Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:12:56 (1983353): wrapper (7.7.26015): starting
14:12:56 (1983353): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 14:12:56] Arguments: --nthreads 8
[2025-06-03 14:12:56] Threads: 8
[2025-06-03 14:12:56] Checking for CVMFS
[2025-06-03 14:12:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 14:12:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 14:12:56] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 14:12:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 14:12:56] 2.12.6.0 706982 37907 290400 146751 1 312 23969549 25181185 8386 16776704 3 190010098 99.558 220204413 24644 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 14:12:56] CVMFS is ok
[2025-06-03 14:12:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 14:12:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 14:12:56] Further information can be found at the LHC@home message board.
[2025-06-03 14:12:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 14:12:56] Checking for apptainer binary...
[2025-06-03 14:12:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 14:12:56] Running /usr/bin/apptainer --version
[2025-06-03 14:12:57] apptainer version 1.4.1-1.el9
[2025-06-03 14:12:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 14:12:57] c-16-34.aglt2.org
[2025-06-03 14:12:57] apptainer works
[2025-06-03 14:12:57] Set ATHENA_PROC_NUMBER=8
[2025-06-03 14:12:57] Set ATHENA_CORE_NUMBER=8
[2025-06-03 14:12:57] Starting ATLAS job with PandaID=6677733447
[2025-06-03 14:12:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 20:25:11]  *** The last 200 lines of the pilot log: ***
[2025-06-03 20:25:11] 2025-06-04 00:24:55,082 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 20:25:11] 2025-06-04 00:24:55,082 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677733447/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 20:25:11] 2025-06-04 00:24:55,083 | INFO     | extracted standard info from prmon json
[2025-06-03 20:25:11] 2025-06-04 00:24:55,083 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 20:25:11] 2025-06-04 00:24:55,084 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 20:25:11] 2025-06-04 00:24:55,084 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 20:25:11] 2025-06-04 00:24:55,084 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 20:25:11] 2025-06-04 00:24:55,092 | INFO     | fitting pss+swap vs Time
[2025-06-03 20:25:11] 2025-06-04 00:24:55,092 | INFO     | sum of square deviations: 15077642655.495806
[2025-06-03 20:25:11] 2025-06-04 00:24:55,096 | INFO     | sum of deviations: 142191624174.25204
[2025-06-03 20:25:11] 2025-06-04 00:24:55,097 | INFO     | mean x: 1748985522.320548
[2025-06-03 20:25:11] 2025-06-04 00:24:55,097 | INFO     | mean y: 2088258.3397260273
[2025-06-03 20:25:11] 2025-06-04 00:24:55,097 | INFO     | -- intersect: -16491941860.179054
[2025-06-03 20:25:11] 2025-06-04 00:24:55,097 | INFO     | intersect: -16491941860.179054
[2025-06-03 20:25:11] 2025-06-04 00:24:55,098 | INFO     | chi2: 3.8682430097531384
[2025-06-03 20:25:11] 2025-06-04 00:24:55,098 | INFO     | sum of square deviations: 14466466879.975033
[2025-06-03 20:25:11] 2025-06-04 00:24:55,102 | INFO     | sum of deviations: 136695026193.0001
[2025-06-03 20:25:11] 2025-06-04 00:24:55,102 | INFO     | mean x: 1748985369.825
[2025-06-03 20:25:11] 2025-06-04 00:24:55,103 | INFO     | mean y: 2086882.7777777778
[2025-06-03 20:25:11] 2025-06-04 00:24:55,103 | INFO     | -- intersect: -16524242795.572472
[2025-06-03 20:25:11] 2025-06-04 00:24:55,103 | INFO     | intersect: -16524242795.572472
[2025-06-03 20:25:11] 2025-06-04 00:24:55,104 | INFO     | chi2: 3.866048116535413
[2025-06-03 20:25:11] 2025-06-04 00:24:55,104 | INFO     | current chi2=3.866048116535413 (change=0.0567413477434408 %)
[2025-06-03 20:25:11] 2025-06-04 00:24:55,104 | INFO     | right removable region: 359
[2025-06-03 20:25:11] 2025-06-04 00:24:55,104 | INFO     | sum of square deviations: 14466395509.975033
[2025-06-03 20:25:11] 2025-06-04 00:24:55,108 | INFO     | sum of deviations: 69916822939.375
[2025-06-03 20:25:11] 2025-06-04 00:24:55,108 | INFO     | mean x: 1748985674.825
[2025-06-03 20:25:11] 2025-06-04 00:24:55,109 | INFO     | mean y: 2106252.625
[2025-06-03 20:25:11] 2025-06-04 00:24:55,109 | INFO     | -- intersect: -8450830186.58161
[2025-06-03 20:25:11] 2025-06-04 00:24:55,109 | INFO     | intersect: -8450830186.58161
[2025-06-03 20:25:11] 2025-06-04 00:24:55,110 | INFO     | chi2: 1.6520197168709851
[2025-06-03 20:25:11] 2025-06-04 00:24:55,110 | INFO     | current chi2=1.6520197168709851 (change=57.29276282007907 %)
[2025-06-03 20:25:11] 2025-06-04 00:24:55,110 | INFO     | sum of square deviations: 13871892864.439526
[2025-06-03 20:25:11] 2025-06-04 00:24:55,114 | INFO     | sum of deviations: 17735904702.24226
[2025-06-03 20:25:11] 2025-06-04 00:24:55,114 | INFO     | mean x: 1748985827.3295774
[2025-06-03 20:25:11] 2025-06-04 00:24:55,114 | INFO     | mean y: 2119629.6816901406
[2025-06-03 20:25:11] 2025-06-04 00:24:55,114 | INFO     | -- intersect: -2234045705.664059
[2025-06-03 20:25:11] 2025-06-04 00:24:55,115 | INFO     | intersect: -2234045705.664059
[2025-06-03 20:25:11] 2025-06-04 00:24:55,115 | INFO     | chi2: 0.5771494868037127
[2025-06-03 20:25:11] 2025-06-04 00:24:55,115 | INFO     | current chi2=0.5771494868037127 (change=65.06400735356446 %)
[2025-06-03 20:25:11] 2025-06-04 00:24:55,116 | INFO     | sum of square deviations: 13293902156.388575
[2025-06-03 20:25:11] 2025-06-04 00:24:55,119 | INFO     | sum of deviations: 4063550910.0228934
[2025-06-03 20:25:11] 2025-06-04 00:24:55,120 | INFO     | mean x: 1748985979.8342857
[2025-06-03 20:25:11] 2025-06-04 00:24:55,120 | INFO     | mean y: 2123211.431428571
[2025-06-03 20:25:11] 2025-06-04 00:24:55,120 | INFO     | -- intersect: -532489837.9475665
[2025-06-03 20:25:11] 2025-06-04 00:24:55,120 | INFO     | intersect: -532489837.9475665
[2025-06-03 20:25:11] 2025-06-04 00:24:55,121 | INFO     | chi2: 0.43697957361387263
[2025-06-03 20:25:11] 2025-06-04 00:24:55,121 | INFO     | current chi2=0.43697957361387263 (change=24.286587165850076 %)
[2025-06-03 20:25:11] 2025-06-04 00:24:55,121 | INFO     | left removable region: 30
[2025-06-03 20:25:11] 2025-06-04 00:24:55,122 | INFO     | sum of square deviations: 11041488713.392159
[2025-06-03 20:25:11] 2025-06-04 00:24:55,125 | INFO     | sum of deviations: 17348807502.94832
[2025-06-03 20:25:11] 2025-06-04 00:24:55,125 | INFO     | mean x: 1748986254.355623
[2025-06-03 20:25:11] 2025-06-04 00:24:55,125 | INFO     | mean y: 2116757.3252279637
[2025-06-03 20:25:11] 2025-06-04 00:24:55,126 | INFO     | -- intersect: -2745957043.2045565
[2025-06-03 20:25:11] 2025-06-04 00:24:55,126 | INFO     | intersect: -2745957043.2045565
[2025-06-03 20:25:11] 2025-06-04 00:24:55,126 | INFO     | chi2: 0.3699957646379126
[2025-06-03 20:25:11] 2025-06-04 00:24:55,127 | INFO     | -- intersect: -2745957043.2045565
[2025-06-03 20:25:11] 2025-06-04 00:24:55,127 | INFO     | current memory leak: 1.57 B/s (using 329 data points, chi2=0.37)
[2025-06-03 20:25:11] 2025-06-04 00:24:55,128 | INFO     | ..............................
[2025-06-03 20:25:11] 2025-06-04 00:24:55,128 | INFO     | . Timing measurements:
[2025-06-03 20:25:11] 2025-06-04 00:24:55,128 | INFO     | . get job = 0 s
[2025-06-03 20:25:11] 2025-06-04 00:24:55,128 | INFO     | . initial setup = 2 s
[2025-06-03 20:25:11] 2025-06-04 00:24:55,128 | INFO     | . payload setup = 8 s
[2025-06-03 20:25:11] 2025-06-04 00:24:55,128 | INFO     | . stage-in = 0 s
[2025-06-03 20:25:11] 2025-06-04 00:24:55,128 | INFO     | . payload execution = 22268 s
[2025-06-03 20:25:11] 2025-06-04 00:24:55,128 | INFO     | . stage-out = 2 s
[2025-06-03 20:25:11] 2025-06-04 00:24:55,128 | INFO     | . log creation = 0 s
[2025-06-03 20:25:11] 2025-06-04 00:24:55,129 | INFO     | ..............................
[2025-06-03 20:25:11] 2025-06-04 00:24:55,242 | INFO     | 
[2025-06-03 20:25:11] 2025-06-04 00:24:55,242 | INFO     | job summary report
[2025-06-03 20:25:11] 2025-06-04 00:24:55,242 | INFO     | --------------------------------------------------
[2025-06-03 20:25:11] 2025-06-04 00:24:55,242 | INFO     | PanDA job id: 6677733447
[2025-06-03 20:25:11] 2025-06-04 00:24:55,243 | INFO     | task id: 45006595
[2025-06-03 20:25:11] 2025-06-04 00:24:55,243 | INFO     | errors: (none)
[2025-06-03 20:25:11] 2025-06-04 00:24:55,243 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 20:25:11] 2025-06-04 00:24:55,243 | INFO     | pilot state: finished 
[2025-06-03 20:25:11] 2025-06-04 00:24:55,243 | INFO     | transexitcode: 0
[2025-06-03 20:25:11] 2025-06-04 00:24:55,243 | INFO     | exeerrorcode: 0
[2025-06-03 20:25:11] 2025-06-04 00:24:55,243 | INFO     | exeerrordiag: 
[2025-06-03 20:25:11] 2025-06-04 00:24:55,243 | INFO     | exitcode: 0
[2025-06-03 20:25:11] 2025-06-04 00:24:55,243 | INFO     | exitmsg: OK
[2025-06-03 20:25:11] 2025-06-04 00:24:55,244 | INFO     | cpuconsumptiontime: 48091 s
[2025-06-03 20:25:11] 2025-06-04 00:24:55,244 | INFO     | nevents: 400
[2025-06-03 20:25:11] 2025-06-04 00:24:55,244 | INFO     | neventsw: 0
[2025-06-03 20:25:11] 2025-06-04 00:24:55,244 | INFO     | pid: 2019989
[2025-06-03 20:25:11] 2025-06-04 00:24:55,244 | INFO     | pgrp: 2019989
[2025-06-03 20:25:11] 2025-06-04 00:24:55,244 | INFO     | corecount: 8
[2025-06-03 20:25:11] 2025-06-04 00:24:55,244 | INFO     | event service: False
[2025-06-03 20:25:11] 2025-06-04 00:24:55,244 | INFO     | sizes: {0: 2405182, 1: 2405182, 6: 2405416, 11: 2405444, 22280: 2438925, 22283: 2447866, 22285: 2448050, 22290: 2448220}
[2025-06-03 20:25:11] 2025-06-04 00:24:55,244 | INFO     | --------------------------------------------------
[2025-06-03 20:25:11] 2025-06-04 00:24:55,244 | INFO     | 
[2025-06-03 20:25:11] 2025-06-04 00:24:55,245 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 20:25:11] 2025-06-04 00:24:55,264 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 20:25:11] 2025-06-04 00:24:55,265 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 20:25:11] 2025-06-04 00:24:55,265 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 20:25:11] 2025-06-04 00:24:55,265 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 20:25:11] 2025-06-04 00:24:55,265 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 20:25:11] 2025-06-04 00:24:55,265 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 20:25:11] 2025-06-04 00:24:55,265 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 20:25:11] 2025-06-04 00:24:55,265 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 20:25:11] 2025-06-04 00:24:55,265 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 20:25:11] 2025-06-04 00:24:55,266 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 20:25:11] 2025-06-04 00:24:55,266 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 20:25:11] 2025-06-04 00:24:55,266 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 20:25:11] 2025-06-04 00:24:55,266 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 20:25:11] 2025-06-04 00:24:55,266 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 20:25:11] 2025-06-04 00:24:55,266 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 20:25:11] 2025-06-04 00:24:55,266 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 20:25:11] 2025-06-04 00:24:55,266 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 20:25:11] 2025-06-04 00:24:55,267 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 20:25:11] 2025-06-04 00:24:55,267 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 20:25:11] 2025-06-04 00:24:55,267 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 20:25:11] 2025-06-04 00:24:55,267 | INFO     | job 6677733447 has completed (purged errors)
[2025-06-03 20:25:11] 2025-06-04 00:24:55,267 | INFO     | overall cleanup function is called
[2025-06-03 20:25:11] 2025-06-04 00:24:56,272 | INFO     | --- collectZombieJob: --- 10, [2019989]
[2025-06-03 20:25:11] 2025-06-04 00:24:56,273 | INFO     | zombie collector waiting for pid 2019989
[2025-06-03 20:25:11] 2025-06-04 00:24:56,273 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 20:25:11] 2025-06-04 00:24:56,273 | INFO     | collected zombie processes
[2025-06-03 20:25:11] 2025-06-04 00:24:56,273 | INFO     | will attempt to kill all subprocesses of pid=2019989
[2025-06-03 20:25:11] 2025-06-04 00:24:56,784 | INFO     | process IDs to be killed: [2019989] (in reverse order)
[2025-06-03 20:25:11] 2025-06-04 00:24:56,932 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 20:25:11] 2025-06-04 00:24:56,933 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 20:25:11] 2025-06-04 00:24:56,950 | INFO     | did not find any defunct processes belonging to 2019989
[2025-06-03 20:25:11] 2025-06-04 00:24:56,967 | INFO     | did not find any defunct processes belonging to 2019989
[2025-06-03 20:25:11] 2025-06-04 00:24:56,967 | INFO     | ready for new job
[2025-06-03 20:25:11] 2025-06-04 00:24:56,968 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 20:25:11] 2025-06-04 00:24:56,970 | INFO     | **************************************
[2025-06-03 20:25:11] 2025-06-04 00:24:56,970 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 20:25:11] 2025-06-04 00:24:56,970 | INFO     | **************************************
[2025-06-03 20:25:11] 2025-06-04 00:24:56,971 | INFO     | 
[2025-06-03 20:25:11] 2025-06-04 00:24:56,986 | INFO     | architecture information:
[2025-06-03 20:25:11] 2025-06-04 00:24:56,986 | INFO     | executing command: cat /etc/os-release
[2025-06-03 20:25:11] 2025-06-04 00:24:57,001 | INFO     | cat /etc/os-release:
[2025-06-03 20:25:11] NAME="CentOS Linux"
[2025-06-03 20:25:11] VERSION="7 (Core)"
[2025-06-03 20:25:11] ID="centos"
[2025-06-03 20:25:11] ID_LIKE="rhel fedora"
[2025-06-03 20:25:11] VERSION_ID="7"
[2025-06-03 20:25:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 20:25:11] ANSI_COLOR="0;31"
[2025-06-03 20:25:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 20:25:11] HOME_URL="https://www.centos.org/"
[2025-06-03 20:25:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 20:25:11] 
[2025-06-03 20:25:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 20:25:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 20:25:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 20:25:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 20:25:11] 
[2025-06-03 20:25:11] 2025-06-04 00:24:57,002 | INFO     | **************************************
[2025-06-03 20:25:11] 2025-06-04 00:24:57,504 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 20:25:11] 2025-06-04 00:24:57,522 | INFO     | sufficient remaining disk space (64591233024 B)
[2025-06-03 20:25:11] 2025-06-04 00:24:57,522 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 20:25:11] 2025-06-04 00:24:57,523 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 20:25:11] 2025-06-04 00:24:57,523 | INFO     | update_server=False
[2025-06-03 20:25:11] 2025-06-04 00:24:57,523 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 20:25:11] 2025-06-04 00:24:57,523 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:25:11] 2025-06-04 00:24:57,523 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 20:25:11] 2025-06-04 00:24:57,524 | INFO     | aborting loop
[2025-06-03 20:25:11] 2025-06-04 00:24:57,658 | INFO     | all job control threads have been joined
[2025-06-03 20:25:11] 2025-06-04 00:24:57,695 | INFO     | all payload control threads have been joined
[2025-06-03 20:25:11] 2025-06-04 00:24:58,237 | INFO     | all data control threads have been joined
[2025-06-03 20:25:11] 2025-06-04 00:24:58,466 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 20:25:11] 2025-06-04 00:24:58,466 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 20:25:11] 2025-06-04 00:24:58,466 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 20:25:11] 2025-06-04 00:24:58,528 | INFO     | [job] retrieve thread has finished
[2025-06-03 20:25:11] 2025-06-04 00:24:58,529 | INFO     | [job] job monitor thread has finished
[2025-06-03 20:25:11] 2025-06-04 00:24:58,604 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 20:25:11] 2025-06-04 00:24:58,663 | INFO     | [job] control thread has finished
[2025-06-03 20:25:11] 2025-06-04 00:24:58,701 | INFO     | [payload] control thread has finished
[2025-06-03 20:25:11] 2025-06-04 00:24:59,153 | INFO     | [data] copytool_in thread has finished
[2025-06-03 20:25:11] 2025-06-04 00:24:59,224 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 20:25:11] 2025-06-04 00:24:59,241 | INFO     | [data] control thread has finished
[2025-06-03 20:25:11] 2025-06-04 00:24:59,278 | INFO     | [payload] failed_post thread has finished
[2025-06-03 20:25:11] 2025-06-04 00:24:59,403 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 20:25:11] 2025-06-04 00:24:59,482 | INFO     | [job] validate thread has finished
[2025-06-03 20:25:11] 2025-06-04 00:24:59,528 | INFO     | [data] copytool_out thread has finished
[2025-06-03 20:25:11] 2025-06-04 00:24:59,555 | INFO     | [payload] validate_post thread has finished
[2025-06-03 20:25:11] 2025-06-04 00:24:59,732 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 20:25:11] 2025-06-04 00:25:00,256 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:25:11] 2025-06-04 00:25:00,712 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 20:25:11] 2025-06-04 00:25:01,261 | INFO     | [job] queue monitor thread has finished
[2025-06-03 20:25:11] 2025-06-04 00:25:04,718 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 20:25:11] 2025-06-04 00:25:06,265 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140703747921728)>', '<ExcThread(monitor, started 140703128614656)>']
[2025-06-03 20:25:11] 2025-06-04 00:25:06,506 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 20:25:11] 2025-06-04 00:25:06,506 | INFO     | [monitor] control thread has ended
[2025-06-03 20:25:11] 2025-06-04 00:25:11,290 | INFO     | all workflow threads have been joined
[2025-06-03 20:25:11] 2025-06-04 00:25:11,291 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 20:25:11] 2025-06-04 00:25:11,291 | INFO     | traces error code: 0
[2025-06-03 20:25:11] 2025-06-04 00:25:11,292 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 20:25:11] 2025-06-04 00:25:11,458 [wrapper] ==== pilot stdout END ====
[2025-06-03 20:25:11] 2025-06-04 00:25:11,461 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 20:25:11] 2025-06-04 00:25:11,464 [wrapper] pilotpid: 1992812
[2025-06-03 20:25:11] 2025-06-04 00:25:11,467 [wrapper] Pilot exit status: 0
[2025-06-03 20:25:11] 2025-06-04 00:25:11,478 [wrapper] pandaids: 6677733447
[2025-06-03 20:25:11] 2025-06-04 00:25:11,561 [wrapper] cleanup supervisor_pilot 1021163 1992814
[2025-06-03 20:25:11] 2025-06-04 00:25:11,565 [wrapper] Test setup, not cleaning
[2025-06-03 20:25:11] 2025-06-04 00:25:11,568 [wrapper] apfmon messages muted
[2025-06-03 20:25:11] 2025-06-04 00:25:11,570 [wrapper] ==== wrapper stdout END ====
[2025-06-03 20:25:11] 2025-06-04 00:25:11,573 [wrapper] ==== wrapper stderr END ====
[2025-06-03 20:25:11]  *** Error codes and diagnostics ***
[2025-06-03 20:25:11]     "exeErrorCode": 0,
[2025-06-03 20:25:11]     "exeErrorDiag": "",
[2025-06-03 20:25:11]     "pilotErrorCode": 0,
[2025-06-03 20:25:11]     "pilotErrorDiag": "",
[2025-06-03 20:25:11]  *** Listing of results directory ***
[2025-06-03 20:25:11] total 388848
[2025-06-03 20:25:11] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 11:35 pilot3.tar.gz
[2025-06-03 20:25:11] -rwx------. 1 boincer umatlas     37140 Jun  3 11:43 runpilot2-wrapper.sh
[2025-06-03 20:25:11] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 11:43 queuedata.json
[2025-06-03 20:25:11] -rw-r--r--. 1 boincer umatlas       100 Jun  3 14:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 20:25:11] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 14:12 run_atlas
[2025-06-03 20:25:11] -rw-r--r--. 1 boincer umatlas       105 Jun  3 14:12 job.xml
[2025-06-03 20:25:11] -rw-r--r--. 2 boincer umatlas 213625456 Jun  3 14:12 EVNT.45006593._001503.pool.root.1
[2025-06-03 20:25:11] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 14:12 shared
[2025-06-03 20:25:11] -rw-r--r--. 2 boincer umatlas    508870 Jun  3 14:12 input.tar.gz
[2025-06-03 20:25:11] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 14:12 start_atlas.sh
[2025-06-03 20:25:11] -rw-r--r--. 1 boincer umatlas         0 Jun  3 14:12 boinc_lockfile
[2025-06-03 20:25:11] -rw-r--r--. 1 boincer umatlas      2524 Jun  3 14:12 pandaJob.out
[2025-06-03 20:25:11] -rw-------. 1 boincer umatlas    985078 Jun  3 14:13 agis_schedconf.cvmfs.json
[2025-06-03 20:25:11] drwx------. 4 boincer umatlas      4096 Jun  3 14:13 pilot3
[2025-06-03 20:25:11] -rw-r--r--. 1 boincer umatlas      6612 Jun  3 20:20 init_data.xml
[2025-06-03 20:25:11] -rw-------. 1 boincer umatlas        95 Jun  3 20:24 pilot_heartbeat.json
[2025-06-03 20:25:11] -rw-r--r--. 1 boincer umatlas       530 Jun  3 20:24 boinc_task_state.xml
[2025-06-03 20:25:11] -rw-------. 1 boincer umatlas 176513455 Jun  3 20:24 HITS.45006595._037435.pool.root.1
[2025-06-03 20:25:11] -rw-------. 1 boincer umatlas      1041 Jun  3 20:24 memory_monitor_summary.json
[2025-06-03 20:25:11] -rw-------. 1 boincer umatlas   1603667 Jun  3 20:24 agis_ddmendpoints.agis.ALL.json
[2025-06-03 20:25:11] -rw-------. 1 boincer umatlas    441073 Jun  3 20:24 log.45006595._037435.job.log.tgz.1
[2025-06-03 20:25:11] -rw-------. 1 boincer umatlas      7714 Jun  3 20:24 heartbeat.json
[2025-06-03 20:25:11] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 20:25 boinc_mmap_file
[2025-06-03 20:25:11] -rw-r--r--. 1 boincer umatlas        27 Jun  3 20:25 wrapper_checkpoint.txt
[2025-06-03 20:25:11] -rw-------. 1 boincer umatlas      4353 Jun  3 20:25 pilotlog.txt
[2025-06-03 20:25:11] -rw-------. 1 boincer umatlas   1660830 Jun  3 20:25 log.45006595._037435.job.log.1
[2025-06-03 20:25:11] -rw-------. 1 boincer umatlas       357 Jun  3 20:25 output.list
[2025-06-03 20:25:11] -rw-r--r--. 1 boincer umatlas       620 Jun  3 20:25 runtime_log
[2025-06-03 20:25:11] -rw-------. 1 boincer umatlas   2119680 Jun  3 20:25 result.tar.gz
[2025-06-03 20:25:11] -rw-r--r--. 1 boincer umatlas      8655 Jun  3 20:25 runtime_log.err
[2025-06-03 20:25:11] -rw-------. 1 boincer umatlas       655 Jun  3 20:25 NjULDmByig7n9Rq4apOajLDm4fhM0noT9bVof3QYDmt6YKDmk9knzm.diag
[2025-06-03 20:25:11] -rw-r--r--. 1 boincer umatlas     20892 Jun  3 20:25 stderr.txt
[2025-06-03 20:25:11] HITS file was successfully produced:
[2025-06-03 20:25:11] -rw-------. 1 boincer umatlas 176513455 Jun  3 20:24 shared/HITS.pool.root.1
[2025-06-03 20:25:11]  *** Contents of shared directory: ***
[2025-06-03 20:25:11] total 383596
[2025-06-03 20:25:11] -rw-r--r--. 2 boincer umatlas 213625456 Jun  3 14:12 ATLAS.root_0
[2025-06-03 20:25:11] -rw-r--r--. 2 boincer umatlas    508870 Jun  3 14:12 input.tar.gz
[2025-06-03 20:25:11] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 14:12 start_atlas.sh
[2025-06-03 20:25:11] -rw-------. 1 boincer umatlas 176513455 Jun  3 20:24 HITS.pool.root.1
[2025-06-03 20:25:11] -rw-------. 1 boincer umatlas   2119680 Jun  3 20:25 result.tar.gz
20:25:13 (1983353): run_atlas exited; CPU time 49171.100190
20:25:13 (1983353): called boinc_finish(0)

</stderr_txt>
]]>

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