Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:53:27 (29183): wrapper (7.7.26015): starting
05:53:27 (29183): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 05:53:27] Arguments: --nthreads 8
[2025-06-04 05:53:27] Threads: 8
[2025-06-04 05:53:27] Checking for CVMFS
[2025-06-04 05:53:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 05:53:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 05:53:28] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 05:53:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 05:53:29] 2.11.2.0 14280 32693 95852 146766 1 114 18146840 25165824 3241 130560 0 17211878 99.793 17407919 1894 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 05:53:29] CVMFS is ok
[2025-06-04 05:53:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 05:53:29] Checking for apptainer binary...
[2025-06-04 05:53:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 05:53:29] Running /usr/bin/apptainer --version
[2025-06-04 05:53:29] apptainer version 1.3.2-1.el7
[2025-06-04 05:53:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 05:53:30] cg-vwn302.simple-grid.lan
[2025-06-04 05:53:30] apptainer works
[2025-06-04 05:53:30] Set ATHENA_PROC_NUMBER=8
[2025-06-04 05:53:30] Set ATHENA_CORE_NUMBER=8
[2025-06-04 05:53:30] Starting ATLAS job with PandaID=6677677254
[2025-06-04 05:53:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:27:15]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:27:15] 2025-06-04 07:26:59,536 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:27:15] 2025-06-04 07:26:59,536 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:27:15] 2025-06-04 07:26:59,536 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:27:15] 2025-06-04 07:26:59,537 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:27:15] 2025-06-04 07:26:59,542 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:27:15] 2025-06-04 07:26:59,542 | INFO     | sum of square deviations: 2830787960.0
[2025-06-04 09:27:15] 2025-06-04 07:26:59,544 | INFO     | sum of deviations: -29983343542.0
[2025-06-04 09:27:15] 2025-06-04 07:26:59,544 | INFO     | mean x: 1749015637.0
[2025-06-04 09:27:15] 2025-06-04 07:26:59,544 | INFO     | mean y: 2508092.942583732
[2025-06-04 09:27:15] 2025-06-04 07:26:59,545 | INFO     | -- intersect: 18527857728.985607
[2025-06-04 09:27:15] 2025-06-04 07:26:59,545 | INFO     | intersect: 18527857728.985607
[2025-06-04 09:27:15] 2025-06-04 07:26:59,545 | INFO     | chi2: 2.843158153425204
[2025-06-04 09:27:15] 2025-06-04 07:26:59,546 | INFO     | sum of square deviations: 2632440055.0
[2025-06-04 09:27:15] 2025-06-04 07:26:59,547 | INFO     | sum of deviations: -15161612708.000002
[2025-06-04 09:27:15] 2025-06-04 07:26:59,547 | INFO     | mean x: 1749015484.5
[2025-06-04 09:27:15] 2025-06-04 07:26:59,548 | INFO     | mean y: 2519283.843137255
[2025-06-04 09:27:15] 2025-06-04 07:26:59,548 | INFO     | -- intersect: 10076023273.389437
[2025-06-04 09:27:15] 2025-06-04 07:26:59,548 | INFO     | intersect: 10076023273.389437
[2025-06-04 09:27:15] 2025-06-04 07:26:59,548 | INFO     | chi2: 2.080024469063214
[2025-06-04 09:27:15] 2025-06-04 07:26:59,548 | INFO     | current chi2=2.080024469063214 (change=26.84105643024568 %)
[2025-06-04 09:27:15] 2025-06-04 07:26:59,549 | INFO     | sum of square deviations: 2443580700.0
[2025-06-04 09:27:15] 2025-06-04 07:26:59,551 | INFO     | sum of deviations: -14210634786.0
[2025-06-04 09:27:15] 2025-06-04 07:26:59,551 | INFO     | mean x: 1749015332.0
[2025-06-04 09:27:15] 2025-06-04 07:26:59,551 | INFO     | mean y: 2520051.944723618
[2025-06-04 09:27:15] 2025-06-04 07:26:59,551 | INFO     | -- intersect: 10173912434.511232
[2025-06-04 09:27:15] 2025-06-04 07:26:59,551 | INFO     | intersect: 10173912434.511232
[2025-06-04 09:27:15] 2025-06-04 07:26:59,552 | INFO     | chi2: 2.0796562358396877
[2025-06-04 09:27:15] 2025-06-04 07:26:59,552 | INFO     | current chi2=2.0796562358396877 (change=0.017703312100555976 %)
[2025-06-04 09:27:15] 2025-06-04 07:26:59,552 | INFO     | right removable region: 198
[2025-06-04 09:27:15] 2025-06-04 07:26:59,552 | INFO     | sum of square deviations: 2632440055.0
[2025-06-04 09:27:15] 2025-06-04 07:26:59,554 | INFO     | sum of deviations: -69371019843.5
[2025-06-04 09:27:15] 2025-06-04 07:26:59,554 | INFO     | mean x: 1749015789.5
[2025-06-04 09:27:15] 2025-06-04 07:26:59,554 | INFO     | mean y: 2538125.838235294
[2025-06-04 09:27:15] 2025-06-04 07:26:59,554 | INFO     | -- intersect: 46093239720.18064
[2025-06-04 09:27:15] 2025-06-04 07:26:59,554 | INFO     | intersect: 46093239720.18064
[2025-06-04 09:27:15] 2025-06-04 07:26:59,555 | INFO     | chi2: 1.015976099463492
[2025-06-04 09:27:15] 2025-06-04 07:26:59,555 | INFO     | current chi2=1.015976099463492 (change=64.2659308895804 %)
[2025-06-04 09:27:15] 2025-06-04 07:26:59,556 | INFO     | sum of square deviations: 2443580700.0
[2025-06-04 09:27:15] 2025-06-04 07:26:59,557 | INFO     | sum of deviations: -69724495293.0
[2025-06-04 09:27:15] 2025-06-04 07:26:59,557 | INFO     | mean x: 1749015942.0
[2025-06-04 09:27:15] 2025-06-04 07:26:59,557 | INFO     | mean y: 2538369.4271356785
[2025-06-04 09:27:15] 2025-06-04 07:26:59,558 | INFO     | -- intersect: 49908503748.577896
[2025-06-04 09:27:15] 2025-06-04 07:26:59,558 | INFO     | intersect: 49908503748.577896
[2025-06-04 09:27:15] 2025-06-04 07:26:59,558 | INFO     | chi2: 0.9865292466296622
[2025-06-04 09:27:15] 2025-06-04 07:26:59,558 | INFO     | current chi2=0.9865292466296622 (change=2.898380468731489 %)
[2025-06-04 09:27:15] 2025-06-04 07:26:59,558 | INFO     | left removable region: 20
[2025-06-04 09:27:15] 2025-06-04 07:26:59,559 | INFO     | sum of square deviations: 1748737904.5
[2025-06-04 09:27:15] 2025-06-04 07:26:59,560 | INFO     | sum of deviations: -41816439552.49999
[2025-06-04 09:27:15] 2025-06-04 07:26:59,560 | INFO     | mean x: 1749015911.5
[2025-06-04 09:27:15] 2025-06-04 07:26:59,561 | INFO     | mean y: 2542422.7359550563
[2025-06-04 09:27:15] 2025-06-04 07:26:59,561 | INFO     | -- intersect: 41825629776.991005
[2025-06-04 09:27:15] 2025-06-04 07:26:59,561 | INFO     | intersect: 41825629776.991005
[2025-06-04 09:27:15] 2025-06-04 07:26:59,561 | INFO     | chi2: 0.18008068784431067
[2025-06-04 09:27:15] 2025-06-04 07:26:59,561 | INFO     | -- intersect: 41825629776.991005
[2025-06-04 09:27:15] 2025-06-04 07:26:59,561 | INFO     | current memory leak: -23.91 B/s (using 178 data points, chi2=0.18)
[2025-06-04 09:27:15] 2025-06-04 07:26:59,563 | INFO     | ..............................
[2025-06-04 09:27:15] 2025-06-04 07:26:59,563 | INFO     | . Timing measurements:
[2025-06-04 09:27:15] 2025-06-04 07:26:59,563 | INFO     | . get job = 0 s
[2025-06-04 09:27:15] 2025-06-04 07:26:59,563 | INFO     | . initial setup = 2 s
[2025-06-04 09:27:15] 2025-06-04 07:26:59,563 | INFO     | . payload setup = 14 s
[2025-06-04 09:27:15] 2025-06-04 07:26:59,563 | INFO     | . stage-in = 0 s
[2025-06-04 09:27:15] 2025-06-04 07:26:59,563 | INFO     | . payload execution = 12736 s
[2025-06-04 09:27:15] 2025-06-04 07:26:59,563 | INFO     | . stage-out = 1 s
[2025-06-04 09:27:15] 2025-06-04 07:26:59,564 | INFO     | . log creation = 0 s
[2025-06-04 09:27:15] 2025-06-04 07:26:59,564 | INFO     | ..............................
[2025-06-04 09:27:15] 2025-06-04 07:26:59,694 | INFO     | 
[2025-06-04 09:27:15] 2025-06-04 07:26:59,695 | INFO     | job summary report
[2025-06-04 09:27:15] 2025-06-04 07:26:59,695 | INFO     | --------------------------------------------------
[2025-06-04 09:27:15] 2025-06-04 07:26:59,695 | INFO     | PanDA job id: 6677677254
[2025-06-04 09:27:15] 2025-06-04 07:26:59,695 | INFO     | task id: 45006595
[2025-06-04 09:27:15] 2025-06-04 07:26:59,695 | INFO     | errors: (none)
[2025-06-04 09:27:15] 2025-06-04 07:26:59,695 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:27:15] 2025-06-04 07:26:59,695 | INFO     | pilot state: finished 
[2025-06-04 09:27:15] 2025-06-04 07:26:59,696 | INFO     | transexitcode: 0
[2025-06-04 09:27:15] 2025-06-04 07:26:59,696 | INFO     | exeerrorcode: 0
[2025-06-04 09:27:15] 2025-06-04 07:26:59,696 | INFO     | exeerrordiag: 
[2025-06-04 09:27:15] 2025-06-04 07:26:59,696 | INFO     | exitcode: 0
[2025-06-04 09:27:15] 2025-06-04 07:26:59,696 | INFO     | exitmsg: OK
[2025-06-04 09:27:15] 2025-06-04 07:26:59,696 | INFO     | cpuconsumptiontime: 48709 s
[2025-06-04 09:27:15] 2025-06-04 07:26:59,696 | INFO     | nevents: 400
[2025-06-04 09:27:15] 2025-06-04 07:26:59,696 | INFO     | neventsw: 0
[2025-06-04 09:27:15] 2025-06-04 07:26:59,696 | INFO     | pid: 9031
[2025-06-04 09:27:15] 2025-06-04 07:26:59,696 | INFO     | pgrp: 9031
[2025-06-04 09:27:15] 2025-06-04 07:26:59,696 | INFO     | corecount: 8
[2025-06-04 09:27:15] 2025-06-04 07:26:59,697 | INFO     | event service: False
[2025-06-04 09:27:15] 2025-06-04 07:26:59,697 | INFO     | sizes: {0: 2404356, 1: 2405041, 2: 2405240, 10: 2405446, 13: 2405474, 12754: 2434848, 12756: 2443789, 12759: 2443845, 12769: 2444015}
[2025-06-04 09:27:15] 2025-06-04 07:26:59,697 | INFO     | --------------------------------------------------
[2025-06-04 09:27:15] 2025-06-04 07:26:59,697 | INFO     | 
[2025-06-04 09:27:15] 2025-06-04 07:26:59,697 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-06-04 09:27:15] 2025-06-04 07:26:59,745 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:27:15] 2025-06-04 07:26:59,745 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:27:15] 2025-06-04 07:26:59,745 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:27:15] 2025-06-04 07:26:59,745 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:27:15] 2025-06-04 07:26:59,745 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:27:15] 2025-06-04 07:26:59,746 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:27:15] 2025-06-04 07:26:59,746 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:27:15] 2025-06-04 07:26:59,746 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:27:15] 2025-06-04 07:26:59,746 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:27:15] 2025-06-04 07:26:59,746 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:27:15] 2025-06-04 07:26:59,746 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:27:15] 2025-06-04 07:26:59,746 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:27:15] 2025-06-04 07:26:59,746 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:27:15] 2025-06-04 07:26:59,746 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:27:15] 2025-06-04 07:26:59,746 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:27:15] 2025-06-04 07:26:59,747 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:27:15] 2025-06-04 07:26:59,747 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:27:15] 2025-06-04 07:26:59,747 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:27:15] 2025-06-04 07:26:59,747 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:27:15] 2025-06-04 07:26:59,747 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:27:15] 2025-06-04 07:26:59,747 | INFO     | job 6677677254 has completed (purged errors)
[2025-06-04 09:27:15] 2025-06-04 07:26:59,747 | INFO     | overall cleanup function is called
[2025-06-04 09:27:15] 2025-06-04 07:27:00,262 | INFO     | PID=426 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-06-04 09:27:15] 2025-06-04 07:27:00,262 | INFO     | .. there are 9 such processes running
[2025-06-04 09:27:15] 2025-06-04 07:27:00,756 | INFO     | --- collectZombieJob: --- 10, [9031]
[2025-06-04 09:27:15] 2025-06-04 07:27:00,757 | INFO     | zombie collector waiting for pid 9031
[2025-06-04 09:27:15] 2025-06-04 07:27:00,757 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:27:15] 2025-06-04 07:27:00,757 | INFO     | collected zombie processes
[2025-06-04 09:27:15] 2025-06-04 07:27:00,757 | INFO     | will attempt to kill all subprocesses of pid=9031
[2025-06-04 09:27:15] 2025-06-04 07:27:00,864 | INFO     | process IDs to be killed: [9031] (in reverse order)
[2025-06-04 09:27:15] 2025-06-04 07:27:01,011 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:27:15] 2025-06-04 07:27:01,012 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:27:15] 2025-06-04 07:27:01,015 | INFO     | did not find any defunct processes belonging to 9031
[2025-06-04 09:27:15] 2025-06-04 07:27:01,019 | INFO     | did not find any defunct processes belonging to 9031
[2025-06-04 09:27:15] 2025-06-04 07:27:01,020 | INFO     | ready for new job
[2025-06-04 09:27:15] 2025-06-04 07:27:01,020 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:27:15] 2025-06-04 07:27:01,022 | INFO     | **************************************
[2025-06-04 09:27:15] 2025-06-04 07:27:01,022 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:27:15] 2025-06-04 07:27:01,022 | INFO     | **************************************
[2025-06-04 09:27:15] 2025-06-04 07:27:01,022 | INFO     | 
[2025-06-04 09:27:15] 2025-06-04 07:27:01,023 | INFO     | pilot is running in a VM
[2025-06-04 09:27:15] 2025-06-04 07:27:01,023 | INFO     | architecture information:
[2025-06-04 09:27:15] 2025-06-04 07:27:01,024 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:27:15] 2025-06-04 07:27:01,053 | INFO     | cat /etc/os-release:
[2025-06-04 09:27:15] NAME="CentOS Linux"
[2025-06-04 09:27:15] VERSION="7 (Core)"
[2025-06-04 09:27:15] ID="centos"
[2025-06-04 09:27:15] ID_LIKE="rhel fedora"
[2025-06-04 09:27:15] VERSION_ID="7"
[2025-06-04 09:27:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:27:15] ANSI_COLOR="0;31"
[2025-06-04 09:27:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:27:15] HOME_URL="https://www.centos.org/"
[2025-06-04 09:27:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:27:15] 
[2025-06-04 09:27:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:27:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:27:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:27:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:27:15] 
[2025-06-04 09:27:15] 2025-06-04 07:27:01,053 | INFO     | **************************************
[2025-06-04 09:27:15] 2025-06-04 07:27:01,557 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-06-04 09:27:15] 2025-06-04 07:27:01,609 | INFO     | sufficient remaining disk space (497198039040 B)
[2025-06-04 09:27:15] 2025-06-04 07:27:01,609 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:27:15] 2025-06-04 07:27:01,609 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:27:15] 2025-06-04 07:27:01,609 | INFO     | update_server=False
[2025-06-04 09:27:15] 2025-06-04 07:27:01,609 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:27:15] 2025-06-04 07:27:01,610 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:27:15] 2025-06-04 07:27:01,706 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:27:15] 2025-06-04 07:27:01,707 | INFO     | aborting loop
[2025-06-04 09:27:15] 2025-06-04 07:27:02,111 | INFO     | all data control threads have been joined
[2025-06-04 09:27:15] 2025-06-04 07:27:02,173 | INFO     | all job control threads have been joined
[2025-06-04 09:27:15] 2025-06-04 07:27:02,270 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:27:15] 2025-06-04 07:27:02,270 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:27:15] 2025-06-04 07:27:02,270 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:27:15] 2025-06-04 07:27:02,286 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:27:15] 2025-06-04 07:27:02,608 | INFO     | all payload control threads have been joined
[2025-06-04 09:27:15] 2025-06-04 07:27:02,615 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:27:15] 2025-06-04 07:27:02,619 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:27:15] 2025-06-04 07:27:02,712 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:27:15] 2025-06-04 07:27:02,917 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:27:15] 2025-06-04 07:27:02,995 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:27:15] 2025-06-04 07:27:03,117 | INFO     | [data] control thread has finished
[2025-06-04 09:27:15] 2025-06-04 07:27:03,179 | INFO     | [job] control thread has finished
[2025-06-04 09:27:15] 2025-06-04 07:27:03,567 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:27:15] 2025-06-04 07:27:03,613 | INFO     | [job] validate thread has finished
[2025-06-04 09:27:15] 2025-06-04 07:27:03,616 | INFO     | [payload] control thread has finished
[2025-06-04 09:27:15] 2025-06-04 07:27:03,673 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:27:15] 2025-06-04 07:27:03,697 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:27:15] 2025-06-04 07:27:03,916 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:27:15] 2025-06-04 07:27:04,091 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:27:15] 2025-06-04 07:27:04,293 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:27:15] 2025-06-04 07:27:05,000 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:27:15] 2025-06-04 07:27:09,009 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:27:15] 2025-06-04 07:27:09,864 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140113672496960)>', '<ExcThread(monitor, started 140113090696960)>']
[2025-06-04 09:27:15] 2025-06-04 07:27:10,309 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:27:15] 2025-06-04 07:27:10,310 | INFO     | [monitor] control thread has ended
[2025-06-04 09:27:15] 2025-06-04 07:27:14,889 | INFO     | all workflow threads have been joined
[2025-06-04 09:27:15] 2025-06-04 07:27:14,890 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:27:15] 2025-06-04 07:27:14,890 | INFO     | traces error code: 0
[2025-06-04 09:27:15] 2025-06-04 07:27:14,890 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:27:15] 2025-06-04 07:27:15,125 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:27:15] 2025-06-04 07:27:15,147 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:27:15] 2025-06-04 07:27:15,152 [wrapper] pilotpid: 426
[2025-06-04 09:27:15] 2025-06-04 07:27:15,155 [wrapper] Pilot exit status: 0
[2025-06-04 09:27:15] 2025-06-04 07:27:15,184 [wrapper] pandaids: 6677677254
[2025-06-04 09:27:15] 2025-06-04 07:27:15,224 [wrapper] cleanup supervisor_pilot 32127 427
[2025-06-04 09:27:15] 2025-06-04 07:27:15,228 [wrapper] Test setup, not cleaning
[2025-06-04 09:27:15] 2025-06-04 07:27:15,231 [wrapper] apfmon messages muted
[2025-06-04 09:27:15] 2025-06-04 07:27:15,246 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:27:15] 2025-06-04 07:27:15,251 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:27:15]  *** Error codes and diagnostics ***
[2025-06-04 09:27:15]     "exeErrorCode": 0,
[2025-06-04 09:27:15]     "exeErrorDiag": "",
[2025-06-04 09:27:15]     "pilotErrorCode": 0,
[2025-06-04 09:27:15]     "pilotErrorDiag": "",
[2025-06-04 09:27:15]  *** Listing of results directory ***
[2025-06-04 09:27:15] total 380516
[2025-06-04 09:27:15] -rw-r--r--. 1 boinc boinc    495897 Jun  3 17:35 pilot3.tar.gz
[2025-06-04 09:27:15] -rw-r--r--. 1 boinc boinc      5111 Jun  3 17:37 queuedata.json
[2025-06-04 09:27:15] -rwx------. 1 boinc boinc     37140 Jun  3 17:37 runpilot2-wrapper.sh
[2025-06-04 09:27:15] -rw-r--r--. 1 boinc boinc       100 Jun  4 05:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:27:15] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 05:53 run_atlas
[2025-06-04 09:27:15] -rw-r--r--. 1 boinc boinc       105 Jun  4 05:53 job.xml
[2025-06-04 09:27:15] -rw-r--r--. 2 boinc boinc 214355478 Jun  4 05:53 EVNT.45006593._001492.pool.root.1
[2025-06-04 09:27:15] -rw-r--r--. 1 boinc boinc      6391 Jun  4 05:53 init_data.xml
[2025-06-04 09:27:15] -rw-r--r--. 2 boinc boinc     15093 Jun  4 05:53 start_atlas.sh
[2025-06-04 09:27:15] drwxrwx--x. 2 boinc boinc        68 Jun  4 05:53 shared
[2025-06-04 09:27:15] -rw-r--r--. 2 boinc boinc    508882 Jun  4 05:53 input.tar.gz
[2025-06-04 09:27:15] -rw-r--r--. 1 boinc boinc         0 Jun  4 05:53 boinc_lockfile
[2025-06-04 09:27:15] -rw-r--r--. 1 boinc boinc      2525 Jun  4 05:53 pandaJob.out
[2025-06-04 09:27:15] -rw-------. 1 boinc boinc    986077 Jun  4 05:53 agis_schedconf.cvmfs.json
[2025-06-04 09:27:15] drwx------. 4 boinc boinc      4096 Jun  4 05:53 pilot3
[2025-06-04 09:27:15] -rw-------. 1 boinc boinc 168525417 Jun  4 09:26 HITS.45006595._037136.pool.root.1
[2025-06-04 09:27:15] -rw-r--r--. 1 boinc boinc       531 Jun  4 09:26 boinc_task_state.xml
[2025-06-04 09:27:15] -rw-------. 1 boinc boinc      1020 Jun  4 09:26 memory_monitor_summary.json
[2025-06-04 09:27:15] -rw-------. 1 boinc boinc   1603667 Jun  4 09:26 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:27:15] -rw-------. 1 boinc boinc    371614 Jun  4 09:26 log.45006595._037136.job.log.tgz.1
[2025-06-04 09:27:15] -rw-------. 1 boinc boinc        95 Jun  4 09:26 pilot_heartbeat.json
[2025-06-04 09:27:15] -rw-------. 1 boinc boinc      7689 Jun  4 09:26 heartbeat.json
[2025-06-04 09:27:15] -rw-r--r--. 1 boinc boinc      8192 Jun  4 09:27 boinc_mmap_file
[2025-06-04 09:27:15] -rw-r--r--. 1 boinc boinc        28 Jun  4 09:27 wrapper_checkpoint.txt
[2025-06-04 09:27:15] -rw-------. 1 boinc boinc      4416 Jun  4 09:27 pilotlog.txt
[2025-06-04 09:27:15] -rw-------. 1 boinc boinc   1105567 Jun  4 09:27 log.45006595._037136.job.log.1
[2025-06-04 09:27:15] -rw-------. 1 boinc boinc       357 Jun  4 09:27 output.list
[2025-06-04 09:27:15] -rw-r--r--. 1 boinc boinc       620 Jun  4 09:27 runtime_log
[2025-06-04 09:27:15] -rw-------. 1 boinc boinc   1495040 Jun  4 09:27 result.tar.gz
[2025-06-04 09:27:15] -rw-r--r--. 1 boinc boinc      8659 Jun  4 09:27 runtime_log.err
[2025-06-04 09:27:15] -rw-------. 1 boinc boinc       657 Jun  4 09:27 4pWLDmItig7n9Rq4apOajLDm4fhM0noT9bVof3QYDmK5YKDmGWMzmm.diag
[2025-06-04 09:27:15] -rw-r--r--. 1 boinc boinc     20540 Jun  4 09:27 stderr.txt
[2025-06-04 09:27:15] HITS file was successfully produced:
[2025-06-04 09:27:15] -rw-------. 1 boinc boinc 168525417 Jun  4 09:26 shared/HITS.pool.root.1
[2025-06-04 09:27:15]  *** Contents of shared directory: ***
[2025-06-04 09:27:15] total 375884
[2025-06-04 09:27:15] -rw-r--r--. 2 boinc boinc 214355478 Jun  4 05:53 ATLAS.root_0
[2025-06-04 09:27:15] -rw-r--r--. 2 boinc boinc     15093 Jun  4 05:53 start_atlas.sh
[2025-06-04 09:27:15] -rw-r--r--. 2 boinc boinc    508882 Jun  4 05:53 input.tar.gz
[2025-06-04 09:27:15] -rw-------. 1 boinc boinc 168525417 Jun  4 09:26 HITS.pool.root.1
[2025-06-04 09:27:15] -rw-------. 1 boinc boinc   1495040 Jun  4 09:27 result.tar.gz
09:27:16 (29183): run_atlas exited; CPU time 48873.943378
09:27:16 (29183): called boinc_finish(0)

</stderr_txt>
]]>

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