Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:05:10 (806221): wrapper (7.7.26015): starting
14:05:10 (806221): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 14:05:10] Arguments: --nthreads 8
[2025-06-03 14:05:10] Threads: 8
[2025-06-03 14:05:10] Checking for CVMFS
[2025-06-03 14:05:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 14:05:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 14:05:11] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 14:05:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 14:05:11] 2.12.6.0 4471 36211 516044 146750 2 197 16808010 32935937 6829 16776704 0 146454962 99.562 177735466 27556 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 14:05:11] CVMFS is ok
[2025-06-03 14:05:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 14:05:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 14:05:11] Further information can be found at the LHC@home message board.
[2025-06-03 14:05:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 14:05:11] Checking for apptainer binary...
[2025-06-03 14:05:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 14:05:11] Running /usr/bin/apptainer --version
[2025-06-03 14:05:11] apptainer version 1.4.1-1.el9
[2025-06-03 14:05:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 14:05:11] c7-11-13.aglt2.org
[2025-06-03 14:05:11] apptainer works
[2025-06-03 14:05:11] Set ATHENA_PROC_NUMBER=8
[2025-06-03 14:05:11] Set ATHENA_CORE_NUMBER=8
[2025-06-03 14:05:11] Starting ATLAS job with PandaID=6677620942
[2025-06-03 14:05:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 16:13:59]  *** The last 200 lines of the pilot log: ***
[2025-06-03 16:13:59]  scope=mc23_13p6TeV
[2025-06-03 16:13:59]  status=None
[2025-06-03 16:13:59]  status_code=0
[2025-06-03 16:13:59]  storage_token=
[2025-06-03 16:13:59]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6677620942/log.45006595._033236.job.log.tgz.1
[2025-06-03 16:13:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b2/ea/log.45006595._033236.job.log.tgz.1
[2025-06-03 16:13:59]  workdir=None
[2025-06-03 16:13:59] ]
[2025-06-03 16:13:59] 2025-06-03 19:30:19,112 | INFO     | transferring file log.45006595._033236.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6677620942/log.45006595._033236.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 16:13:59] 2025-06-03 19:30:19,112 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6677620942/log.45006595._033236.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._033236.job
[2025-06-03 16:13:59] 2025-06-03 19:30:19,160 | INFO     | adding to output.list: log.45006595._033236.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b2/ea/log.45006595._033236.job.log.tg
[2025-06-03 16:13:59] 2025-06-03 19:30:19,161 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 16:13:59] 2025-06-03 19:30:19,161 | INFO     | summary of transferred files:
[2025-06-03 16:13:59] 2025-06-03 19:30:19,161 | INFO     |  -- lfn=log.45006595._033236.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 16:13:59] 2025-06-03 19:30:19,161 | INFO     | stage-out finished correctly
[2025-06-03 16:13:59] 2025-06-03 19:30:20,088 | INFO     | monitor loop #361: job 0:6677620942 is in state 'finished'
[2025-06-03 16:13:59] 2025-06-03 19:30:20,088 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 16:13:59] 2025-06-03 19:30:20,403 | INFO     | PID=809786 has CPU usage=11.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 16:13:59] 2025-06-03 19:30:20,403 | INFO     | .. there are 22 such processes running
[2025-06-03 16:13:59] 2025-06-03 19:30:22,506 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 16:13:59] 2025-06-03 19:30:22,606 | INFO     | monitor loop #362: job 0:6677620942 is in state 'finished'
[2025-06-03 16:13:59] 2025-06-03 19:30:22,606 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 16:13:59] 2025-06-03 19:30:25,003 | INFO     | job 6677620942 has state=finished
[2025-06-03 16:13:59] 2025-06-03 19:30:25,003 | INFO     | preparing for final server update for job 6677620942 in state='finished'
[2025-06-03 16:13:59] 2025-06-03 19:30:25,003 | INFO     | this job has now completed (state=finished)
[2025-06-03 16:13:59] 2025-06-03 19:30:25,004 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 16:13:59] 2025-06-03 19:30:25,004 | INFO     | log transfer has been attempted: DONE
[2025-06-03 16:13:59] 2025-06-03 19:30:25,004 | INFO     | job 6677620942 has finished - writing final server update
[2025-06-03 16:13:59] 2025-06-03 19:30:25,004 | INFO     | total number of processed events: 400 (read)
[2025-06-03 16:13:59] 2025-06-03 19:30:25,032 | INFO     | executing command: lscpu
[2025-06-03 16:13:59] 2025-06-03 19:30:25,117 | INFO     | monitor loop #363: job 0:6677620942 is in state 'finished'
[2025-06-03 16:13:59] 2025-06-03 19:30:25,117 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 16:13:59] 2025-06-03 19:30:25,165 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 16:13:59] 2025-06-03 19:30:27,622 | INFO     | monitor loop #364: job 0:6677620942 is in state 'finished'
[2025-06-03 16:13:59] 2025-06-03 19:30:27,622 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 16:13:59] 2025-06-03 19:30:30,127 | INFO     | monitor loop #365: job 0:6677620942 is in state 'finished'
[2025-06-03 16:13:59] 2025-06-03 19:30:30,127 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 16:13:59] 2025-06-03 19:30:32,636 | INFO     | monitor loop #366: job 0:6677620942 is in state 'finished'
[2025-06-03 16:13:59] 2025-06-03 19:30:32,636 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 16:13:59] 2025-06-03 19:30:33,361 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 16:13:59] 2025-06-03 19:30:33,361 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677620942/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 16:13:59] 2025-06-03 19:30:33,362 | INFO     | extracted standard info from prmon json
[2025-06-03 16:13:59] 2025-06-03 19:30:33,362 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 16:13:59] 2025-06-03 19:30:33,362 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 16:13:59] 2025-06-03 19:30:33,362 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 16:13:59] 2025-06-03 19:30:33,362 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 16:13:59] 2025-06-03 19:30:33,364 | INFO     | fitting pss+swap vs Time
[2025-06-03 16:13:59] 2025-06-03 19:30:33,364 | INFO     | sum of square deviations: 141539398.0
[2025-06-03 16:13:59] 2025-06-03 19:30:33,371 | INFO     | sum of deviations: 9004447777.999998
[2025-06-03 16:13:59] 2025-06-03 19:30:33,371 | INFO     | mean x: 1748976571.0
[2025-06-03 16:13:59] 2025-06-03 19:30:33,371 | INFO     | mean y: 2120870.25974026
[2025-06-03 16:13:59] 2025-06-03 19:30:33,371 | INFO     | -- intersect: -111264200882.1827
[2025-06-03 16:13:59] 2025-06-03 19:30:33,371 | INFO     | intersect: -111264200882.1827
[2025-06-03 16:13:59] 2025-06-03 19:30:33,371 | INFO     | chi2: 0.9744186663077915
[2025-06-03 16:13:59] 2025-06-03 19:30:33,371 | INFO     | -- intersect: -111264200882.1827
[2025-06-03 16:13:59] 2025-06-03 19:30:33,371 | INFO     | current memory leak: 63.62 B/s (using 77 data points, chi2=0.97)
[2025-06-03 16:13:59] 2025-06-03 19:30:33,372 | INFO     | ..............................
[2025-06-03 16:13:59] 2025-06-03 19:30:33,372 | INFO     | . Timing measurements:
[2025-06-03 16:13:59] 2025-06-03 19:30:33,372 | INFO     | . get job = 0 s
[2025-06-03 16:13:59] 2025-06-03 19:30:33,372 | INFO     | . initial setup = 2 s
[2025-06-03 16:13:59] 2025-06-03 19:30:33,372 | INFO     | . payload setup = 6 s
[2025-06-03 16:13:59] 2025-06-03 19:30:33,372 | INFO     | . stage-in = 0 s
[2025-06-03 16:13:59] 2025-06-03 19:30:33,372 | INFO     | . payload execution = 5068 s
[2025-06-03 16:13:59] 2025-06-03 19:30:33,372 | INFO     | . stage-out = 2 s
[2025-06-03 16:13:59] 2025-06-03 19:30:33,372 | INFO     | . log creation = 0 s
[2025-06-03 16:13:59] 2025-06-03 19:30:33,372 | INFO     | ..............................
[2025-06-03 16:13:59] 2025-06-03 19:30:33,730 | INFO     | 
[2025-06-03 16:13:59] 2025-06-03 19:30:33,730 | INFO     | job summary report
[2025-06-03 16:13:59] 2025-06-03 19:30:33,730 | INFO     | --------------------------------------------------
[2025-06-03 16:13:59] 2025-06-03 19:30:33,730 | INFO     | PanDA job id: 6677620942
[2025-06-03 16:13:59] 2025-06-03 19:30:33,730 | INFO     | task id: 45006595
[2025-06-03 16:13:59] 2025-06-03 19:30:33,730 | INFO     | errors: (none)
[2025-06-03 16:13:59] 2025-06-03 19:30:33,730 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 16:13:59] 2025-06-03 19:30:33,730 | INFO     | pilot state: finished 
[2025-06-03 16:13:59] 2025-06-03 19:30:33,730 | INFO     | transexitcode: 0
[2025-06-03 16:13:59] 2025-06-03 19:30:33,730 | INFO     | exeerrorcode: 0
[2025-06-03 16:13:59] 2025-06-03 19:30:33,731 | INFO     | exeerrordiag: 
[2025-06-03 16:13:59] 2025-06-03 19:30:33,731 | INFO     | exitcode: 0
[2025-06-03 16:13:59] 2025-06-03 19:30:33,731 | INFO     | exitmsg: OK
[2025-06-03 16:13:59] 2025-06-03 19:30:33,731 | INFO     | cpuconsumptiontime: 29171 s
[2025-06-03 16:13:59] 2025-06-03 19:30:33,731 | INFO     | nevents: 400
[2025-06-03 16:13:59] 2025-06-03 19:30:33,731 | INFO     | neventsw: 0
[2025-06-03 16:13:59] 2025-06-03 19:30:33,731 | INFO     | pid: 816327
[2025-06-03 16:13:59] 2025-06-03 19:30:33,731 | INFO     | pgrp: 816327
[2025-06-03 16:13:59] 2025-06-03 19:30:33,731 | INFO     | corecount: 8
[2025-06-03 16:13:59] 2025-06-03 19:30:33,731 | INFO     | event service: False
[2025-06-03 16:13:59] 2025-06-03 19:30:33,731 | INFO     | sizes: {0: 2405184, 1: 2405184, 5: 2405418, 11: 2405474, 5078: 2431816, 5079: 2431815, 5083: 2440968, 5086: 2441024, 5097: 2441194}
[2025-06-03 16:13:59] 2025-06-03 19:30:33,731 | INFO     | --------------------------------------------------
[2025-06-03 16:13:59] 2025-06-03 19:30:33,731 | INFO     | 
[2025-06-03 16:13:59] 2025-06-03 19:30:33,732 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-03 16:13:59] 2025-06-03 19:30:33,752 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 16:13:59] 2025-06-03 19:30:33,752 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 16:13:59] 2025-06-03 19:30:33,753 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 16:13:59] 2025-06-03 19:30:33,753 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 16:13:59] 2025-06-03 19:30:33,753 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 16:13:59] 2025-06-03 19:30:33,753 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 16:13:59] 2025-06-03 19:30:33,753 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 16:13:59] 2025-06-03 19:30:33,753 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 16:13:59] 2025-06-03 19:30:33,753 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 16:13:59] 2025-06-03 19:30:33,753 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 16:13:59] 2025-06-03 19:30:33,753 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 16:13:59] 2025-06-03 19:30:33,753 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 16:13:59] 2025-06-03 19:30:33,753 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 16:13:59] 2025-06-03 19:30:33,753 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 16:13:59] 2025-06-03 19:30:33,753 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 16:13:59] 2025-06-03 19:30:33,753 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 16:13:59] 2025-06-03 19:30:33,753 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 16:13:59] 2025-06-03 19:30:33,753 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 16:13:59] 2025-06-03 19:30:33,754 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 16:13:59] 2025-06-03 19:30:33,754 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 16:13:59] 2025-06-03 19:30:33,754 | INFO     | job 6677620942 has completed (purged errors)
[2025-06-03 16:13:59] 2025-06-03 19:30:33,754 | INFO     | overall cleanup function is called
[2025-06-03 16:13:59] 2025-06-03 19:30:34,762 | INFO     | --- collectZombieJob: --- 10, [816327]
[2025-06-03 16:13:59] 2025-06-03 19:30:34,762 | INFO     | zombie collector waiting for pid 816327
[2025-06-03 16:13:59] 2025-06-03 19:30:34,762 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 16:13:59] 2025-06-03 19:30:34,762 | INFO     | collected zombie processes
[2025-06-03 16:13:59] 2025-06-03 19:30:34,762 | INFO     | will attempt to kill all subprocesses of pid=816327
[2025-06-03 16:13:59] 2025-06-03 19:30:35,845 | INFO     | process IDs to be killed: [816327] (in reverse order)
[2025-06-03 16:13:59] 2025-06-03 19:30:36,007 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 16:13:59] 2025-06-03 19:30:36,007 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 16:13:59] 2025-06-03 19:30:36,071 | INFO     | did not find any defunct processes belonging to 816327
[2025-06-03 16:13:59] 2025-06-03 19:30:36,141 | INFO     | did not find any defunct processes belonging to 816327
[2025-06-03 16:13:59] 2025-06-03 19:30:36,141 | INFO     | ready for new job
[2025-06-03 16:13:59] 2025-06-03 19:30:36,154 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 16:13:59] 2025-06-03 19:30:36,155 | INFO     | **************************************
[2025-06-03 16:13:59] 2025-06-03 19:30:36,156 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 16:13:59] 2025-06-03 19:30:36,156 | INFO     | **************************************
[2025-06-03 16:13:59] 2025-06-03 19:30:36,156 | INFO     | 
[2025-06-03 16:13:59] 2025-06-03 19:30:36,192 | INFO     | architecture information:
[2025-06-03 16:13:59] 2025-06-03 19:30:36,193 | INFO     | executing command: cat /etc/os-release
[2025-06-03 16:13:59] 2025-06-03 19:30:36,241 | INFO     | cat /etc/os-release:
[2025-06-03 16:13:59] NAME="CentOS Linux"
[2025-06-03 16:13:59] VERSION="7 (Core)"
[2025-06-03 16:13:59] ID="centos"
[2025-06-03 16:13:59] ID_LIKE="rhel fedora"
[2025-06-03 16:13:59] VERSION_ID="7"
[2025-06-03 16:13:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 16:13:59] ANSI_COLOR="0;31"
[2025-06-03 16:13:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 16:13:59] HOME_URL="https://www.centos.org/"
[2025-06-03 16:13:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 16:13:59] 
[2025-06-03 16:13:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 16:13:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 16:13:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 16:13:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 16:13:59] 
[2025-06-03 16:13:59] 2025-06-03 19:30:36,241 | INFO     | **************************************
[2025-06-03 16:13:59] 2025-06-03 19:30:36,747 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-03 16:13:59] 2025-06-03 19:30:36,769 | INFO     | sufficient remaining disk space (93379887104 B)
[2025-06-03 16:13:59] 2025-06-03 19:30:36,770 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 16:13:59] 2025-06-03 19:30:36,770 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 16:13:59] 2025-06-03 19:30:36,770 | INFO     | update_server=False
[2025-06-03 16:13:59] 2025-06-03 19:30:36,770 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 16:13:59] 2025-06-03 19:30:36,771 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 16:13:59] 2025-06-03 19:30:36,771 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 16:13:59] 2025-06-03 19:30:36,771 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 16:13:59] 2025-06-03 19:30:36,771 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 16:13:59] 2025-06-03 19:30:36,771 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 16:13:59] 2025-06-03 19:30:36,771 | INFO     | aborting loop
[2025-06-03 16:13:59] 2025-06-03 19:30:37,021 | INFO     | all data control threads have been joined
[2025-06-03 16:13:59] 2025-06-03 19:30:37,130 | INFO     | all job control threads have been joined
[2025-06-03 16:13:59] 2025-06-03 19:30:37,458 | INFO     | all payload control threads have been joined
[2025-06-03 16:13:59] 2025-06-03 19:30:37,728 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 16:13:59] 2025-06-03 19:30:37,764 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 16:13:59] 2025-06-03 19:30:37,781 | INFO     | [job] retrieve thread has finished
[2025-06-03 16:13:59] 2025-06-03 19:30:37,781 | INFO     | [job] job monitor thread has finished
[2025-06-03 16:13:59] 2025-06-03 19:30:37,839 | INFO     | [payload] failed_post thread has finished
[2025-06-03 16:13:59] 2025-06-03 19:30:37,977 | INFO     | [payload] validate_post thread has finished
[2025-06-03 16:13:59] 2025-06-03 19:30:38,038 | INFO     | [data] control thread has finished
[2025-06-03 16:13:59] 2025-06-03 19:30:38,112 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 16:13:59] 2025-06-03 19:30:38,136 | INFO     | [job] control thread has finished
[2025-06-03 16:13:59] 2025-06-03 19:30:38,270 | INFO     | [job] validate thread has finished
[2025-06-03 16:13:59] 2025-06-03 19:30:38,464 | INFO     | [payload] control thread has finished
[2025-06-03 16:13:59] 2025-06-03 19:30:38,502 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 16:13:59] 2025-06-03 19:30:38,597 | INFO     | [data] copytool_in thread has finished
[2025-06-03 16:13:59] 2025-06-03 19:30:38,745 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 16:13:59] 2025-06-03 19:30:39,139 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 16:13:59] 2025-06-03 19:30:39,751 | INFO     | [job] queue monitor thread has finished
[2025-06-03 16:13:59] 2025-06-03 19:30:39,771 | INFO     | [data] copytool_out thread has finished
[2025-06-03 16:13:59] 2025-06-03 19:30:41,738 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 16:13:59] 2025-06-03 19:30:46,857 | INFO     | job.realtimelogging is not enabled
[2025-06-03 16:13:59] 2025-06-03 19:30:47,862 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 16:13:59] 2025-06-03 19:30:49,225 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139762684573504)>', '<ExcThread(monitor, started 139762044229376)>']
[2025-06-03 16:13:59] 2025-06-03 19:30:49,858 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 16:13:59] 2025-06-03 19:30:49,858 | INFO     | [monitor] control thread has ended
[2025-06-03 16:13:59] 2025-06-03 19:30:54,252 | INFO     | all workflow threads have been joined
[2025-06-03 16:13:59] 2025-06-03 19:30:54,252 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 16:13:59] 2025-06-03 19:30:54,252 | INFO     | traces error code: 0
[2025-06-03 16:13:59] 2025-06-03 19:30:54,252 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 16:13:59] 2025-06-03 19:30:54,653 [wrapper] ==== pilot stdout END ====
[2025-06-03 16:13:59] 2025-06-03 19:30:54,677 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 16:13:59] 2025-06-03 19:30:54,679 [wrapper] pilotpid: 809786
[2025-06-03 16:13:59] 2025-06-03 19:30:54,730 [wrapper] Pilot exit status: 0
[2025-06-03 16:13:59] 2025-06-03 19:30:54,788 [wrapper] pandaids: 6677620942
[2025-06-03 16:13:59] 2025-06-03 19:30:54,915 [wrapper] cleanup supervisor_pilot 1444678 809787
[2025-06-03 16:13:59] 2025-06-03 19:30:54,918 [wrapper] Test setup, not cleaning
[2025-06-03 16:13:59] 2025-06-03 19:30:54,921 [wrapper] apfmon messages muted
[2025-06-03 16:13:59] 2025-06-03 19:30:54,923 [wrapper] ==== wrapper stdout END ====
[2025-06-03 16:13:59] 2025-06-03 19:30:54,925 [wrapper] ==== wrapper stderr END ====
[2025-06-03 16:13:59]  *** Error codes and diagnostics ***
[2025-06-03 16:13:59]     "exeErrorCode": 0,
[2025-06-03 16:13:59]     "exeErrorDiag": "",
[2025-06-03 16:13:59]     "pilotErrorCode": 0,
[2025-06-03 16:13:59]     "pilotErrorDiag": "",
[2025-06-03 16:13:59]  *** Listing of results directory ***
[2025-06-03 16:13:59] total 390668
[2025-06-03 16:13:59] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 08:59 pilot3.tar.gz
[2025-06-03 16:13:59] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 09:05 queuedata.json
[2025-06-03 16:13:59] -rwx------. 1 boincer umatlas     37140 Jun  3 09:05 runpilot2-wrapper.sh
[2025-06-03 16:13:59] -rw-r--r--. 1 boincer umatlas       100 Jun  3 14:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 16:13:59] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 14:05 run_atlas
[2025-06-03 16:13:59] -rw-r--r--. 1 boincer umatlas       105 Jun  3 14:05 job.xml
[2025-06-03 16:13:59] -rw-r--r--. 2 boincer umatlas 214232852 Jun  3 14:05 EVNT.45006593._001337.pool.root.1
[2025-06-03 16:13:59] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 14:05 start_atlas.sh
[2025-06-03 16:13:59] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 14:05 shared
[2025-06-03 16:13:59] -rw-r--r--. 2 boincer umatlas    508883 Jun  3 14:05 input.tar.gz
[2025-06-03 16:13:59] -rw-r--r--. 1 boincer umatlas         0 Jun  3 14:05 boinc_lockfile
[2025-06-03 16:13:59] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 14:05 pandaJob.out
[2025-06-03 16:13:59] -rw-------. 1 boincer umatlas    985078 Jun  3 14:05 agis_schedconf.cvmfs.json
[2025-06-03 16:13:59] -rw-------. 1 boincer umatlas   1603667 Jun  3 14:05 agis_ddmendpoints.agis.ALL.json
[2025-06-03 16:13:59] drwx------. 4 boincer umatlas      4096 Jun  3 14:05 pilot3
[2025-06-03 16:13:59] -rw-------. 1 boincer umatlas 180359595 Jun  3 15:29 HITS.45006595._033236.pool.root.1
[2025-06-03 16:13:59] -rw-r--r--. 1 boincer umatlas       529 Jun  3 15:29 boinc_task_state.xml
[2025-06-03 16:13:59] -rw-------. 1 boincer umatlas        95 Jun  3 15:29 pilot_heartbeat.json
[2025-06-03 16:13:59] -rw-------. 1 boincer umatlas      1044 Jun  3 15:30 memory_monitor_summary.json
[2025-06-03 16:13:59] -rw-------. 1 boincer umatlas    317241 Jun  3 15:30 log.45006595._033236.job.log.tgz.1
[2025-06-03 16:13:59] -rw-------. 1 boincer umatlas      7693 Jun  3 15:30 heartbeat.json
[2025-06-03 16:13:59] -rw-------. 1 boincer umatlas      4548 Jun  3 15:30 pilotlog.txt
[2025-06-03 16:13:59] -rw-------. 1 boincer umatlas    489791 Jun  3 15:30 log.45006595._033236.job.log.1
[2025-06-03 16:13:59] -rw-------. 1 boincer umatlas       357 Jun  3 15:30 output.list
[2025-06-03 16:13:59] -rw-r--r--. 1 boincer umatlas       620 Jun  3 15:30 runtime_log
[2025-06-03 16:13:59] -rw-------. 1 boincer umatlas    829440 Jun  3 15:30 result.tar.gz
[2025-06-03 16:13:59] -rw-r--r--. 1 boincer umatlas      8659 Jun  3 15:30 runtime_log.err
[2025-06-03 16:13:59] -rw-------. 1 boincer umatlas       652 Jun  3 15:30 iQqLDmbVgg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0EkKDmZtEmhm.diag
[2025-06-03 16:13:59] -rw-r--r--. 1 boincer umatlas      6897 Jun  3 16:13 init_data.xml
[2025-06-03 16:13:59] -rw-r--r--. 1 boincer umatlas        27 Jun  3 16:13 wrapper_checkpoint.txt
[2025-06-03 16:13:59] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 16:13 boinc_mmap_file
[2025-06-03 16:13:59] -rw-r--r--. 1 boincer umatlas     21995 Jun  3 16:13 stderr.txt
[2025-06-03 16:13:59] HITS file was successfully produced:
[2025-06-03 16:13:59] -rw-------. 1 boincer umatlas 180359595 Jun  3 15:29 shared/HITS.pool.root.1
[2025-06-03 16:13:59]  *** Contents of shared directory: ***
[2025-06-03 16:13:59] total 386680
[2025-06-03 16:13:59] -rw-r--r--. 2 boincer umatlas 214232852 Jun  3 14:05 ATLAS.root_0
[2025-06-03 16:13:59] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 14:05 start_atlas.sh
[2025-06-03 16:13:59] -rw-r--r--. 2 boincer umatlas    508883 Jun  3 14:05 input.tar.gz
[2025-06-03 16:13:59] -rw-------. 1 boincer umatlas 180359595 Jun  3 15:29 HITS.pool.root.1
[2025-06-03 16:13:59] -rw-------. 1 boincer umatlas    829440 Jun  3 15:30 result.tar.gz
16:14:01 (806221): run_atlas exited; CPU time 29249.859564
16:14:01 (806221): called boinc_finish(0)

</stderr_txt>
]]>

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