Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
03:58:11 (947770): wrapper (7.7.26015): starting
03:58:11 (947770): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 03:58:11] Arguments: --nthreads 3
[2025-06-04 03:58:11] Threads: 3
[2025-06-04 03:58:11] Checking for CVMFS
[2025-06-04 03:58:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 03:58:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 03:58:11] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 03:58:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 03:58:11] 2.9.2.0 360883 1903 68548 146763 2 56 32290997 36864000 0 130560 0 1604338 99.992 447536 56571 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 03:58:11] CVMFS is ok
[2025-06-04 03:58:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 03:58:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 03:58:11] Further information can be found at the LHC@home message board.
[2025-06-04 03:58:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 03:58:11] Checking for apptainer binary...
[2025-06-04 03:58:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 03:58:11] Running /usr/bin/apptainer --version
[2025-06-04 03:58:11] apptainer version 1.3.6-6.1
[2025-06-04 03:58:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 03:58:12] thA335
[2025-06-04 03:58:12] apptainer works
[2025-06-04 03:58:12] Set ATHENA_PROC_NUMBER=3
[2025-06-04 03:58:12] Set ATHENA_CORE_NUMBER=3
[2025-06-04 03:58:12] Starting ATLAS job with PandaID=6677734870
[2025-06-04 03:58:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 05:23:17]  *** The last 200 lines of the pilot log: ***
[2025-06-04 05:23:17]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 05:23:17]  replicas=None
[2025-06-04 05:23:17]  scope=mc23_13p6TeV
[2025-06-04 05:23:17]  status=None
[2025-06-04 05:23:17]  status_code=0
[2025-06-04 05:23:17]  storage_token=
[2025-06-04 05:23:17]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6677734870/log.45006595._037948.job.log.tgz.1
[2025-06-04 05:23:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d8/7a/log.45006595._037948.job.log.tgz.1
[2025-06-04 05:23:17]  workdir=None
[2025-06-04 05:23:17] ]
[2025-06-04 05:23:17] 2025-06-04 03:22:45,744 | INFO     | transferring file log.45006595._037948.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6677734870/log.45006595._037948.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 05:23:17] 2025-06-04 03:22:45,745 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6677734870/log.45006595._037948.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0379
[2025-06-04 05:23:17] 2025-06-04 03:22:45,757 | INFO     | adding to output.list: log.45006595._037948.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d8/7a/log.45006595._037948.job.log.tg
[2025-06-04 05:23:17] 2025-06-04 03:22:45,758 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 05:23:17] 2025-06-04 03:22:45,758 | INFO     | summary of transferred files:
[2025-06-04 05:23:17] 2025-06-04 03:22:45,758 | INFO     |  -- lfn=log.45006595._037948.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 05:23:17] 2025-06-04 03:22:45,758 | INFO     | stage-out finished correctly
[2025-06-04 05:23:17] 2025-06-04 03:22:47,395 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 05:23:17] 2025-06-04 03:22:47,443 | INFO     | PID=951414 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 05:23:17] 2025-06-04 03:22:47,764 | INFO     | monitor loop #390: job 0:6677734870 is in state 'finished'
[2025-06-04 05:23:17] 2025-06-04 03:22:47,764 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:23:17] 2025-06-04 03:22:49,216 | INFO     | job 6677734870 has state=finished
[2025-06-04 05:23:17] 2025-06-04 03:22:49,217 | INFO     | preparing for final server update for job 6677734870 in state='finished'
[2025-06-04 05:23:17] 2025-06-04 03:22:49,218 | INFO     | this job has now completed (state=finished)
[2025-06-04 05:23:17] 2025-06-04 03:22:49,218 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 05:23:17] 2025-06-04 03:22:49,218 | INFO     | log transfer has been attempted: DONE
[2025-06-04 05:23:17] 2025-06-04 03:22:49,219 | INFO     | job 6677734870 has finished - writing final server update
[2025-06-04 05:23:17] 2025-06-04 03:22:49,219 | INFO     | total number of processed events: 400 (read)
[2025-06-04 05:23:17] 2025-06-04 03:22:49,222 | INFO     | executing command: lscpu
[2025-06-04 05:23:17] 2025-06-04 03:22:49,235 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 05:23:17] 2025-06-04 03:22:50,267 | INFO     | monitor loop #391: job 0:6677734870 is in state 'finished'
[2025-06-04 05:23:17] 2025-06-04 03:22:50,267 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:23:17] 2025-06-04 03:22:50,453 | INFO     | 5067s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-04 05:23:17] 2025-06-04 03:22:52,770 | INFO     | monitor loop #392: job 0:6677734870 is in state 'finished'
[2025-06-04 05:23:17] 2025-06-04 03:22:52,771 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:23:17] 2025-06-04 03:22:55,273 | INFO     | monitor loop #393: job 0:6677734870 is in state 'finished'
[2025-06-04 05:23:17] 2025-06-04 03:22:55,273 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:23:17] 2025-06-04 03:22:57,777 | INFO     | monitor loop #394: job 0:6677734870 is in state 'finished'
[2025-06-04 05:23:17] 2025-06-04 03:22:57,777 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:23:17] 2025-06-04 03:22:58,637 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 05:23:17] 2025-06-04 03:22:58,637 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677734870/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 05:23:17] 2025-06-04 03:22:58,637 | INFO     | extracted standard info from prmon json
[2025-06-04 05:23:17] 2025-06-04 03:22:58,637 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 05:23:17] 2025-06-04 03:22:58,637 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 05:23:17] 2025-06-04 03:22:58,638 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 05:23:17] 2025-06-04 03:22:58,638 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 05:23:17] 2025-06-04 03:22:58,638 | INFO     | fitting pss+swap vs Time
[2025-06-04 05:23:17] 2025-06-04 03:22:58,638 | INFO     | sum of square deviations: 136095575.0
[2025-06-04 05:23:17] 2025-06-04 03:22:58,639 | INFO     | sum of deviations: -12025698783.0
[2025-06-04 05:23:17] 2025-06-04 03:22:58,639 | INFO     | mean x: 1749004921.5
[2025-06-04 05:23:17] 2025-06-04 03:22:58,639 | INFO     | mean y: 2514887.0
[2025-06-04 05:23:17] 2025-06-04 03:22:58,639 | INFO     | -- intersect: 154548365153.94336
[2025-06-04 05:23:17] 2025-06-04 03:22:58,639 | INFO     | intersect: 154548365153.94336
[2025-06-04 05:23:17] 2025-06-04 03:22:58,639 | INFO     | chi2: 0.03988570358958312
[2025-06-04 05:23:17] 2025-06-04 03:22:58,639 | INFO     | -- intersect: 154548365153.94336
[2025-06-04 05:23:17] 2025-06-04 03:22:58,639 | INFO     | current memory leak: -88.36 B/s (using 76 data points, chi2=0.04)
[2025-06-04 05:23:17] 2025-06-04 03:22:58,639 | INFO     | ..............................
[2025-06-04 05:23:17] 2025-06-04 03:22:58,639 | INFO     | . Timing measurements:
[2025-06-04 05:23:17] 2025-06-04 03:22:58,639 | INFO     | . get job = 0 s
[2025-06-04 05:23:17] 2025-06-04 03:22:58,639 | INFO     | . initial setup = 1 s
[2025-06-04 05:23:17] 2025-06-04 03:22:58,639 | INFO     | . payload setup = 5 s
[2025-06-04 05:23:17] 2025-06-04 03:22:58,639 | INFO     | . stage-in = 0 s
[2025-06-04 05:23:17] 2025-06-04 03:22:58,639 | INFO     | . payload execution = 5035 s
[2025-06-04 05:23:17] 2025-06-04 03:22:58,639 | INFO     | . stage-out = 0 s
[2025-06-04 05:23:17] 2025-06-04 03:22:58,639 | INFO     | . log creation = 0 s
[2025-06-04 05:23:17] 2025-06-04 03:22:58,639 | INFO     | ..............................
[2025-06-04 05:23:17] 2025-06-04 03:22:58,672 | INFO     | 
[2025-06-04 05:23:17] 2025-06-04 03:22:58,672 | INFO     | job summary report
[2025-06-04 05:23:17] 2025-06-04 03:22:58,672 | INFO     | --------------------------------------------------
[2025-06-04 05:23:17] 2025-06-04 03:22:58,672 | INFO     | PanDA job id: 6677734870
[2025-06-04 05:23:17] 2025-06-04 03:22:58,672 | INFO     | task id: 45006595
[2025-06-04 05:23:17] 2025-06-04 03:22:58,672 | INFO     | errors: (none)
[2025-06-04 05:23:17] 2025-06-04 03:22:58,672 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 05:23:17] 2025-06-04 03:22:58,672 | INFO     | pilot state: finished 
[2025-06-04 05:23:17] 2025-06-04 03:22:58,672 | INFO     | transexitcode: 0
[2025-06-04 05:23:17] 2025-06-04 03:22:58,672 | INFO     | exeerrorcode: 0
[2025-06-04 05:23:17] 2025-06-04 03:22:58,672 | INFO     | exeerrordiag: 
[2025-06-04 05:23:17] 2025-06-04 03:22:58,672 | INFO     | exitcode: 0
[2025-06-04 05:23:17] 2025-06-04 03:22:58,672 | INFO     | exitmsg: OK
[2025-06-04 05:23:17] 2025-06-04 03:22:58,672 | INFO     | cpuconsumptiontime: 14393 s
[2025-06-04 05:23:17] 2025-06-04 03:22:58,672 | INFO     | nevents: 400
[2025-06-04 05:23:17] 2025-06-04 03:22:58,672 | INFO     | neventsw: 0
[2025-06-04 05:23:17] 2025-06-04 03:22:58,672 | INFO     | pid: 957910
[2025-06-04 05:23:17] 2025-06-04 03:22:58,672 | INFO     | pgrp: 957910
[2025-06-04 05:23:17] 2025-06-04 03:22:58,672 | INFO     | corecount: 3
[2025-06-04 05:23:17] 2025-06-04 03:22:58,672 | INFO     | event service: False
[2025-06-04 05:23:17] 2025-06-04 03:22:58,672 | INFO     | sizes: {0: 2405187, 4: 2405393, 11: 2405421, 5045: 2440646, 5047: 2440646, 5058: 2440816}
[2025-06-04 05:23:17] 2025-06-04 03:22:58,672 | INFO     | --------------------------------------------------
[2025-06-04 05:23:17] 2025-06-04 03:22:58,672 | INFO     | 
[2025-06-04 05:23:17] 2025-06-04 03:22:58,672 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 05:23:17] 2025-06-04 03:22:58,684 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 05:23:17] 2025-06-04 03:22:58,684 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 05:23:17] 2025-06-04 03:22:58,684 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 05:23:17] 2025-06-04 03:22:58,684 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 05:23:17] 2025-06-04 03:22:58,684 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 05:23:17] 2025-06-04 03:22:58,684 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 05:23:17] 2025-06-04 03:22:58,684 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 05:23:17] 2025-06-04 03:22:58,684 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 05:23:17] 2025-06-04 03:22:58,685 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 05:23:17] 2025-06-04 03:22:58,685 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 05:23:17] 2025-06-04 03:22:58,685 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 05:23:17] 2025-06-04 03:22:58,685 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 05:23:17] 2025-06-04 03:22:58,685 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 05:23:17] 2025-06-04 03:22:58,685 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 05:23:17] 2025-06-04 03:22:58,685 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 05:23:17] 2025-06-04 03:22:58,685 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 05:23:17] 2025-06-04 03:22:58,685 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 05:23:17] 2025-06-04 03:22:58,685 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 05:23:17] 2025-06-04 03:22:58,685 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 05:23:17] 2025-06-04 03:22:58,685 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 05:23:17] 2025-06-04 03:22:58,685 | INFO     | job 6677734870 has completed (purged errors)
[2025-06-04 05:23:17] 2025-06-04 03:22:58,685 | INFO     | overall cleanup function is called
[2025-06-04 05:23:17] 2025-06-04 03:22:59,691 | INFO     | --- collectZombieJob: --- 10, [957910]
[2025-06-04 05:23:17] 2025-06-04 03:22:59,692 | INFO     | zombie collector waiting for pid 957910
[2025-06-04 05:23:17] 2025-06-04 03:22:59,692 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 05:23:17] 2025-06-04 03:22:59,692 | INFO     | collected zombie processes
[2025-06-04 05:23:17] 2025-06-04 03:22:59,692 | INFO     | will attempt to kill all subprocesses of pid=957910
[2025-06-04 05:23:17] 2025-06-04 03:22:59,734 | INFO     | process IDs to be killed: [957910] (in reverse order)
[2025-06-04 05:23:17] 2025-06-04 03:22:59,761 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 05:23:17] 2025-06-04 03:22:59,761 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 05:23:17] 2025-06-04 03:22:59,762 | INFO     | did not find any defunct processes belonging to 957910
[2025-06-04 05:23:17] 2025-06-04 03:22:59,763 | INFO     | did not find any defunct processes belonging to 957910
[2025-06-04 05:23:17] 2025-06-04 03:22:59,763 | INFO     | ready for new job
[2025-06-04 05:23:17] 2025-06-04 03:22:59,763 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 05:23:17] 2025-06-04 03:22:59,764 | INFO     | **************************************
[2025-06-04 05:23:17] 2025-06-04 03:22:59,764 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 05:23:17] 2025-06-04 03:22:59,764 | INFO     | **************************************
[2025-06-04 05:23:17] 2025-06-04 03:22:59,764 | INFO     | 
[2025-06-04 05:23:17] 2025-06-04 03:22:59,764 | INFO     | architecture information:
[2025-06-04 05:23:17] 2025-06-04 03:22:59,765 | INFO     | executing command: cat /etc/os-release
[2025-06-04 05:23:17] 2025-06-04 03:22:59,774 | INFO     | cat /etc/os-release:
[2025-06-04 05:23:17] NAME="CentOS Linux"
[2025-06-04 05:23:17] VERSION="7 (Core)"
[2025-06-04 05:23:17] ID="centos"
[2025-06-04 05:23:17] ID_LIKE="rhel fedora"
[2025-06-04 05:23:17] VERSION_ID="7"
[2025-06-04 05:23:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 05:23:17] ANSI_COLOR="0;31"
[2025-06-04 05:23:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 05:23:17] HOME_URL="https://www.centos.org/"
[2025-06-04 05:23:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 05:23:17] 
[2025-06-04 05:23:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 05:23:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 05:23:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 05:23:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 05:23:17] 
[2025-06-04 05:23:17] 2025-06-04 03:22:59,774 | INFO     | **************************************
[2025-06-04 05:23:17] 2025-06-04 03:23:00,277 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 05:23:17] 2025-06-04 03:23:00,292 | INFO     | sufficient remaining disk space (824581292032 B)
[2025-06-04 05:23:17] 2025-06-04 03:23:00,292 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 05:23:17] 2025-06-04 03:23:00,292 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 05:23:17] 2025-06-04 03:23:00,292 | INFO     | update_server=False
[2025-06-04 05:23:17] 2025-06-04 03:23:00,292 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 05:23:17] 2025-06-04 03:23:00,292 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:23:17] 2025-06-04 03:23:00,292 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 05:23:17] 2025-06-04 03:23:00,292 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 05:23:17] 2025-06-04 03:23:00,292 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 05:23:17] 2025-06-04 03:23:00,292 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 05:23:17] 2025-06-04 03:23:00,369 | INFO     | all data control threads have been joined
[2025-06-04 05:23:17] 2025-06-04 03:23:00,929 | INFO     | all payload control threads have been joined
[2025-06-04 05:23:17] 2025-06-04 03:23:01,284 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:23:17] 2025-06-04 03:23:01,285 | INFO     | aborting loop
[2025-06-04 05:23:17] 2025-06-04 03:23:01,297 | INFO     | [job] retrieve thread has finished
[2025-06-04 05:23:17] 2025-06-04 03:23:01,298 | INFO     | [job] queue monitor thread has finished
[2025-06-04 05:23:17] 2025-06-04 03:23:01,309 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 05:23:17] 2025-06-04 03:23:01,372 | INFO     | all job control threads have been joined
[2025-06-04 05:23:17] 2025-06-04 03:23:01,373 | INFO     | [data] control thread has finished
[2025-06-04 05:23:17] 2025-06-04 03:23:01,914 | INFO     | [payload] failed_post thread has finished
[2025-06-04 05:23:17] 2025-06-04 03:23:01,934 | INFO     | [payload] control thread has finished
[2025-06-04 05:23:17] 2025-06-04 03:23:02,067 | INFO     | [data] copytool_in thread has finished
[2025-06-04 05:23:17] 2025-06-04 03:23:02,290 | INFO     | [job] job monitor thread has finished
[2025-06-04 05:23:17] 2025-06-04 03:23:02,369 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 05:23:17] 2025-06-04 03:23:02,377 | INFO     | [job] control thread has finished
[2025-06-04 05:23:17] 2025-06-04 03:23:02,382 | INFO     | [payload] validate_post thread has finished
[2025-06-04 05:23:17] 2025-06-04 03:23:02,421 | INFO     | [job] validate thread has finished
[2025-06-04 05:23:17] 2025-06-04 03:23:02,426 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 05:23:17] 2025-06-04 03:23:02,439 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 05:23:17] 2025-06-04 03:23:02,736 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 05:23:17] 2025-06-04 03:23:03,315 | INFO     | [data] copytool_out thread has finished
[2025-06-04 05:23:17] 2025-06-04 03:23:06,446 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 05:23:17] 2025-06-04 03:23:10,697 | INFO     | job.realtimelogging is not enabled
[2025-06-04 05:23:17] 2025-06-04 03:23:11,703 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 05:23:17] 2025-06-04 03:23:11,802 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140509218342720)>', '<ExcThread(monitor, started 140508865206016)>']
[2025-06-04 05:23:17] 2025-06-04 03:23:12,354 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 05:23:17] 2025-06-04 03:23:12,354 | INFO     | [monitor] control thread has ended
[2025-06-04 05:23:17] 2025-06-04 03:23:16,828 | INFO     | all workflow threads have been joined
[2025-06-04 05:23:17] 2025-06-04 03:23:16,829 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 05:23:17] 2025-06-04 03:23:16,829 | INFO     | traces error code: 0
[2025-06-04 05:23:17] 2025-06-04 03:23:16,830 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 05:23:17] 2025-06-04 03:23:16,879 [wrapper] ==== pilot stdout END ====
[2025-06-04 05:23:17] 2025-06-04 03:23:16,883 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 05:23:17] 2025-06-04 03:23:16,886 [wrapper] pilotpid: 951414
[2025-06-04 05:23:17] 2025-06-04 03:23:16,888 [wrapper] Pilot exit status: 0
[2025-06-04 05:23:17] 2025-06-04 03:23:16,896 [wrapper] pandaids: 6677734870
[2025-06-04 05:23:17] 2025-06-04 03:23:16,914 [wrapper] cleanup supervisor_pilot  969953 951415
[2025-06-04 05:23:17] 2025-06-04 03:23:16,917 [wrapper] Test setup, not cleaning
[2025-06-04 05:23:17] 2025-06-04 03:23:16,920 [wrapper] apfmon messages muted
[2025-06-04 05:23:17] 2025-06-04 03:23:16,923 [wrapper] ==== wrapper stdout END ====
[2025-06-04 05:23:17] 2025-06-04 03:23:16,925 [wrapper] ==== wrapper stderr END ====
[2025-06-04 05:23:17]  *** Error codes and diagnostics ***
[2025-06-04 05:23:17]     "exeErrorCode": 0,
[2025-06-04 05:23:17]     "exeErrorDiag": "",
[2025-06-04 05:23:17]     "pilotErrorCode": 0,
[2025-06-04 05:23:17]     "pilotErrorDiag": "",
[2025-06-04 05:23:17]  *** Listing of results directory ***
[2025-06-04 05:23:17] total 393756
[2025-06-04 05:23:17] -rw-r--r-- 1 boinc boinc    495897 Jun  3 18:03 pilot3.tar.gz
[2025-06-04 05:23:17] -rwx------ 1 boinc boinc     37140 Jun  3 18:06 runpilot2-wrapper.sh
[2025-06-04 05:23:17] -rw-r--r-- 1 boinc boinc      5111 Jun  3 18:06 queuedata.json
[2025-06-04 05:23:17] -rw-r--r-- 1 boinc boinc       100 Jun  4 03:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 05:23:17] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 03:58 run_atlas
[2025-06-04 05:23:17] -rw-r--r-- 1 boinc boinc       105 Jun  4 03:58 job.xml
[2025-06-04 05:23:17] -rw-r--r-- 2 boinc boinc 215300530 Jun  4 03:58 EVNT.45006593._001523.pool.root.1
[2025-06-04 05:23:17] -rw-r--r-- 1 boinc boinc      6678 Jun  4 03:58 init_data.xml
[2025-06-04 05:23:17] drwxrwx--x 2 boinc boinc      4096 Jun  4 03:58 shared
[2025-06-04 05:23:17] -rw-r--r-- 2 boinc boinc    508879 Jun  4 03:58 input.tar.gz
[2025-06-04 05:23:17] -rw-r--r-- 2 boinc boinc     15093 Jun  4 03:58 start_atlas.sh
[2025-06-04 05:23:17] -rw-r--r-- 1 boinc boinc         0 Jun  4 03:58 boinc_lockfile
[2025-06-04 05:23:17] -rw-r--r-- 1 boinc boinc      2525 Jun  4 03:58 pandaJob.out
[2025-06-04 05:23:17] -rw------- 1 boinc boinc    986077 Jun  4 03:58 agis_schedconf.cvmfs.json
[2025-06-04 05:23:17] -rw------- 1 boinc boinc   1603667 Jun  4 03:58 agis_ddmendpoints.agis.ALL.json
[2025-06-04 05:23:17] drwx------ 4 boinc boinc      4096 Jun  4 03:58 pilot3
[2025-06-04 05:23:17] -rw------- 1 boinc boinc 182619496 Jun  4 05:22 HITS.45006595._037948.pool.root.1
[2025-06-04 05:23:17] -rw-r--r-- 1 boinc boinc       529 Jun  4 05:22 boinc_task_state.xml
[2025-06-04 05:23:17] -rw------- 1 boinc boinc      1018 Jun  4 05:22 memory_monitor_summary.json
[2025-06-04 05:23:17] -rw------- 1 boinc boinc    234894 Jun  4 05:22 log.45006595._037948.job.log.tgz.1
[2025-06-04 05:23:17] -rw------- 1 boinc boinc        95 Jun  4 05:22 pilot_heartbeat.json
[2025-06-04 05:23:17] -rw------- 1 boinc boinc      7656 Jun  4 05:22 heartbeat.json
[2025-06-04 05:23:17] -rw-r--r-- 1 boinc boinc      8192 Jun  4 05:23 boinc_mmap_file
[2025-06-04 05:23:17] -rw-r--r-- 1 boinc boinc        27 Jun  4 05:23 wrapper_checkpoint.txt
[2025-06-04 05:23:17] -rw------- 1 boinc boinc      4552 Jun  4 05:23 pilotlog.txt
[2025-06-04 05:23:17] -rw------- 1 boinc boinc    490650 Jun  4 05:23 log.45006595._037948.job.log.1
[2025-06-04 05:23:17] -rw------- 1 boinc boinc       357 Jun  4 05:23 output.list
[2025-06-04 05:23:17] -rw-r--r-- 1 boinc boinc       620 Jun  4 05:23 runtime_log
[2025-06-04 05:23:17] -rw------- 1 boinc boinc    747520 Jun  4 05:23 result.tar.gz
[2025-06-04 05:23:17] -rw-r--r-- 1 boinc boinc      8733 Jun  4 05:23 runtime_log.err
[2025-06-04 05:23:17] -rw------- 1 boinc boinc       658 Jun  4 05:23 E9KKDmBLjg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmFBZKDmwGfwNm.diag
[2025-06-04 05:23:17] -rw-r--r-- 1 boinc boinc     21897 Jun  4 05:23 stderr.txt
[2025-06-04 05:23:17] HITS file was successfully produced:
[2025-06-04 05:23:17] -rw------- 1 boinc boinc 182619496 Jun  4 05:22 shared/HITS.pool.root.1
[2025-06-04 05:23:17]  *** Contents of shared directory: ***
[2025-06-04 05:23:17] total 389848
[2025-06-04 05:23:17] -rw-r--r-- 2 boinc boinc 215300530 Jun  4 03:58 ATLAS.root_0
[2025-06-04 05:23:17] -rw-r--r-- 2 boinc boinc    508879 Jun  4 03:58 input.tar.gz
[2025-06-04 05:23:17] -rw-r--r-- 2 boinc boinc     15093 Jun  4 03:58 start_atlas.sh
[2025-06-04 05:23:17] -rw------- 1 boinc boinc 182619496 Jun  4 05:22 HITS.pool.root.1
[2025-06-04 05:23:17] -rw------- 1 boinc boinc    747520 Jun  4 05:23 result.tar.gz
05:23:18 (947770): run_atlas exited; CPU time 14419.246725
05:23:18 (947770): called boinc_finish(0)

</stderr_txt>
]]>

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