Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:59:14 (3991499): wrapper (7.7.26015): starting
13:59:14 (3991499): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 13:59:14] Arguments: --nthreads 8
[2025-06-03 13:59:14] Threads: 8
[2025-06-03 13:59:14] Checking for CVMFS
[2025-06-03 13:59:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:59:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:59:14] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:59:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:59:14] 2.12.6.0 551375 177894 294596 146750 3 197 31832535 32935936 4158 130560 1 370541332 99.657 340836122 26769 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 13:59:14] CVMFS is ok
[2025-06-03 13:59:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 13:59:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 13:59:14] Further information can be found at the LHC@home message board.
[2025-06-03 13:59:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:59:14] Checking for apptainer binary...
[2025-06-03 13:59:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:59:14] Running /usr/bin/apptainer --version
[2025-06-03 13:59:14] apptainer version 1.4.1-1.el9
[2025-06-03 13:59:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:59:14] c-4-40.aglt2.org
[2025-06-03 13:59:14] apptainer works
[2025-06-03 13:59:14] Set ATHENA_PROC_NUMBER=8
[2025-06-03 13:59:14] Set ATHENA_CORE_NUMBER=8
[2025-06-03 13:59:14] Starting ATLAS job with PandaID=6677677378
[2025-06-03 13:59:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 17:03:27]  *** The last 200 lines of the pilot log: ***
[2025-06-03 17:03:27] 2025-06-03 20:53:00,011 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 17:03:27] 2025-06-03 20:53:00,012 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6677677378/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 17:03:27] 2025-06-03 20:53:00,013 | INFO     | extracted standard info from prmon json
[2025-06-03 17:03:27] 2025-06-03 20:53:00,013 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 17:03:27] 2025-06-03 20:53:00,013 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 17:03:27] 2025-06-03 20:53:00,013 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 17:03:27] 2025-06-03 20:53:00,013 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 17:03:27] 2025-06-03 20:53:00,018 | INFO     | fitting pss+swap vs Time
[2025-06-03 17:03:27] 2025-06-03 20:53:00,018 | INFO     | sum of square deviations: 1550388100.4210498
[2025-06-03 17:03:27] 2025-06-03 20:53:00,019 | INFO     | sum of deviations: 41378113482.92984
[2025-06-03 17:03:27] 2025-06-03 20:53:00,020 | INFO     | mean x: 1748978774.122807
[2025-06-03 17:03:27] 2025-06-03 20:53:00,020 | INFO     | mean y: 2024276.812865497
[2025-06-03 17:03:27] 2025-06-03 20:53:00,020 | INFO     | -- intersect: -46676250779.11355
[2025-06-03 17:03:27] 2025-06-03 20:53:00,020 | INFO     | intersect: -46676250779.11355
[2025-06-03 17:03:27] 2025-06-03 20:53:00,020 | INFO     | chi2: 4.455827975053538
[2025-06-03 17:03:27] 2025-06-03 20:53:00,021 | INFO     | sum of square deviations: 1418326912.843381
[2025-06-03 17:03:27] 2025-06-03 20:53:00,022 | INFO     | sum of deviations: 48272354119.84341
[2025-06-03 17:03:27] 2025-06-03 20:53:00,022 | INFO     | mean x: 1748978621.626506
[2025-06-03 17:03:27] 2025-06-03 20:53:00,022 | INFO     | mean y: 2032001.126506024
[2025-06-03 17:03:27] 2025-06-03 20:53:00,022 | INFO     | -- intersect: -59523959226.054855
[2025-06-03 17:03:27] 2025-06-03 20:53:00,022 | INFO     | intersect: -59523959226.054855
[2025-06-03 17:03:27] 2025-06-03 20:53:00,022 | INFO     | chi2: 3.8168786315473406
[2025-06-03 17:03:27] 2025-06-03 20:53:00,023 | INFO     | current chi2=3.8168786315473406 (change=14.339632209399195 %)
[2025-06-03 17:03:27] 2025-06-03 20:53:00,023 | INFO     | right removable region: 165
[2025-06-03 17:03:27] 2025-06-03 20:53:00,023 | INFO     | sum of square deviations: 1418314102.843381
[2025-06-03 17:03:27] 2025-06-03 20:53:00,024 | INFO     | sum of deviations: 7169575934.01204
[2025-06-03 17:03:27] 2025-06-03 20:53:00,024 | INFO     | mean x: 1748978926.626506
[2025-06-03 17:03:27] 2025-06-03 20:53:00,024 | INFO     | mean y: 2063634.9518072288
[2025-06-03 17:03:27] 2025-06-03 20:53:00,024 | INFO     | -- intersect: -8839022550.609652
[2025-06-03 17:03:27] 2025-06-03 20:53:00,024 | INFO     | intersect: -8839022550.609652
[2025-06-03 17:03:27] 2025-06-03 20:53:00,025 | INFO     | chi2: 2.0058210864461907
[2025-06-03 17:03:27] 2025-06-03 20:53:00,025 | INFO     | current chi2=2.0058210864461907 (change=54.98432395334808 %)
[2025-06-03 17:03:27] 2025-06-03 20:53:00,025 | INFO     | sum of square deviations: 1293961180.2608674
[2025-06-03 17:03:27] 2025-06-03 20:53:00,026 | INFO     | sum of deviations: -16334695478.347828
[2025-06-03 17:03:27] 2025-06-03 20:53:00,026 | INFO     | mean x: 1748979079.1304348
[2025-06-03 17:03:27] 2025-06-03 20:53:00,027 | INFO     | mean y: 2092376.9689440993
[2025-06-03 17:03:27] 2025-06-03 20:53:00,027 | INFO     | -- intersect: 22080838703.684277
[2025-06-03 17:03:27] 2025-06-03 20:53:00,027 | INFO     | intersect: 22080838703.684277
[2025-06-03 17:03:27] 2025-06-03 20:53:00,027 | INFO     | chi2: 0.8693739295246041
[2025-06-03 17:03:27] 2025-06-03 20:53:00,027 | INFO     | current chi2=0.8693739295246041 (change=56.65745387765787 %)
[2025-06-03 17:03:27] 2025-06-03 20:53:00,028 | INFO     | sum of square deviations: 1177096770.1730816
[2025-06-03 17:03:27] 2025-06-03 20:53:00,029 | INFO     | sum of deviations: -17963285899.076927
[2025-06-03 17:03:27] 2025-06-03 20:53:00,029 | INFO     | mean x: 1748979231.6346154
[2025-06-03 17:03:27] 2025-06-03 20:53:00,029 | INFO     | mean y: 2094403.3846153845
[2025-06-03 17:03:27] 2025-06-03 20:53:00,029 | INFO     | -- intersect: 26692690083.78975
[2025-06-03 17:03:27] 2025-06-03 20:53:00,029 | INFO     | intersect: 26692690083.78975
[2025-06-03 17:03:27] 2025-06-03 20:53:00,029 | INFO     | chi2: 0.8167383288540291
[2025-06-03 17:03:27] 2025-06-03 20:53:00,030 | INFO     | current chi2=0.8167383288540291 (change=6.054425936070746 %)
[2025-06-03 17:03:27] 2025-06-03 20:53:00,030 | INFO     | left removable region: 30
[2025-06-03 17:03:27] 2025-06-03 20:53:00,030 | INFO     | sum of square deviations: 762807705.7333335
[2025-06-03 17:03:27] 2025-06-03 20:53:00,031 | INFO     | sum of deviations: -7248488750.977774
[2025-06-03 17:03:27] 2025-06-03 20:53:00,031 | INFO     | mean x: 1748979506.1555555
[2025-06-03 17:03:27] 2025-06-03 20:53:00,031 | INFO     | mean y: 2101652.9037037035
[2025-06-03 17:03:27] 2025-06-03 20:53:00,031 | INFO     | -- intersect: 16621569679.739634
[2025-06-03 17:03:27] 2025-06-03 20:53:00,031 | INFO     | intersect: 16621569679.739634
[2025-06-03 17:03:27] 2025-06-03 20:53:00,031 | INFO     | chi2: 0.1377005426784962
[2025-06-03 17:03:27] 2025-06-03 20:53:00,032 | INFO     | -- intersect: 16621569679.739634
[2025-06-03 17:03:27] 2025-06-03 20:53:00,032 | INFO     | current memory leak: -9.50 B/s (using 135 data points, chi2=0.14)
[2025-06-03 17:03:27] 2025-06-03 20:53:00,032 | INFO     | ..............................
[2025-06-03 17:03:27] 2025-06-03 20:53:00,032 | INFO     | . Timing measurements:
[2025-06-03 17:03:27] 2025-06-03 20:53:00,033 | INFO     | . get job = 0 s
[2025-06-03 17:03:27] 2025-06-03 20:53:00,033 | INFO     | . initial setup = 2 s
[2025-06-03 17:03:27] 2025-06-03 20:53:00,033 | INFO     | . payload setup = 6 s
[2025-06-03 17:03:27] 2025-06-03 20:53:00,033 | INFO     | . stage-in = 0 s
[2025-06-03 17:03:27] 2025-06-03 20:53:00,033 | INFO     | . payload execution = 10383 s
[2025-06-03 17:03:27] 2025-06-03 20:53:00,033 | INFO     | . stage-out = 0 s
[2025-06-03 17:03:27] 2025-06-03 20:53:00,033 | INFO     | . log creation = 0 s
[2025-06-03 17:03:27] 2025-06-03 20:53:00,033 | INFO     | ..............................
[2025-06-03 17:03:27] 2025-06-03 20:53:00,344 | INFO     | 
[2025-06-03 17:03:27] 2025-06-03 20:53:00,344 | INFO     | job summary report
[2025-06-03 17:03:27] 2025-06-03 20:53:00,345 | INFO     | --------------------------------------------------
[2025-06-03 17:03:27] 2025-06-03 20:53:00,345 | INFO     | PanDA job id: 6677677378
[2025-06-03 17:03:27] 2025-06-03 20:53:00,345 | INFO     | task id: 45006595
[2025-06-03 17:03:27] 2025-06-03 20:53:00,345 | INFO     | errors: (none)
[2025-06-03 17:03:27] 2025-06-03 20:53:00,363 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 17:03:27] 2025-06-03 20:53:00,363 | INFO     | pilot state: finished 
[2025-06-03 17:03:27] 2025-06-03 20:53:00,363 | INFO     | transexitcode: 0
[2025-06-03 17:03:27] 2025-06-03 20:53:00,364 | INFO     | exeerrorcode: 0
[2025-06-03 17:03:27] 2025-06-03 20:53:00,364 | INFO     | exeerrordiag: 
[2025-06-03 17:03:27] 2025-06-03 20:53:00,364 | INFO     | exitcode: 0
[2025-06-03 17:03:27] 2025-06-03 20:53:00,364 | INFO     | exitmsg: OK
[2025-06-03 17:03:27] 2025-06-03 20:53:00,364 | INFO     | cpuconsumptiontime: 40190 s
[2025-06-03 17:03:27] 2025-06-03 20:53:00,364 | INFO     | nevents: 400
[2025-06-03 17:03:27] 2025-06-03 20:53:00,364 | INFO     | neventsw: 0
[2025-06-03 17:03:27] 2025-06-03 20:53:00,364 | INFO     | pid: 4001518
[2025-06-03 17:03:27] 2025-06-03 20:53:00,365 | INFO     | pgrp: 4001518
[2025-06-03 17:03:27] 2025-06-03 20:53:00,365 | INFO     | corecount: 8
[2025-06-03 17:03:27] 2025-06-03 20:53:00,365 | INFO     | event service: False
[2025-06-03 17:03:27] 2025-06-03 20:53:00,365 | INFO     | sizes: {0: 2405184, 1: 2405184, 4: 2405418, 11: 2405446, 10393: 2434303, 10395: 2443244, 10396: 2443428, 10401: 2443598}
[2025-06-03 17:03:27] 2025-06-03 20:53:00,365 | INFO     | --------------------------------------------------
[2025-06-03 17:03:27] 2025-06-03 20:53:00,365 | INFO     | 
[2025-06-03 17:03:27] 2025-06-03 20:53:00,365 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-06-03 17:03:27] 2025-06-03 20:53:00,385 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 17:03:27] 2025-06-03 20:53:00,385 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 17:03:27] 2025-06-03 20:53:00,385 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 17:03:27] 2025-06-03 20:53:00,385 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 17:03:27] 2025-06-03 20:53:00,385 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 17:03:27] 2025-06-03 20:53:00,385 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 17:03:27] 2025-06-03 20:53:00,386 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 17:03:27] 2025-06-03 20:53:00,386 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 17:03:27] 2025-06-03 20:53:00,386 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 17:03:27] 2025-06-03 20:53:00,386 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 17:03:27] 2025-06-03 20:53:00,386 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 17:03:27] 2025-06-03 20:53:00,386 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 17:03:27] 2025-06-03 20:53:00,386 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 17:03:27] 2025-06-03 20:53:00,386 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 17:03:27] 2025-06-03 20:53:00,386 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 17:03:27] 2025-06-03 20:53:00,386 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 17:03:27] 2025-06-03 20:53:00,386 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 17:03:27] 2025-06-03 20:53:00,387 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 17:03:27] 2025-06-03 20:53:00,387 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 17:03:27] 2025-06-03 20:53:00,387 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 17:03:27] 2025-06-03 20:53:00,387 | INFO     | job 6677677378 has completed (purged errors)
[2025-06-03 17:03:27] 2025-06-03 20:53:00,387 | INFO     | overall cleanup function is called
[2025-06-03 17:03:27] 2025-06-03 20:53:01,396 | INFO     | --- collectZombieJob: --- 10, [4001518]
[2025-06-03 17:03:27] 2025-06-03 20:53:01,396 | INFO     | zombie collector waiting for pid 4001518
[2025-06-03 17:03:27] 2025-06-03 20:53:01,396 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 17:03:27] 2025-06-03 20:53:01,396 | INFO     | collected zombie processes
[2025-06-03 17:03:27] 2025-06-03 20:53:01,396 | INFO     | will attempt to kill all subprocesses of pid=4001518
[2025-06-03 17:03:27] 2025-06-03 20:53:01,748 | INFO     | process IDs to be killed: [4001518] (in reverse order)
[2025-06-03 17:03:27] 2025-06-03 20:53:01,850 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 17:03:27] 2025-06-03 20:53:01,850 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 17:03:27] 2025-06-03 20:53:01,865 | INFO     | did not find any defunct processes belonging to 4001518
[2025-06-03 17:03:27] 2025-06-03 20:53:01,879 | INFO     | did not find any defunct processes belonging to 4001518
[2025-06-03 17:03:27] 2025-06-03 20:53:01,880 | INFO     | ready for new job
[2025-06-03 17:03:27] 2025-06-03 20:53:01,880 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 17:03:27] 2025-06-03 20:53:01,881 | INFO     | **************************************
[2025-06-03 17:03:27] 2025-06-03 20:53:01,882 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 17:03:27] 2025-06-03 20:53:01,882 | INFO     | **************************************
[2025-06-03 17:03:27] 2025-06-03 20:53:01,882 | INFO     | 
[2025-06-03 17:03:27] 2025-06-03 20:53:01,896 | INFO     | architecture information:
[2025-06-03 17:03:27] 2025-06-03 20:53:01,897 | INFO     | executing command: cat /etc/os-release
[2025-06-03 17:03:27] 2025-06-03 20:53:01,910 | INFO     | cat /etc/os-release:
[2025-06-03 17:03:27] NAME="CentOS Linux"
[2025-06-03 17:03:27] VERSION="7 (Core)"
[2025-06-03 17:03:27] ID="centos"
[2025-06-03 17:03:27] ID_LIKE="rhel fedora"
[2025-06-03 17:03:27] VERSION_ID="7"
[2025-06-03 17:03:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 17:03:27] ANSI_COLOR="0;31"
[2025-06-03 17:03:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 17:03:27] HOME_URL="https://www.centos.org/"
[2025-06-03 17:03:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 17:03:27] 
[2025-06-03 17:03:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 17:03:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 17:03:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 17:03:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 17:03:27] 
[2025-06-03 17:03:27] 2025-06-03 20:53:01,911 | INFO     | **************************************
[2025-06-03 17:03:27] 2025-06-03 20:53:02,413 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-06-03 17:03:27] 2025-06-03 20:53:02,432 | INFO     | sufficient remaining disk space (74053582848 B)
[2025-06-03 17:03:27] 2025-06-03 20:53:02,433 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 17:03:27] 2025-06-03 20:53:02,433 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 17:03:27] 2025-06-03 20:53:02,433 | INFO     | update_server=False
[2025-06-03 17:03:27] 2025-06-03 20:53:02,433 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 17:03:27] 2025-06-03 20:53:02,473 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 17:03:27] 2025-06-03 20:53:02,474 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 17:03:27] 2025-06-03 20:53:02,474 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 17:03:27] 2025-06-03 20:53:02,510 | INFO     | all job control threads have been joined
[2025-06-03 17:03:27] 2025-06-03 20:53:02,521 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 17:03:27] 2025-06-03 20:53:02,612 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:03:27] 2025-06-03 20:53:02,612 | INFO     | aborting loop
[2025-06-03 17:03:27] 2025-06-03 20:53:02,796 | INFO     | all data control threads have been joined
[2025-06-03 17:03:27] 2025-06-03 20:53:03,439 | INFO     | [job] retrieve thread has finished
[2025-06-03 17:03:27] 2025-06-03 20:53:03,515 | INFO     | [job] control thread has finished
[2025-06-03 17:03:27] 2025-06-03 20:53:03,550 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 17:03:27] 2025-06-03 20:53:03,617 | INFO     | [job] job monitor thread has finished
[2025-06-03 17:03:27] 2025-06-03 20:53:03,650 | INFO     | all payload control threads have been joined
[2025-06-03 17:03:27] 2025-06-03 20:53:03,802 | INFO     | [data] control thread has finished
[2025-06-03 17:03:27] 2025-06-03 20:53:03,854 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 17:03:27] 2025-06-03 20:53:04,065 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 17:03:27] 2025-06-03 20:53:04,066 | INFO     | [job] validate thread has finished
[2025-06-03 17:03:27] 2025-06-03 20:53:04,125 | INFO     | [payload] failed_post thread has finished
[2025-06-03 17:03:27] 2025-06-03 20:53:04,398 | INFO     | [data] copytool_in thread has finished
[2025-06-03 17:03:27] 2025-06-03 20:53:04,466 | INFO     | [payload] validate_post thread has finished
[2025-06-03 17:03:27] 2025-06-03 20:53:04,527 | INFO     | [data] copytool_out thread has finished
[2025-06-03 17:03:27] 2025-06-03 20:53:04,547 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 17:03:27] 2025-06-03 20:53:04,655 | INFO     | [payload] control thread has finished
[2025-06-03 17:03:27] 2025-06-03 20:53:05,155 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:03:27] 2025-06-03 20:53:05,753 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 17:03:27] 2025-06-03 20:53:06,160 | INFO     | [job] queue monitor thread has finished
[2025-06-03 17:03:27] 2025-06-03 20:53:09,760 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 17:03:27] 2025-06-03 20:53:10,025 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139736124483392)>', '<ExcThread(monitor, started 139735402010368)>']
[2025-06-03 17:03:27] 2025-06-03 20:53:10,515 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 17:03:27] 2025-06-03 20:53:10,515 | INFO     | [monitor] control thread has ended
[2025-06-03 17:03:27] 2025-06-03 20:53:15,050 | INFO     | all workflow threads have been joined
[2025-06-03 17:03:27] 2025-06-03 20:53:15,050 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 17:03:27] 2025-06-03 20:53:15,051 | INFO     | traces error code: 0
[2025-06-03 17:03:27] 2025-06-03 20:53:15,051 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 17:03:27] 2025-06-03 20:53:15,212 [wrapper] ==== pilot stdout END ====
[2025-06-03 17:03:27] 2025-06-03 20:53:15,215 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 17:03:27] 2025-06-03 20:53:15,217 [wrapper] pilotpid: 3995062
[2025-06-03 17:03:27] 2025-06-03 20:53:15,220 [wrapper] Pilot exit status: 0
[2025-06-03 17:03:27] 2025-06-03 20:53:15,228 [wrapper] pandaids: 6677677378
[2025-06-03 17:03:27] 2025-06-03 20:53:15,297 [wrapper] cleanup supervisor_pilot 1097424 3995063
[2025-06-03 17:03:27] 2025-06-03 20:53:15,300 [wrapper] Test setup, not cleaning
[2025-06-03 17:03:27] 2025-06-03 20:53:15,303 [wrapper] apfmon messages muted
[2025-06-03 17:03:27] 2025-06-03 20:53:15,305 [wrapper] ==== wrapper stdout END ====
[2025-06-03 17:03:27] 2025-06-03 20:53:15,308 [wrapper] ==== wrapper stderr END ====
[2025-06-03 17:03:27]  *** Error codes and diagnostics ***
[2025-06-03 17:03:27]     "exeErrorCode": 0,
[2025-06-03 17:03:27]     "exeErrorDiag": "",
[2025-06-03 17:03:27]     "pilotErrorCode": 0,
[2025-06-03 17:03:27]     "pilotErrorDiag": "",
[2025-06-03 17:03:27]  *** Listing of results directory ***
[2025-06-03 17:03:27] total 388232
[2025-06-03 17:03:27] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 11:35 pilot3.tar.gz
[2025-06-03 17:03:27] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 11:39 queuedata.json
[2025-06-03 17:03:27] -rwx------. 1 boincer umatlas     37140 Jun  3 11:40 runpilot2-wrapper.sh
[2025-06-03 17:03:27] -rw-r--r--. 1 boincer umatlas       100 Jun  3 13:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 17:03:27] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 13:59 run_atlas
[2025-06-03 17:03:27] -rw-r--r--. 1 boincer umatlas       105 Jun  3 13:59 job.xml
[2025-06-03 17:03:27] -rw-r--r--. 2 boincer umatlas 218246925 Jun  3 13:59 EVNT.45006593._001494.pool.root.1
[2025-06-03 17:03:27] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:59 start_atlas.sh
[2025-06-03 17:03:27] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 13:59 shared
[2025-06-03 17:03:27] -rw-r--r--. 2 boincer umatlas    508878 Jun  3 13:59 input.tar.gz
[2025-06-03 17:03:27] -rw-r--r--. 1 boincer umatlas         0 Jun  3 13:59 boinc_lockfile
[2025-06-03 17:03:27] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 13:59 pandaJob.out
[2025-06-03 17:03:27] -rw-------. 1 boincer umatlas    985078 Jun  3 13:59 agis_schedconf.cvmfs.json
[2025-06-03 17:03:27] -rw-------. 1 boincer umatlas   1603667 Jun  3 13:59 agis_ddmendpoints.agis.ALL.json
[2025-06-03 17:03:27] drwx------. 4 boincer umatlas      4096 Jun  3 13:59 pilot3
[2025-06-03 17:03:27] -rw-r--r--. 1 boincer umatlas       529 Jun  3 16:52 boinc_task_state.xml
[2025-06-03 17:03:27] -rw-------. 1 boincer umatlas 172866821 Jun  3 16:52 HITS.45006595._037188.pool.root.1
[2025-06-03 17:03:27] -rw-------. 1 boincer umatlas        95 Jun  3 16:52 pilot_heartbeat.json
[2025-06-03 17:03:27] -rw-------. 1 boincer umatlas      1038 Jun  3 16:52 memory_monitor_summary.json
[2025-06-03 17:03:27] -rw-------. 1 boincer umatlas    358458 Jun  3 16:52 log.45006595._037188.job.log.tgz.1
[2025-06-03 17:03:27] -rw-------. 1 boincer umatlas      7714 Jun  3 16:53 heartbeat.json
[2025-06-03 17:03:27] -rw-------. 1 boincer umatlas      4353 Jun  3 16:53 pilotlog.txt
[2025-06-03 17:03:27] -rw-------. 1 boincer umatlas    945485 Jun  3 16:53 log.45006595._037188.job.log.1
[2025-06-03 17:03:27] -rw-------. 1 boincer umatlas       357 Jun  3 16:53 output.list
[2025-06-03 17:03:27] -rw-r--r--. 1 boincer umatlas       620 Jun  3 16:53 runtime_log
[2025-06-03 17:03:27] -rw-------. 1 boincer umatlas   1320960 Jun  3 16:53 result.tar.gz
[2025-06-03 17:03:27] -rw-r--r--. 1 boincer umatlas      8650 Jun  3 16:53 runtime_log.err
[2025-06-03 17:03:27] -rw-------. 1 boincer umatlas       653 Jun  3 16:53 9wMLDmEwig7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdrkKDmy9hyon.diag
[2025-06-03 17:03:27] -rw-r--r--. 1 boincer umatlas      6672 Jun  3 17:03 init_data.xml
[2025-06-03 17:03:27] -rw-r--r--. 1 boincer umatlas        26 Jun  3 17:03 wrapper_checkpoint.txt
[2025-06-03 17:03:27] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 17:03 boinc_mmap_file
[2025-06-03 17:03:27] -rw-r--r--. 1 boincer umatlas     20898 Jun  3 17:03 stderr.txt
[2025-06-03 17:03:27] HITS file was successfully produced:
[2025-06-03 17:03:27] -rw-------. 1 boincer umatlas 172866821 Jun  3 16:52 shared/HITS.pool.root.1
[2025-06-03 17:03:27]  *** Contents of shared directory: ***
[2025-06-03 17:03:27] total 383760
[2025-06-03 17:03:27] -rw-r--r--. 2 boincer umatlas 218246925 Jun  3 13:59 ATLAS.root_0
[2025-06-03 17:03:27] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:59 start_atlas.sh
[2025-06-03 17:03:27] -rw-r--r--. 2 boincer umatlas    508878 Jun  3 13:59 input.tar.gz
[2025-06-03 17:03:27] -rw-------. 1 boincer umatlas 172866821 Jun  3 16:52 HITS.pool.root.1
[2025-06-03 17:03:27] -rw-------. 1 boincer umatlas   1320960 Jun  3 16:53 result.tar.gz
17:03:29 (3991499): run_atlas exited; CPU time 40593.395867
17:03:29 (3991499): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN