Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:59:02 (1724598): wrapper (7.7.26015): starting
13:59:02 (1724598): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 13:59:02] Arguments: --nthreads 8
[2025-06-03 13:59:02] Threads: 8
[2025-06-03 13:59:02] Checking for CVMFS
[2025-06-03 13:59:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:59:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:59:02] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:59:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:59:03] 2.12.6.0 676006 22619 158272 146750 1 197 31601159 32503809 12905 16776704 0 287067731 99.693 212492684 36845 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 13:59:03] CVMFS is ok
[2025-06-03 13:59:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 13:59:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 13:59:03] Further information can be found at the LHC@home message board.
[2025-06-03 13:59:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:59:03] Checking for apptainer binary...
[2025-06-03 13:59:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:59:03] Running /usr/bin/apptainer --version
[2025-06-03 13:59:03] apptainer version 1.4.1-1.el9
[2025-06-03 13:59:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:59:03] c8-7-2.aglt2.org
[2025-06-03 13:59:03] apptainer works
[2025-06-03 13:59:03] Set ATHENA_PROC_NUMBER=8
[2025-06-03 13:59:03] Set ATHENA_CORE_NUMBER=8
[2025-06-03 13:59:03] Starting ATLAS job with PandaID=6677658151
[2025-06-03 13:59:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 14:50:33]  *** The last 200 lines of the pilot log: ***
[2025-06-03 14:50:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 14:50:33]  replicas=None
[2025-06-03 14:50:33]  scope=mc23_13p6TeV
[2025-06-03 14:50:33]  status=None
[2025-06-03 14:50:33]  status_code=0
[2025-06-03 14:50:33]  storage_token=
[2025-06-03 14:50:33]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6677658151/log.45006595._034949.job.log.tgz.1
[2025-06-03 14:50:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7b/31/log.45006595._034949.job.log.tgz.1
[2025-06-03 14:50:33]  workdir=None
[2025-06-03 14:50:33] ]
[2025-06-03 14:50:33] 2025-06-03 18:50:10,784 | INFO     | transferring file log.45006595._034949.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6677658151/log.45006595._034949.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 14:50:33] 2025-06-03 18:50:10,784 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6677658151/log.45006595._034949.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._034949.job
[2025-06-03 14:50:33] 2025-06-03 18:50:10,800 | INFO     | adding to output.list: log.45006595._034949.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7b/31/log.45006595._034949.job.log.tg
[2025-06-03 14:50:33] 2025-06-03 18:50:10,801 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 14:50:33] 2025-06-03 18:50:10,801 | INFO     | summary of transferred files:
[2025-06-03 14:50:33] 2025-06-03 18:50:10,801 | INFO     |  -- lfn=log.45006595._034949.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 14:50:33] 2025-06-03 18:50:10,801 | INFO     | stage-out finished correctly
[2025-06-03 14:50:33] 2025-06-03 18:50:11,455 | WARNING  | process 1744635 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 14:50:33] 2025-06-03 18:50:11,455 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677658151/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 14:50:33] 2025-06-03 18:50:11,888 | INFO     | number of running child processes to parent process 1744635: 1
[2025-06-03 14:50:33] 2025-06-03 18:50:11,889 | INFO     | maximum number of monitored processes: 6
[2025-06-03 14:50:33] 2025-06-03 18:50:13,165 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 14:50:33] 2025-06-03 18:50:14,392 | INFO     | monitor loop #220: job 0:6677658151 is in state 'finished'
[2025-06-03 14:50:33] 2025-06-03 18:50:14,393 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 14:50:33] 2025-06-03 18:50:15,812 | INFO     | job 6677658151 has state=finished
[2025-06-03 14:50:33] 2025-06-03 18:50:15,813 | INFO     | preparing for final server update for job 6677658151 in state='finished'
[2025-06-03 14:50:33] 2025-06-03 18:50:15,813 | INFO     | this job has now completed (state=finished)
[2025-06-03 14:50:33] 2025-06-03 18:50:15,813 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 14:50:33] 2025-06-03 18:50:15,813 | INFO     | log transfer has been attempted: DONE
[2025-06-03 14:50:33] 2025-06-03 18:50:15,813 | INFO     | job 6677658151 has finished - writing final server update
[2025-06-03 14:50:33] 2025-06-03 18:50:15,813 | INFO     | total number of processed events: 400 (read)
[2025-06-03 14:50:33] 2025-06-03 18:50:15,831 | INFO     | executing command: lscpu
[2025-06-03 14:50:33] 2025-06-03 18:50:15,918 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 14:50:33] 2025-06-03 18:50:16,896 | INFO     | monitor loop #221: job 0:6677658151 is in state 'finished'
[2025-06-03 14:50:33] 2025-06-03 18:50:16,896 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 14:50:33] 2025-06-03 18:50:19,399 | INFO     | monitor loop #222: job 0:6677658151 is in state 'finished'
[2025-06-03 14:50:33] 2025-06-03 18:50:19,399 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 14:50:33] 2025-06-03 18:50:19,533 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 14:50:33] 2025-06-03 18:50:19,533 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677658151/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 14:50:33] 2025-06-03 18:50:19,533 | INFO     | extracted standard info from prmon json
[2025-06-03 14:50:33] 2025-06-03 18:50:19,533 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 14:50:33] 2025-06-03 18:50:19,533 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 14:50:33] 2025-06-03 18:50:19,534 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 14:50:33] 2025-06-03 18:50:19,534 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 14:50:33] 2025-06-03 18:50:19,535 | INFO     | fitting pss+swap vs Time
[2025-06-03 14:50:33] 2025-06-03 18:50:19,535 | INFO     | sum of square deviations: 24640462.0
[2025-06-03 14:50:33] 2025-06-03 18:50:19,535 | INFO     | sum of deviations: 4914089728.0
[2025-06-03 14:50:33] 2025-06-03 18:50:19,535 | INFO     | mean x: 1748975161.0
[2025-06-03 14:50:33] 2025-06-03 18:50:19,535 | INFO     | mean y: 2063340.0232558139
[2025-06-03 14:50:33] 2025-06-03 18:50:19,535 | INFO     | -- intersect: -348799061947.20746
[2025-06-03 14:50:33] 2025-06-03 18:50:19,535 | INFO     | intersect: -348799061947.20746
[2025-06-03 14:50:33] 2025-06-03 18:50:19,535 | INFO     | chi2: 0.7276803414841855
[2025-06-03 14:50:33] 2025-06-03 18:50:19,535 | INFO     | -- intersect: -348799061947.20746
[2025-06-03 14:50:33] 2025-06-03 18:50:19,535 | INFO     | current memory leak: 199.43 B/s (using 43 data points, chi2=0.73)
[2025-06-03 14:50:33] 2025-06-03 18:50:19,535 | INFO     | ..............................
[2025-06-03 14:50:33] 2025-06-03 18:50:19,536 | INFO     | . Timing measurements:
[2025-06-03 14:50:33] 2025-06-03 18:50:19,536 | INFO     | . get job = 0 s
[2025-06-03 14:50:33] 2025-06-03 18:50:19,536 | INFO     | . initial setup = 2 s
[2025-06-03 14:50:33] 2025-06-03 18:50:19,536 | INFO     | . payload setup = 5 s
[2025-06-03 14:50:33] 2025-06-03 18:50:19,536 | INFO     | . stage-in = 0 s
[2025-06-03 14:50:33] 2025-06-03 18:50:19,536 | INFO     | . payload execution = 3034 s
[2025-06-03 14:50:33] 2025-06-03 18:50:19,536 | INFO     | . stage-out = 0 s
[2025-06-03 14:50:33] 2025-06-03 18:50:19,536 | INFO     | . log creation = 0 s
[2025-06-03 14:50:33] 2025-06-03 18:50:19,536 | INFO     | ..............................
[2025-06-03 14:50:33] 2025-06-03 18:50:19,594 | INFO     | 
[2025-06-03 14:50:33] 2025-06-03 18:50:19,594 | INFO     | job summary report
[2025-06-03 14:50:33] 2025-06-03 18:50:19,594 | INFO     | --------------------------------------------------
[2025-06-03 14:50:33] 2025-06-03 18:50:19,594 | INFO     | PanDA job id: 6677658151
[2025-06-03 14:50:33] 2025-06-03 18:50:19,594 | INFO     | task id: 45006595
[2025-06-03 14:50:33] 2025-06-03 18:50:19,595 | INFO     | errors: (none)
[2025-06-03 14:50:33] 2025-06-03 18:50:19,595 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 14:50:33] 2025-06-03 18:50:19,595 | INFO     | pilot state: finished 
[2025-06-03 14:50:33] 2025-06-03 18:50:19,595 | INFO     | transexitcode: 0
[2025-06-03 14:50:33] 2025-06-03 18:50:19,595 | INFO     | exeerrorcode: 0
[2025-06-03 14:50:33] 2025-06-03 18:50:19,595 | INFO     | exeerrordiag: 
[2025-06-03 14:50:33] 2025-06-03 18:50:19,595 | INFO     | exitcode: 0
[2025-06-03 14:50:33] 2025-06-03 18:50:19,595 | INFO     | exitmsg: OK
[2025-06-03 14:50:33] 2025-06-03 18:50:19,595 | INFO     | cpuconsumptiontime: 19400 s
[2025-06-03 14:50:33] 2025-06-03 18:50:19,595 | INFO     | nevents: 400
[2025-06-03 14:50:33] 2025-06-03 18:50:19,595 | INFO     | neventsw: 0
[2025-06-03 14:50:33] 2025-06-03 18:50:19,595 | INFO     | pid: 1744635
[2025-06-03 14:50:33] 2025-06-03 18:50:19,595 | INFO     | pgrp: 1744635
[2025-06-03 14:50:33] 2025-06-03 18:50:19,595 | INFO     | corecount: 8
[2025-06-03 14:50:33] 2025-06-03 18:50:19,595 | INFO     | event service: False
[2025-06-03 14:50:33] 2025-06-03 18:50:19,595 | INFO     | sizes: {0: 2405184, 3: 2405390, 11: 2405418, 3043: 2430834, 3045: 2439775, 3047: 2439831, 3054: 2440129}
[2025-06-03 14:50:33] 2025-06-03 18:50:19,595 | INFO     | --------------------------------------------------
[2025-06-03 14:50:33] 2025-06-03 18:50:19,595 | INFO     | 
[2025-06-03 14:50:33] 2025-06-03 18:50:19,595 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-03 14:50:33] 2025-06-03 18:50:19,613 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 14:50:33] 2025-06-03 18:50:19,614 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 14:50:33] 2025-06-03 18:50:19,614 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 14:50:33] 2025-06-03 18:50:19,614 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 14:50:33] 2025-06-03 18:50:19,614 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 14:50:33] 2025-06-03 18:50:19,614 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 14:50:33] 2025-06-03 18:50:19,614 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 14:50:33] 2025-06-03 18:50:19,614 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 14:50:33] 2025-06-03 18:50:19,614 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 14:50:33] 2025-06-03 18:50:19,614 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 14:50:33] 2025-06-03 18:50:19,614 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 14:50:33] 2025-06-03 18:50:19,614 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 14:50:33] 2025-06-03 18:50:19,614 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 14:50:33] 2025-06-03 18:50:19,614 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 14:50:33] 2025-06-03 18:50:19,614 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 14:50:33] 2025-06-03 18:50:19,614 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 14:50:33] 2025-06-03 18:50:19,614 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 14:50:33] 2025-06-03 18:50:19,614 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 14:50:33] 2025-06-03 18:50:19,614 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 14:50:33] 2025-06-03 18:50:19,614 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 14:50:33] 2025-06-03 18:50:19,614 | INFO     | job 6677658151 has completed (purged errors)
[2025-06-03 14:50:33] 2025-06-03 18:50:19,615 | INFO     | overall cleanup function is called
[2025-06-03 14:50:33] 2025-06-03 18:50:20,622 | INFO     | --- collectZombieJob: --- 10, [1744635]
[2025-06-03 14:50:33] 2025-06-03 18:50:20,622 | INFO     | zombie collector waiting for pid 1744635
[2025-06-03 14:50:33] 2025-06-03 18:50:20,622 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 14:50:33] 2025-06-03 18:50:20,622 | INFO     | collected zombie processes
[2025-06-03 14:50:33] 2025-06-03 18:50:20,622 | INFO     | will attempt to kill all subprocesses of pid=1744635
[2025-06-03 14:50:33] 2025-06-03 18:50:21,051 | INFO     | process IDs to be killed: [1744635] (in reverse order)
[2025-06-03 14:50:33] 2025-06-03 18:50:21,203 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 14:50:33] 2025-06-03 18:50:21,203 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 14:50:33] 2025-06-03 18:50:21,224 | INFO     | did not find any defunct processes belonging to 1744635
[2025-06-03 14:50:33] 2025-06-03 18:50:21,242 | INFO     | did not find any defunct processes belonging to 1744635
[2025-06-03 14:50:33] 2025-06-03 18:50:21,242 | INFO     | ready for new job
[2025-06-03 14:50:33] 2025-06-03 18:50:21,242 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 14:50:33] 2025-06-03 18:50:21,243 | INFO     | **************************************
[2025-06-03 14:50:33] 2025-06-03 18:50:21,243 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 14:50:33] 2025-06-03 18:50:21,243 | INFO     | **************************************
[2025-06-03 14:50:33] 2025-06-03 18:50:21,243 | INFO     | 
[2025-06-03 14:50:33] 2025-06-03 18:50:21,259 | INFO     | architecture information:
[2025-06-03 14:50:33] 2025-06-03 18:50:21,260 | INFO     | executing command: cat /etc/os-release
[2025-06-03 14:50:33] 2025-06-03 18:50:21,273 | INFO     | cat /etc/os-release:
[2025-06-03 14:50:33] NAME="CentOS Linux"
[2025-06-03 14:50:33] VERSION="7 (Core)"
[2025-06-03 14:50:33] ID="centos"
[2025-06-03 14:50:33] ID_LIKE="rhel fedora"
[2025-06-03 14:50:33] VERSION_ID="7"
[2025-06-03 14:50:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 14:50:33] ANSI_COLOR="0;31"
[2025-06-03 14:50:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 14:50:33] HOME_URL="https://www.centos.org/"
[2025-06-03 14:50:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 14:50:33] 
[2025-06-03 14:50:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 14:50:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 14:50:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 14:50:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 14:50:33] 
[2025-06-03 14:50:33] 2025-06-03 18:50:21,273 | INFO     | **************************************
[2025-06-03 14:50:33] 2025-06-03 18:50:21,776 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-03 14:50:33] 2025-06-03 18:50:21,790 | INFO     | sufficient remaining disk space (88700092416 B)
[2025-06-03 14:50:33] 2025-06-03 18:50:21,790 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 14:50:33] 2025-06-03 18:50:21,790 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 14:50:33] 2025-06-03 18:50:21,790 | INFO     | update_server=False
[2025-06-03 14:50:33] 2025-06-03 18:50:21,790 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 14:50:33] 2025-06-03 18:50:21,790 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 14:50:33] 2025-06-03 18:50:21,902 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 14:50:33] 2025-06-03 18:50:21,902 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 14:50:33] 2025-06-03 18:50:21,902 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:50:33] 2025-06-03 18:50:21,902 | INFO     | will abort loop
[2025-06-03 14:50:33] 2025-06-03 18:50:22,019 | INFO     | all payload control threads have been joined
[2025-06-03 14:50:33] 2025-06-03 18:50:22,467 | INFO     | all data control threads have been joined
[2025-06-03 14:50:33] 2025-06-03 18:50:22,614 | INFO     | all job control threads have been joined
[2025-06-03 14:50:33] 2025-06-03 18:50:22,796 | INFO     | [job] retrieve thread has finished
[2025-06-03 14:50:33] 2025-06-03 18:50:22,908 | INFO     | [job] job monitor thread has finished
[2025-06-03 14:50:33] 2025-06-03 18:50:22,967 | INFO     | [job] validate thread has finished
[2025-06-03 14:50:33] 2025-06-03 18:50:23,012 | INFO     | PID=1728272 has CPU usage=11.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-03 14:50:33] 2025-06-03 18:50:23,013 | INFO     | .. there are 21 such processes running
[2025-06-03 14:50:33] 2025-06-03 18:50:23,013 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 14:50:33] 2025-06-03 18:50:23,013 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 14:50:33] 2025-06-03 18:50:23,013 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 14:50:33] 2025-06-03 18:50:23,021 | INFO     | [payload] control thread has finished
[2025-06-03 14:50:33] 2025-06-03 18:50:23,129 | INFO     | [payload] validate_post thread has finished
[2025-06-03 14:50:33] 2025-06-03 18:50:23,146 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 14:50:33] 2025-06-03 18:50:23,161 | INFO     | [payload] failed_post thread has finished
[2025-06-03 14:50:33] 2025-06-03 18:50:23,385 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 14:50:33] 2025-06-03 18:50:23,473 | INFO     | [data] control thread has finished
[2025-06-03 14:50:33] 2025-06-03 18:50:23,533 | INFO     | [data] copytool_in thread has finished
[2025-06-03 14:50:33] 2025-06-03 18:50:23,617 | INFO     | [job] control thread has finished
[2025-06-03 14:50:33] 2025-06-03 18:50:23,730 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 14:50:33] 2025-06-03 18:50:23,781 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 14:50:33] 2025-06-03 18:50:23,793 | INFO     | [data] copytool_out thread has finished
[2025-06-03 14:50:33] 2025-06-03 18:50:23,823 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 14:50:33] 2025-06-03 18:50:24,605 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:50:33] 2025-06-03 18:50:25,611 | INFO     | [job] queue monitor thread has finished
[2025-06-03 14:50:33] 2025-06-03 18:50:27,736 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 14:50:33] 2025-06-03 18:50:28,559 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140351096031040)>', '<ExcThread(monitor, started 140350446356224)>']
[2025-06-03 14:50:33] 2025-06-03 18:50:29,041 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 14:50:33] 2025-06-03 18:50:29,041 | INFO     | [monitor] control thread has ended
[2025-06-03 14:50:33] 2025-06-03 18:50:33,584 | INFO     | all workflow threads have been joined
[2025-06-03 14:50:33] 2025-06-03 18:50:33,584 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 14:50:33] 2025-06-03 18:50:33,584 | INFO     | traces error code: 0
[2025-06-03 14:50:33] 2025-06-03 18:50:33,584 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 14:50:33] 2025-06-03 18:50:33,687 [wrapper] ==== pilot stdout END ====
[2025-06-03 14:50:33] 2025-06-03 18:50:33,689 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 14:50:33] 2025-06-03 18:50:33,691 [wrapper] pilotpid: 1728272
[2025-06-03 14:50:33] 2025-06-03 18:50:33,692 [wrapper] Pilot exit status: 0
[2025-06-03 14:50:33] 2025-06-03 18:50:33,700 [wrapper] pandaids: 6677658151
[2025-06-03 14:50:33] 2025-06-03 18:50:33,808 [wrapper] cleanup supervisor_pilot 2734709 1728273
[2025-06-03 14:50:33] 2025-06-03 18:50:33,811 [wrapper] Test setup, not cleaning
[2025-06-03 14:50:33] 2025-06-03 18:50:33,814 [wrapper] apfmon messages muted
[2025-06-03 14:50:33] 2025-06-03 18:50:33,816 [wrapper] ==== wrapper stdout END ====
[2025-06-03 14:50:33] 2025-06-03 18:50:33,819 [wrapper] ==== wrapper stderr END ====
[2025-06-03 14:50:33]  *** Error codes and diagnostics ***
[2025-06-03 14:50:33]     "exeErrorCode": 0,
[2025-06-03 14:50:33]     "exeErrorDiag": "",
[2025-06-03 14:50:33]     "pilotErrorCode": 0,
[2025-06-03 14:50:33]     "pilotErrorDiag": "",
[2025-06-03 14:50:33]  *** Listing of results directory ***
[2025-06-03 14:50:33] total 390376
[2025-06-03 14:50:33] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 10:09 pilot3.tar.gz
[2025-06-03 14:50:33] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 10:10 queuedata.json
[2025-06-03 14:50:33] -rwx------. 1 boincer umatlas     37140 Jun  3 10:10 runpilot2-wrapper.sh
[2025-06-03 14:50:33] -rw-r--r--. 1 boincer umatlas       100 Jun  3 13:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 14:50:33] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 13:59 run_atlas
[2025-06-03 14:50:33] -rw-r--r--. 1 boincer umatlas       105 Jun  3 13:59 job.xml
[2025-06-03 14:50:33] -rw-r--r--. 2 boincer umatlas 213422031 Jun  3 13:59 EVNT.45006593._001405.pool.root.1
[2025-06-03 14:50:33] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:59 start_atlas.sh
[2025-06-03 14:50:33] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 13:59 shared
[2025-06-03 14:50:33] -rw-r--r--. 2 boincer umatlas    508882 Jun  3 13:59 input.tar.gz
[2025-06-03 14:50:33] -rw-r--r--. 1 boincer umatlas         0 Jun  3 13:59 boinc_lockfile
[2025-06-03 14:50:33] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 13:59 pandaJob.out
[2025-06-03 14:50:33] -rw-------. 1 boincer umatlas    985078 Jun  3 13:59 agis_schedconf.cvmfs.json
[2025-06-03 14:50:33] -rw-------. 1 boincer umatlas   1603667 Jun  3 13:59 agis_ddmendpoints.agis.ALL.json
[2025-06-03 14:50:33] drwx------. 4 boincer umatlas      4096 Jun  3 13:59 pilot3
[2025-06-03 14:50:33] -rw-r--r--. 1 boincer umatlas      7160 Jun  3 14:45 init_data.xml
[2025-06-03 14:50:33] -rw-------. 1 boincer umatlas 181292166 Jun  3 14:49 HITS.45006595._034949.pool.root.1
[2025-06-03 14:50:33] -rw-r--r--. 1 boincer umatlas       530 Jun  3 14:49 boinc_task_state.xml
[2025-06-03 14:50:33] -rw-------. 1 boincer umatlas      1033 Jun  3 14:50 memory_monitor_summary.json
[2025-06-03 14:50:33] -rw-------. 1 boincer umatlas    283577 Jun  3 14:50 log.45006595._034949.job.log.tgz.1
[2025-06-03 14:50:33] -rw-------. 1 boincer umatlas        95 Jun  3 14:50 pilot_heartbeat.json
[2025-06-03 14:50:33] -rw-------. 1 boincer umatlas      7686 Jun  3 14:50 heartbeat.json
[2025-06-03 14:50:33] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 14:50 boinc_mmap_file
[2025-06-03 14:50:33] -rw-r--r--. 1 boincer umatlas        27 Jun  3 14:50 wrapper_checkpoint.txt
[2025-06-03 14:50:33] -rw-------. 1 boincer umatlas      4935 Jun  3 14:50 pilotlog.txt
[2025-06-03 14:50:33] -rw-------. 1 boincer umatlas    315975 Jun  3 14:50 log.45006595._034949.job.log.1
[2025-06-03 14:50:33] -rw-------. 1 boincer umatlas       357 Jun  3 14:50 output.list
[2025-06-03 14:50:33] -rw-r--r--. 1 boincer umatlas       620 Jun  3 14:50 runtime_log
[2025-06-03 14:50:33] -rw-------. 1 boincer umatlas    614400 Jun  3 14:50 result.tar.gz
[2025-06-03 14:50:33] -rw-------. 1 boincer umatlas       649 Jun  3 14:50 vsLODm0Whg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtUkKDm4d8cMm.diag
[2025-06-03 14:50:33] -rw-r--r--. 1 boincer umatlas      8649 Jun  3 14:50 runtime_log.err
[2025-06-03 14:50:33] -rw-r--r--. 1 boincer umatlas     21909 Jun  3 14:50 stderr.txt
[2025-06-03 14:50:33] HITS file was successfully produced:
[2025-06-03 14:50:33] -rw-------. 1 boincer umatlas 181292166 Jun  3 14:49 shared/HITS.pool.root.1
[2025-06-03 14:50:33]  *** Contents of shared directory: ***
[2025-06-03 14:50:33] total 386588
[2025-06-03 14:50:33] -rw-r--r--. 2 boincer umatlas 213422031 Jun  3 13:59 ATLAS.root_0
[2025-06-03 14:50:33] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:59 start_atlas.sh
[2025-06-03 14:50:33] -rw-r--r--. 2 boincer umatlas    508882 Jun  3 13:59 input.tar.gz
[2025-06-03 14:50:33] -rw-------. 1 boincer umatlas 181292166 Jun  3 14:49 HITS.pool.root.1
[2025-06-03 14:50:33] -rw-------. 1 boincer umatlas    614400 Jun  3 14:50 result.tar.gz
14:50:35 (1724598): run_atlas exited; CPU time 19477.803977
14:50:35 (1724598): called boinc_finish(0)

</stderr_txt>
]]>

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