Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:13:53 (2661377): wrapper (7.7.26015): starting
06:13:53 (2661377): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 06:13:53] Arguments: --nthreads 4
[2025-06-05 06:13:53] Threads: 4
[2025-06-05 06:13:53] Checking for CVMFS
[2025-06-05 06:13:53] No cvmfs_config command found, will try listing directly
[2025-06-05 06:13:53] CVMFS is ok
[2025-06-05 06:13:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 06:13:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 06:13:53] Further information can be found at the LHC@home message board.
[2025-06-05 06:13:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 06:13:53] Checking for apptainer binary...
[2025-06-05 06:13:53] which: no apptainer in ((null))
[2025-06-05 06:13:53] apptainer is not installed, using version from CVMFS
[2025-06-05 06:13:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 06:13:54] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot104/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-06-05 06:13:54] apptainer works
[2025-06-05 06:13:54] Set ATHENA_PROC_NUMBER=4
[2025-06-05 06:13:54] Set ATHENA_CORE_NUMBER=4
[2025-06-05 06:13:54] Starting ATLAS job with PandaID=6677733667
[2025-06-05 06:13:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot104/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 08:37:35]  *** The last 200 lines of the pilot log: ***
[2025-06-05 08:37:35] 2025-06-05 06:37:04,728 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 08:37:35] 2025-06-05 06:37:06,037 | INFO     | PID=2665402 has CPU usage=21.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 08:37:35] 2025-06-05 06:37:06,037 | INFO     | .. there are 15 such processes running
[2025-06-05 08:37:35] 2025-06-05 06:37:06,121 | INFO     | monitor loop #589: job 0:6677733667 is in state 'finished'
[2025-06-05 08:37:35] 2025-06-05 06:37:06,121 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:37:35] 2025-06-05 06:37:07,038 | INFO     | 8581s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-05 08:37:35] 2025-06-05 06:37:08,624 | INFO     | monitor loop #590: job 0:6677733667 is in state 'finished'
[2025-06-05 08:37:35] 2025-06-05 06:37:08,624 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:37:35] 2025-06-05 06:37:11,100 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 08:37:35] 2025-06-05 06:37:11,100 | INFO     | using path: /scratch/boinc/var/slot104/slots/0/PanDA_Pilot-6677733667/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 08:37:35] 2025-06-05 06:37:11,101 | INFO     | extracted standard info from prmon json
[2025-06-05 08:37:35] 2025-06-05 06:37:11,101 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 08:37:35] 2025-06-05 06:37:11,101 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 08:37:35] 2025-06-05 06:37:11,102 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 08:37:35] 2025-06-05 06:37:11,102 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 08:37:35] 2025-06-05 06:37:11,105 | INFO     | fitting pss+swap vs Time
[2025-06-05 08:37:35] 2025-06-05 06:37:11,105 | INFO     | sum of square deviations: 850825255.0
[2025-06-05 08:37:35] 2025-06-05 06:37:11,106 | INFO     | sum of deviations: 18702648128.999996
[2025-06-05 08:37:35] 2025-06-05 06:37:11,106 | INFO     | mean x: 1749101121.5
[2025-06-05 08:37:35] 2025-06-05 06:37:11,106 | INFO     | mean y: 2295672.0857142857
[2025-06-05 08:37:35] 2025-06-05 06:37:11,106 | INFO     | -- intersect: -38446049185.112686
[2025-06-05 08:37:35] 2025-06-05 06:37:11,106 | INFO     | intersect: -38446049185.112686
[2025-06-05 08:37:35] 2025-06-05 06:37:11,107 | INFO     | chi2: 1.6708993861217816
[2025-06-05 08:37:35] 2025-06-05 06:37:11,107 | INFO     | sum of square deviations: 762879420.0
[2025-06-05 08:37:35] 2025-06-05 06:37:11,108 | INFO     | sum of deviations: 18068672262.000004
[2025-06-05 08:37:35] 2025-06-05 06:37:11,108 | INFO     | mean x: 1749100969.0
[2025-06-05 08:37:35] 2025-06-05 06:37:11,108 | INFO     | mean y: 2294572.3259259257
[2025-06-05 08:37:35] 2025-06-05 06:37:11,108 | INFO     | -- intersect: -41424871154.60851
[2025-06-05 08:37:35] 2025-06-05 06:37:11,108 | INFO     | intersect: -41424871154.60851
[2025-06-05 08:37:35] 2025-06-05 06:37:11,108 | INFO     | chi2: 1.6730818770414377
[2025-06-05 08:37:35] 2025-06-05 06:37:11,108 | INFO     | current chi2=1.6730818770414377 (change=-0.13061773424441833 %)
[2025-06-05 08:37:35] 2025-06-05 06:37:11,108 | INFO     | right removable region: 134
[2025-06-05 08:37:35] 2025-06-05 06:37:11,109 | INFO     | sum of square deviations: 762879420.0
[2025-06-05 08:37:35] 2025-06-05 06:37:11,109 | INFO     | sum of deviations: -3490840473.0000005
[2025-06-05 08:37:35] 2025-06-05 06:37:11,110 | INFO     | mean x: 1749101274.0
[2025-06-05 08:37:35] 2025-06-05 06:37:11,110 | INFO     | mean y: 2333595.1555555556
[2025-06-05 08:37:35] 2025-06-05 06:37:11,110 | INFO     | -- intersect: 8006001486.281867
[2025-06-05 08:37:35] 2025-06-05 06:37:11,110 | INFO     | intersect: 8006001486.281867
[2025-06-05 08:37:35] 2025-06-05 06:37:11,110 | INFO     | chi2: 0.003213333947965144
[2025-06-05 08:37:35] 2025-06-05 06:37:11,110 | INFO     | current chi2=0.003213333947965144 (change=99.80768836384438 %)
[2025-06-05 08:37:35] 2025-06-05 06:37:11,110 | INFO     | sum of square deviations: 681212772.5
[2025-06-05 08:37:35] 2025-06-05 06:37:11,111 | INFO     | sum of deviations: -3416003050.0
[2025-06-05 08:37:35] 2025-06-05 06:37:11,111 | INFO     | mean x: 1749101426.5
[2025-06-05 08:37:35] 2025-06-05 06:37:11,111 | INFO     | mean y: 2333447.6461538463
[2025-06-05 08:37:35] 2025-06-05 06:37:11,111 | INFO     | -- intersect: 8773360722.657137
[2025-06-05 08:37:35] 2025-06-05 06:37:11,111 | INFO     | intersect: 8773360722.657137
[2025-06-05 08:37:35] 2025-06-05 06:37:11,112 | INFO     | chi2: 0.0028915865610240512
[2025-06-05 08:37:35] 2025-06-05 06:37:11,112 | INFO     | current chi2=0.0028915865610240512 (change=10.012883570499746 %)
[2025-06-05 08:37:35] 2025-06-05 06:37:11,112 | INFO     | left removable region: 20
[2025-06-05 08:37:35] 2025-06-05 06:37:11,112 | INFO     | sum of square deviations: 459366752.5
[2025-06-05 08:37:35] 2025-06-05 06:37:11,113 | INFO     | sum of deviations: -1698501629.0
[2025-06-05 08:37:35] 2025-06-05 06:37:11,113 | INFO     | mean x: 1749101548.5
[2025-06-05 08:37:35] 2025-06-05 06:37:11,113 | INFO     | mean y: 2330281.4736842103
[2025-06-05 08:37:35] 2025-06-05 06:37:11,113 | INFO     | -- intersect: 6469606838.267316
[2025-06-05 08:37:35] 2025-06-05 06:37:11,113 | INFO     | intersect: 6469606838.267316
[2025-06-05 08:37:35] 2025-06-05 06:37:11,113 | INFO     | chi2: 0.0014992321964178072
[2025-06-05 08:37:35] 2025-06-05 06:37:11,113 | INFO     | -- intersect: 6469606838.267316
[2025-06-05 08:37:35] 2025-06-05 06:37:11,114 | INFO     | current memory leak: -3.70 B/s (using 114 data points, chi2=0.00)
[2025-06-05 08:37:35] 2025-06-05 06:37:11,114 | INFO     | ..............................
[2025-06-05 08:37:35] 2025-06-05 06:37:11,114 | INFO     | . Timing measurements:
[2025-06-05 08:37:35] 2025-06-05 06:37:11,114 | INFO     | . get job = 0 s
[2025-06-05 08:37:35] 2025-06-05 06:37:11,114 | INFO     | . initial setup = 1 s
[2025-06-05 08:37:35] 2025-06-05 06:37:11,114 | INFO     | . payload setup = 10 s
[2025-06-05 08:37:35] 2025-06-05 06:37:11,114 | INFO     | . stage-in = 0 s
[2025-06-05 08:37:35] 2025-06-05 06:37:11,114 | INFO     | . payload execution = 8539 s
[2025-06-05 08:37:35] 2025-06-05 06:37:11,114 | INFO     | . stage-out = 0 s
[2025-06-05 08:37:35] 2025-06-05 06:37:11,115 | INFO     | . log creation = 0 s
[2025-06-05 08:37:35] 2025-06-05 06:37:11,115 | INFO     | ..............................
[2025-06-05 08:37:35] 2025-06-05 06:37:11,213 | INFO     | 
[2025-06-05 08:37:35] 2025-06-05 06:37:11,214 | INFO     | job summary report
[2025-06-05 08:37:35] 2025-06-05 06:37:11,214 | INFO     | --------------------------------------------------
[2025-06-05 08:37:35] 2025-06-05 06:37:11,214 | INFO     | PanDA job id: 6677733667
[2025-06-05 08:37:35] 2025-06-05 06:37:11,214 | INFO     | task id: 45006595
[2025-06-05 08:37:35] 2025-06-05 06:37:11,214 | INFO     | errors: (none)
[2025-06-05 08:37:35] 2025-06-05 06:37:11,214 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 08:37:35] 2025-06-05 06:37:11,214 | INFO     | pilot state: finished 
[2025-06-05 08:37:35] 2025-06-05 06:37:11,214 | INFO     | transexitcode: 0
[2025-06-05 08:37:35] 2025-06-05 06:37:11,214 | INFO     | exeerrorcode: 0
[2025-06-05 08:37:35] 2025-06-05 06:37:11,214 | INFO     | exeerrordiag: 
[2025-06-05 08:37:35] 2025-06-05 06:37:11,214 | INFO     | exitcode: 0
[2025-06-05 08:37:35] 2025-06-05 06:37:11,215 | INFO     | exitmsg: OK
[2025-06-05 08:37:35] 2025-06-05 06:37:11,215 | INFO     | cpuconsumptiontime: 32344 s
[2025-06-05 08:37:35] 2025-06-05 06:37:11,215 | INFO     | nevents: 400
[2025-06-05 08:37:35] 2025-06-05 06:37:11,215 | INFO     | neventsw: 0
[2025-06-05 08:37:35] 2025-06-05 06:37:11,215 | INFO     | pid: 2675353
[2025-06-05 08:37:35] 2025-06-05 06:37:11,215 | INFO     | pgrp: 2675353
[2025-06-05 08:37:35] 2025-06-05 06:37:11,215 | INFO     | corecount: 4
[2025-06-05 08:37:35] 2025-06-05 06:37:11,215 | INFO     | event service: False
[2025-06-05 08:37:35] 2025-06-05 06:37:11,215 | INFO     | sizes: {0: 2397354, 7: 2397560, 11: 2397588, 8553: 2425744, 8554: 2425743, 8555: 2434764, 8557: 2434948, 8566: 2435118}
[2025-06-05 08:37:35] 2025-06-05 06:37:11,215 | INFO     | --------------------------------------------------
[2025-06-05 08:37:35] 2025-06-05 06:37:11,215 | INFO     | 
[2025-06-05 08:37:35] 2025-06-05 06:37:11,216 | INFO     | executing command: ls -lF /scratch/boinc/var/slot104/slots/0
[2025-06-05 08:37:35] 2025-06-05 06:37:11,249 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 08:37:35] 2025-06-05 06:37:11,250 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 08:37:35] 2025-06-05 06:37:11,250 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 08:37:35] 2025-06-05 06:37:11,250 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 08:37:35] 2025-06-05 06:37:11,250 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 08:37:35] 2025-06-05 06:37:11,250 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 08:37:35] 2025-06-05 06:37:11,250 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 08:37:35] 2025-06-05 06:37:11,250 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 08:37:35] 2025-06-05 06:37:11,250 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 08:37:35] 2025-06-05 06:37:11,250 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 08:37:35] 2025-06-05 06:37:11,250 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 08:37:35] 2025-06-05 06:37:11,250 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 08:37:35] 2025-06-05 06:37:11,250 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 08:37:35] 2025-06-05 06:37:11,251 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 08:37:35] 2025-06-05 06:37:11,251 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 08:37:35] 2025-06-05 06:37:11,251 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 08:37:35] 2025-06-05 06:37:11,251 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 08:37:35] 2025-06-05 06:37:11,251 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 08:37:35] 2025-06-05 06:37:11,251 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 08:37:35] 2025-06-05 06:37:11,251 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 08:37:35] 2025-06-05 06:37:11,251 | INFO     | job 6677733667 has completed (purged errors)
[2025-06-05 08:37:35] 2025-06-05 06:37:11,251 | INFO     | overall cleanup function is called
[2025-06-05 08:37:35] 2025-06-05 06:37:12,256 | INFO     | --- collectZombieJob: --- 10, [2675353]
[2025-06-05 08:37:35] 2025-06-05 06:37:12,256 | INFO     | zombie collector waiting for pid 2675353
[2025-06-05 08:37:35] 2025-06-05 06:37:12,256 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 08:37:35] 2025-06-05 06:37:12,257 | INFO     | collected zombie processes
[2025-06-05 08:37:35] 2025-06-05 06:37:12,257 | INFO     | will attempt to kill all subprocesses of pid=2675353
[2025-06-05 08:37:35] 2025-06-05 06:37:12,939 | INFO     | process IDs to be killed: [2675353] (in reverse order)
[2025-06-05 08:37:35] 2025-06-05 06:37:13,301 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 08:37:35] 2025-06-05 06:37:13,302 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 08:37:35] 2025-06-05 06:37:13,330 | INFO     | did not find any defunct processes belonging to 2675353
[2025-06-05 08:37:35] 2025-06-05 06:37:13,357 | INFO     | did not find any defunct processes belonging to 2675353
[2025-06-05 08:37:35] 2025-06-05 06:37:13,358 | INFO     | ready for new job
[2025-06-05 08:37:35] 2025-06-05 06:37:13,358 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 08:37:35] 2025-06-05 06:37:13,360 | INFO     | **************************************
[2025-06-05 08:37:35] 2025-06-05 06:37:13,360 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 08:37:35] 2025-06-05 06:37:13,360 | INFO     | **************************************
[2025-06-05 08:37:35] 2025-06-05 06:37:13,361 | INFO     | 
[2025-06-05 08:37:35] 2025-06-05 06:37:13,369 | INFO     | architecture information:
[2025-06-05 08:37:35] 2025-06-05 06:37:13,370 | INFO     | executing command: cat /etc/os-release
[2025-06-05 08:37:35] 2025-06-05 06:37:13,395 | INFO     | cat /etc/os-release:
[2025-06-05 08:37:35] NAME="CentOS Linux"
[2025-06-05 08:37:35] VERSION="7 (Core)"
[2025-06-05 08:37:35] ID="centos"
[2025-06-05 08:37:35] ID_LIKE="rhel fedora"
[2025-06-05 08:37:35] VERSION_ID="7"
[2025-06-05 08:37:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 08:37:35] ANSI_COLOR="0;31"
[2025-06-05 08:37:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 08:37:35] HOME_URL="https://www.centos.org/"
[2025-06-05 08:37:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 08:37:35] 
[2025-06-05 08:37:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 08:37:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 08:37:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 08:37:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 08:37:35] 
[2025-06-05 08:37:35] 2025-06-05 06:37:13,395 | INFO     | **************************************
[2025-06-05 08:37:35] 2025-06-05 06:37:13,898 | INFO     | executing command: df -mP /scratch/boinc/var/slot104/slots/0
[2025-06-05 08:37:35] 2025-06-05 06:37:13,926 | INFO     | sufficient remaining disk space (3281704189952 B)
[2025-06-05 08:37:35] 2025-06-05 06:37:13,926 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 08:37:35] 2025-06-05 06:37:13,926 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 08:37:35] 2025-06-05 06:37:13,926 | INFO     | update_server=False
[2025-06-05 08:37:35] 2025-06-05 06:37:13,926 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 08:37:35] 2025-06-05 06:37:14,062 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 08:37:35] 2025-06-05 06:37:14,063 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 08:37:35] 2025-06-05 06:37:14,063 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 08:37:35] 2025-06-05 06:37:14,182 | INFO     | all payload control threads have been joined
[2025-06-05 08:37:35] 2025-06-05 06:37:14,638 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:37:35] 2025-06-05 06:37:14,638 | INFO     | aborting loop
[2025-06-05 08:37:35] 2025-06-05 06:37:14,778 | INFO     | all data control threads have been joined
[2025-06-05 08:37:35] 2025-06-05 06:37:14,932 | INFO     | [job] retrieve thread has finished
[2025-06-05 08:37:35] 2025-06-05 06:37:15,043 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 08:37:35] 2025-06-05 06:37:15,045 | INFO     | [payload] failed_post thread has finished
[2025-06-05 08:37:35] 2025-06-05 06:37:15,188 | INFO     | [payload] control thread has finished
[2025-06-05 08:37:35] 2025-06-05 06:37:15,193 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 08:37:35] 2025-06-05 06:37:15,273 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 08:37:35] 2025-06-05 06:37:15,390 | INFO     | all job control threads have been joined
[2025-06-05 08:37:35] 2025-06-05 06:37:15,643 | INFO     | [job] job monitor thread has finished
[2025-06-05 08:37:35] 2025-06-05 06:37:15,777 | INFO     | [payload] validate_post thread has finished
[2025-06-05 08:37:35] 2025-06-05 06:37:15,783 | INFO     | [data] control thread has finished
[2025-06-05 08:37:35] 2025-06-05 06:37:15,796 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 08:37:35] 2025-06-05 06:37:15,903 | INFO     | [data] copytool_in thread has finished
[2025-06-05 08:37:35] 2025-06-05 06:37:15,938 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 08:37:35] 2025-06-05 06:37:16,169 | INFO     | [job] validate thread has finished
[2025-06-05 08:37:35] 2025-06-05 06:37:16,224 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:37:35] 2025-06-05 06:37:16,395 | INFO     | [job] control thread has finished
[2025-06-05 08:37:35] 2025-06-05 06:37:16,862 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 08:37:35] 2025-06-05 06:37:17,198 | INFO     | [data] copytool_out thread has finished
[2025-06-05 08:37:35] 2025-06-05 06:37:17,229 | INFO     | [job] queue monitor thread has finished
[2025-06-05 08:37:35] 2025-06-05 06:37:20,864 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 08:37:35] 2025-06-05 06:37:22,326 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23219729102656)>', '<ExcThread(monitor, started 23219490748160)>']
[2025-06-05 08:37:35] 2025-06-05 06:37:23,107 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 08:37:35] 2025-06-05 06:37:23,107 | INFO     | [monitor] control thread has ended
[2025-06-05 08:37:35] 2025-06-05 06:37:27,351 | INFO     | all workflow threads have been joined
[2025-06-05 08:37:35] 2025-06-05 06:37:27,351 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 08:37:35] 2025-06-05 06:37:27,351 | INFO     | traces error code: 0
[2025-06-05 08:37:35] 2025-06-05 06:37:27,351 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 08:37:35] 2025-06-05 06:37:27,489 [wrapper] ==== pilot stdout END ====
[2025-06-05 08:37:35] 2025-06-05 06:37:27,494 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 08:37:35] 2025-06-05 06:37:27,498 [wrapper] pilotpid: 2665402
[2025-06-05 08:37:35] 2025-06-05 06:37:27,502 [wrapper] Pilot exit status: 0
[2025-06-05 08:37:35] 2025-06-05 06:37:27,518 [wrapper] pandaids: 6677733667
[2025-06-05 08:37:35] 2025-06-05 06:37:27,686 [wrapper] cleanup supervisor_pilot 3144011 2665403
[2025-06-05 08:37:35] 2025-06-05 06:37:27,691 [wrapper] Test setup, not cleaning
[2025-06-05 08:37:35] 2025-06-05 06:37:27,696 [wrapper] apfmon messages muted
[2025-06-05 08:37:35] 2025-06-05 06:37:27,701 [wrapper] ==== wrapper stdout END ====
[2025-06-05 08:37:35] 2025-06-05 06:37:27,704 [wrapper] ==== wrapper stderr END ====
[2025-06-05 08:37:35]  *** Error codes and diagnostics ***
[2025-06-05 08:37:35]     "exeErrorCode": 0,
[2025-06-05 08:37:35]     "exeErrorDiag": "",
[2025-06-05 08:37:35]     "pilotErrorCode": 0,
[2025-06-05 08:37:35]     "pilotErrorDiag": "",
[2025-06-05 08:37:35]  *** Listing of results directory ***
[2025-06-05 08:37:35] total 390460
[2025-06-05 08:37:35] -rw-r--r-- 1 boinc boinc    495897 Jun  3 17:35 pilot3.tar.gz
[2025-06-05 08:37:35] -rw-r--r-- 1 boinc boinc      5111 Jun  3 17:49 queuedata.json
[2025-06-05 08:37:35] -rwx------ 1 boinc boinc     37140 Jun  3 17:49 runpilot2-wrapper.sh
[2025-06-05 08:37:35] -rw-r--r-- 1 boinc boinc       100 Jun  5 06:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 08:37:35] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 06:13 run_atlas
[2025-06-05 08:37:35] -rw-r--r-- 1 boinc boinc       105 Jun  5 06:13 job.xml
[2025-06-05 08:37:35] -rw-r--r-- 1 boinc boinc      6686 Jun  5 06:13 init_data.xml
[2025-06-05 08:37:35] -rw-r--r-- 2 boinc boinc 214016278 Jun  5 06:13 EVNT.45006593._001511.pool.root.1
[2025-06-05 08:37:35] -rw-r--r-- 2 boinc boinc     15093 Jun  5 06:13 start_atlas.sh
[2025-06-05 08:37:35] drwxrwx--x 2 boinc boinc      4096 Jun  5 06:13 shared
[2025-06-05 08:37:35] -rw-r--r-- 2 boinc boinc    508880 Jun  5 06:13 input.tar.gz
[2025-06-05 08:37:35] -rw-r--r-- 1 boinc boinc         0 Jun  5 06:13 boinc_lockfile
[2025-06-05 08:37:35] -rw-r--r-- 1 boinc boinc      2525 Jun  5 06:13 pandaJob.out
[2025-06-05 08:37:35] -rw------- 1 boinc boinc    987109 Jun  5 06:14 agis_schedconf.cvmfs.json
[2025-06-05 08:37:35] -rw------- 1 boinc boinc   1598969 Jun  5 06:14 agis_ddmendpoints.agis.ALL.json
[2025-06-05 08:37:35] drwx------ 4 boinc boinc      4096 Jun  5 06:14 pilot3
[2025-06-05 08:37:35] -rw------- 1 boinc boinc 179789166 Jun  5 08:36 HITS.45006595._037655.pool.root.1
[2025-06-05 08:37:35] -rw-r--r-- 1 boinc boinc       528 Jun  5 08:36 boinc_task_state.xml
[2025-06-05 08:37:35] -rw------- 1 boinc boinc      1028 Jun  5 08:36 memory_monitor_summary.json
[2025-06-05 08:37:35] -rw------- 1 boinc boinc        95 Jun  5 08:36 pilot_heartbeat.json
[2025-06-05 08:37:35] -rw------- 1 boinc boinc    291823 Jun  5 08:36 log.45006595._037655.job.log.tgz.1
[2025-06-05 08:37:35] -rw------- 1 boinc boinc      7697 Jun  5 08:37 heartbeat.json
[2025-06-05 08:37:35] -rw------- 1 boinc boinc      4365 Jun  5 08:37 pilotlog.txt
[2025-06-05 08:37:35] -rw------- 1 boinc boinc    802670 Jun  5 08:37 log.45006595._037655.job.log.1
[2025-06-05 08:37:35] -rw------- 1 boinc boinc       357 Jun  5 08:37 output.list
[2025-06-05 08:37:35] -rw-r--r-- 1 boinc boinc       620 Jun  5 08:37 runtime_log
[2025-06-05 08:37:35] -rw------- 1 boinc boinc   1116160 Jun  5 08:37 result.tar.gz
[2025-06-05 08:37:35] -rw-r--r-- 1 boinc boinc      9040 Jun  5 08:37 runtime_log.err
[2025-06-05 08:37:35] -rw------- 1 boinc boinc       663 Jun  5 08:37 ZeCNDmX4ig7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTvkKDmlHtZYm.diag
[2025-06-05 08:37:35] -rw-r--r-- 1 boinc boinc        26 Jun  5 08:37 wrapper_checkpoint.txt
[2025-06-05 08:37:35] -rw-r--r-- 1 boinc boinc      8192 Jun  5 08:37 boinc_mmap_file
[2025-06-05 08:37:35] -rw-r--r-- 1 boinc boinc     21072 Jun  5 08:37 stderr.txt
[2025-06-05 08:37:35] HITS file was successfully produced:
[2025-06-05 08:37:35] -rw------- 1 boinc boinc 179789166 Jun  5 08:36 shared/HITS.pool.root.1
[2025-06-05 08:37:35]  *** Contents of shared directory: ***
[2025-06-05 08:37:35] total 386196
[2025-06-05 08:37:35] -rw-r--r-- 2 boinc boinc 214016278 Jun  5 06:13 ATLAS.root_0
[2025-06-05 08:37:35] -rw-r--r-- 2 boinc boinc     15093 Jun  5 06:13 start_atlas.sh
[2025-06-05 08:37:35] -rw-r--r-- 2 boinc boinc    508880 Jun  5 06:13 input.tar.gz
[2025-06-05 08:37:35] -rw------- 1 boinc boinc 179789166 Jun  5 08:36 HITS.pool.root.1
[2025-06-05 08:37:35] -rw------- 1 boinc boinc   1116160 Jun  5 08:37 result.tar.gz
08:37:36 (2661377): run_atlas exited; CPU time 32849.982538
08:37:36 (2661377): called boinc_finish(0)

</stderr_txt>
]]>

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