Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:51:15 (25299): wrapper (7.7.26015): starting
02:51:15 (25299): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 02:51:15] Arguments: --nthreads 8
[2025-06-04 02:51:15] Threads: 8
[2025-06-04 02:51:15] Checking for CVMFS
[2025-06-04 02:51:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 02:51:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 02:51:16] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 02:51:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 02:51:18] 2.11.2.0 32728 32499 92976 146762 3 254 23710632 25165825 4243 130560 0 16729077 99.799 18855429 2234 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 02:51:18] CVMFS is ok
[2025-06-04 02:51:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 02:51:18] Checking for apptainer binary...
[2025-06-04 02:51:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 02:51:18] Running /usr/bin/apptainer --version
[2025-06-04 02:51:18] apptainer version 1.3.2-1.el7
[2025-06-04 02:51:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 02:52:55] cg-vwn337.simple-grid.lan
[2025-06-04 02:52:55] apptainer works
[2025-06-04 02:52:55] Set ATHENA_PROC_NUMBER=8
[2025-06-04 02:52:55] Set ATHENA_CORE_NUMBER=8
[2025-06-04 02:52:55] Starting ATLAS job with PandaID=6677676721
[2025-06-04 02:52:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 06:51:40]  *** The last 200 lines of the pilot log: ***
[2025-06-04 06:51:40] 2025-06-04 04:48:12,387 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6677676721/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 06:51:40] 2025-06-04 04:48:12,388 | INFO     | extracted standard info from prmon json
[2025-06-04 06:51:40] 2025-06-04 04:48:12,388 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 06:51:40] 2025-06-04 04:48:12,389 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 06:51:40] 2025-06-04 04:48:12,389 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 06:51:40] 2025-06-04 04:48:12,389 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 06:51:40] 2025-06-04 04:48:12,395 | INFO     | fitting pss+swap vs Time
[2025-06-04 06:51:40] 2025-06-04 04:48:12,395 | INFO     | sum of square deviations: 3256879670.0
[2025-06-04 06:51:40] 2025-06-04 04:48:12,397 | INFO     | sum of deviations: 27519714216.000015
[2025-06-04 06:51:40] 2025-06-04 04:48:12,397 | INFO     | mean x: 1749005710.0
[2025-06-04 06:51:40] 2025-06-04 04:48:12,397 | INFO     | mean y: 2466156.1552511416
[2025-06-04 06:51:40] 2025-06-04 04:48:12,405 | INFO     | -- intersect: -14776138575.456524
[2025-06-04 06:51:40] 2025-06-04 04:48:12,405 | INFO     | intersect: -14776138575.456524
[2025-06-04 06:51:40] 2025-06-04 04:48:12,405 | INFO     | chi2: 5.439283486798307
[2025-06-04 06:51:40] 2025-06-04 04:48:12,406 | INFO     | sum of square deviations: 3038856977.5
[2025-06-04 06:51:40] 2025-06-04 04:48:12,408 | INFO     | sum of deviations: 41415146843.50002
[2025-06-04 06:51:40] 2025-06-04 04:48:12,408 | INFO     | mean x: 1749005557.5
[2025-06-04 06:51:40] 2025-06-04 04:48:12,408 | INFO     | mean y: 2475688.5654205605
[2025-06-04 06:51:40] 2025-06-04 04:48:12,408 | INFO     | -- intersect: -23833895200.317627
[2025-06-04 06:51:40] 2025-06-04 04:48:12,408 | INFO     | intersect: -23833895200.317627
[2025-06-04 06:51:40] 2025-06-04 04:48:12,408 | INFO     | chi2: 4.715640824630385
[2025-06-04 06:51:40] 2025-06-04 04:48:12,409 | INFO     | current chi2=4.715640824630385 (change=13.304007116457091 %)
[2025-06-04 06:51:40] 2025-06-04 04:48:12,409 | INFO     | right removable region: 213
[2025-06-04 06:51:40] 2025-06-04 04:48:12,409 | INFO     | sum of square deviations: 3038856977.5
[2025-06-04 06:51:40] 2025-06-04 04:48:12,411 | INFO     | sum of deviations: -42707207821.00001
[2025-06-04 06:51:40] 2025-06-04 04:48:12,411 | INFO     | mean x: 1749005862.5
[2025-06-04 06:51:40] 2025-06-04 04:48:12,411 | INFO     | mean y: 2515183.355140187
[2025-06-04 06:51:40] 2025-06-04 04:48:12,411 | INFO     | -- intersect: 24582532407.918606
[2025-06-04 06:51:40] 2025-06-04 04:48:12,411 | INFO     | intersect: 24582532407.918606
[2025-06-04 06:51:40] 2025-06-04 04:48:12,411 | INFO     | chi2: 1.3750978421158608
[2025-06-04 06:51:40] 2025-06-04 04:48:12,411 | INFO     | current chi2=1.3750978421158608 (change=74.71913634482624 %)
[2025-06-04 06:51:40] 2025-06-04 04:48:12,412 | INFO     | sum of square deviations: 2830787960.0
[2025-06-04 06:51:40] 2025-06-04 04:48:12,413 | INFO     | sum of deviations: -58840125359.0
[2025-06-04 06:51:40] 2025-06-04 04:48:12,413 | INFO     | mean x: 1749006015.0
[2025-06-04 06:51:40] 2025-06-04 04:48:12,414 | INFO     | mean y: 2526889.4210526315
[2025-06-04 06:51:40] 2025-06-04 04:48:12,414 | INFO     | -- intersect: 36356974707.633835
[2025-06-04 06:51:40] 2025-06-04 04:48:12,414 | INFO     | intersect: 36356974707.633835
[2025-06-04 06:51:40] 2025-06-04 04:48:12,414 | INFO     | chi2: 0.9891779428487595
[2025-06-04 06:51:40] 2025-06-04 04:48:12,414 | INFO     | current chi2=0.9891779428487595 (change=28.06490472512756 %)
[2025-06-04 06:51:40] 2025-06-04 04:48:12,415 | INFO     | sum of square deviations: 2632440055.0
[2025-06-04 06:51:40] 2025-06-04 04:48:12,416 | INFO     | sum of deviations: -55091718912.999985
[2025-06-04 06:51:40] 2025-06-04 04:48:12,416 | INFO     | mean x: 1749006167.5
[2025-06-04 06:51:40] 2025-06-04 04:48:12,416 | INFO     | mean y: 2523977.4509803923
[2025-06-04 06:51:40] 2025-06-04 04:48:12,417 | INFO     | -- intersect: 36605733981.79555
[2025-06-04 06:51:40] 2025-06-04 04:48:12,417 | INFO     | intersect: 36605733981.79555
[2025-06-04 06:51:40] 2025-06-04 04:48:12,417 | INFO     | chi2: 0.9800424778630509
[2025-06-04 06:51:40] 2025-06-04 04:48:12,417 | INFO     | current chi2=0.9800424778630509 (change=0.9235411132803005 %)
[2025-06-04 06:51:40] 2025-06-04 04:48:12,425 | INFO     | left removable region: 30
[2025-06-04 06:51:40] 2025-06-04 04:48:12,426 | INFO     | sum of square deviations: 1900284932.0
[2025-06-04 06:51:40] 2025-06-04 04:48:12,427 | INFO     | sum of deviations: -20928493111.000008
[2025-06-04 06:51:40] 2025-06-04 04:48:12,428 | INFO     | mean x: 1749006442.0
[2025-06-04 06:51:40] 2025-06-04 04:48:12,428 | INFO     | mean y: 2518441.295081967
[2025-06-04 06:51:40] 2025-06-04 04:48:12,428 | INFO     | -- intersect: 19264929386.145763
[2025-06-04 06:51:40] 2025-06-04 04:48:12,428 | INFO     | intersect: 19264929386.145763
[2025-06-04 06:51:40] 2025-06-04 04:48:12,428 | INFO     | chi2: 0.14537793465957644
[2025-06-04 06:51:40] 2025-06-04 04:48:12,428 | INFO     | -- intersect: 19264929386.145763
[2025-06-04 06:51:40] 2025-06-04 04:48:12,428 | INFO     | current memory leak: -11.01 B/s (using 183 data points, chi2=0.15)
[2025-06-04 06:51:40] 2025-06-04 04:48:12,429 | INFO     | ..............................
[2025-06-04 06:51:40] 2025-06-04 04:48:12,429 | INFO     | . Timing measurements:
[2025-06-04 06:51:40] 2025-06-04 04:48:12,429 | INFO     | . get job = 0 s
[2025-06-04 06:51:40] 2025-06-04 04:48:12,430 | INFO     | . initial setup = 5 s
[2025-06-04 06:51:40] 2025-06-04 04:48:12,430 | INFO     | . payload setup = 156 s
[2025-06-04 06:51:40] 2025-06-04 04:48:12,430 | INFO     | . stage-in = 0 s
[2025-06-04 06:51:40] 2025-06-04 04:48:12,430 | INFO     | . payload execution = 13485 s
[2025-06-04 06:51:40] 2025-06-04 04:48:12,430 | INFO     | . stage-out = 3 s
[2025-06-04 06:51:40] 2025-06-04 04:48:12,430 | INFO     | . log creation = 1 s
[2025-06-04 06:51:40] 2025-06-04 04:48:12,430 | INFO     | ..............................
[2025-06-04 06:51:40] 2025-06-04 04:48:13,011 | INFO     | 
[2025-06-04 06:51:40] 2025-06-04 04:48:13,011 | INFO     | job summary report
[2025-06-04 06:51:40] 2025-06-04 04:48:13,011 | INFO     | --------------------------------------------------
[2025-06-04 06:51:40] 2025-06-04 04:48:13,011 | INFO     | PanDA job id: 6677676721
[2025-06-04 06:51:40] 2025-06-04 04:48:13,011 | INFO     | task id: 45006595
[2025-06-04 06:51:40] 2025-06-04 04:48:13,011 | INFO     | errors: (none)
[2025-06-04 06:51:40] 2025-06-04 04:48:13,011 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 06:51:40] 2025-06-04 04:48:13,011 | INFO     | pilot state: finished 
[2025-06-04 06:51:40] 2025-06-04 04:48:13,012 | INFO     | transexitcode: 0
[2025-06-04 06:51:40] 2025-06-04 04:48:13,012 | INFO     | exeerrorcode: 0
[2025-06-04 06:51:40] 2025-06-04 04:48:13,012 | INFO     | exeerrordiag: 
[2025-06-04 06:51:40] 2025-06-04 04:48:13,012 | INFO     | exitcode: 0
[2025-06-04 06:51:40] 2025-06-04 04:48:13,012 | INFO     | exitmsg: OK
[2025-06-04 06:51:40] 2025-06-04 04:48:13,012 | INFO     | cpuconsumptiontime: 49339 s
[2025-06-04 06:51:40] 2025-06-04 04:48:13,012 | INFO     | nevents: 400
[2025-06-04 06:51:40] 2025-06-04 04:48:13,012 | INFO     | neventsw: 0
[2025-06-04 06:51:40] 2025-06-04 04:48:13,012 | INFO     | pid: 5301
[2025-06-04 06:51:40] 2025-06-04 04:48:13,012 | INFO     | pgrp: 5301
[2025-06-04 06:51:40] 2025-06-04 04:48:13,012 | INFO     | corecount: 8
[2025-06-04 06:51:40] 2025-06-04 04:48:13,013 | INFO     | event service: False
[2025-06-04 06:51:40] 2025-06-04 04:48:13,013 | INFO     | sizes: {0: 2404957, 1: 2405212, 2: 2405240, 13: 2405240, 23: 2405296, 34: 2405324, 45: 2405480, 56: 2405508, 66: 2405536, 77: 2405564, 88: 2406134, 99: 2406134, 13
[2025-06-04 06:51:40] 2025-06-04 04:48:13,013 | INFO     | --------------------------------------------------
[2025-06-04 06:51:40] 2025-06-04 04:48:13,013 | INFO     | 
[2025-06-04 06:51:40] 2025-06-04 04:48:13,013 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-04 06:51:40] 2025-06-04 04:48:13,606 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 06:51:40] 2025-06-04 04:48:13,606 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 06:51:40] 2025-06-04 04:48:13,606 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 06:51:40] 2025-06-04 04:48:13,606 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 06:51:40] 2025-06-04 04:48:13,606 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 06:51:40] 2025-06-04 04:48:13,606 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 06:51:40] 2025-06-04 04:48:13,607 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 06:51:40] 2025-06-04 04:48:13,607 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 06:51:40] 2025-06-04 04:48:13,607 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 06:51:40] 2025-06-04 04:48:13,607 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 06:51:40] 2025-06-04 04:48:13,607 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 06:51:40] 2025-06-04 04:48:13,607 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 06:51:40] 2025-06-04 04:48:13,607 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 06:51:40] 2025-06-04 04:48:13,607 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 06:51:40] 2025-06-04 04:48:13,607 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 06:51:40] 2025-06-04 04:48:13,607 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 06:51:40] 2025-06-04 04:48:13,608 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 06:51:40] 2025-06-04 04:48:13,608 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 06:51:40] 2025-06-04 04:48:13,608 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 06:51:40] 2025-06-04 04:48:13,608 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 06:51:40] 2025-06-04 04:48:13,608 | INFO     | job 6677676721 has completed (purged errors)
[2025-06-04 06:51:40] 2025-06-04 04:48:13,608 | INFO     | overall cleanup function is called
[2025-06-04 06:51:40] 2025-06-04 04:48:14,619 | INFO     | --- collectZombieJob: --- 10, [5301]
[2025-06-04 06:51:40] 2025-06-04 04:48:14,619 | INFO     | zombie collector waiting for pid 5301
[2025-06-04 06:51:40] 2025-06-04 04:48:14,619 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 06:51:40] 2025-06-04 04:48:14,619 | INFO     | collected zombie processes
[2025-06-04 06:51:40] 2025-06-04 04:48:14,619 | INFO     | will attempt to kill all subprocesses of pid=5301
[2025-06-04 06:51:40] 2025-06-04 04:48:14,798 | INFO     | process IDs to be killed: [5301] (in reverse order)
[2025-06-04 06:51:40] 2025-06-04 04:48:15,332 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 06:51:40] 2025-06-04 04:48:15,333 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 06:51:40] 2025-06-04 04:48:15,336 | INFO     | did not find any defunct processes belonging to 5301
[2025-06-04 06:51:40] 2025-06-04 04:48:15,340 | INFO     | did not find any defunct processes belonging to 5301
[2025-06-04 06:51:40] 2025-06-04 04:48:15,340 | INFO     | ready for new job
[2025-06-04 06:51:40] 2025-06-04 04:48:15,340 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 06:51:40] 2025-06-04 04:48:15,343 | INFO     | **************************************
[2025-06-04 06:51:40] 2025-06-04 04:48:15,343 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 06:51:40] 2025-06-04 04:48:15,343 | INFO     | **************************************
[2025-06-04 06:51:40] 2025-06-04 04:48:15,343 | INFO     | 
[2025-06-04 06:51:40] 2025-06-04 04:48:15,344 | INFO     | pilot is running in a VM
[2025-06-04 06:51:40] 2025-06-04 04:48:15,344 | INFO     | architecture information:
[2025-06-04 06:51:40] 2025-06-04 04:48:15,345 | INFO     | executing command: cat /etc/os-release
[2025-06-04 06:51:40] 2025-06-04 04:48:15,516 | INFO     | cat /etc/os-release:
[2025-06-04 06:51:40] NAME="CentOS Linux"
[2025-06-04 06:51:40] VERSION="7 (Core)"
[2025-06-04 06:51:40] ID="centos"
[2025-06-04 06:51:40] ID_LIKE="rhel fedora"
[2025-06-04 06:51:40] VERSION_ID="7"
[2025-06-04 06:51:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 06:51:40] ANSI_COLOR="0;31"
[2025-06-04 06:51:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 06:51:40] HOME_URL="https://www.centos.org/"
[2025-06-04 06:51:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 06:51:40] 
[2025-06-04 06:51:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 06:51:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 06:51:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 06:51:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 06:51:40] 
[2025-06-04 06:51:40] 2025-06-04 04:48:15,517 | INFO     | **************************************
[2025-06-04 06:51:40] 2025-06-04 04:48:16,021 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-04 06:51:40] 2025-06-04 04:48:16,172 | INFO     | sufficient remaining disk space (496596156416 B)
[2025-06-04 06:51:40] 2025-06-04 04:48:16,172 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 06:51:40] 2025-06-04 04:48:16,172 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 06:51:40] 2025-06-04 04:48:16,172 | INFO     | update_server=False
[2025-06-04 06:51:40] 2025-06-04 04:48:16,172 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 06:51:40] 2025-06-04 04:48:16,173 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 06:51:40] 2025-06-04 04:48:16,324 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 06:51:40] 2025-06-04 04:48:16,324 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 06:51:40] 2025-06-04 04:48:16,324 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 06:51:40] 2025-06-04 04:48:16,452 | INFO     | all data control threads have been joined
[2025-06-04 06:51:40] 2025-06-04 04:48:16,564 | INFO     | all payload control threads have been joined
[2025-06-04 06:51:40] 2025-06-04 04:48:16,675 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:51:40] 2025-06-04 04:48:16,675 | INFO     | aborting loop
[2025-06-04 06:51:40] 2025-06-04 04:48:17,171 | INFO     | all job control threads have been joined
[2025-06-04 06:51:40] 2025-06-04 04:48:17,179 | INFO     | [job] retrieve thread has finished
[2025-06-04 06:51:40] 2025-06-04 04:48:17,203 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 06:51:40] 2025-06-04 04:48:17,270 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 06:51:40] 2025-06-04 04:48:17,443 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 06:51:40] 2025-06-04 04:48:17,458 | INFO     | [data] control thread has finished
[2025-06-04 06:51:40] 2025-06-04 04:48:17,570 | INFO     | [payload] control thread has finished
[2025-06-04 06:51:40] 2025-06-04 04:48:17,614 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:51:40] 2025-06-04 04:48:17,681 | INFO     | [job] job monitor thread has finished
[2025-06-04 06:51:40] 2025-06-04 04:48:17,888 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 06:51:40] 2025-06-04 04:48:18,178 | INFO     | [job] control thread has finished
[2025-06-04 06:51:40] 2025-06-04 04:48:18,179 | INFO     | [data] copytool_out thread has finished
[2025-06-04 06:51:40] 2025-06-04 04:48:18,199 | INFO     | [job] validate thread has finished
[2025-06-04 06:51:40] 2025-06-04 04:48:18,290 | INFO     | [payload] validate_post thread has finished
[2025-06-04 06:51:40] 2025-06-04 04:48:18,347 | INFO     | [payload] failed_post thread has finished
[2025-06-04 06:51:40] 2025-06-04 04:48:18,432 | INFO     | [data] copytool_in thread has finished
[2025-06-04 06:51:40] 2025-06-04 04:48:18,566 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 06:51:40] 2025-06-04 04:48:18,621 | INFO     | [job] queue monitor thread has finished
[2025-06-04 06:51:40] 2025-06-04 04:48:21,279 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 06:51:40] 2025-06-04 04:48:22,603 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140415761610560)>', '<ExcThread(monitor, started 140415021868800)>']
[2025-06-04 06:51:40] 2025-06-04 04:48:23,366 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 06:51:40] 2025-06-04 04:48:23,367 | INFO     | [monitor] control thread has ended
[2025-06-04 06:51:40] 2025-06-04 04:48:27,628 | INFO     | all workflow threads have been joined
[2025-06-04 06:51:40] 2025-06-04 04:48:27,629 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 06:51:40] 2025-06-04 04:48:27,629 | INFO     | traces error code: 0
[2025-06-04 06:51:40] 2025-06-04 04:48:27,629 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 06:51:40] 2025-06-04 04:48:27,943 [wrapper] ==== pilot stdout END ====
[2025-06-04 06:51:40] 2025-06-04 04:48:28,024 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 06:51:40] 2025-06-04 04:48:28,103 [wrapper] pilotpid: 31036
[2025-06-04 06:51:40] 2025-06-04 04:48:28,193 [wrapper] Pilot exit status: 0
[2025-06-04 06:51:40] 2025-06-04 04:48:28,615 [wrapper] pandaids: 6677676721
[2025-06-04 06:51:40] 2025-06-04 04:48:28,787 [wrapper] cleanup supervisor_pilot 28830 31037
[2025-06-04 06:51:40] 2025-06-04 04:48:28,855 [wrapper] Test setup, not cleaning
[2025-06-04 06:51:40] 2025-06-04 04:48:28,919 [wrapper] apfmon messages muted
[2025-06-04 06:51:40] 2025-06-04 04:48:29,030 [wrapper] ==== wrapper stdout END ====
[2025-06-04 06:51:40] 2025-06-04 04:48:29,151 [wrapper] ==== wrapper stderr END ====
[2025-06-04 06:51:40]  *** Error codes and diagnostics ***
[2025-06-04 06:51:40]     "exeErrorCode": 0,
[2025-06-04 06:51:40]     "exeErrorDiag": "",
[2025-06-04 06:51:40]     "pilotErrorCode": 0,
[2025-06-04 06:51:40]     "pilotErrorDiag": "",
[2025-06-04 06:51:40]  *** Listing of results directory ***
[2025-06-04 06:51:40] total 391008
[2025-06-04 06:51:40] -rw-r--r--. 1 boinc boinc    495897 Jun  3 17:19 pilot3.tar.gz
[2025-06-04 06:51:40] -rwx------. 1 boinc boinc     37140 Jun  3 17:25 runpilot2-wrapper.sh
[2025-06-04 06:51:40] -rw-r--r--. 1 boinc boinc      5111 Jun  3 17:25 queuedata.json
[2025-06-04 06:51:40] -rw-r--r--. 1 boinc boinc       100 Jun  4 02:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 06:51:40] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 02:51 run_atlas
[2025-06-04 06:51:40] -rw-r--r--. 1 boinc boinc       105 Jun  4 02:51 job.xml
[2025-06-04 06:51:40] -rw-r--r--. 2 boinc boinc 213590278 Jun  4 02:51 EVNT.45006593._001479.pool.root.1
[2025-06-04 06:51:40] -rw-r--r--. 2 boinc boinc     15093 Jun  4 02:51 start_atlas.sh
[2025-06-04 06:51:40] drwxrwx--x. 2 boinc boinc        68 Jun  4 02:51 shared
[2025-06-04 06:51:40] -rw-r--r--. 2 boinc boinc    508875 Jun  4 02:51 input.tar.gz
[2025-06-04 06:51:40] -rw-r--r--. 1 boinc boinc      6391 Jun  4 02:51 init_data.xml
[2025-06-04 06:51:40] -rw-r--r--. 1 boinc boinc         0 Jun  4 02:51 boinc_lockfile
[2025-06-04 06:51:40] -rw-r--r--. 1 boinc boinc      2525 Jun  4 02:52 pandaJob.out
[2025-06-04 06:51:40] -rw-------. 1 boinc boinc    986069 Jun  4 02:56 agis_schedconf.cvmfs.json
[2025-06-04 06:51:40] drwx------. 4 boinc boinc      4096 Jun  4 02:56 pilot3
[2025-06-04 06:51:40] -rw-------. 1 boinc boinc 179861738 Jun  4 06:45 HITS.45006595._036811.pool.root.1
[2025-06-04 06:51:40] -rw-r--r--. 1 boinc boinc       531 Jun  4 06:46 boinc_task_state.xml
[2025-06-04 06:51:40] -rw-------. 1 boinc boinc      1017 Jun  4 06:46 memory_monitor_summary.json
[2025-06-04 06:51:40] -rw-------. 1 boinc boinc   1603667 Jun  4 06:46 agis_ddmendpoints.agis.ALL.json
[2025-06-04 06:51:40] -rw-------. 1 boinc boinc    378682 Jun  4 06:46 log.45006595._036811.job.log.tgz.1
[2025-06-04 06:51:40] -rw-------. 1 boinc boinc        95 Jun  4 06:48 pilot_heartbeat.json
[2025-06-04 06:51:40] -rw-------. 1 boinc boinc      7693 Jun  4 06:48 heartbeat.json
[2025-06-04 06:51:40] -rw-------. 1 boinc boinc      4416 Jun  4 06:48 pilotlog.txt
[2025-06-04 06:51:40] -rw-------. 1 boinc boinc   1181880 Jun  4 06:48 log.45006595._036811.job.log.1
[2025-06-04 06:51:40] -rw-------. 1 boinc boinc       357 Jun  4 06:48 output.list
[2025-06-04 06:51:40] -rw-r--r--. 1 boinc boinc       620 Jun  4 06:48 runtime_log
[2025-06-04 06:51:40] -rw-------. 1 boinc boinc   1576960 Jun  4 06:48 result.tar.gz
[2025-06-04 06:51:40] -rw-r--r--. 1 boinc boinc      8659 Jun  4 06:48 runtime_log.err
[2025-06-04 06:51:40] -rw-------. 1 boinc boinc       656 Jun  4 06:48 evFODmQhig7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJnkKDm51p2em.diag
[2025-06-04 06:51:40] -rw-r--r--. 1 boinc boinc      8192 Jun  4 06:51 boinc_mmap_file
[2025-06-04 06:51:40] -rw-r--r--. 1 boinc boinc        28 Jun  4 06:51 wrapper_checkpoint.txt
[2025-06-04 06:51:40] -rw-r--r--. 1 boinc boinc     20536 Jun  4 06:51 stderr.txt
[2025-06-04 06:51:40] HITS file was successfully produced:
[2025-06-04 06:51:40] -rw-------. 1 boinc boinc 179861738 Jun  4 06:45 shared/HITS.pool.root.1
[2025-06-04 06:51:40]  *** Contents of shared directory: ***
[2025-06-04 06:51:40] total 386292
[2025-06-04 06:51:40] -rw-r--r--. 2 boinc boinc 213590278 Jun  4 02:51 ATLAS.root_0
[2025-06-04 06:51:40] -rw-r--r--. 2 boinc boinc     15093 Jun  4 02:51 start_atlas.sh
[2025-06-04 06:51:40] -rw-r--r--. 2 boinc boinc    508875 Jun  4 02:51 input.tar.gz
[2025-06-04 06:51:40] -rw-------. 1 boinc boinc 179861738 Jun  4 06:45 HITS.pool.root.1
[2025-06-04 06:51:40] -rw-------. 1 boinc boinc   1576960 Jun  4 06:48 result.tar.gz
06:51:42 (25299): run_atlas exited; CPU time 49539.991202
06:51:42 (25299): called boinc_finish(0)

</stderr_txt>
]]>

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