43] 2025-06-04 09:52:52,815 | INFO     | using path: /var/lib/boinc/slots/13/PanDA_Pilot-6677862133/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:50:43] 2025-06-04 09:52:52,816 | INFO     | extracted standard info from prmon json
[2025-06-04 12:50:43] 2025-06-04 09:52:52,816 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:50:43] 2025-06-04 09:52:52,816 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:50:43] 2025-06-04 09:52:52,817 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:50:43] 2025-06-04 09:52:52,817 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:50:43] 2025-06-04 09:52:52,821 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:50:43] 2025-06-04 09:52:52,822 | INFO     | sum of square deviations: 3301699115.0
[2025-06-04 12:50:43] 2025-06-04 09:52:52,824 | INFO     | sum of deviations: 53590854355.999985
[2025-06-04 12:50:43] 2025-06-04 09:52:52,824 | INFO     | mean x: 1749023995.5
[2025-06-04 12:50:43] 2025-06-04 09:52:52,824 | INFO     | mean y: 2441153.536363636
[2025-06-04 12:50:43] 2025-06-04 09:52:52,824 | INFO     | -- intersect: -28386484349.140663
[2025-06-04 12:50:43] 2025-06-04 09:52:52,825 | INFO     | intersect: -28386484349.140663
[2025-06-04 12:50:43] 2025-06-04 09:52:52,825 | INFO     | chi2: 6.431796023747905
[2025-06-04 12:50:43] 2025-06-04 09:52:52,825 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 12:50:43] 2025-06-04 09:52:52,827 | INFO     | sum of deviations: 66817606905.0
[2025-06-04 12:50:43] 2025-06-04 09:52:52,827 | INFO     | mean x: 1749023843.0
[2025-06-04 12:50:43] 2025-06-04 09:52:52,827 | INFO     | mean y: 2450135.5441860463
[2025-06-04 12:50:43] 2025-06-04 09:52:52,827 | INFO     | -- intersect: -37920510800.451256
[2025-06-04 12:50:43] 2025-06-04 09:52:52,828 | INFO     | intersect: -37920510800.451256
[2025-06-04 12:50:43] 2025-06-04 09:52:52,828 | INFO     | chi2: 5.724809922409002
[2025-06-04 12:50:43] 2025-06-04 09:52:52,828 | INFO     | current chi2=5.724809922409002 (change=10.99204792453806 %)
[2025-06-04 12:50:43] 2025-06-04 09:52:52,828 | INFO     | right removable region: 214
[2025-06-04 12:50:43] 2025-06-04 09:52:52,828 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 12:50:43] 2025-06-04 09:52:52,830 | INFO     | sum of deviations: -21933163843.000004
[2025-06-04 12:50:43] 2025-06-04 09:52:52,830 | INFO     | mean x: 1749024148.0
[2025-06-04 12:50:43] 2025-06-04 09:52:52,830 | INFO     | mean y: 2493439.6093023256
[2025-06-04 12:50:43] 2025-06-04 09:52:52,831 | INFO     | -- intersect: 12450868938.15265
[2025-06-04 12:50:43] 2025-06-04 09:52:52,831 | INFO     | intersect: 12450868938.15265
[2025-06-04 12:50:43] 2025-06-04 09:52:52,831 | INFO     | chi2: 1.6945352914440768
[2025-06-04 12:50:43] 2025-06-04 09:52:52,831 | INFO     | current chi2=1.6945352914440768 (change=73.6537774956264 %)
[2025-06-04 12:50:43] 2025-06-04 09:52:52,831 | INFO     | sum of square deviations: 2871616632.5
[2025-06-04 12:50:43] 2025-06-04 09:52:52,833 | INFO     | sum of deviations: -46190102342.49999
[2025-06-04 12:50:43] 2025-06-04 09:52:52,833 | INFO     | mean x: 1749024300.5
[2025-06-04 12:50:43] 2025-06-04 09:52:52,833 | INFO     | mean y: 2510884.785714286
[2025-06-04 12:50:43] 2025-06-04 09:52:52,834 | INFO     | -- intersect: 28135657393.71981
[2025-06-04 12:50:43] 2025-06-04 09:52:52,834 | INFO     | intersect: 28135657393.71981
[2025-06-04 12:50:43] 2025-06-04 09:52:52,834 | INFO     | chi2: 0.9570852395688398
[2025-06-04 12:50:43] 2025-06-04 09:52:52,834 | INFO     | current chi2=0.9570852395688398 (change=43.51930913441081 %)
[2025-06-04 12:50:43] 2025-06-04 09:52:52,835 | INFO     | sum of square deviations: 2671343110.0
[2025-06-04 12:50:43] 2025-06-04 09:52:52,836 | INFO     | sum of deviations: -41929467642.0
[2025-06-04 12:50:43] 2025-06-04 09:52:52,836 | INFO     | mean x: 1749024453.0
[2025-06-04 12:50:43] 2025-06-04 09:52:52,836 | INFO     | mean y: 2507610.7024390246
[2025-06-04 12:50:43] 2025-06-04 09:52:52,836 | INFO     | -- intersect: 27455238760.28893
[2025-06-04 12:50:43] 2025-06-04 09:52:52,837 | INFO     | intersect: 27455238760.28893
[2025-06-04 12:50:43] 2025-06-04 09:52:52,837 | INFO     | chi2: 0.9455422362653423
[2025-06-04 12:50:43] 2025-06-04 09:52:52,837 | INFO     | current chi2=0.9455422362653423 (change=1.2060580214044048 %)
[2025-06-04 12:50:43] 2025-06-04 09:52:52,837 | INFO     | left removable region: 30
[2025-06-04 12:50:43] 2025-06-04 09:52:52,837 | INFO     | sum of square deviations: 1931608310.0
[2025-06-04 12:50:43] 2025-06-04 09:52:52,839 | INFO     | sum of deviations: -5701005527.0
[2025-06-04 12:50:43] 2025-06-04 09:52:52,839 | INFO     | mean x: 1749024727.5
[2025-06-04 12:50:43] 2025-06-04 09:52:52,839 | INFO     | mean y: 2499585.413043478
[2025-06-04 12:50:43] 2025-06-04 09:52:52,839 | INFO     | -- intersect: 5164622561.751433
[2025-06-04 12:50:43] 2025-06-04 09:52:52,839 | INFO     | intersect: 5164622561.751433
[2025-06-04 12:50:43] 2025-06-04 09:52:52,840 | INFO     | chi2: 0.061785610058003704
[2025-06-04 12:50:43] 2025-06-04 09:52:52,840 | INFO     | -- intersect: 5164622561.751433
[2025-06-04 12:50:43] 2025-06-04 09:52:52,840 | INFO     | current memory leak: -2.95 B/s (using 184 data points, chi2=0.06)
[2025-06-04 12:50:43] 2025-06-04 09:52:52,841 | INFO     | ..............................
[2025-06-04 12:50:43] 2025-06-04 09:52:52,841 | INFO     | . Timing measurements:
[2025-06-04 12:50:43] 2025-06-04 09:52:52,841 | INFO     | . get job = 0 s
[2025-06-04 12:50:43] 2025-06-04 09:52:52,841 | INFO     | . initial setup = 7 s
[2025-06-04 12:50:43] 2025-06-04 09:52:52,841 | INFO     | . payload setup = 133 s
[2025-06-04 12:50:43] 2025-06-04 09:52:52,841 | INFO     | . stage-in = 0 s
[2025-06-04 12:50:43] 2025-06-04 09:52:52,841 | INFO     | . payload execution = 13511 s
[2025-06-04 12:50:43] 2025-06-04 09:52:52,841 | INFO     | . stage-out = 4 s
[2025-06-04 12:50:43] 2025-06-04 09:52:52,841 | INFO     | . log creation = 1 s
[2025-06-04 12:50:43] 2025-06-04 09:52:52,841 | INFO     | ..............................
[2025-06-04 12:50:43] 2025-06-04 09:52:52,963 | INFO     | 
[2025-06-04 12:50:43] 2025-06-04 09:52:52,963 | INFO     | job summary report
[2025-06-04 12:50:43] 2025-06-04 09:52:52,963 | INFO     | --------------------------------------------------
[2025-06-04 12:50:43] 2025-06-04 09:52:52,963 | INFO     | PanDA job id: 6677862133
[2025-06-04 12:50:43] 2025-06-04 09:52:52,963 | INFO     | task id: 45006595
[2025-06-04 12:50:43] 2025-06-04 09:52:52,963 | INFO     | errors: (none)
[2025-06-04 12:50:43] 2025-06-04 09:52:52,963 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:50:43] 2025-06-04 09:52:52,964 | INFO     | pilot state: finished 
[2025-06-04 12:50:43] 2025-06-04 09:52:52,964 | INFO     | transexitcode: 0
[2025-06-04 12:50:43] 2025-06-04 09:52:52,964 | INFO     | exeerrorcode: 0
[2025-06-04 12:50:43] 2025-06-04 09:52:52,964 | INFO     | exeerrordiag: 
[2025-06-04 12:50:43] 2025-06-04 09:52:52,964 | INFO     | exitcode: 0
[2025-06-04 12:50:43] 2025-06-04 09:52:52,964 | INFO     | exitmsg: OK
[2025-06-04 12:50:43] 2025-06-04 09:52:52,964 | INFO     | cpuconsumptiontime: 48860 s
[2025-06-04 12:50:43] 2025-06-04 09:52:52,964 | INFO     | nevents: 400
[2025-06-04 12:50:43] 2025-06-04 09:52:52,964 | INFO     | neventsw: 0
[2025-06-04 12:50:43] 2025-06-04 09:52:52,964 | INFO     | pid: 15452
[2025-06-04 12:50:43] 2025-06-04 09:52:52,964 | INFO     | pgrp: 15452
[2025-06-04 12:50:43] 2025-06-04 09:52:52,964 | INFO     | corecount: 8
[2025-06-04 12:50:43] 2025-06-04 09:52:52,965 | INFO     | event service: False
[2025-06-04 12:50:43] 2025-06-04 09:52:52,965 | INFO     | sizes: {0: 2404354, 1: 2405040, 2: 2405239, 13: 2405239, 23: 2405295, 34: 2405323, 45: 2405479, 56: 2405507, 66: 2405535, 77: 2405563, 85: 2405825, 88: 2406133, 13
[2025-06-04 12:50:43] 2025-06-04 09:52:52,965 | INFO     | --------------------------------------------------
[2025-06-04 12:50:43] 2025-06-04 09:52:52,965 | INFO     | 
[2025-06-04 12:50:43] 2025-06-04 09:52:52,965 | INFO     | executing command: ls -lF /var/lib/boinc/slots/13
[2025-06-04 12:50:43] 2025-06-04 09:52:53,530 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:50:43] 2025-06-04 09:52:53,530 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:50:43] 2025-06-04 09:52:53,530 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:50:43] 2025-06-04 09:52:53,531 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:50:43] 2025-06-04 09:52:53,531 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:50:43] 2025-06-04 09:52:53,531 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:50:43] 2025-06-04 09:52:53,531 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:50:43] 2025-06-04 09:52:53,531 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:50:43] 2025-06-04 09:52:53,531 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:50:43] 2025-06-04 09:52:53,531 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:50:43] 2025-06-04 09:52:53,531 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:50:43] 2025-06-04 09:52:53,531 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:50:43] 2025-06-04 09:52:53,531 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:50:43] 2025-06-04 09:52:53,531 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:50:43] 2025-06-04 09:52:53,531 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:50:43] 2025-06-04 09:52:53,532 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:50:43] 2025-06-04 09:52:53,532 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:50:43] 2025-06-04 09:52:53,532 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:50:43] 2025-06-04 09:52:53,532 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:50:43] 2025-06-04 09:52:53,532 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:50:43] 2025-06-04 09:52:53,532 | INFO     | job 6677862133 has completed (purged errors)
[2025-06-04 12:50:43] 2025-06-04 09:52:53,532 | INFO     | overall cleanup function is called
[2025-06-04 12:50:43] 2025-06-04 09:52:54,539 | INFO     | --- collectZombieJob: --- 10, [15452]
[2025-06-04 12:50:43] 2025-06-04 09:52:54,540 | INFO     | zombie collector waiting for pid 15452
[2025-06-04 12:50:43] 2025-06-04 09:52:54,540 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:50:43] 2025-06-04 09:52:54,540 | INFO     | collected zombie processes
[2025-06-04 12:50:43] 2025-06-04 09:52:54,540 | INFO     | will attempt to kill all subprocesses of pid=15452
[2025-06-04 12:50:43] 2025-06-04 09:52:54,655 | INFO     | process IDs to be killed: [15452] (in reverse order)
[2025-06-04 12:50:43] 2025-06-04 09:52:55,154 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:50:43] 2025-06-04 09:52:55,154 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:50:43] 2025-06-04 09:52:55,158 | INFO     | did not find any defunct processes belonging to 15452
[2025-06-04 12:50:43] 2025-06-04 09:52:55,161 | INFO     | did not find any defunct processes belonging to 15452
[2025-06-04 12:50:43] 2025-06-04 09:52:55,162 | INFO     | ready for new job
[2025-06-04 12:50:43] 2025-06-04 09:52:55,162 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:50:43] 2025-06-04 09:52:55,164 | INFO     | **************************************
[2025-06-04 12:50:43] 2025-06-04 09:52:55,164 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:50:43] 2025-06-04 09:52:55,164 | INFO     | **************************************
[2025-06-04 12:50:43] 2025-06-04 09:52:55,164 | INFO     | 
[2025-06-04 12:50:43] 2025-06-04 09:52:55,165 | INFO     | pilot is running in a VM
[2025-06-04 12:50:43] 2025-06-04 09:52:55,165 | INFO     | architecture information:
[2025-06-04 12:50:43] 2025-06-04 09:52:55,165 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:50:43] 2025-06-04 09:52:55,454 | INFO     | cat /etc/os-release:
[2025-06-04 12:50:43] NAME="CentOS Linux"
[2025-06-04 12:50:43] VERSION="7 (Core)"
[2025-06-04 12:50:43] ID="centos"
[2025-06-04 12:50:43] ID_LIKE="rhel fedora"
[2025-06-04 12:50:43] VERSION_ID="7"
[2025-06-04 12:50:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:50:43] ANSI_COLOR="0;31"
[2025-06-04 12:50:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:50:43] HOME_URL="https://www.centos.org/"
[2025-06-04 12:50:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:50:43] 
[2025-06-04 12:50:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:50:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:50:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:50:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:50:43] 
[2025-06-04 12:50:43] 2025-06-04 09:52:55,454 | INFO     | **************************************
[2025-06-04 12:50:43] 2025-06-04 09:52:55,958 | INFO     | executing command: df -mP /var/lib/boinc/slots/13
[2025-06-04 12:50:43] 2025-06-04 09:52:56,222 | INFO     | sufficient remaining disk space (496587767808 B)
[2025-06-04 12:50:43] 2025-06-04 09:52:56,222 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:50:43] 2025-06-04 09:52:56,223 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:50:43] 2025-06-04 09:52:56,223 | INFO     | update_server=False
[2025-06-04 12:50:43] 2025-06-04 09:52:56,223 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:50:43] 2025-06-04 09:52:56,223 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:50:43] 2025-06-04 09:52:56,224 | INFO     | aborting loop
[2025-06-04 12:50:43] 2025-06-04 09:52:56,224 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:50:43] 2025-06-04 09:52:56,371 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:50:43] 2025-06-04 09:52:56,701 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:50:43] 2025-06-04 09:52:56,701 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:50:43] 2025-06-04 09:52:56,701 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:50:43] 2025-06-04 09:52:56,809 | INFO     | all payload control threads have been joined
[2025-06-04 12:50:43] 2025-06-04 09:52:56,943 | INFO     | all data control threads have been joined
[2025-06-04 12:50:43] 2025-06-04 09:52:57,229 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:50:43] 2025-06-04 09:52:57,229 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:50:43] 2025-06-04 09:52:57,370 | INFO     | [job] validate thread has finished
[2025-06-04 12:50:43] 2025-06-04 09:52:57,397 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:50:43] 2025-06-04 09:52:57,563 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:50:43] 2025-06-04 09:52:57,724 | INFO     | all job control threads have been joined
[2025-06-04 12:50:43] 2025-06-04 09:52:57,816 | INFO     | [payload] control thread has finished
[2025-06-04 12:50:43] 2025-06-04 09:52:57,826 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:50:43] 2025-06-04 09:52:57,950 | INFO     | [data] control thread has finished
[2025-06-04 12:50:43] 2025-06-04 09:52:57,979 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:50:43] 2025-06-04 09:52:58,071 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:50:43] 2025-06-04 09:52:58,276 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:50:43] 2025-06-04 09:52:58,379 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:50:43] 2025-06-04 09:52:58,437 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:50:43] 2025-06-04 09:52:58,665 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:50:43] 2025-06-04 09:52:58,731 | INFO     | [job] control thread has finished
[2025-06-04 12:50:43] 2025-06-04 09:52:58,987 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:50:43] 2025-06-04 09:53:00,233 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:50:43] 2025-06-04 09:53:00,359 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140558070896448)>', '<ExcThread(monitor, started 140557493987072)>']
[2025-06-04 12:50:43] 2025-06-04 09:53:00,725 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:50:43] 2025-06-04 09:53:00,726 | INFO     | [monitor] control thread has ended
[2025-06-04 12:50:43] 2025-06-04 09:53:05,384 | INFO     | all workflow threads have been joined
[2025-06-04 12:50:43] 2025-06-04 09:53:05,385 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:50:43] 2025-06-04 09:53:05,385 | INFO     | traces error code: 0
[2025-06-04 12:50:43] 2025-06-04 09:53:05,385 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:50:43] 2025-06-04 09:53:05,770 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:50:43] 2025-06-04 09:53:05,838 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:50:43] 2025-06-04 09:53:05,907 [wrapper] pilotpid: 5483
[2025-06-04 12:50:43] 2025-06-04 09:53:06,021 [wrapper] Pilot exit status: 0
[2025-06-04 12:50:43] 2025-06-04 09:53:06,401 [wrapper] pandaids: 6677862133
[2025-06-04 12:50:43] 2025-06-04 09:53:06,944 [wrapper] cleanup supervisor_pilot  8650 5484
[2025-06-04 12:50:43] 2025-06-04 09:53:07,001 [wrapper] Test setup, not cleaning
[2025-06-04 12:50:43] 2025-06-04 09:53:07,108 [wrapper] apfmon messages muted
[2025-06-04 12:50:43] 2025-06-04 09:53:07,186 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:50:43] 2025-06-04 09:53:07,228 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:50:43]  *** Error codes and diagnostics ***
[2025-06-04 12:50:43]     "exeErrorCode": 0,
[2025-06-04 12:50:43]     "exeErrorDiag": "",
[2025-06-04 12:50:43]     "pilotErrorCode": 0,
[2025-06-04 12:50:43]     "pilotErrorDiag": "",
[2025-06-04 12:50:43]  *** Listing of results directory ***
[2025-06-04 12:50:43] total 389832
[2025-06-04 12:50:43] -rw-r--r--. 1 boinc boinc    495897 Jun  3 18:58 pilot3.tar.gz
[2025-06-04 12:50:43] -rw-r--r--. 1 boinc boinc      5111 Jun  3 19:20 queuedata.json
[2025-06-04 12:50:43] -rwx------. 1 boinc boinc     37140 Jun  3 19:22 runpilot2-wrapper.sh
[2025-06-04 12:50:43] -rw-r--r--. 1 boinc boinc       100 Jun  4 07:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:50:43] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 07:46 run_atlas
[2025-06-04 12:50:43] -rw-r--r--. 1 boinc boinc       105 Jun  4 07:46 job.xml
[2025-06-04 12:50:43] -rw-r--r--. 1 boinc boinc      6392 Jun  4 07:46 init_data.xml
[2025-06-04 12:50:43] -rw-r--r--. 2 boinc boinc 215479144 Jun  4 07:46 EVNT.45006593._001614.pool.root.1
[2025-06-04 12:50:43] -rw-r--r--. 2 boinc boinc     15093 Jun  4 07:46 start_atlas.sh
[2025-06-04 12:50:43] drwxrwx--x. 2 boinc boinc        68 Jun  4 07:46 shared
[2025-06-04 12:50:43] -rw-r--r--. 2 boinc boinc    508872 Jun  4 07:46 input.tar.gz
[2025-06-04 12:50:43] -rw-r--r--. 1 boinc boinc         0 Jun  4 07:46 boinc_lockfile
[2025-06-04 12:50:43] -rw-r--r--. 1 boinc boinc      2524 Jun  4 07:58 pandaJob.out
[2025-06-04 12:50:43] -rw-------. 1 boinc boinc    986745 Jun  4 08:01 agis_schedconf.cvmfs.json
[2025-06-04 12:50:43] drwx------. 4 boinc boinc      4096 Jun  4 08:01 pilot3
[2025-06-04 12:50:43] -rw-------. 1 boinc boinc 176774136 Jun  4 11:50 HITS.45006595._040269.pool.root.1
[2025-06-04 12:50:43] -rw-r--r--. 1 boinc boinc       531 Jun  4 11:50 boinc_task_state.xml
[2025-06-04 12:50:43] -rw-------. 1 boinc boinc      1019 Jun  4 11:51 memory_monitor_summary.json
[2025-06-04 12:50:43] -rw-------. 1 boinc boinc   1603667 Jun  4 11:51 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:50:43] -rw-------. 1 boinc boinc    368737 Jun  4 11:51 log.45006595._040269.job.log.tgz.1
[2025-06-04 12:50:43] -rw-------. 1 boinc boinc        95 Jun  4 11:52 pilot_heartbeat.json
[2025-06-04 12:50:43] -rw-------. 1 boinc boinc      7688 Jun  4 11:52 heartbeat.json
[2025-06-04 12:50:43] -rw-------. 1 boinc boinc      4417 Jun  4 11:53 pilotlog.txt
[2025-06-04 12:50:43] -rw-------. 1 boinc boinc   1186601 Jun  4 11:53 log.45006595._040269.job.log.1
[2025-06-04 12:50:43] -rw-------. 1 boinc boinc       357 Jun  4 11:53 output.list
[2025-06-04 12:50:43] -rw-r--r--. 1 boinc boinc       620 Jun  4 11:53 runtime_log
[2025-06-04 12:50:43] -rw-------. 1 boinc boinc   1576960 Jun  4 11:53 result.tar.gz
[2025-06-04 12:50:43] -rw-------. 1 boinc boinc       657 Jun  4 11:53 vSKODmEWkg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxKlKDmBcRlnn.diag
[2025-06-04 12:50:43] -rw-r--r--. 1 boinc boinc      8673 Jun  4 11:53 runtime_log.err
[2025-06-04 12:50:43] -rw-r--r--. 1 boinc boinc      8192 Jun  4 12:50 boinc_mmap_file
[2025-06-04 12:50:43] -rw-r--r--. 1 boinc boinc        28 Jun  4 12:50 wrapper_checkpoint.txt
[2025-06-04 12:50:43] -rw-r--r--. 1 boinc boinc     20525 Jun  4 12:50 stderr.txt
[2025-06-04 12:50:43] HITS file was successfully produced:
[2025-06-04 12:50:43] -rw-------. 1 boinc boinc 176774136 Jun  4 11:50 shared/HITS.pool.root.1
[2025-06-04 12:50:43]  *** Contents of shared directory: ***
[2025-06-04 12:50:43] total 385120
[2025-06-04 12:50:43] -rw-r--r--. 2 boinc boinc 215479144 Jun  4 07:46 ATLAS.root_0
[2025-06-04 12:50:43] -rw-r--r--. 2 boinc boinc     15093 Jun  4 07:46 start_atlas.sh
[2025-06-04 12:50:43] -rw-r--r--. 2 boinc boinc    508872 Jun  4 07:46 input.tar.gz
[2025-06-04 12:50:43] -rw-------. 1 boinc boinc 176774136 Jun  4 11:50 HITS.pool.root.1
[2025-06-04 12:50:43] -rw-------. 1 boinc boinc   1576960 Jun  4 11:53 result.tar.gz
12:50:45 (25846): run_atlas exited; CPU time 49047.337297
12:50:45 (25846): called boinc_finish(0)

</stderr_txt>
]]>

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