Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:00:28 (737246): wrapper (7.7.26015): starting
14:00:28 (737246): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 14:00:28] Arguments: --nthreads 8
[2025-06-03 14:00:28] Threads: 8
[2025-06-03 14:00:28] Checking for CVMFS
[2025-06-03 14:00:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 14:00:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 14:00:29] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 14:00:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 14:00:29] 2.12.6.0 9880 229 74476 146750 3 187 18918440 32935936 3563 16776704 0 1289102 99.998 76681 40443 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 14:00:29] CVMFS is ok
[2025-06-03 14:00:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 14:00:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 14:00:29] Further information can be found at the LHC@home message board.
[2025-06-03 14:00:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 14:00:29] Checking for apptainer binary...
[2025-06-03 14:00:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 14:00:29] Running /usr/bin/apptainer --version
[2025-06-03 14:00:29] apptainer version 1.4.1-1.el9
[2025-06-03 14:00:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 14:00:29] c-8-39.aglt2.org
[2025-06-03 14:00:29] apptainer works
[2025-06-03 14:00:29] Set ATHENA_PROC_NUMBER=8
[2025-06-03 14:00:29] Set ATHENA_CORE_NUMBER=8
[2025-06-03 14:00:29] Starting ATLAS job with PandaID=6677733570
[2025-06-03 14:00:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 15:33:09]  *** The last 200 lines of the pilot log: ***
[2025-06-03 15:33:09]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 15:33:09]  is_altstaged=None
[2025-06-03 15:33:09]  is_tar=False
[2025-06-03 15:33:09]  lfn=log.45006595._037558.job.log.tgz.1
[2025-06-03 15:33:09]  mtime=0
[2025-06-03 15:33:09]  protocol_id=None
[2025-06-03 15:33:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 15:33:09]  replicas=None
[2025-06-03 15:33:09]  scope=mc23_13p6TeV
[2025-06-03 15:33:09]  status=None
[2025-06-03 15:33:09]  status_code=0
[2025-06-03 15:33:09]  storage_token=
[2025-06-03 15:33:09]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6677733570/log.45006595._037558.job.log.tgz.1
[2025-06-03 15:33:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d3/25/log.45006595._037558.job.log.tgz.1
[2025-06-03 15:33:09]  workdir=None
[2025-06-03 15:33:09] ]
[2025-06-03 15:33:09] 2025-06-03 19:32:53,878 | INFO     | transferring file log.45006595._037558.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6677733570/log.45006595._037558.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 15:33:09] 2025-06-03 19:32:53,878 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6677733570/log.45006595._037558.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._037558.job
[2025-06-03 15:33:09] 2025-06-03 19:32:53,888 | INFO     | adding to output.list: log.45006595._037558.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d3/25/log.45006595._037558.job.log.tg
[2025-06-03 15:33:09] 2025-06-03 19:32:53,889 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 15:33:09] 2025-06-03 19:32:53,889 | INFO     | summary of transferred files:
[2025-06-03 15:33:09] 2025-06-03 19:32:53,889 | INFO     |  -- lfn=log.45006595._037558.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 15:33:09] 2025-06-03 19:32:53,889 | INFO     | stage-out finished correctly
[2025-06-03 15:33:09] 2025-06-03 19:32:53,937 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 15:33:09] 2025-06-03 19:32:54,189 | INFO     | job 6677733570 has state=finished
[2025-06-03 15:33:09] 2025-06-03 19:32:54,189 | INFO     | preparing for final server update for job 6677733570 in state='finished'
[2025-06-03 15:33:09] 2025-06-03 19:32:54,190 | INFO     | this job has now completed (state=finished)
[2025-06-03 15:33:09] 2025-06-03 19:32:54,190 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 15:33:09] 2025-06-03 19:32:54,190 | INFO     | log transfer has been attempted: DONE
[2025-06-03 15:33:09] 2025-06-03 19:32:54,190 | INFO     | job 6677733570 has finished - writing final server update
[2025-06-03 15:33:09] 2025-06-03 19:32:54,190 | INFO     | total number of processed events: 400 (read)
[2025-06-03 15:33:09] 2025-06-03 19:32:54,204 | INFO     | executing command: lscpu
[2025-06-03 15:33:09] 2025-06-03 19:32:54,254 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 15:33:09] 2025-06-03 19:32:55,993 | WARNING  | process 747309 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 15:33:09] 2025-06-03 19:32:55,994 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677733570/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 15:33:09] 2025-06-03 19:32:56,154 | INFO     | number of running child processes to parent process 747309: 1
[2025-06-03 15:33:09] 2025-06-03 19:32:56,154 | INFO     | maximum number of monitored processes: 6
[2025-06-03 15:33:09] 2025-06-03 19:32:56,670 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 15:33:09] 2025-06-03 19:32:56,670 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677733570/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 15:33:09] 2025-06-03 19:32:56,671 | INFO     | extracted standard info from prmon json
[2025-06-03 15:33:09] 2025-06-03 19:32:56,671 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 15:33:09] 2025-06-03 19:32:56,671 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 15:33:09] 2025-06-03 19:32:56,671 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 15:33:09] 2025-06-03 19:32:56,671 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 15:33:09] 2025-06-03 19:32:56,673 | INFO     | fitting pss+swap vs Time
[2025-06-03 15:33:09] 2025-06-03 19:32:56,673 | INFO     | sum of square deviations: 183761585.0
[2025-06-03 15:33:09] 2025-06-03 19:32:56,673 | INFO     | sum of deviations: 13801177959.000002
[2025-06-03 15:33:09] 2025-06-03 19:32:56,673 | INFO     | mean x: 1748976493.5
[2025-06-03 15:33:09] 2025-06-03 19:32:56,673 | INFO     | mean y: 2099718.095238095
[2025-06-03 15:33:09] 2025-06-03 19:32:56,673 | INFO     | -- intersect: -131352534782.37071
[2025-06-03 15:33:09] 2025-06-03 19:32:56,673 | INFO     | intersect: -131352534782.37071
[2025-06-03 15:33:09] 2025-06-03 19:32:56,673 | INFO     | chi2: 0.9084720710444587
[2025-06-03 15:33:09] 2025-06-03 19:32:56,673 | INFO     | -- intersect: -131352534782.37071
[2025-06-03 15:33:09] 2025-06-03 19:32:56,674 | INFO     | current memory leak: 75.10 B/s (using 84 data points, chi2=0.91)
[2025-06-03 15:33:09] 2025-06-03 19:32:56,674 | INFO     | ..............................
[2025-06-03 15:33:09] 2025-06-03 19:32:56,674 | INFO     | . Timing measurements:
[2025-06-03 15:33:09] 2025-06-03 19:32:56,674 | INFO     | . get job = 0 s
[2025-06-03 15:33:09] 2025-06-03 19:32:56,674 | INFO     | . initial setup = 2 s
[2025-06-03 15:33:09] 2025-06-03 19:32:56,674 | INFO     | . payload setup = 4 s
[2025-06-03 15:33:09] 2025-06-03 19:32:56,674 | INFO     | . stage-in = 0 s
[2025-06-03 15:33:09] 2025-06-03 19:32:56,674 | INFO     | . payload execution = 5513 s
[2025-06-03 15:33:09] 2025-06-03 19:32:56,674 | INFO     | . stage-out = 0 s
[2025-06-03 15:33:09] 2025-06-03 19:32:56,674 | INFO     | . log creation = 0 s
[2025-06-03 15:33:09] 2025-06-03 19:32:56,674 | INFO     | ..............................
[2025-06-03 15:33:09] 2025-06-03 19:32:56,726 | INFO     | 
[2025-06-03 15:33:09] 2025-06-03 19:32:56,726 | INFO     | job summary report
[2025-06-03 15:33:09] 2025-06-03 19:32:56,726 | INFO     | --------------------------------------------------
[2025-06-03 15:33:09] 2025-06-03 19:32:56,726 | INFO     | PanDA job id: 6677733570
[2025-06-03 15:33:09] 2025-06-03 19:32:56,726 | INFO     | task id: 45006595
[2025-06-03 15:33:09] 2025-06-03 19:32:56,726 | INFO     | errors: (none)
[2025-06-03 15:33:09] 2025-06-03 19:32:56,726 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 15:33:09] 2025-06-03 19:32:56,726 | INFO     | pilot state: finished 
[2025-06-03 15:33:09] 2025-06-03 19:32:56,726 | INFO     | transexitcode: 0
[2025-06-03 15:33:09] 2025-06-03 19:32:56,726 | INFO     | exeerrorcode: 0
[2025-06-03 15:33:09] 2025-06-03 19:32:56,726 | INFO     | exeerrordiag: 
[2025-06-03 15:33:09] 2025-06-03 19:32:56,726 | INFO     | exitcode: 0
[2025-06-03 15:33:09] 2025-06-03 19:32:56,727 | INFO     | exitmsg: OK
[2025-06-03 15:33:09] 2025-06-03 19:32:56,727 | INFO     | cpuconsumptiontime: 38413 s
[2025-06-03 15:33:09] 2025-06-03 19:32:56,727 | INFO     | nevents: 400
[2025-06-03 15:33:09] 2025-06-03 19:32:56,727 | INFO     | neventsw: 0
[2025-06-03 15:33:09] 2025-06-03 19:32:56,727 | INFO     | pid: 747309
[2025-06-03 15:33:09] 2025-06-03 19:32:56,727 | INFO     | pgrp: 747309
[2025-06-03 15:33:09] 2025-06-03 19:32:56,727 | INFO     | corecount: 8
[2025-06-03 15:33:09] 2025-06-03 19:32:56,727 | INFO     | event service: False
[2025-06-03 15:33:09] 2025-06-03 19:32:56,727 | INFO     | sizes: {0: 2405013, 1: 2405212, 3: 2405418, 11: 2405446, 5521: 2431935, 5522: 2431934, 5524: 2441115, 5527: 2441229}
[2025-06-03 15:33:09] 2025-06-03 19:32:56,727 | INFO     | --------------------------------------------------
[2025-06-03 15:33:09] 2025-06-03 19:32:56,727 | INFO     | 
[2025-06-03 15:33:09] 2025-06-03 19:32:56,727 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-03 15:33:09] 2025-06-03 19:32:56,738 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 15:33:09] 2025-06-03 19:32:56,738 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 15:33:09] 2025-06-03 19:32:56,738 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 15:33:09] 2025-06-03 19:32:56,738 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 15:33:09] 2025-06-03 19:32:56,738 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 15:33:09] 2025-06-03 19:32:56,738 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 15:33:09] 2025-06-03 19:32:56,738 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 15:33:09] 2025-06-03 19:32:56,738 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 15:33:09] 2025-06-03 19:32:56,738 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 15:33:09] 2025-06-03 19:32:56,738 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 15:33:09] 2025-06-03 19:32:56,738 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 15:33:09] 2025-06-03 19:32:56,738 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 15:33:09] 2025-06-03 19:32:56,738 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 15:33:09] 2025-06-03 19:32:56,739 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 15:33:09] 2025-06-03 19:32:56,739 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 15:33:09] 2025-06-03 19:32:56,739 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 15:33:09] 2025-06-03 19:32:56,739 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 15:33:09] 2025-06-03 19:32:56,739 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 15:33:09] 2025-06-03 19:32:56,739 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 15:33:09] 2025-06-03 19:32:56,739 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 15:33:09] 2025-06-03 19:32:56,739 | INFO     | job 6677733570 has completed (purged errors)
[2025-06-03 15:33:09] 2025-06-03 19:32:56,739 | INFO     | overall cleanup function is called
[2025-06-03 15:33:09] 2025-06-03 19:32:57,746 | INFO     | --- collectZombieJob: --- 10, [747309]
[2025-06-03 15:33:09] 2025-06-03 19:32:57,759 | INFO     | zombie collector waiting for pid 747309
[2025-06-03 15:33:09] 2025-06-03 19:32:57,759 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 15:33:09] 2025-06-03 19:32:57,759 | INFO     | collected zombie processes
[2025-06-03 15:33:09] 2025-06-03 19:32:57,759 | INFO     | will attempt to kill all subprocesses of pid=747309
[2025-06-03 15:33:09] 2025-06-03 19:32:57,912 | INFO     | process IDs to be killed: [747309] (in reverse order)
[2025-06-03 15:33:09] 2025-06-03 19:32:57,955 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 15:33:09] 2025-06-03 19:32:57,956 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 15:33:09] 2025-06-03 19:32:57,959 | INFO     | did not find any defunct processes belonging to 747309
[2025-06-03 15:33:09] 2025-06-03 19:32:57,963 | INFO     | did not find any defunct processes belonging to 747309
[2025-06-03 15:33:09] 2025-06-03 19:32:57,963 | INFO     | ready for new job
[2025-06-03 15:33:09] 2025-06-03 19:32:57,963 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 15:33:09] 2025-06-03 19:32:57,964 | INFO     | **************************************
[2025-06-03 15:33:09] 2025-06-03 19:32:57,964 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 15:33:09] 2025-06-03 19:32:57,964 | INFO     | **************************************
[2025-06-03 15:33:09] 2025-06-03 19:32:57,964 | INFO     | 
[2025-06-03 15:33:09] 2025-06-03 19:32:57,977 | INFO     | architecture information:
[2025-06-03 15:33:09] 2025-06-03 19:32:57,977 | INFO     | executing command: cat /etc/os-release
[2025-06-03 15:33:09] 2025-06-03 19:32:57,986 | INFO     | cat /etc/os-release:
[2025-06-03 15:33:09] NAME="CentOS Linux"
[2025-06-03 15:33:09] VERSION="7 (Core)"
[2025-06-03 15:33:09] ID="centos"
[2025-06-03 15:33:09] ID_LIKE="rhel fedora"
[2025-06-03 15:33:09] VERSION_ID="7"
[2025-06-03 15:33:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 15:33:09] ANSI_COLOR="0;31"
[2025-06-03 15:33:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 15:33:09] HOME_URL="https://www.centos.org/"
[2025-06-03 15:33:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 15:33:09] 
[2025-06-03 15:33:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 15:33:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 15:33:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 15:33:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 15:33:09] 
[2025-06-03 15:33:09] 2025-06-03 19:32:57,986 | INFO     | **************************************
[2025-06-03 15:33:09] 2025-06-03 19:32:58,489 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-03 15:33:09] 2025-06-03 19:32:58,499 | INFO     | sufficient remaining disk space (74153197568 B)
[2025-06-03 15:33:09] 2025-06-03 19:32:58,499 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 15:33:09] 2025-06-03 19:32:58,499 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 15:33:09] 2025-06-03 19:32:58,499 | INFO     | update_server=False
[2025-06-03 15:33:09] 2025-06-03 19:32:58,499 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 15:33:09] 2025-06-03 19:32:58,499 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:33:09] 2025-06-03 19:32:58,657 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 15:33:09] 2025-06-03 19:32:58,658 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 15:33:09] 2025-06-03 19:32:58,658 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:33:09] 2025-06-03 19:32:58,658 | INFO     | will abort loop
[2025-06-03 15:33:09] 2025-06-03 19:32:58,835 | INFO     | all payload control threads have been joined
[2025-06-03 15:33:09] 2025-06-03 19:32:58,850 | INFO     | PID=740853 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-03 15:33:09] 2025-06-03 19:32:58,850 | INFO     | .. there are 6 such processes running
[2025-06-03 15:33:09] 2025-06-03 19:32:58,850 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 15:33:09] 2025-06-03 19:32:58,850 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 15:33:09] 2025-06-03 19:32:58,850 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 15:33:09] 2025-06-03 19:32:59,268 | INFO     | all data control threads have been joined
[2025-06-03 15:33:09] 2025-06-03 19:32:59,445 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 15:33:09] 2025-06-03 19:32:59,505 | INFO     | [job] retrieve thread has finished
[2025-06-03 15:33:09] 2025-06-03 19:32:59,505 | INFO     | [job] queue monitor thread has finished
[2025-06-03 15:33:09] 2025-06-03 19:32:59,517 | INFO     | [payload] validate_post thread has finished
[2025-06-03 15:33:09] 2025-06-03 19:32:59,663 | INFO     | [job] job monitor thread has finished
[2025-06-03 15:33:09] 2025-06-03 19:32:59,840 | INFO     | [payload] control thread has finished
[2025-06-03 15:33:09] 2025-06-03 19:32:59,988 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 15:33:09] 2025-06-03 19:33:00,156 | INFO     | all job control threads have been joined
[2025-06-03 15:33:09] 2025-06-03 19:33:00,159 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 15:33:09] 2025-06-03 19:33:00,232 | INFO     | [data] copytool_in thread has finished
[2025-06-03 15:33:09] 2025-06-03 19:33:00,273 | INFO     | [data] control thread has finished
[2025-06-03 15:33:09] 2025-06-03 19:33:00,504 | INFO     | [job] validate thread has finished
[2025-06-03 15:33:09] 2025-06-03 19:33:00,533 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 15:33:09] 2025-06-03 19:33:00,572 | INFO     | [payload] failed_post thread has finished
[2025-06-03 15:33:09] 2025-06-03 19:33:00,693 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 15:33:09] 2025-06-03 19:33:00,743 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 15:33:09] 2025-06-03 19:33:01,162 | INFO     | [job] control thread has finished
[2025-06-03 15:33:09] 2025-06-03 19:33:01,448 | INFO     | [data] copytool_out thread has finished
[2025-06-03 15:33:09] 2025-06-03 19:33:03,993 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 15:33:09] 2025-06-03 19:33:04,424 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139903423231808)>', '<ExcThread(monitor, started 139902712801024)>']
[2025-06-03 15:33:09] 2025-06-03 19:33:04,881 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 15:33:09] 2025-06-03 19:33:04,881 | INFO     | [monitor] control thread has ended
[2025-06-03 15:33:09] 2025-06-03 19:33:09,435 | INFO     | all workflow threads have been joined
[2025-06-03 15:33:09] 2025-06-03 19:33:09,435 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 15:33:09] 2025-06-03 19:33:09,435 | INFO     | traces error code: 0
[2025-06-03 15:33:09] 2025-06-03 19:33:09,436 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 15:33:09] 2025-06-03 19:33:09,492 [wrapper] ==== pilot stdout END ====
[2025-06-03 15:33:09] 2025-06-03 19:33:09,494 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 15:33:09] 2025-06-03 19:33:09,496 [wrapper] pilotpid: 740853
[2025-06-03 15:33:09] 2025-06-03 19:33:09,498 [wrapper] Pilot exit status: 0
[2025-06-03 15:33:09] 2025-06-03 19:33:09,504 [wrapper] pandaids: 6677733570
[2025-06-03 15:33:09] 2025-06-03 19:33:09,532 [wrapper] cleanup supervisor_pilot  941792 740854
[2025-06-03 15:33:09] 2025-06-03 19:33:09,533 [wrapper] Test setup, not cleaning
[2025-06-03 15:33:09] 2025-06-03 19:33:09,535 [wrapper] apfmon messages muted
[2025-06-03 15:33:09] 2025-06-03 19:33:09,537 [wrapper] ==== wrapper stdout END ====
[2025-06-03 15:33:09] 2025-06-03 19:33:09,538 [wrapper] ==== wrapper stderr END ====
[2025-06-03 15:33:09]  *** Error codes and diagnostics ***
[2025-06-03 15:33:09]     "exeErrorCode": 0,
[2025-06-03 15:33:09]     "exeErrorDiag": "",
[2025-06-03 15:33:09]     "pilotErrorCode": 0,
[2025-06-03 15:33:09]     "pilotErrorDiag": "",
[2025-06-03 15:33:09]  *** Listing of results directory ***
[2025-06-03 15:33:09] total 380208
[2025-06-03 15:33:09] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 11:35 pilot3.tar.gz
[2025-06-03 15:33:09] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 11:46 queuedata.json
[2025-06-03 15:33:09] -rwx------. 1 boincer umatlas     37140 Jun  3 11:46 runpilot2-wrapper.sh
[2025-06-03 15:33:09] -rw-r--r--. 1 boincer umatlas       100 Jun  3 14:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 15:33:09] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 14:00 run_atlas
[2025-06-03 15:33:09] -rw-r--r--. 1 boincer umatlas       105 Jun  3 14:00 job.xml
[2025-06-03 15:33:09] -rw-r--r--. 2 boincer umatlas 212587044 Jun  3 14:00 EVNT.45006593._001507.pool.root.1
[2025-06-03 15:33:09] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 14:00 start_atlas.sh
[2025-06-03 15:33:09] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 14:00 shared
[2025-06-03 15:33:09] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 14:00 input.tar.gz
[2025-06-03 15:33:09] -rw-r--r--. 1 boincer umatlas         0 Jun  3 14:00 boinc_lockfile
[2025-06-03 15:33:09] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 14:00 pandaJob.out
[2025-06-03 15:33:09] -rw-------. 1 boincer umatlas    985078 Jun  3 14:00 agis_schedconf.cvmfs.json
[2025-06-03 15:33:09] -rw-------. 1 boincer umatlas   1603667 Jun  3 14:00 agis_ddmendpoints.agis.ALL.json
[2025-06-03 15:33:09] drwx------. 4 boincer umatlas      4096 Jun  3 14:00 pilot3
[2025-06-03 15:33:09] -rw-r--r--. 1 boincer umatlas      6613 Jun  3 15:31 init_data.xml
[2025-06-03 15:33:09] -rw-------. 1 boincer umatlas        95 Jun  3 15:32 pilot_heartbeat.json
[2025-06-03 15:33:09] -rw-r--r--. 1 boincer umatlas       529 Jun  3 15:32 boinc_task_state.xml
[2025-06-03 15:33:09] -rw-------. 1 boincer umatlas 171164968 Jun  3 15:32 HITS.45006595._037558.pool.root.1
[2025-06-03 15:33:09] -rw-------. 1 boincer umatlas      1032 Jun  3 15:32 memory_monitor_summary.json
[2025-06-03 15:33:09] -rw-------. 1 boincer umatlas    330504 Jun  3 15:32 log.45006595._037558.job.log.tgz.1
[2025-06-03 15:33:09] -rw-------. 1 boincer umatlas      7708 Jun  3 15:32 heartbeat.json
[2025-06-03 15:33:09] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 15:33 boinc_mmap_file
[2025-06-03 15:33:09] -rw-r--r--. 1 boincer umatlas        27 Jun  3 15:33 wrapper_checkpoint.txt
[2025-06-03 15:33:09] -rw-------. 1 boincer umatlas      4932 Jun  3 15:33 pilotlog.txt
[2025-06-03 15:33:09] -rw-------. 1 boincer umatlas    536813 Jun  3 15:33 log.45006595._037558.job.log.1
[2025-06-03 15:33:09] -rw-------. 1 boincer umatlas       357 Jun  3 15:33 output.list
[2025-06-03 15:33:09] -rw-r--r--. 1 boincer umatlas       620 Jun  3 15:33 runtime_log
[2025-06-03 15:33:09] -rw-------. 1 boincer umatlas    890880 Jun  3 15:33 result.tar.gz
[2025-06-03 15:33:09] -rw-r--r--. 1 boincer umatlas      8649 Jun  3 15:33 runtime_log.err
[2025-06-03 15:33:09] -rw-------. 1 boincer umatlas       650 Jun  3 15:33 1ChKDmH1ig7n9Rq4apOajLDm4fhM0noT9bVof3QYDmG8YKDmorC6Jn.diag
[2025-06-03 15:33:09] -rw-r--r--. 1 boincer umatlas     21414 Jun  3 15:33 stderr.txt
[2025-06-03 15:33:09] HITS file was successfully produced:
[2025-06-03 15:33:09] -rw-------. 1 boincer umatlas 171164968 Jun  3 15:32 shared/HITS.pool.root.1
[2025-06-03 15:33:09]  *** Contents of shared directory: ***
[2025-06-03 15:33:09] total 376160
[2025-06-03 15:33:09] -rw-r--r--. 2 boincer umatlas 212587044 Jun  3 14:00 ATLAS.root_0
[2025-06-03 15:33:09] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 14:00 start_atlas.sh
[2025-06-03 15:33:09] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 14:00 input.tar.gz
[2025-06-03 15:33:09] -rw-------. 1 boincer umatlas 171164968 Jun  3 15:32 HITS.pool.root.1
[2025-06-03 15:33:09] -rw-------. 1 boincer umatlas    890880 Jun  3 15:33 result.tar.gz
15:33:11 (737246): run_atlas exited; CPU time 38568.535819
15:33:11 (737246): called boinc_finish(0)

</stderr_txt>
]]>

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