Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:50:37 (1961007): wrapper (7.7.26015): starting
19:50:37 (1961007): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 19:50:37] Arguments: --nthreads 4
[2025-06-06 19:50:37] Threads: 4
[2025-06-06 19:50:37] Checking for CVMFS
[2025-06-06 19:50:37] No cvmfs_config command found, will try listing directly
[2025-06-06 19:50:37] CVMFS is ok
[2025-06-06 19:50:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 19:50:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 19:50:37] Further information can be found at the LHC@home message board.
[2025-06-06 19:50:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 19:50:37] Checking for apptainer binary...
[2025-06-06 19:50:37] which: no apptainer in ((null))
[2025-06-06 19:50:37] apptainer is not installed, using version from CVMFS
[2025-06-06 19:50:37] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 19:50:37] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-06-06 19:50:37] apptainer works
[2025-06-06 19:50:37] Set ATHENA_PROC_NUMBER=4
[2025-06-06 19:50:37] Set ATHENA_CORE_NUMBER=4
[2025-06-06 19:50:37] Starting ATLAS job with PandaID=6677733498
[2025-06-06 19:50:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 21:14:31]  *** The last 200 lines of the pilot log: ***
[2025-06-06 21:14:31]  domain=
[2025-06-06 21:14:31]  filesize=235348
[2025-06-06 21:14:31]  filetype=log
[2025-06-06 21:14:31]  guid=56a2a13e-879a-40a4-979f-7dccad2c3b52
[2025-06-06 21:14:31]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-06 21:14:31]  is_altstaged=None
[2025-06-06 21:14:31]  is_tar=False
[2025-06-06 21:14:31]  lfn=log.45006595._037486.job.log.tgz.1
[2025-06-06 21:14:31]  mtime=0
[2025-06-06 21:14:31]  protocol_id=None
[2025-06-06 21:14:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 21:14:31]  replicas=None
[2025-06-06 21:14:31]  scope=mc23_13p6TeV
[2025-06-06 21:14:31]  status=None
[2025-06-06 21:14:31]  status_code=0
[2025-06-06 21:14:31]  storage_token=
[2025-06-06 21:14:31]  surl=/scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6677733498/log.45006595._037486.job.log.tgz.1
[2025-06-06 21:14:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/51/0d/log.45006595._037486.job.log.tgz.1
[2025-06-06 21:14:31]  workdir=None
[2025-06-06 21:14:31] ]
[2025-06-06 21:14:31] 2025-06-06 19:14:08,048 | INFO     | transferring file log.45006595._037486.job.log.tgz.1 from /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6677733498/log.45006595._037486.job.log.tgz.1 to /scratch/b
[2025-06-06 21:14:31] 2025-06-06 19:14:08,049 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6677733498/log.45006595._037486.job.log.tgz.1 /scratch/boinc/var/slot36/slots/0/lo
[2025-06-06 21:14:31] 2025-06-06 19:14:08,061 | INFO     | adding to output.list: log.45006595._037486.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/51/0d/log.45006595._037486.job.log.tg
[2025-06-06 21:14:31] 2025-06-06 19:14:08,062 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 21:14:31] 2025-06-06 19:14:08,062 | INFO     | summary of transferred files:
[2025-06-06 21:14:31] 2025-06-06 19:14:08,062 | INFO     |  -- lfn=log.45006595._037486.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 21:14:31] 2025-06-06 19:14:08,062 | INFO     | stage-out finished correctly
[2025-06-06 21:14:31] 2025-06-06 19:14:08,486 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 21:14:31] 2025-06-06 19:14:08,568 | INFO     | job 6677733498 has state=finished
[2025-06-06 21:14:31] 2025-06-06 19:14:08,568 | INFO     | preparing for final server update for job 6677733498 in state='finished'
[2025-06-06 21:14:31] 2025-06-06 19:14:08,568 | INFO     | this job has now completed (state=finished)
[2025-06-06 21:14:31] 2025-06-06 19:14:08,568 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 21:14:31] 2025-06-06 19:14:08,568 | INFO     | log transfer has been attempted: DONE
[2025-06-06 21:14:31] 2025-06-06 19:14:08,568 | INFO     | job 6677733498 has finished - writing final server update
[2025-06-06 21:14:31] 2025-06-06 19:14:08,569 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_752660/.job.ad'
[2025-06-06 21:14:31] 2025-06-06 19:14:08,569 | INFO     | total number of processed events: 400 (read)
[2025-06-06 21:14:31] 2025-06-06 19:14:08,571 | INFO     | executing command: lscpu
[2025-06-06 21:14:31] 2025-06-06 19:14:08,610 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 21:14:31] 2025-06-06 19:14:10,020 | INFO     | monitor loop #380: job 0:6677733498 is in state 'finished'
[2025-06-06 21:14:31] 2025-06-06 19:14:10,021 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 21:14:31] 2025-06-06 19:14:11,059 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 21:14:31] 2025-06-06 19:14:11,060 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6677733498/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 21:14:31] 2025-06-06 19:14:11,060 | INFO     | extracted standard info from prmon json
[2025-06-06 21:14:31] 2025-06-06 19:14:11,060 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 21:14:31] 2025-06-06 19:14:11,060 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 21:14:31] 2025-06-06 19:14:11,061 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 21:14:31] 2025-06-06 19:14:11,061 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 21:14:31] 2025-06-06 19:14:11,062 | INFO     | fitting pss+swap vs Time
[2025-06-06 21:14:31] 2025-06-06 19:14:11,062 | INFO     | sum of square deviations: 130793150.0
[2025-06-06 21:14:31] 2025-06-06 19:14:11,063 | INFO     | sum of deviations: -14821358246.0
[2025-06-06 21:14:31] 2025-06-06 19:14:11,063 | INFO     | mean x: 1749234827.0
[2025-06-06 21:14:31] 2025-06-06 19:14:11,063 | INFO     | mean y: 2496430.0
[2025-06-06 21:14:31] 2025-06-06 19:14:11,063 | INFO     | -- intersect: 198224161917.4268
[2025-06-06 21:14:31] 2025-06-06 19:14:11,063 | INFO     | intersect: 198224161917.4268
[2025-06-06 21:14:31] 2025-06-06 19:14:11,063 | INFO     | chi2: 0.03942345147841314
[2025-06-06 21:14:31] 2025-06-06 19:14:11,063 | INFO     | -- intersect: 198224161917.4268
[2025-06-06 21:14:31] 2025-06-06 19:14:11,063 | INFO     | current memory leak: -113.32 B/s (using 75 data points, chi2=0.04)
[2025-06-06 21:14:31] 2025-06-06 19:14:11,063 | INFO     | ..............................
[2025-06-06 21:14:31] 2025-06-06 19:14:11,064 | INFO     | . Timing measurements:
[2025-06-06 21:14:31] 2025-06-06 19:14:11,064 | INFO     | . get job = 0 s
[2025-06-06 21:14:31] 2025-06-06 19:14:11,064 | INFO     | . initial setup = 1 s
[2025-06-06 21:14:31] 2025-06-06 19:14:11,064 | INFO     | . payload setup = 4 s
[2025-06-06 21:14:31] 2025-06-06 19:14:11,064 | INFO     | . stage-in = 0 s
[2025-06-06 21:14:31] 2025-06-06 19:14:11,064 | INFO     | . payload execution = 4982 s
[2025-06-06 21:14:31] 2025-06-06 19:14:11,064 | INFO     | . stage-out = 0 s
[2025-06-06 21:14:31] 2025-06-06 19:14:11,064 | INFO     | . log creation = 0 s
[2025-06-06 21:14:31] 2025-06-06 19:14:11,064 | INFO     | ..............................
[2025-06-06 21:14:31] 2025-06-06 19:14:11,113 | INFO     | 
[2025-06-06 21:14:31] 2025-06-06 19:14:11,113 | INFO     | job summary report
[2025-06-06 21:14:31] 2025-06-06 19:14:11,113 | INFO     | --------------------------------------------------
[2025-06-06 21:14:31] 2025-06-06 19:14:11,113 | INFO     | PanDA job id: 6677733498
[2025-06-06 21:14:31] 2025-06-06 19:14:11,113 | INFO     | task id: 45006595
[2025-06-06 21:14:31] 2025-06-06 19:14:11,113 | INFO     | errors: (none)
[2025-06-06 21:14:31] 2025-06-06 19:14:11,113 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 21:14:31] 2025-06-06 19:14:11,113 | INFO     | pilot state: finished 
[2025-06-06 21:14:31] 2025-06-06 19:14:11,114 | INFO     | transexitcode: 0
[2025-06-06 21:14:31] 2025-06-06 19:14:11,114 | INFO     | exeerrorcode: 0
[2025-06-06 21:14:31] 2025-06-06 19:14:11,114 | INFO     | exeerrordiag: 
[2025-06-06 21:14:31] 2025-06-06 19:14:11,114 | INFO     | exitcode: 0
[2025-06-06 21:14:31] 2025-06-06 19:14:11,114 | INFO     | exitmsg: OK
[2025-06-06 21:14:31] 2025-06-06 19:14:11,114 | INFO     | cpuconsumptiontime: 18899 s
[2025-06-06 21:14:31] 2025-06-06 19:14:11,114 | INFO     | nevents: 400
[2025-06-06 21:14:31] 2025-06-06 19:14:11,114 | INFO     | neventsw: 0
[2025-06-06 21:14:31] 2025-06-06 19:14:11,114 | INFO     | pid: 1971715
[2025-06-06 21:14:31] 2025-06-06 19:14:11,114 | INFO     | pgrp: 1971715
[2025-06-06 21:14:31] 2025-06-06 19:14:11,114 | INFO     | corecount: 4
[2025-06-06 21:14:31] 2025-06-06 19:14:11,114 | INFO     | event service: False
[2025-06-06 21:14:31] 2025-06-06 19:14:11,114 | INFO     | sizes: {0: 2397351, 3: 2397557, 11: 2397585, 4990: 2423877, 4991: 2432840, 4992: 2432896, 4994: 2433194}
[2025-06-06 21:14:31] 2025-06-06 19:14:11,114 | INFO     | --------------------------------------------------
[2025-06-06 21:14:31] 2025-06-06 19:14:11,114 | INFO     | 
[2025-06-06 21:14:31] 2025-06-06 19:14:11,114 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2025-06-06 21:14:31] 2025-06-06 19:14:11,127 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 21:14:31] 2025-06-06 19:14:11,128 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 21:14:31] 2025-06-06 19:14:11,128 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 21:14:31] 2025-06-06 19:14:11,128 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 21:14:31] 2025-06-06 19:14:11,128 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 21:14:31] 2025-06-06 19:14:11,128 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 21:14:31] 2025-06-06 19:14:11,128 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 21:14:31] 2025-06-06 19:14:11,128 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 21:14:31] 2025-06-06 19:14:11,128 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 21:14:31] 2025-06-06 19:14:11,128 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 21:14:31] 2025-06-06 19:14:11,128 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 21:14:31] 2025-06-06 19:14:11,128 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 21:14:31] 2025-06-06 19:14:11,128 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 21:14:31] 2025-06-06 19:14:11,128 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 21:14:31] 2025-06-06 19:14:11,128 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 21:14:31] 2025-06-06 19:14:11,128 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 21:14:31] 2025-06-06 19:14:11,128 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 21:14:31] 2025-06-06 19:14:11,128 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 21:14:31] 2025-06-06 19:14:11,128 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 21:14:31] 2025-06-06 19:14:11,128 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 21:14:31] 2025-06-06 19:14:11,129 | INFO     | job 6677733498 has completed (purged errors)
[2025-06-06 21:14:31] 2025-06-06 19:14:11,129 | INFO     | overall cleanup function is called
[2025-06-06 21:14:31] 2025-06-06 19:14:12,135 | INFO     | --- collectZombieJob: --- 10, [1971715]
[2025-06-06 21:14:31] 2025-06-06 19:14:12,136 | INFO     | zombie collector waiting for pid 1971715
[2025-06-06 21:14:31] 2025-06-06 19:14:12,136 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 21:14:31] 2025-06-06 19:14:12,136 | INFO     | collected zombie processes
[2025-06-06 21:14:31] 2025-06-06 19:14:12,136 | INFO     | will attempt to kill all subprocesses of pid=1971715
[2025-06-06 21:14:31] 2025-06-06 19:14:12,268 | INFO     | process IDs to be killed: [1971715] (in reverse order)
[2025-06-06 21:14:31] 2025-06-06 19:14:12,319 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 21:14:31] 2025-06-06 19:14:12,320 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 21:14:31] 2025-06-06 19:14:12,325 | INFO     | did not find any defunct processes belonging to 1971715
[2025-06-06 21:14:31] 2025-06-06 19:14:12,329 | INFO     | did not find any defunct processes belonging to 1971715
[2025-06-06 21:14:31] 2025-06-06 19:14:12,329 | INFO     | ready for new job
[2025-06-06 21:14:31] 2025-06-06 19:14:12,329 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 21:14:31] 2025-06-06 19:14:12,330 | INFO     | **************************************
[2025-06-06 21:14:31] 2025-06-06 19:14:12,330 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 21:14:31] 2025-06-06 19:14:12,330 | INFO     | **************************************
[2025-06-06 21:14:31] 2025-06-06 19:14:12,330 | INFO     | 
[2025-06-06 21:14:31] 2025-06-06 19:14:12,333 | INFO     | architecture information:
[2025-06-06 21:14:31] 2025-06-06 19:14:12,333 | INFO     | executing command: cat /etc/os-release
[2025-06-06 21:14:31] 2025-06-06 19:14:12,343 | INFO     | cat /etc/os-release:
[2025-06-06 21:14:31] NAME="CentOS Linux"
[2025-06-06 21:14:31] VERSION="7 (Core)"
[2025-06-06 21:14:31] ID="centos"
[2025-06-06 21:14:31] ID_LIKE="rhel fedora"
[2025-06-06 21:14:31] VERSION_ID="7"
[2025-06-06 21:14:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 21:14:31] ANSI_COLOR="0;31"
[2025-06-06 21:14:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 21:14:31] HOME_URL="https://www.centos.org/"
[2025-06-06 21:14:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 21:14:31] 
[2025-06-06 21:14:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 21:14:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 21:14:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 21:14:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 21:14:31] 
[2025-06-06 21:14:31] 2025-06-06 19:14:12,343 | INFO     | **************************************
[2025-06-06 21:14:31] 2025-06-06 19:14:12,846 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2025-06-06 21:14:31] 2025-06-06 19:14:12,857 | INFO     | sufficient remaining disk space (709720276992 B)
[2025-06-06 21:14:31] 2025-06-06 19:14:12,857 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 21:14:31] 2025-06-06 19:14:12,857 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 21:14:31] 2025-06-06 19:14:12,857 | INFO     | update_server=False
[2025-06-06 21:14:31] 2025-06-06 19:14:12,857 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 21:14:31] 2025-06-06 19:14:12,857 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 21:14:31] 2025-06-06 19:14:12,950 | INFO     | all payload control threads have been joined
[2025-06-06 21:14:31] 2025-06-06 19:14:13,176 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 21:14:31] 2025-06-06 19:14:13,177 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 21:14:31] 2025-06-06 19:14:13,177 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 21:14:31] 2025-06-06 19:14:13,529 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 21:14:31] 2025-06-06 19:14:13,529 | INFO     | aborting loop
[2025-06-06 21:14:31] 2025-06-06 19:14:13,617 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 21:14:31] 2025-06-06 19:14:13,678 | INFO     | all data control threads have been joined
[2025-06-06 21:14:31] 2025-06-06 19:14:13,862 | INFO     | [job] queue monitor thread has finished
[2025-06-06 21:14:31] 2025-06-06 19:14:13,862 | INFO     | [job] retrieve thread has finished
[2025-06-06 21:14:31] 2025-06-06 19:14:13,951 | INFO     | [payload] control thread has finished
[2025-06-06 21:14:31] 2025-06-06 19:14:14,038 | INFO     | all job control threads have been joined
[2025-06-06 21:14:31] 2025-06-06 19:14:14,130 | INFO     | [payload] failed_post thread has finished
[2025-06-06 21:14:31] 2025-06-06 19:14:14,534 | INFO     | [job] job monitor thread has finished
[2025-06-06 21:14:31] 2025-06-06 19:14:14,537 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 21:14:31] 2025-06-06 19:14:14,558 | INFO     | [data] copytool_in thread has finished
[2025-06-06 21:14:31] 2025-06-06 19:14:14,559 | INFO     | [job] validate thread has finished
[2025-06-06 21:14:31] 2025-06-06 19:14:14,668 | INFO     | [payload] validate_post thread has finished
[2025-06-06 21:14:31] 2025-06-06 19:14:14,683 | INFO     | [data] control thread has finished
[2025-06-06 21:14:31] 2025-06-06 19:14:14,763 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 21:14:31] 2025-06-06 19:14:14,863 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 21:14:31] 2025-06-06 19:14:15,043 | INFO     | [job] control thread has finished
[2025-06-06 21:14:31] 2025-06-06 19:14:15,295 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 21:14:31] 2025-06-06 19:14:15,622 | INFO     | [data] copytool_out thread has finished
[2025-06-06 21:14:31] 2025-06-06 19:14:18,543 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 21:14:31] 2025-06-06 19:14:23,851 | INFO     | job.realtimelogging is not enabled
[2025-06-06 21:14:31] 2025-06-06 19:14:24,856 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 21:14:31] 2025-06-06 19:14:26,217 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22981382485824)>', '<ExcThread(monitor, started 22981143131904)>']
[2025-06-06 21:14:31] 2025-06-06 19:14:26,238 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 21:14:31] 2025-06-06 19:14:26,239 | INFO     | [monitor] control thread has ended
[2025-06-06 21:14:31] 2025-06-06 19:14:31,242 | INFO     | all workflow threads have been joined
[2025-06-06 21:14:31] 2025-06-06 19:14:31,243 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 21:14:31] 2025-06-06 19:14:31,243 | INFO     | traces error code: 0
[2025-06-06 21:14:31] 2025-06-06 19:14:31,243 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 21:14:31] 2025-06-06 19:14:31,334 [wrapper] ==== pilot stdout END ====
[2025-06-06 21:14:31] 2025-06-06 19:14:31,337 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 21:14:31] 2025-06-06 19:14:31,338 [wrapper] pilotpid: 1964738
[2025-06-06 21:14:31] 2025-06-06 19:14:31,340 [wrapper] Pilot exit status: 0
[2025-06-06 21:14:31] 2025-06-06 19:14:31,347 [wrapper] pandaids: 6677733498
[2025-06-06 21:14:31] 2025-06-06 19:14:31,378 [wrapper] cleanup supervisor_pilot 2087529 1964739
[2025-06-06 21:14:31] 2025-06-06 19:14:31,380 [wrapper] Test setup, not cleaning
[2025-06-06 21:14:31] 2025-06-06 19:14:31,382 [wrapper] apfmon messages muted
[2025-06-06 21:14:31] 2025-06-06 19:14:31,384 [wrapper] ==== wrapper stdout END ====
[2025-06-06 21:14:31] 2025-06-06 19:14:31,385 [wrapper] ==== wrapper stderr END ====
[2025-06-06 21:14:31]  *** Error codes and diagnostics ***
[2025-06-06 21:14:31]     "exeErrorCode": 0,
[2025-06-06 21:14:31]     "exeErrorDiag": "",
[2025-06-06 21:14:31]     "pilotErrorCode": 0,
[2025-06-06 21:14:31]     "pilotErrorDiag": "",
[2025-06-06 21:14:31]  *** Listing of results directory ***
[2025-06-06 21:14:31] total 384328
[2025-06-06 21:14:31] -rw-r--r-- 1 boinc boinc    495897 Jun  3 17:35 pilot3.tar.gz
[2025-06-06 21:14:31] -rwx------ 1 boinc boinc     37140 Jun  3 17:46 runpilot2-wrapper.sh
[2025-06-06 21:14:31] -rw-r--r-- 1 boinc boinc      5111 Jun  3 17:46 queuedata.json
[2025-06-06 21:14:31] -rw-r--r-- 1 boinc boinc       100 Jun  6 19:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 21:14:31] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 19:50 run_atlas
[2025-06-06 21:14:31] -rw-r--r-- 1 boinc boinc       105 Jun  6 19:50 job.xml
[2025-06-06 21:14:31] -rw-r--r-- 2 boinc boinc 218179896 Jun  6 19:50 EVNT.45006593._001505.pool.root.1
[2025-06-06 21:14:31] -rw-r--r-- 2 boinc boinc     15093 Jun  6 19:50 start_atlas.sh
[2025-06-06 21:14:31] drwxrwx--x 2 boinc boinc      4096 Jun  6 19:50 shared
[2025-06-06 21:14:31] -rw-r--r-- 2 boinc boinc    508879 Jun  6 19:50 input.tar.gz
[2025-06-06 21:14:31] -rw-r--r-- 1 boinc boinc      6635 Jun  6 19:50 init_data.xml
[2025-06-06 21:14:31] -rw-r--r-- 1 boinc boinc         0 Jun  6 19:50 boinc_lockfile
[2025-06-06 21:14:31] -rw-r--r-- 1 boinc boinc      2524 Jun  6 19:50 pandaJob.out
[2025-06-06 21:14:31] -rw------- 1 boinc boinc    985748 Jun  6 19:50 agis_schedconf.cvmfs.json
[2025-06-06 21:14:31] -rw------- 1 boinc boinc   1598969 Jun  6 19:50 agis_ddmendpoints.agis.ALL.json
[2025-06-06 21:14:31] drwx------ 4 boinc boinc      4096 Jun  6 19:50 pilot3
[2025-06-06 21:14:31] -rw------- 1 boinc boinc        95 Jun  6 21:13 pilot_heartbeat.json
[2025-06-06 21:14:31] -rw------- 1 boinc boinc 170058673 Jun  6 21:13 HITS.45006595._037486.pool.root.1
[2025-06-06 21:14:31] -rw-r--r-- 1 boinc boinc       530 Jun  6 21:13 boinc_task_state.xml
[2025-06-06 21:14:31] -rw------- 1 boinc boinc      1031 Jun  6 21:14 memory_monitor_summary.json
[2025-06-06 21:14:31] -rw------- 1 boinc boinc    235348 Jun  6 21:14 log.45006595._037486.job.log.tgz.1
[2025-06-06 21:14:31] -rw------- 1 boinc boinc      7723 Jun  6 21:14 heartbeat.json
[2025-06-06 21:14:31] -rw-r--r-- 1 boinc boinc      8192 Jun  6 21:14 boinc_mmap_file
[2025-06-06 21:14:31] -rw-r--r-- 1 boinc boinc        27 Jun  6 21:14 wrapper_checkpoint.txt
[2025-06-06 21:14:31] -rw------- 1 boinc boinc      4435 Jun  6 21:14 pilotlog.txt
[2025-06-06 21:14:31] -rw------- 1 boinc boinc    503935 Jun  6 21:14 log.45006595._037486.job.log.1
[2025-06-06 21:14:31] -rw------- 1 boinc boinc       357 Jun  6 21:14 output.list
[2025-06-06 21:14:31] -rw-r--r-- 1 boinc boinc       620 Jun  6 21:14 runtime_log
[2025-06-06 21:14:31] -rw------- 1 boinc boinc    757760 Jun  6 21:14 result.tar.gz
[2025-06-06 21:14:31] -rw-r--r-- 1 boinc boinc      9025 Jun  6 21:14 runtime_log.err
[2025-06-06 21:14:31] -rw------- 1 boinc boinc       660 Jun  6 21:14 f9eKDm70ig7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjtkKDmbYy0yn.diag
[2025-06-06 21:14:31] -rw-r--r-- 1 boinc boinc     20836 Jun  6 21:14 stderr.txt
[2025-06-06 21:14:31] HITS file was successfully produced:
[2025-06-06 21:14:31] -rw------- 1 boinc boinc 170058673 Jun  6 21:13 shared/HITS.pool.root.1
[2025-06-06 21:14:31]  *** Contents of shared directory: ***
[2025-06-06 21:14:31] total 380408
[2025-06-06 21:14:31] -rw-r--r-- 2 boinc boinc 218179896 Jun  6 19:50 ATLAS.root_0
[2025-06-06 21:14:31] -rw-r--r-- 2 boinc boinc     15093 Jun  6 19:50 start_atlas.sh
[2025-06-06 21:14:31] -rw-r--r-- 2 boinc boinc    508879 Jun  6 19:50 input.tar.gz
[2025-06-06 21:14:31] -rw------- 1 boinc boinc 170058673 Jun  6 21:13 HITS.pool.root.1
[2025-06-06 21:14:31] -rw------- 1 boinc boinc    757760 Jun  6 21:14 result.tar.gz
21:14:32 (1961007): run_atlas exited; CPU time 18962.278301
21:14:32 (1961007): called boinc_finish(0)

</stderr_txt>
]]>

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