Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:59:48 (2371837): wrapper (7.7.26015): starting
13:59:48 (2371837): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 13:59:48] Arguments: --nthreads 8
[2025-06-03 13:59:48] Threads: 8
[2025-06-03 13:59:48] Checking for CVMFS
[2025-06-03 13:59:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:59:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:59:48] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:59:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:59:48] 2.12.6.0 2648775 90017 198136 146750 1 196 24444327 25181185 2848 16776704 1 463971994 99.496 640528665 23892 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 13:59:48] CVMFS is ok
[2025-06-03 13:59:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 13:59:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 13:59:48] Further information can be found at the LHC@home message board.
[2025-06-03 13:59:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:59:48] Checking for apptainer binary...
[2025-06-03 13:59:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:59:48] Running /usr/bin/apptainer --version
[2025-06-03 13:59:48] apptainer version 1.4.1-1.el9
[2025-06-03 13:59:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:59:48] c-16-35.aglt2.org
[2025-06-03 13:59:48] apptainer works
[2025-06-03 13:59:48] Set ATHENA_PROC_NUMBER=8
[2025-06-03 13:59:48] Set ATHENA_CORE_NUMBER=8
[2025-06-03 13:59:48] Starting ATLAS job with PandaID=6677677437
[2025-06-03 13:59:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 18:03:45]  *** The last 200 lines of the pilot log: ***
[2025-06-03 18:03:45] 2025-06-03 22:03:22,480 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 18:03:45] 2025-06-03 22:03:22,480 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6677677437/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 18:03:45] 2025-06-03 22:03:22,481 | INFO     | extracted standard info from prmon json
[2025-06-03 18:03:45] 2025-06-03 22:03:22,481 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 18:03:45] 2025-06-03 22:03:22,481 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 18:03:45] 2025-06-03 22:03:22,482 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 18:03:45] 2025-06-03 22:03:22,482 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 18:03:45] 2025-06-03 22:03:22,487 | INFO     | fitting pss+swap vs Time
[2025-06-03 18:03:45] 2025-06-03 22:03:22,488 | INFO     | sum of square deviations: 4233166631.1799207
[2025-06-03 18:03:45] 2025-06-03 22:03:22,489 | INFO     | sum of deviations: 77380826815.48958
[2025-06-03 18:03:45] 2025-06-03 22:03:22,490 | INFO     | mean x: 1748980877.0585773
[2025-06-03 18:03:45] 2025-06-03 22:03:22,490 | INFO     | mean y: 2062352.322175732
[2025-06-03 18:03:45] 2025-06-03 22:03:22,490 | INFO     | -- intersect: -31968705194.22958
[2025-06-03 18:03:45] 2025-06-03 22:03:22,490 | INFO     | intersect: -31968705194.22958
[2025-06-03 18:03:45] 2025-06-03 22:03:22,490 | INFO     | chi2: 3.5536771263814653
[2025-06-03 18:03:45] 2025-06-03 22:03:22,491 | INFO     | sum of square deviations: 3973007883.6623993
[2025-06-03 18:03:45] 2025-06-03 22:03:22,493 | INFO     | sum of deviations: 74863459129.03853
[2025-06-03 18:03:45] 2025-06-03 22:03:22,493 | INFO     | mean x: 1748980724.559829
[2025-06-03 18:03:45] 2025-06-03 22:03:22,493 | INFO     | mean y: 2060884.9615384615
[2025-06-03 18:03:45] 2025-06-03 22:03:22,493 | INFO     | -- intersect: -32954014417.326218
[2025-06-03 18:03:45] 2025-06-03 22:03:22,493 | INFO     | intersect: -32954014417.326218
[2025-06-03 18:03:45] 2025-06-03 22:03:22,494 | INFO     | chi2: 3.549119753289794
[2025-06-03 18:03:45] 2025-06-03 22:03:22,494 | INFO     | current chi2=3.549119753289794 (change=0.1282438704923097 %)
[2025-06-03 18:03:45] 2025-06-03 22:03:22,494 | INFO     | right removable region: 233
[2025-06-03 18:03:45] 2025-06-03 22:03:22,494 | INFO     | sum of square deviations: 3972999343.6623993
[2025-06-03 18:03:45] 2025-06-03 22:03:22,496 | INFO     | sum of deviations: 27913002782.051273
[2025-06-03 18:03:45] 2025-06-03 22:03:22,497 | INFO     | mean x: 1748981029.559829
[2025-06-03 18:03:45] 2025-06-03 22:03:22,497 | INFO     | mean y: 2091279.282051282
[2025-06-03 18:03:45] 2025-06-03 22:03:22,497 | INFO     | -- intersect: -12285681287.741753
[2025-06-03 18:03:45] 2025-06-03 22:03:22,497 | INFO     | intersect: -12285681287.741753
[2025-06-03 18:03:45] 2025-06-03 22:03:22,497 | INFO     | chi2: 1.1323739878432033
[2025-06-03 18:03:45] 2025-06-03 22:03:22,498 | INFO     | current chi2=1.1323739878432033 (change=68.13514712868009 %)
[2025-06-03 18:03:45] 2025-06-03 22:03:22,498 | INFO     | sum of square deviations: 3723715981.1440907
[2025-06-03 18:03:45] 2025-06-03 22:03:22,499 | INFO     | sum of deviations: -1828280001.524017
[2025-06-03 18:03:45] 2025-06-03 22:03:22,500 | INFO     | mean x: 1748981182.0611353
[2025-06-03 18:03:45] 2025-06-03 22:03:22,500 | INFO     | mean y: 2109404.323144105
[2025-06-03 18:03:45] 2025-06-03 22:03:22,500 | INFO     | -- intersect: 860828848.6621177
[2025-06-03 18:03:45] 2025-06-03 22:03:22,500 | INFO     | intersect: 860828848.6621177
[2025-06-03 18:03:45] 2025-06-03 22:03:22,501 | INFO     | chi2: 0.23080219221234544
[2025-06-03 18:03:45] 2025-06-03 22:03:22,501 | INFO     | current chi2=0.23080219221234544 (change=79.61784757596322 %)
[2025-06-03 18:03:45] 2025-06-03 22:03:22,501 | INFO     | sum of square deviations: 3485083981.125
[2025-06-03 18:03:45] 2025-06-03 22:03:22,503 | INFO     | sum of deviations: -6770391211.062501
[2025-06-03 18:03:45] 2025-06-03 22:03:22,503 | INFO     | mean x: 1748981334.5625
[2025-06-03 18:03:45] 2025-06-03 22:03:22,503 | INFO     | mean y: 2112528.6116071427
[2025-06-03 18:03:45] 2025-06-03 22:03:22,503 | INFO     | -- intersect: 3399817697.257757
[2025-06-03 18:03:45] 2025-06-03 22:03:22,503 | INFO     | intersect: 3399817697.257757
[2025-06-03 18:03:45] 2025-06-03 22:03:22,504 | INFO     | chi2: 0.18310325971438982
[2025-06-03 18:03:45] 2025-06-03 22:03:22,504 | INFO     | current chi2=0.18310325971438982 (change=20.666585547017277 %)
[2025-06-03 18:03:45] 2025-06-03 22:03:22,504 | INFO     | left removable region: 30
[2025-06-03 18:03:45] 2025-06-03 22:03:22,504 | INFO     | sum of square deviations: 2593929609.290622
[2025-06-03 18:03:45] 2025-06-03 22:03:22,505 | INFO     | sum of deviations: -8279251190.763548
[2025-06-03 18:03:45] 2025-06-03 22:03:22,506 | INFO     | mean x: 1748981609.0591133
[2025-06-03 18:03:45] 2025-06-03 22:03:22,506 | INFO     | mean y: 2114614.9802955664
[2025-06-03 18:03:45] 2025-06-03 22:03:22,506 | INFO     | -- intersect: 5584478152.357168
[2025-06-03 18:03:45] 2025-06-03 22:03:22,506 | INFO     | intersect: 5584478152.357168
[2025-06-03 18:03:45] 2025-06-03 22:03:22,506 | INFO     | chi2: 0.15652561619564254
[2025-06-03 18:03:45] 2025-06-03 22:03:22,507 | INFO     | -- intersect: 5584478152.357168
[2025-06-03 18:03:45] 2025-06-03 22:03:22,507 | INFO     | current memory leak: -3.19 B/s (using 203 data points, chi2=0.16)
[2025-06-03 18:03:45] 2025-06-03 22:03:22,508 | INFO     | ..............................
[2025-06-03 18:03:45] 2025-06-03 22:03:22,508 | INFO     | . Timing measurements:
[2025-06-03 18:03:45] 2025-06-03 22:03:22,508 | INFO     | . get job = 0 s
[2025-06-03 18:03:45] 2025-06-03 22:03:22,508 | INFO     | . initial setup = 2 s
[2025-06-03 18:03:45] 2025-06-03 22:03:22,508 | INFO     | . payload setup = 4 s
[2025-06-03 18:03:45] 2025-06-03 22:03:22,508 | INFO     | . stage-in = 0 s
[2025-06-03 18:03:45] 2025-06-03 22:03:22,508 | INFO     | . payload execution = 14573 s
[2025-06-03 18:03:45] 2025-06-03 22:03:22,508 | INFO     | . stage-out = 2 s
[2025-06-03 18:03:45] 2025-06-03 22:03:22,508 | INFO     | . log creation = 0 s
[2025-06-03 18:03:45] 2025-06-03 22:03:22,508 | INFO     | ..............................
[2025-06-03 18:03:45] 2025-06-03 22:03:22,617 | INFO     | 
[2025-06-03 18:03:45] 2025-06-03 22:03:22,617 | INFO     | job summary report
[2025-06-03 18:03:45] 2025-06-03 22:03:22,617 | INFO     | --------------------------------------------------
[2025-06-03 18:03:45] 2025-06-03 22:03:22,617 | INFO     | PanDA job id: 6677677437
[2025-06-03 18:03:45] 2025-06-03 22:03:22,617 | INFO     | task id: 45006595
[2025-06-03 18:03:45] 2025-06-03 22:03:22,618 | INFO     | errors: (none)
[2025-06-03 18:03:45] 2025-06-03 22:03:22,618 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 18:03:45] 2025-06-03 22:03:22,618 | INFO     | pilot state: finished 
[2025-06-03 18:03:45] 2025-06-03 22:03:22,618 | INFO     | transexitcode: 0
[2025-06-03 18:03:45] 2025-06-03 22:03:22,618 | INFO     | exeerrorcode: 0
[2025-06-03 18:03:45] 2025-06-03 22:03:22,618 | INFO     | exeerrordiag: 
[2025-06-03 18:03:45] 2025-06-03 22:03:22,618 | INFO     | exitcode: 0
[2025-06-03 18:03:45] 2025-06-03 22:03:22,618 | INFO     | exitmsg: OK
[2025-06-03 18:03:45] 2025-06-03 22:03:22,618 | INFO     | cpuconsumptiontime: 46438 s
[2025-06-03 18:03:45] 2025-06-03 22:03:22,619 | INFO     | nevents: 400
[2025-06-03 18:03:45] 2025-06-03 22:03:22,619 | INFO     | neventsw: 0
[2025-06-03 18:03:45] 2025-06-03 22:03:22,619 | INFO     | pid: 2392229
[2025-06-03 18:03:45] 2025-06-03 22:03:22,619 | INFO     | pgrp: 2392229
[2025-06-03 18:03:45] 2025-06-03 22:03:22,619 | INFO     | corecount: 8
[2025-06-03 18:03:45] 2025-06-03 22:03:22,619 | INFO     | event service: False
[2025-06-03 18:03:45] 2025-06-03 22:03:22,619 | INFO     | sizes: {0: 2405184, 3: 2405390, 11: 2405418, 14581: 2436233, 14582: 2436232, 14584: 2445229, 14587: 2445441, 14591: 2445611}
[2025-06-03 18:03:45] 2025-06-03 22:03:22,619 | INFO     | --------------------------------------------------
[2025-06-03 18:03:45] 2025-06-03 22:03:22,619 | INFO     | 
[2025-06-03 18:03:45] 2025-06-03 22:03:22,620 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-06-03 18:03:45] 2025-06-03 22:03:22,638 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 18:03:45] 2025-06-03 22:03:22,638 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 18:03:45] 2025-06-03 22:03:22,638 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 18:03:45] 2025-06-03 22:03:22,638 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 18:03:45] 2025-06-03 22:03:22,638 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 18:03:45] 2025-06-03 22:03:22,638 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 18:03:45] 2025-06-03 22:03:22,638 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 18:03:45] 2025-06-03 22:03:22,639 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 18:03:45] 2025-06-03 22:03:22,639 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 18:03:45] 2025-06-03 22:03:22,639 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 18:03:45] 2025-06-03 22:03:22,639 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 18:03:45] 2025-06-03 22:03:22,639 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 18:03:45] 2025-06-03 22:03:22,639 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 18:03:45] 2025-06-03 22:03:22,639 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 18:03:45] 2025-06-03 22:03:22,639 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 18:03:45] 2025-06-03 22:03:22,639 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 18:03:45] 2025-06-03 22:03:22,639 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 18:03:45] 2025-06-03 22:03:22,640 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 18:03:45] 2025-06-03 22:03:22,640 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 18:03:45] 2025-06-03 22:03:22,640 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 18:03:45] 2025-06-03 22:03:22,640 | INFO     | job 6677677437 has completed (purged errors)
[2025-06-03 18:03:45] 2025-06-03 22:03:22,640 | INFO     | overall cleanup function is called
[2025-06-03 18:03:45] 2025-06-03 22:03:23,648 | INFO     | --- collectZombieJob: --- 10, [2392229]
[2025-06-03 18:03:45] 2025-06-03 22:03:23,689 | INFO     | zombie collector waiting for pid 2392229
[2025-06-03 18:03:45] 2025-06-03 22:03:23,689 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 18:03:45] 2025-06-03 22:03:23,689 | INFO     | collected zombie processes
[2025-06-03 18:03:45] 2025-06-03 22:03:23,689 | INFO     | will attempt to kill all subprocesses of pid=2392229
[2025-06-03 18:03:45] 2025-06-03 22:03:24,154 | INFO     | process IDs to be killed: [2392229] (in reverse order)
[2025-06-03 18:03:45] 2025-06-03 22:03:24,277 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 18:03:45] 2025-06-03 22:03:24,277 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 18:03:45] 2025-06-03 22:03:24,293 | INFO     | did not find any defunct processes belonging to 2392229
[2025-06-03 18:03:45] 2025-06-03 22:03:24,308 | INFO     | did not find any defunct processes belonging to 2392229
[2025-06-03 18:03:45] 2025-06-03 22:03:24,309 | INFO     | ready for new job
[2025-06-03 18:03:45] 2025-06-03 22:03:24,309 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 18:03:45] 2025-06-03 22:03:24,312 | INFO     | **************************************
[2025-06-03 18:03:45] 2025-06-03 22:03:24,312 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 18:03:45] 2025-06-03 22:03:24,312 | INFO     | **************************************
[2025-06-03 18:03:45] 2025-06-03 22:03:24,312 | INFO     | 
[2025-06-03 18:03:45] 2025-06-03 22:03:24,328 | INFO     | architecture information:
[2025-06-03 18:03:45] 2025-06-03 22:03:24,328 | INFO     | executing command: cat /etc/os-release
[2025-06-03 18:03:45] 2025-06-03 22:03:24,341 | INFO     | cat /etc/os-release:
[2025-06-03 18:03:45] NAME="CentOS Linux"
[2025-06-03 18:03:45] VERSION="7 (Core)"
[2025-06-03 18:03:45] ID="centos"
[2025-06-03 18:03:45] ID_LIKE="rhel fedora"
[2025-06-03 18:03:45] VERSION_ID="7"
[2025-06-03 18:03:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 18:03:45] ANSI_COLOR="0;31"
[2025-06-03 18:03:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 18:03:45] HOME_URL="https://www.centos.org/"
[2025-06-03 18:03:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 18:03:45] 
[2025-06-03 18:03:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 18:03:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 18:03:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 18:03:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 18:03:45] 
[2025-06-03 18:03:45] 2025-06-03 22:03:24,342 | INFO     | **************************************
[2025-06-03 18:03:45] 2025-06-03 22:03:24,844 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-06-03 18:03:45] 2025-06-03 22:03:24,860 | INFO     | sufficient remaining disk space (61615374336 B)
[2025-06-03 18:03:45] 2025-06-03 22:03:24,860 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 18:03:45] 2025-06-03 22:03:24,860 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 18:03:45] 2025-06-03 22:03:24,860 | INFO     | update_server=False
[2025-06-03 18:03:45] 2025-06-03 22:03:24,861 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 18:03:45] 2025-06-03 22:03:24,861 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 18:03:45] 2025-06-03 22:03:24,861 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:03:45] 2025-06-03 22:03:24,862 | INFO     | aborting loop
[2025-06-03 18:03:45] 2025-06-03 22:03:25,321 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 18:03:45] 2025-06-03 22:03:25,322 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 18:03:45] 2025-06-03 22:03:25,322 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 18:03:45] 2025-06-03 22:03:25,565 | INFO     | all job control threads have been joined
[2025-06-03 18:03:45] 2025-06-03 22:03:25,847 | INFO     | all data control threads have been joined
[2025-06-03 18:03:45] 2025-06-03 22:03:25,856 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 18:03:45] 2025-06-03 22:03:25,866 | INFO     | [job] retrieve thread has finished
[2025-06-03 18:03:45] 2025-06-03 22:03:25,867 | INFO     | [job] job monitor thread has finished
[2025-06-03 18:03:45] 2025-06-03 22:03:25,933 | INFO     | [data] copytool_in thread has finished
[2025-06-03 18:03:45] 2025-06-03 22:03:26,034 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 18:03:45] 2025-06-03 22:03:26,167 | INFO     | all payload control threads have been joined
[2025-06-03 18:03:45] 2025-06-03 22:03:26,371 | INFO     | [job] validate thread has finished
[2025-06-03 18:03:45] 2025-06-03 22:03:26,570 | INFO     | [job] control thread has finished
[2025-06-03 18:03:45] 2025-06-03 22:03:26,811 | INFO     | [payload] failed_post thread has finished
[2025-06-03 18:03:45] 2025-06-03 22:03:26,852 | INFO     | [data] control thread has finished
[2025-06-03 18:03:45] 2025-06-03 22:03:26,914 | INFO     | [payload] validate_post thread has finished
[2025-06-03 18:03:45] 2025-06-03 22:03:27,084 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 18:03:45] 2025-06-03 22:03:27,173 | INFO     | [payload] control thread has finished
[2025-06-03 18:03:45] 2025-06-03 22:03:27,222 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 18:03:45] 2025-06-03 22:03:27,230 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 18:03:45] 2025-06-03 22:03:27,627 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:03:45] 2025-06-03 22:03:27,862 | INFO     | [data] copytool_out thread has finished
[2025-06-03 18:03:45] 2025-06-03 22:03:28,632 | INFO     | [job] queue monitor thread has finished
[2025-06-03 18:03:45] 2025-06-03 22:03:28,867 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 18:03:45] 2025-06-03 22:03:29,244 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139623558903616)>', '<ExcThread(monitor, started 139623070164736)>']
[2025-06-03 18:03:45] 2025-06-03 22:03:29,342 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 18:03:45] 2025-06-03 22:03:29,342 | INFO     | [monitor] control thread has ended
[2025-06-03 18:03:45] 2025-06-03 22:03:34,269 | INFO     | all workflow threads have been joined
[2025-06-03 18:03:45] 2025-06-03 22:03:34,269 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 18:03:45] 2025-06-03 22:03:34,270 | INFO     | traces error code: 0
[2025-06-03 18:03:45] 2025-06-03 22:03:34,270 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 18:03:45] 2025-06-03 22:03:34,446 [wrapper] ==== pilot stdout END ====
[2025-06-03 18:03:45] 2025-06-03 22:03:34,448 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 18:03:45] 2025-06-03 22:03:34,451 [wrapper] pilotpid: 2383143
[2025-06-03 18:03:45] 2025-06-03 22:03:34,453 [wrapper] Pilot exit status: 0
[2025-06-03 18:03:45] 2025-06-03 22:03:34,462 [wrapper] pandaids: 6677677437
[2025-06-03 18:03:45] 2025-06-03 22:03:34,566 [wrapper] cleanup supervisor_pilot  597728 2383144
[2025-06-03 18:03:45] 2025-06-03 22:03:34,568 [wrapper] Test setup, not cleaning
[2025-06-03 18:03:45] 2025-06-03 22:03:34,571 [wrapper] apfmon messages muted
[2025-06-03 18:03:45] 2025-06-03 22:03:34,574 [wrapper] ==== wrapper stdout END ====
[2025-06-03 18:03:45] 2025-06-03 22:03:34,576 [wrapper] ==== wrapper stderr END ====
[2025-06-03 18:03:45]  *** Error codes and diagnostics ***
[2025-06-03 18:03:45]     "exeErrorCode": 0,
[2025-06-03 18:03:45]     "exeErrorDiag": "",
[2025-06-03 18:03:45]     "pilotErrorCode": 0,
[2025-06-03 18:03:45]     "pilotErrorDiag": "",
[2025-06-03 18:03:45]  *** Listing of results directory ***
[2025-06-03 18:03:45] total 391620
[2025-06-03 18:03:45] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 11:35 pilot3.tar.gz
[2025-06-03 18:03:45] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 11:41 queuedata.json
[2025-06-03 18:03:45] -rwx------. 1 boincer umatlas     37140 Jun  3 11:41 runpilot2-wrapper.sh
[2025-06-03 18:03:45] -rw-r--r--. 1 boincer umatlas       100 Jun  3 13:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 18:03:45] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 13:59 run_atlas
[2025-06-03 18:03:45] -rw-r--r--. 1 boincer umatlas       105 Jun  3 13:59 job.xml
[2025-06-03 18:03:45] -rw-r--r--. 2 boincer umatlas 214836060 Jun  3 13:59 EVNT.45006593._001496.pool.root.1
[2025-06-03 18:03:45] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:59 start_atlas.sh
[2025-06-03 18:03:45] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 13:59 shared
[2025-06-03 18:03:45] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 13:59 input.tar.gz
[2025-06-03 18:03:45] -rw-r--r--. 1 boincer umatlas         0 Jun  3 13:59 boinc_lockfile
[2025-06-03 18:03:45] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 13:59 pandaJob.out
[2025-06-03 18:03:45] -rw-------. 1 boincer umatlas    985078 Jun  3 13:59 agis_schedconf.cvmfs.json
[2025-06-03 18:03:45] drwx------. 4 boincer umatlas      4096 Jun  3 13:59 pilot3
[2025-06-03 18:03:45] -rw-r--r--. 1 boincer umatlas      6613 Jun  3 17:55 init_data.xml
[2025-06-03 18:03:45] -rw-------. 1 boincer umatlas        95 Jun  3 18:02 pilot_heartbeat.json
[2025-06-03 18:03:45] -rw-r--r--. 1 boincer umatlas       531 Jun  3 18:02 boinc_task_state.xml
[2025-06-03 18:03:45] -rw-------. 1 boincer umatlas 179025166 Jun  3 18:02 HITS.45006595._037247.pool.root.1
[2025-06-03 18:03:45] -rw-------. 1 boincer umatlas      1042 Jun  3 18:03 memory_monitor_summary.json
[2025-06-03 18:03:45] -rw-------. 1 boincer umatlas   1603667 Jun  3 18:03 agis_ddmendpoints.agis.ALL.json
[2025-06-03 18:03:45] -rw-------. 1 boincer umatlas    408977 Jun  3 18:03 log.45006595._037247.job.log.tgz.1
[2025-06-03 18:03:45] -rw-------. 1 boincer umatlas      7719 Jun  3 18:03 heartbeat.json
[2025-06-03 18:03:45] -rw-------. 1 boincer umatlas      4353 Jun  3 18:03 pilotlog.txt
[2025-06-03 18:03:45] -rw-------. 1 boincer umatlas   1253583 Jun  3 18:03 log.45006595._037247.job.log.1
[2025-06-03 18:03:45] -rw-------. 1 boincer umatlas       357 Jun  3 18:03 output.list
[2025-06-03 18:03:45] -rw-r--r--. 1 boincer umatlas       620 Jun  3 18:03 runtime_log
[2025-06-03 18:03:45] -rw-------. 1 boincer umatlas   1679360 Jun  3 18:03 result.tar.gz
[2025-06-03 18:03:45] -rw-r--r--. 1 boincer umatlas      8655 Jun  3 18:03 runtime_log.err
[2025-06-03 18:03:45] -rw-------. 1 boincer umatlas       654 Jun  3 18:03 ERyMDmWwig7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJskKDmaPoLAn.diag
[2025-06-03 18:03:45] -rw-r--r--. 1 boincer umatlas        28 Jun  3 18:03 wrapper_checkpoint.txt
[2025-06-03 18:03:45] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 18:03 boinc_mmap_file
[2025-06-03 18:03:45] -rw-r--r--. 1 boincer umatlas     20902 Jun  3 18:03 stderr.txt
[2025-06-03 18:03:45] HITS file was successfully produced:
[2025-06-03 18:03:45] -rw-------. 1 boincer umatlas 179025166 Jun  3 18:02 shared/HITS.pool.root.1
[2025-06-03 18:03:45]  *** Contents of shared directory: ***
[2025-06-03 18:03:45] total 386796
[2025-06-03 18:03:45] -rw-r--r--. 2 boincer umatlas 214836060 Jun  3 13:59 ATLAS.root_0
[2025-06-03 18:03:45] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:59 start_atlas.sh
[2025-06-03 18:03:45] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 13:59 input.tar.gz
[2025-06-03 18:03:45] -rw-------. 1 boincer umatlas 179025166 Jun  3 18:02 HITS.pool.root.1
[2025-06-03 18:03:45] -rw-------. 1 boincer umatlas   1679360 Jun  3 18:03 result.tar.gz
18:03:47 (2371837): run_atlas exited; CPU time 47255.897441
18:03:47 (2371837): called boinc_finish(0)

</stderr_txt>
]]>

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