Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:23:23 (27582): wrapper (7.7.26015): starting
04:23:23 (27582): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 04:23:23] Arguments: --nthreads 8
[2025-06-04 04:23:23] Threads: 8
[2025-06-04 04:23:23] Checking for CVMFS
[2025-06-04 04:23:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 04:23:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 04:23:23] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 04:23:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 04:23:24] 2.11.2.0 27863 32784 92748 146763 3 60 20210712 25165825 4297 130560 0 15990536 99.762 19330890 4759 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 04:23:24] CVMFS is ok
[2025-06-04 04:23:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 04:23:24] Checking for apptainer binary...
[2025-06-04 04:23:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 04:23:24] Running /usr/bin/apptainer --version
[2025-06-04 04:23:24] apptainer version 1.3.2-1.el7
[2025-06-04 04:23:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 04:23:33] cg-vwn495.simple-grid.lan
[2025-06-04 04:23:33] apptainer works
[2025-06-04 04:23:33] Set ATHENA_PROC_NUMBER=8
[2025-06-04 04:23:33] Set ATHENA_CORE_NUMBER=8
[2025-06-04 04:23:33] Starting ATLAS job with PandaID=6677677149
[2025-06-04 04:23:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:28:59]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:28:59] 2025-06-04 05:58:27,809 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:28:59] 2025-06-04 05:58:27,809 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:28:59] 2025-06-04 05:58:27,809 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:28:59] 2025-06-04 05:58:27,809 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:28:59] 2025-06-04 05:58:27,814 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:28:59] 2025-06-04 05:58:27,815 | INFO     | sum of square deviations: 2443580700.0
[2025-06-04 08:28:59] 2025-06-04 05:58:27,816 | INFO     | sum of deviations: 81114042034.0
[2025-06-04 08:28:59] 2025-06-04 05:58:27,816 | INFO     | mean x: 1749010578.0
[2025-06-04 08:28:59] 2025-06-04 05:58:27,816 | INFO     | mean y: 2405367.7085427134
[2025-06-04 08:28:59] 2025-06-04 05:58:27,817 | INFO     | -- intersect: -58055557498.75322
[2025-06-04 08:28:59] 2025-06-04 05:58:27,817 | INFO     | intersect: -58055557498.75322
[2025-06-04 08:28:59] 2025-06-04 05:58:27,817 | INFO     | chi2: 6.978359711710753
[2025-06-04 08:28:59] 2025-06-04 05:58:27,818 | INFO     | sum of square deviations: 2263977332.5
[2025-06-04 08:28:59] 2025-06-04 05:58:27,819 | INFO     | sum of deviations: 91839829536.0
[2025-06-04 08:28:59] 2025-06-04 05:58:27,819 | INFO     | mean x: 1749010425.5
[2025-06-04 08:28:59] 2025-06-04 05:58:27,819 | INFO     | mean y: 2414248.350515464
[2025-06-04 08:28:59] 2025-06-04 05:58:27,819 | INFO     | -- intersect: -70947421259.60144
[2025-06-04 08:28:59] 2025-06-04 05:58:27,819 | INFO     | intersect: -70947421259.60144
[2025-06-04 08:28:59] 2025-06-04 05:58:27,820 | INFO     | chi2: 6.282459016676963
[2025-06-04 08:28:59] 2025-06-04 05:58:27,820 | INFO     | current chi2=6.282459016676963 (change=9.972267463741687 %)
[2025-06-04 08:28:59] 2025-06-04 05:58:27,820 | INFO     | right removable region: 193
[2025-06-04 08:28:59] 2025-06-04 05:58:27,830 | INFO     | sum of square deviations: 2263977332.5
[2025-06-04 08:28:59] 2025-06-04 05:58:27,831 | INFO     | sum of deviations: 13129552220.999998
[2025-06-04 08:28:59] 2025-06-04 05:58:27,831 | INFO     | mean x: 1749010730.5
[2025-06-04 08:28:59] 2025-06-04 05:58:27,832 | INFO     | mean y: 2463042.1649484537
[2025-06-04 08:28:59] 2025-06-04 05:58:27,832 | INFO     | -- intersect: -10140627788.091457
[2025-06-04 08:28:59] 2025-06-04 05:58:27,832 | INFO     | intersect: -10140627788.091457
[2025-06-04 08:28:59] 2025-06-04 05:58:27,832 | INFO     | chi2: 2.0937952455380846
[2025-06-04 08:28:59] 2025-06-04 05:58:27,832 | INFO     | current chi2=2.0937952455380846 (change=69.99588252774679 %)
[2025-06-04 08:28:59] 2025-06-04 05:58:27,833 | INFO     | sum of square deviations: 2093397390.0
[2025-06-04 08:28:59] 2025-06-04 05:58:27,834 | INFO     | sum of deviations: -17782727808.0
[2025-06-04 08:28:59] 2025-06-04 05:58:27,834 | INFO     | mean x: 1749010883.0
[2025-06-04 08:28:59] 2025-06-04 05:58:27,834 | INFO     | mean y: 2490450.9206349207
[2025-06-04 08:28:59] 2025-06-04 05:58:27,835 | INFO     | -- intersect: 14859767246.1395
[2025-06-04 08:28:59] 2025-06-04 05:58:27,835 | INFO     | intersect: 14859767246.1395
[2025-06-04 08:28:59] 2025-06-04 05:58:27,835 | INFO     | chi2: 0.8642237347813062
[2025-06-04 08:28:59] 2025-06-04 05:58:27,835 | INFO     | current chi2=0.8642237347813062 (change=58.72453447284387 %)
[2025-06-04 08:28:59] 2025-06-04 05:58:27,836 | INFO     | sum of square deviations: 1931608310.0
[2025-06-04 08:28:59] 2025-06-04 05:58:27,837 | INFO     | sum of deviations: -13249526624.5
[2025-06-04 08:28:59] 2025-06-04 05:58:27,837 | INFO     | mean x: 1749011035.5
[2025-06-04 08:28:59] 2025-06-04 05:58:27,837 | INFO     | mean y: 2486139.7445652173
[2025-06-04 08:28:59] 2025-06-04 05:58:27,837 | INFO     | -- intersect: 11999518955.05771
[2025-06-04 08:28:59] 2025-06-04 05:58:27,838 | INFO     | intersect: 11999518955.05771
[2025-06-04 08:28:59] 2025-06-04 05:58:27,838 | INFO     | chi2: 0.8393252110045707
[2025-06-04 08:28:59] 2025-06-04 05:58:27,838 | INFO     | current chi2=0.8393252110045707 (change=2.8810275365830056 %)
[2025-06-04 08:28:59] 2025-06-04 05:58:27,838 | INFO     | left removable region: 30
[2025-06-04 08:28:59] 2025-06-04 05:58:27,839 | INFO     | sum of square deviations: 1342841922.0
[2025-06-04 08:28:59] 2025-06-04 05:58:27,840 | INFO     | sum of deviations: 3671263955.0000005
[2025-06-04 08:28:59] 2025-06-04 05:58:27,840 | INFO     | mean x: 1749011310.0
[2025-06-04 08:28:59] 2025-06-04 05:58:27,840 | INFO     | mean y: 2493115.791411043
[2025-06-04 08:28:59] 2025-06-04 05:58:27,840 | INFO     | -- intersect: -4779218025.403011
[2025-06-04 08:28:59] 2025-06-04 05:58:27,840 | INFO     | intersect: -4779218025.403011
[2025-06-04 08:28:59] 2025-06-04 05:58:27,841 | INFO     | chi2: 0.0006501199574110128
[2025-06-04 08:28:59] 2025-06-04 05:58:27,841 | INFO     | -- intersect: -4779218025.403011
[2025-06-04 08:28:59] 2025-06-04 05:58:27,841 | INFO     | current memory leak: 2.73 B/s (using 163 data points, chi2=0.00)
[2025-06-04 08:28:59] 2025-06-04 05:58:27,853 | INFO     | ..............................
[2025-06-04 08:28:59] 2025-06-04 05:58:27,853 | INFO     | . Timing measurements:
[2025-06-04 08:28:59] 2025-06-04 05:58:27,853 | INFO     | . get job = 0 s
[2025-06-04 08:28:59] 2025-06-04 05:58:27,853 | INFO     | . initial setup = 14 s
[2025-06-04 08:28:59] 2025-06-04 05:58:27,853 | INFO     | . payload setup = 187 s
[2025-06-04 08:28:59] 2025-06-04 05:58:27,853 | INFO     | . stage-in = 0 s
[2025-06-04 08:28:59] 2025-06-04 05:58:27,854 | INFO     | . payload execution = 12234 s
[2025-06-04 08:28:59] 2025-06-04 05:58:27,854 | INFO     | . stage-out = 3 s
[2025-06-04 08:28:59] 2025-06-04 05:58:27,854 | INFO     | . log creation = 0 s
[2025-06-04 08:28:59] 2025-06-04 05:58:27,854 | INFO     | ..............................
[2025-06-04 08:28:59] 2025-06-04 05:58:28,020 | INFO     | 
[2025-06-04 08:28:59] 2025-06-04 05:58:28,021 | INFO     | job summary report
[2025-06-04 08:28:59] 2025-06-04 05:58:28,021 | INFO     | --------------------------------------------------
[2025-06-04 08:28:59] 2025-06-04 05:58:28,021 | INFO     | PanDA job id: 6677677149
[2025-06-04 08:28:59] 2025-06-04 05:58:28,021 | INFO     | task id: 45006595
[2025-06-04 08:28:59] 2025-06-04 05:58:28,021 | INFO     | errors: (none)
[2025-06-04 08:28:59] 2025-06-04 05:58:28,021 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:28:59] 2025-06-04 05:58:28,021 | INFO     | pilot state: finished 
[2025-06-04 08:28:59] 2025-06-04 05:58:28,022 | INFO     | transexitcode: 0
[2025-06-04 08:28:59] 2025-06-04 05:58:28,022 | INFO     | exeerrorcode: 0
[2025-06-04 08:28:59] 2025-06-04 05:58:28,022 | INFO     | exeerrordiag: 
[2025-06-04 08:28:59] 2025-06-04 05:58:28,022 | INFO     | exitcode: 0
[2025-06-04 08:28:59] 2025-06-04 05:58:28,022 | INFO     | exitmsg: OK
[2025-06-04 08:28:59] 2025-06-04 05:58:28,022 | INFO     | cpuconsumptiontime: 45473 s
[2025-06-04 08:28:59] 2025-06-04 05:58:28,022 | INFO     | nevents: 400
[2025-06-04 08:28:59] 2025-06-04 05:58:28,022 | INFO     | neventsw: 0
[2025-06-04 08:28:59] 2025-06-04 05:58:28,022 | INFO     | pid: 9550
[2025-06-04 08:28:59] 2025-06-04 05:58:28,023 | INFO     | pgrp: 9550
[2025-06-04 08:28:59] 2025-06-04 05:58:28,023 | INFO     | corecount: 8
[2025-06-04 08:28:59] 2025-06-04 05:58:28,023 | INFO     | event service: False
[2025-06-04 08:28:59] 2025-06-04 05:58:28,023 | INFO     | sizes: {0: 2405014, 1: 2405213, 2: 2405213, 12: 2405241, 23: 2405269, 34: 2405297, 45: 2405453, 55: 2405481, 66: 2405509, 77: 2405537, 87: 2405593, 91: 2406107, 98
[2025-06-04 08:28:59] 2025-06-04 05:58:28,023 | INFO     | --------------------------------------------------
[2025-06-04 08:28:59] 2025-06-04 05:58:28,023 | INFO     | 
[2025-06-04 08:28:59] 2025-06-04 05:58:28,023 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-04 08:28:59] 2025-06-04 05:58:28,290 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:28:59] 2025-06-04 05:58:28,291 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:28:59] 2025-06-04 05:58:28,291 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:28:59] 2025-06-04 05:58:28,291 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:28:59] 2025-06-04 05:58:28,291 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:28:59] 2025-06-04 05:58:28,291 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:28:59] 2025-06-04 05:58:28,291 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:28:59] 2025-06-04 05:58:28,291 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:28:59] 2025-06-04 05:58:28,291 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:28:59] 2025-06-04 05:58:28,291 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:28:59] 2025-06-04 05:58:28,292 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:28:59] 2025-06-04 05:58:28,292 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:28:59] 2025-06-04 05:58:28,292 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:28:59] 2025-06-04 05:58:28,292 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:28:59] 2025-06-04 05:58:28,292 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:28:59] 2025-06-04 05:58:28,292 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:28:59] 2025-06-04 05:58:28,292 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:28:59] 2025-06-04 05:58:28,292 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:28:59] 2025-06-04 05:58:28,292 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:28:59] 2025-06-04 05:58:28,292 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:28:59] 2025-06-04 05:58:28,293 | INFO     | job 6677677149 has completed (purged errors)
[2025-06-04 08:28:59] 2025-06-04 05:58:28,293 | INFO     | overall cleanup function is called
[2025-06-04 08:28:59] 2025-06-04 05:58:29,301 | INFO     | --- collectZombieJob: --- 10, [9550]
[2025-06-04 08:28:59] 2025-06-04 05:58:29,302 | INFO     | zombie collector waiting for pid 9550
[2025-06-04 08:28:59] 2025-06-04 05:58:29,302 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:28:59] 2025-06-04 05:58:29,302 | INFO     | collected zombie processes
[2025-06-04 08:28:59] 2025-06-04 05:58:29,302 | INFO     | will attempt to kill all subprocesses of pid=9550
[2025-06-04 08:28:59] 2025-06-04 05:58:29,426 | INFO     | process IDs to be killed: [9550] (in reverse order)
[2025-06-04 08:28:59] 2025-06-04 05:58:29,988 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:28:59] 2025-06-04 05:58:29,988 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:28:59] 2025-06-04 05:58:29,992 | INFO     | did not find any defunct processes belonging to 9550
[2025-06-04 08:28:59] 2025-06-04 05:58:29,995 | INFO     | did not find any defunct processes belonging to 9550
[2025-06-04 08:28:59] 2025-06-04 05:58:29,995 | INFO     | ready for new job
[2025-06-04 08:28:59] 2025-06-04 05:58:29,996 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:28:59] 2025-06-04 05:58:29,997 | INFO     | **************************************
[2025-06-04 08:28:59] 2025-06-04 05:58:29,997 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:28:59] 2025-06-04 05:58:29,997 | INFO     | **************************************
[2025-06-04 08:28:59] 2025-06-04 05:58:29,998 | INFO     | 
[2025-06-04 08:28:59] 2025-06-04 05:58:29,998 | INFO     | pilot is running in a VM
[2025-06-04 08:28:59] 2025-06-04 05:58:29,998 | INFO     | architecture information:
[2025-06-04 08:28:59] 2025-06-04 05:58:30,011 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:28:59] 2025-06-04 05:58:30,044 | INFO     | cat /etc/os-release:
[2025-06-04 08:28:59] NAME="CentOS Linux"
[2025-06-04 08:28:59] VERSION="7 (Core)"
[2025-06-04 08:28:59] ID="centos"
[2025-06-04 08:28:59] ID_LIKE="rhel fedora"
[2025-06-04 08:28:59] VERSION_ID="7"
[2025-06-04 08:28:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:28:59] ANSI_COLOR="0;31"
[2025-06-04 08:28:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:28:59] HOME_URL="https://www.centos.org/"
[2025-06-04 08:28:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:28:59] 
[2025-06-04 08:28:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:28:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:28:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:28:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:28:59] 
[2025-06-04 08:28:59] 2025-06-04 05:58:30,045 | INFO     | **************************************
[2025-06-04 08:28:59] 2025-06-04 05:58:30,549 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-04 08:28:59] 2025-06-04 05:58:30,720 | INFO     | sufficient remaining disk space (496791191552 B)
[2025-06-04 08:28:59] 2025-06-04 05:58:30,721 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:28:59] 2025-06-04 05:58:30,721 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:28:59] 2025-06-04 05:58:30,721 | INFO     | update_server=False
[2025-06-04 08:28:59] 2025-06-04 05:58:30,721 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:28:59] 2025-06-04 05:58:30,808 | INFO     | all data control threads have been joined
[2025-06-04 08:28:59] 2025-06-04 05:58:30,879 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:28:59] 2025-06-04 05:58:31,062 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 08:28:59] 2025-06-04 05:58:31,063 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 08:28:59] 2025-06-04 05:58:31,063 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:28:59] 2025-06-04 05:58:31,063 | INFO     | will abort loop
[2025-06-04 08:28:59] 2025-06-04 05:58:31,253 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:28:59] 2025-06-04 05:58:31,333 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:28:59] 2025-06-04 05:58:31,333 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:28:59] 2025-06-04 05:58:31,333 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:28:59] 2025-06-04 05:58:31,611 | INFO     | all payload control threads have been joined
[2025-06-04 08:28:59] 2025-06-04 05:58:31,726 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:28:59] 2025-06-04 05:58:31,802 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:28:59] 2025-06-04 05:58:31,814 | INFO     | [data] control thread has finished
[2025-06-04 08:28:59] 2025-06-04 05:58:31,923 | INFO     | all job control threads have been joined
[2025-06-04 08:28:59] 2025-06-04 05:58:32,060 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:28:59] 2025-06-04 05:58:32,069 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:28:59] 2025-06-04 05:58:32,088 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:28:59] 2025-06-04 05:58:32,096 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:28:59] 2025-06-04 05:58:32,209 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:28:59] 2025-06-04 05:58:32,386 | INFO     | [job] validate thread has finished
[2025-06-04 08:28:59] 2025-06-04 05:58:32,618 | INFO     | [payload] control thread has finished
[2025-06-04 08:28:59] 2025-06-04 05:58:32,696 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:28:59] 2025-06-04 05:58:32,887 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:28:59] 2025-06-04 05:58:32,930 | INFO     | [job] control thread has finished
[2025-06-04 08:28:59] 2025-06-04 05:58:33,033 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:28:59] 2025-06-04 05:58:33,147 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:28:59] 2025-06-04 05:58:34,039 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:28:59] 2025-06-04 05:58:35,262 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:28:59] 2025-06-04 05:58:36,707 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140500581447488)>', '<ExcThread(monitor, started 140499713255168)>']
[2025-06-04 08:28:59] 2025-06-04 05:58:37,368 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:28:59] 2025-06-04 05:58:37,369 | INFO     | [monitor] control thread has ended
[2025-06-04 08:28:59] 2025-06-04 05:58:41,731 | INFO     | all workflow threads have been joined
[2025-06-04 08:28:59] 2025-06-04 05:58:41,732 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:28:59] 2025-06-04 05:58:41,732 | INFO     | traces error code: 0
[2025-06-04 08:28:59] 2025-06-04 05:58:41,732 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:28:59] 2025-06-04 05:58:42,047 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:28:59] 2025-06-04 05:58:42,078 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:28:59] 2025-06-04 05:58:42,136 [wrapper] pilotpid: 916
[2025-06-04 08:28:59] 2025-06-04 05:58:42,235 [wrapper] Pilot exit status: 0
[2025-06-04 08:28:59] 2025-06-04 05:58:42,751 [wrapper] pandaids: 6677677149
[2025-06-04 08:28:59] 2025-06-04 05:58:43,442 [wrapper] cleanup supervisor_pilot  7755 917
[2025-06-04 08:28:59] 2025-06-04 05:58:43,544 [wrapper] Test setup, not cleaning
[2025-06-04 08:28:59] 2025-06-04 05:58:43,660 [wrapper] apfmon messages muted
[2025-06-04 08:28:59] 2025-06-04 05:58:43,756 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:28:59] 2025-06-04 05:58:43,846 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:28:59]  *** Error codes and diagnostics ***
[2025-06-04 08:28:59]     "exeErrorCode": 0,
[2025-06-04 08:28:59]     "exeErrorDiag": "",
[2025-06-04 08:28:59]     "pilotErrorCode": 0,
[2025-06-04 08:28:59]     "pilotErrorDiag": "",
[2025-06-04 08:28:59]  *** Listing of results directory ***
[2025-06-04 08:28:59] total 392184
[2025-06-04 08:28:59] -rw-r--r--. 1 boinc boinc      5111 Jun  3 17:34 queuedata.json
[2025-06-04 08:28:59] -rwx------. 1 boinc boinc     37140 Jun  3 17:35 runpilot2-wrapper.sh
[2025-06-04 08:28:59] -rw-r--r--. 1 boinc boinc    495897 Jun  3 17:35 pilot3.tar.gz
[2025-06-04 08:28:59] -rw-r--r--. 1 boinc boinc       100 Jun  4 04:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:28:59] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 04:23 run_atlas
[2025-06-04 08:28:59] -rw-r--r--. 1 boinc boinc       105 Jun  4 04:23 job.xml
[2025-06-04 08:28:59] -rw-r--r--. 1 boinc boinc      6392 Jun  4 04:23 init_data.xml
[2025-06-04 08:28:59] -rw-r--r--. 2 boinc boinc 216119589 Jun  4 04:23 EVNT.45006593._001488.pool.root.1
[2025-06-04 08:28:59] -rw-r--r--. 2 boinc boinc     15093 Jun  4 04:23 start_atlas.sh
[2025-06-04 08:28:59] drwxrwx--x. 2 boinc boinc        68 Jun  4 04:23 shared
[2025-06-04 08:28:59] -rw-r--r--. 2 boinc boinc    508876 Jun  4 04:23 input.tar.gz
[2025-06-04 08:28:59] -rw-r--r--. 1 boinc boinc         0 Jun  4 04:23 boinc_lockfile
[2025-06-04 08:28:59] -rw-r--r--. 1 boinc boinc      2525 Jun  4 04:23 pandaJob.out
[2025-06-04 08:28:59] -rw-------. 1 boinc boinc    986077 Jun  4 04:26 agis_schedconf.cvmfs.json
[2025-06-04 08:28:59] drwx------. 4 boinc boinc      4096 Jun  4 04:26 pilot3
[2025-06-04 08:28:59] -rw-------. 1 boinc boinc 178762980 Jun  4 07:56 HITS.45006595._037031.pool.root.1
[2025-06-04 08:28:59] -rw-r--r--. 1 boinc boinc       531 Jun  4 07:56 boinc_task_state.xml
[2025-06-04 08:28:59] -rw-------. 1 boinc boinc      1017 Jun  4 07:56 memory_monitor_summary.json
[2025-06-04 08:28:59] -rw-------. 1 boinc boinc   1603667 Jun  4 07:57 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:28:59] -rw-------. 1 boinc boinc    361151 Jun  4 07:57 log.45006595._037031.job.log.tgz.1
[2025-06-04 08:28:59] -rw-------. 1 boinc boinc        95 Jun  4 07:57 pilot_heartbeat.json
[2025-06-04 08:28:59] -rw-------. 1 boinc boinc      7689 Jun  4 07:58 heartbeat.json
[2025-06-04 08:28:59] -rw-------. 1 boinc boinc      4603 Jun  4 07:58 pilotlog.txt
[2025-06-04 08:28:59] -rw-------. 1 boinc boinc   1085151 Jun  4 07:58 log.45006595._037031.job.log.1
[2025-06-04 08:28:59] -rw-------. 1 boinc boinc       357 Jun  4 07:58 output.list
[2025-06-04 08:28:59] -rw-r--r--. 1 boinc boinc       620 Jun  4 07:58 runtime_log
[2025-06-04 08:28:59] -rw-------. 1 boinc boinc   1464320 Jun  4 07:58 result.tar.gz
[2025-06-04 08:28:59] -rw-r--r--. 1 boinc boinc      8673 Jun  4 07:58 runtime_log.err
[2025-06-04 08:28:59] -rw-------. 1 boinc boinc       656 Jun  4 07:58 BvJNDmArig7n9Rq4apOajLDm4fhM0noT9bVof3QYDmS4YKDmFtqEAo.diag
[2025-06-04 08:28:59] -rw-r--r--. 1 boinc boinc      8192 Jun  4 08:28 boinc_mmap_file
[2025-06-04 08:28:59] -rw-r--r--. 1 boinc boinc        28 Jun  4 08:28 wrapper_checkpoint.txt
[2025-06-04 08:28:59] -rw-r--r--. 1 boinc boinc     20482 Jun  4 08:28 stderr.txt
[2025-06-04 08:28:59] HITS file was successfully produced:
[2025-06-04 08:28:59] -rw-------. 1 boinc boinc 178762980 Jun  4 07:56 shared/HITS.pool.root.1
[2025-06-04 08:28:59]  *** Contents of shared directory: ***
[2025-06-04 08:28:59] total 387580
[2025-06-04 08:28:59] -rw-r--r--. 2 boinc boinc 216119589 Jun  4 04:23 ATLAS.root_0
[2025-06-04 08:28:59] -rw-r--r--. 2 boinc boinc     15093 Jun  4 04:23 start_atlas.sh
[2025-06-04 08:28:59] -rw-r--r--. 2 boinc boinc    508876 Jun  4 04:23 input.tar.gz
[2025-06-04 08:28:59] -rw-------. 1 boinc boinc 178762980 Jun  4 07:56 HITS.pool.root.1
[2025-06-04 08:28:59] -rw-------. 1 boinc boinc   1464320 Jun  4 07:58 result.tar.gz
08:29:01 (27582): run_atlas exited; CPU time 45637.117574
08:29:01 (27582): called boinc_finish(0)

</stderr_txt>
]]>

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