Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:59:21 (1815055): wrapper (7.7.26015): starting
13:59:21 (1815055): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 13:59:21] Arguments: --nthreads 8
[2025-06-03 13:59:21] Threads: 8
[2025-06-03 13:59:21] Checking for CVMFS
[2025-06-03 13:59:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:59:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:59:21] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:59:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:59:21] 2.12.6.0 3581464 138413 237408 146750 2 187 25954054 32935936 3357 130560 0 357784692 99.603 381354390 28100 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 13:59:21] CVMFS is ok
[2025-06-03 13:59:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 13:59:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 13:59:21] Further information can be found at the LHC@home message board.
[2025-06-03 13:59:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:59:21] Checking for apptainer binary...
[2025-06-03 13:59:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:59:21] Running /usr/bin/apptainer --version
[2025-06-03 13:59:21] apptainer version 1.4.1-1.el9
[2025-06-03 13:59:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:59:21] c-6-6.aglt2.org
[2025-06-03 13:59:21] apptainer works
[2025-06-03 13:59:21] Set ATHENA_PROC_NUMBER=8
[2025-06-03 13:59:21] Set ATHENA_CORE_NUMBER=8
[2025-06-03 13:59:21] Starting ATLAS job with PandaID=6677676723
[2025-06-03 13:59:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 19:09:27]  *** The last 200 lines of the pilot log: ***
[2025-06-03 19:09:28] 2025-06-03 23:09:10,322 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6677676723/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 19:09:28] 2025-06-03 23:09:10,322 | INFO     | extracted standard info from prmon json
[2025-06-03 19:09:28] 2025-06-03 23:09:10,323 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 19:09:28] 2025-06-03 23:09:10,323 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 19:09:28] 2025-06-03 23:09:10,323 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 19:09:28] 2025-06-03 23:09:10,323 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 19:09:28] 2025-06-03 23:09:10,364 | INFO     | fitting pss+swap vs Time
[2025-06-03 19:09:28] 2025-06-03 23:09:10,364 | INFO     | sum of square deviations: 8711452788.197332
[2025-06-03 19:09:28] 2025-06-03 23:09:10,391 | INFO     | sum of deviations: 107026966507.42107
[2025-06-03 19:09:28] 2025-06-03 23:09:10,391 | INFO     | mean x: 1748982837.1118422
[2025-06-03 19:09:28] 2025-06-03 23:09:10,391 | INFO     | mean y: 2060937.105263158
[2025-06-03 19:09:28] 2025-06-03 23:09:10,392 | INFO     | -- intersect: -21485552217.75618
[2025-06-03 19:09:28] 2025-06-03 23:09:10,392 | INFO     | intersect: -21485552217.75618
[2025-06-03 19:09:28] 2025-06-03 23:09:10,392 | INFO     | chi2: 4.443230662256978
[2025-06-03 19:09:28] 2025-06-03 23:09:10,393 | INFO     | sum of square deviations: 8288692286.294302
[2025-06-03 19:09:28] 2025-06-03 23:09:10,402 | INFO     | sum of deviations: 123296103593.68564
[2025-06-03 19:09:28] 2025-06-03 23:09:10,403 | INFO     | mean x: 1748982684.6220737
[2025-06-03 19:09:28] 2025-06-03 23:09:10,403 | INFO     | mean y: 2066735.9264214046
[2025-06-03 19:09:28] 2025-06-03 23:09:10,408 | INFO     | -- intersect: -26014431743.9725
[2025-06-03 19:09:28] 2025-06-03 23:09:10,408 | INFO     | intersect: -26014431743.9725
[2025-06-03 19:09:28] 2025-06-03 23:09:10,409 | INFO     | chi2: 3.774925337559889
[2025-06-03 19:09:28] 2025-06-03 23:09:10,409 | INFO     | current chi2=3.774925337559889 (change=15.040977511566267 %)
[2025-06-03 19:09:28] 2025-06-03 23:09:10,409 | INFO     | right removable region: 298
[2025-06-03 19:09:28] 2025-06-03 23:09:10,409 | INFO     | sum of square deviations: 8288578826.294302
[2025-06-03 19:09:28] 2025-06-03 23:09:10,412 | INFO     | sum of deviations: 42632939350.685555
[2025-06-03 19:09:28] 2025-06-03 23:09:10,439 | INFO     | mean x: 1748982989.6220737
[2025-06-03 19:09:28] 2025-06-03 23:09:10,439 | INFO     | mean y: 2084116.9264214046
[2025-06-03 19:09:28] 2025-06-03 23:09:10,440 | INFO     | -- intersect: -8993943704.561417
[2025-06-03 19:09:28] 2025-06-03 23:09:10,440 | INFO     | intersect: -8993943704.561417
[2025-06-03 19:09:28] 2025-06-03 23:09:10,440 | INFO     | chi2: 1.9490048242692564
[2025-06-03 19:09:28] 2025-06-03 23:09:10,440 | INFO     | current chi2=1.9490048242692564 (change=56.13541199143503 %)
[2025-06-03 19:09:28] 2025-06-03 23:09:10,441 | INFO     | sum of square deviations: 7879612101.826523
[2025-06-03 19:09:28] 2025-06-03 23:09:10,446 | INFO     | sum of deviations: -50201164.12244797
[2025-06-03 19:09:28] 2025-06-03 23:09:10,446 | INFO     | mean x: 1748983142.132653
[2025-06-03 19:09:28] 2025-06-03 23:09:10,446 | INFO     | mean y: 2100009.7210884355
[2025-06-03 19:09:28] 2025-06-03 23:09:10,447 | INFO     | -- intersect: 13242815.817500653
[2025-06-03 19:09:28] 2025-06-03 23:09:10,447 | INFO     | intersect: 13242815.817500653
[2025-06-03 19:09:28] 2025-06-03 23:09:10,447 | INFO     | chi2: 0.8924930301435767
[2025-06-03 19:09:28] 2025-06-03 23:09:10,447 | INFO     | current chi2=0.8924930301435767 (change=54.207756746923366 %)
[2025-06-03 19:09:28] 2025-06-03 23:09:10,448 | INFO     | sum of square deviations: 7484320052.290608
[2025-06-03 19:09:28] 2025-06-03 23:09:10,457 | INFO     | sum of deviations: -4000115004.5190296
[2025-06-03 19:09:28] 2025-06-03 23:09:10,458 | INFO     | mean x: 1748983294.6435986
[2025-06-03 19:09:28] 2025-06-03 23:09:10,458 | INFO     | mean y: 2101510.422145329
[2025-06-03 19:09:28] 2025-06-03 23:09:10,458 | INFO     | -- intersect: 936873710.2582265
[2025-06-03 19:09:28] 2025-06-03 23:09:10,458 | INFO     | intersect: 936873710.2582265
[2025-06-03 19:09:28] 2025-06-03 23:09:10,458 | INFO     | chi2: 0.858589799963619
[2025-06-03 19:09:28] 2025-06-03 23:09:10,459 | INFO     | current chi2=0.858589799963619 (change=3.7987109181685947 %)
[2025-06-03 19:09:28] 2025-06-03 23:09:10,459 | INFO     | left removable region: 30
[2025-06-03 19:09:28] 2025-06-03 23:09:10,459 | INFO     | sum of square deviations: 5968326205.294763
[2025-06-03 19:09:28] 2025-06-03 23:09:10,518 | INFO     | sum of deviations: 11136496994.899252
[2025-06-03 19:09:28] 2025-06-03 23:09:10,519 | INFO     | mean x: 1748983569.1902986
[2025-06-03 19:09:28] 2025-06-03 23:09:10,519 | INFO     | mean y: 2110503.8843283583
[2025-06-03 19:09:28] 2025-06-03 23:09:10,519 | INFO     | -- intersect: -3261375705.220084
[2025-06-03 19:09:28] 2025-06-03 23:09:10,519 | INFO     | intersect: -3261375705.220084
[2025-06-03 19:09:28] 2025-06-03 23:09:10,519 | INFO     | chi2: 0.1542205449077773
[2025-06-03 19:09:28] 2025-06-03 23:09:10,520 | INFO     | -- intersect: -3261375705.220084
[2025-06-03 19:09:28] 2025-06-03 23:09:10,520 | INFO     | current memory leak: 1.87 B/s (using 268 data points, chi2=0.15)
[2025-06-03 19:09:28] 2025-06-03 23:09:10,520 | INFO     | ..............................
[2025-06-03 19:09:28] 2025-06-03 23:09:10,521 | INFO     | . Timing measurements:
[2025-06-03 19:09:28] 2025-06-03 23:09:10,521 | INFO     | . get job = 0 s
[2025-06-03 19:09:28] 2025-06-03 23:09:10,521 | INFO     | . initial setup = 2 s
[2025-06-03 19:09:28] 2025-06-03 23:09:10,521 | INFO     | . payload setup = 5 s
[2025-06-03 19:09:28] 2025-06-03 23:09:10,541 | INFO     | . stage-in = 0 s
[2025-06-03 19:09:28] 2025-06-03 23:09:10,541 | INFO     | . payload execution = 18509 s
[2025-06-03 19:09:28] 2025-06-03 23:09:10,541 | INFO     | . stage-out = 4 s
[2025-06-03 19:09:28] 2025-06-03 23:09:10,541 | INFO     | . log creation = 0 s
[2025-06-03 19:09:28] 2025-06-03 23:09:10,541 | INFO     | ..............................
[2025-06-03 19:09:28] 2025-06-03 23:09:10,766 | INFO     | 
[2025-06-03 19:09:28] 2025-06-03 23:09:10,766 | INFO     | job summary report
[2025-06-03 19:09:28] 2025-06-03 23:09:10,766 | INFO     | --------------------------------------------------
[2025-06-03 19:09:28] 2025-06-03 23:09:10,766 | INFO     | PanDA job id: 6677676723
[2025-06-03 19:09:28] 2025-06-03 23:09:10,767 | INFO     | task id: 45006595
[2025-06-03 19:09:28] 2025-06-03 23:09:10,767 | INFO     | errors: (none)
[2025-06-03 19:09:28] 2025-06-03 23:09:10,767 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 19:09:28] 2025-06-03 23:09:10,767 | INFO     | pilot state: finished 
[2025-06-03 19:09:28] 2025-06-03 23:09:10,767 | INFO     | transexitcode: 0
[2025-06-03 19:09:28] 2025-06-03 23:09:10,767 | INFO     | exeerrorcode: 0
[2025-06-03 19:09:28] 2025-06-03 23:09:10,767 | INFO     | exeerrordiag: 
[2025-06-03 19:09:28] 2025-06-03 23:09:10,767 | INFO     | exitcode: 0
[2025-06-03 19:09:28] 2025-06-03 23:09:10,767 | INFO     | exitmsg: OK
[2025-06-03 19:09:28] 2025-06-03 23:09:10,767 | INFO     | cpuconsumptiontime: 42402 s
[2025-06-03 19:09:28] 2025-06-03 23:09:10,767 | INFO     | nevents: 400
[2025-06-03 19:09:28] 2025-06-03 23:09:10,768 | INFO     | neventsw: 0
[2025-06-03 19:09:28] 2025-06-03 23:09:10,768 | INFO     | pid: 1826407
[2025-06-03 19:09:28] 2025-06-03 23:09:10,768 | INFO     | pgrp: 1826407
[2025-06-03 19:09:28] 2025-06-03 23:09:10,768 | INFO     | corecount: 8
[2025-06-03 19:09:28] 2025-06-03 23:09:10,768 | INFO     | event service: False
[2025-06-03 19:09:28] 2025-06-03 23:09:10,768 | INFO     | sizes: {0: 2405184, 4: 2405390, 11: 2405418, 18519: 2437579, 18520: 2437578, 18525: 2446575, 18527: 2446759, 18565: 2446929}
[2025-06-03 19:09:28] 2025-06-03 23:09:10,768 | INFO     | --------------------------------------------------
[2025-06-03 19:09:28] 2025-06-03 23:09:10,768 | INFO     | 
[2025-06-03 19:09:28] 2025-06-03 23:09:10,768 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-03 19:09:28] 2025-06-03 23:09:10,791 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 19:09:28] 2025-06-03 23:09:10,791 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 19:09:28] 2025-06-03 23:09:10,791 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 19:09:28] 2025-06-03 23:09:10,791 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 19:09:28] 2025-06-03 23:09:10,791 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 19:09:28] 2025-06-03 23:09:10,792 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 19:09:28] 2025-06-03 23:09:10,792 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 19:09:28] 2025-06-03 23:09:10,792 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 19:09:28] 2025-06-03 23:09:10,792 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 19:09:28] 2025-06-03 23:09:10,792 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 19:09:28] 2025-06-03 23:09:10,792 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 19:09:28] 2025-06-03 23:09:10,792 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 19:09:28] 2025-06-03 23:09:10,792 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 19:09:28] 2025-06-03 23:09:10,792 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 19:09:28] 2025-06-03 23:09:10,792 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 19:09:28] 2025-06-03 23:09:10,792 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 19:09:28] 2025-06-03 23:09:10,793 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 19:09:28] 2025-06-03 23:09:10,793 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 19:09:28] 2025-06-03 23:09:10,793 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 19:09:28] 2025-06-03 23:09:10,793 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 19:09:28] 2025-06-03 23:09:10,793 | INFO     | job 6677676723 has completed (purged errors)
[2025-06-03 19:09:28] 2025-06-03 23:09:10,794 | INFO     | overall cleanup function is called
[2025-06-03 19:09:28] 2025-06-03 23:09:11,805 | INFO     | --- collectZombieJob: --- 10, [1826407]
[2025-06-03 19:09:28] 2025-06-03 23:09:11,805 | INFO     | zombie collector waiting for pid 1826407
[2025-06-03 19:09:28] 2025-06-03 23:09:11,805 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 19:09:28] 2025-06-03 23:09:11,806 | INFO     | collected zombie processes
[2025-06-03 19:09:28] 2025-06-03 23:09:11,806 | INFO     | will attempt to kill all subprocesses of pid=1826407
[2025-06-03 19:09:28] 2025-06-03 23:09:12,915 | INFO     | process IDs to be killed: [1826407] (in reverse order)
[2025-06-03 19:09:28] 2025-06-03 23:09:13,193 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 19:09:28] 2025-06-03 23:09:13,193 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 19:09:28] 2025-06-03 23:09:13,218 | INFO     | did not find any defunct processes belonging to 1826407
[2025-06-03 19:09:28] 2025-06-03 23:09:13,235 | INFO     | did not find any defunct processes belonging to 1826407
[2025-06-03 19:09:28] 2025-06-03 23:09:13,235 | INFO     | ready for new job
[2025-06-03 19:09:28] 2025-06-03 23:09:13,235 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 19:09:28] 2025-06-03 23:09:13,241 | INFO     | **************************************
[2025-06-03 19:09:28] 2025-06-03 23:09:13,241 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 19:09:28] 2025-06-03 23:09:13,242 | INFO     | **************************************
[2025-06-03 19:09:28] 2025-06-03 23:09:13,242 | INFO     | 
[2025-06-03 19:09:28] 2025-06-03 23:09:13,257 | INFO     | architecture information:
[2025-06-03 19:09:28] 2025-06-03 23:09:13,261 | INFO     | executing command: cat /etc/os-release
[2025-06-03 19:09:28] 2025-06-03 23:09:13,485 | INFO     | cat /etc/os-release:
[2025-06-03 19:09:28] NAME="CentOS Linux"
[2025-06-03 19:09:28] VERSION="7 (Core)"
[2025-06-03 19:09:28] ID="centos"
[2025-06-03 19:09:28] ID_LIKE="rhel fedora"
[2025-06-03 19:09:28] VERSION_ID="7"
[2025-06-03 19:09:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 19:09:28] ANSI_COLOR="0;31"
[2025-06-03 19:09:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 19:09:28] HOME_URL="https://www.centos.org/"
[2025-06-03 19:09:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 19:09:28] 
[2025-06-03 19:09:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 19:09:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 19:09:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 19:09:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 19:09:28] 
[2025-06-03 19:09:28] 2025-06-03 23:09:13,486 | INFO     | **************************************
[2025-06-03 19:09:28] 2025-06-03 23:09:13,989 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-03 19:09:28] 2025-06-03 23:09:14,074 | INFO     | sufficient remaining disk space (74168926208 B)
[2025-06-03 19:09:28] 2025-06-03 23:09:14,075 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 19:09:28] 2025-06-03 23:09:14,075 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 19:09:28] 2025-06-03 23:09:14,075 | INFO     | update_server=False
[2025-06-03 19:09:28] 2025-06-03 23:09:14,075 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 19:09:28] 2025-06-03 23:09:14,075 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:09:28] 2025-06-03 23:09:14,076 | INFO     | aborting loop
[2025-06-03 19:09:28] 2025-06-03 23:09:14,076 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 19:09:28] 2025-06-03 23:09:14,076 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 19:09:28] 2025-06-03 23:09:14,076 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 19:09:28] 2025-06-03 23:09:14,076 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 19:09:28] 2025-06-03 23:09:14,203 | INFO     | all payload control threads have been joined
[2025-06-03 19:09:28] 2025-06-03 23:09:14,666 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 19:09:28] 2025-06-03 23:09:14,972 | INFO     | all job control threads have been joined
[2025-06-03 19:09:28] 2025-06-03 23:09:15,082 | INFO     | [job] retrieve thread has finished
[2025-06-03 19:09:28] 2025-06-03 23:09:15,083 | INFO     | [job] job monitor thread has finished
[2025-06-03 19:09:28] 2025-06-03 23:09:15,167 | INFO     | all data control threads have been joined
[2025-06-03 19:09:28] 2025-06-03 23:09:15,209 | INFO     | [payload] control thread has finished
[2025-06-03 19:09:28] 2025-06-03 23:09:15,533 | INFO     | [payload] failed_post thread has finished
[2025-06-03 19:09:28] 2025-06-03 23:09:15,538 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 19:09:28] 2025-06-03 23:09:15,621 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 19:09:28] 2025-06-03 23:09:15,634 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 19:09:28] 2025-06-03 23:09:15,639 | INFO     | [payload] validate_post thread has finished
[2025-06-03 19:09:28] 2025-06-03 23:09:15,810 | INFO     | [job] validate thread has finished
[2025-06-03 19:09:28] 2025-06-03 23:09:15,831 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:09:28] 2025-06-03 23:09:15,968 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 19:09:28] 2025-06-03 23:09:15,982 | INFO     | [job] control thread has finished
[2025-06-03 19:09:28] 2025-06-03 23:09:16,173 | INFO     | [data] control thread has finished
[2025-06-03 19:09:28] 2025-06-03 23:09:16,561 | INFO     | [data] copytool_in thread has finished
[2025-06-03 19:09:28] 2025-06-03 23:09:16,575 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 19:09:28] 2025-06-03 23:09:16,699 | INFO     | [data] copytool_out thread has finished
[2025-06-03 19:09:28] 2025-06-03 23:09:16,837 | INFO     | [job] queue monitor thread has finished
[2025-06-03 19:09:28] 2025-06-03 23:09:19,645 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 19:09:28] 2025-06-03 23:09:21,351 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140041210455872)>', '<ExcThread(monitor, started 140040336295680)>']
[2025-06-03 19:09:28] 2025-06-03 23:09:22,158 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 19:09:28] 2025-06-03 23:09:22,158 | INFO     | [monitor] control thread has ended
[2025-06-03 19:09:28] 2025-06-03 23:09:26,377 | INFO     | all workflow threads have been joined
[2025-06-03 19:09:28] 2025-06-03 23:09:26,377 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 19:09:28] 2025-06-03 23:09:26,378 | INFO     | traces error code: 0
[2025-06-03 19:09:28] 2025-06-03 23:09:26,378 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 19:09:28] 2025-06-03 23:09:26,791 [wrapper] ==== pilot stdout END ====
[2025-06-03 19:09:28] 2025-06-03 23:09:26,864 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 19:09:28] 2025-06-03 23:09:26,919 [wrapper] pilotpid: 1819799
[2025-06-03 19:09:28] 2025-06-03 23:09:26,976 [wrapper] Pilot exit status: 0
[2025-06-03 19:09:28] 2025-06-03 23:09:27,093 [wrapper] pandaids: 6677676723
[2025-06-03 19:09:28] 2025-06-03 23:09:27,199 [wrapper] cleanup supervisor_pilot 3572247 1819800
[2025-06-03 19:09:28] 2025-06-03 23:09:27,213 [wrapper] Test setup, not cleaning
[2025-06-03 19:09:28] 2025-06-03 23:09:27,217 [wrapper] apfmon messages muted
[2025-06-03 19:09:28] 2025-06-03 23:09:27,219 [wrapper] ==== wrapper stdout END ====
[2025-06-03 19:09:28] 2025-06-03 23:09:27,222 [wrapper] ==== wrapper stderr END ====
[2025-06-03 19:09:28]  *** Error codes and diagnostics ***
[2025-06-03 19:09:28]     "exeErrorCode": 0,
[2025-06-03 19:09:28]     "exeErrorDiag": "",
[2025-06-03 19:09:28]     "pilotErrorCode": 0,
[2025-06-03 19:09:28]     "pilotErrorDiag": "",
[2025-06-03 19:09:28]  *** Listing of results directory ***
[2025-06-03 19:09:28] total 389140
[2025-06-03 19:09:28] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 11:19 pilot3.tar.gz
[2025-06-03 19:09:28] -rwx------. 1 boincer umatlas     37140 Jun  3 11:25 runpilot2-wrapper.sh
[2025-06-03 19:09:28] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 11:25 queuedata.json
[2025-06-03 19:09:28] -rw-r--r--. 1 boincer umatlas       100 Jun  3 13:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 19:09:28] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 13:59 run_atlas
[2025-06-03 19:09:28] -rw-r--r--. 1 boincer umatlas       105 Jun  3 13:59 job.xml
[2025-06-03 19:09:28] -rw-r--r--. 2 boincer umatlas 213590278 Jun  3 13:59 EVNT.45006593._001479.pool.root.1
[2025-06-03 19:09:28] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:59 start_atlas.sh
[2025-06-03 19:09:28] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 13:59 shared
[2025-06-03 19:09:28] -rw-r--r--. 2 boincer umatlas    508875 Jun  3 13:59 input.tar.gz
[2025-06-03 19:09:28] -rw-r--r--. 1 boincer umatlas         0 Jun  3 13:59 boinc_lockfile
[2025-06-03 19:09:28] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 13:59 pandaJob.out
[2025-06-03 19:09:28] -rw-------. 1 boincer umatlas    985078 Jun  3 13:59 agis_schedconf.cvmfs.json
[2025-06-03 19:09:28] drwx------. 4 boincer umatlas      4096 Jun  3 13:59 pilot3
[2025-06-03 19:09:28] -rw-------. 1 boincer umatlas 177245524 Jun  3 19:07 HITS.45006595._036813.pool.root.1
[2025-06-03 19:09:28] -rw-r--r--. 1 boincer umatlas       531 Jun  3 19:07 boinc_task_state.xml
[2025-06-03 19:09:28] -rw-------. 1 boincer umatlas      1053 Jun  3 19:08 memory_monitor_summary.json
[2025-06-03 19:09:28] -rw-------. 1 boincer umatlas   1603667 Jun  3 19:08 agis_ddmendpoints.agis.ALL.json
[2025-06-03 19:09:28] -rw-------. 1 boincer umatlas    427397 Jun  3 19:08 log.45006595._036813.job.log.tgz.1
[2025-06-03 19:09:28] -rw-------. 1 boincer umatlas      7732 Jun  3 19:09 heartbeat.json
[2025-06-03 19:09:28] -rw-------. 1 boincer umatlas        95 Jun  3 19:09 pilot_heartbeat.json
[2025-06-03 19:09:28] -rw-r--r--. 1 boincer umatlas      6674 Jun  3 19:09 init_data.xml
[2025-06-03 19:09:28] -rw-r--r--. 1 boincer umatlas        28 Jun  3 19:09 wrapper_checkpoint.txt
[2025-06-03 19:09:28] -rw-------. 1 boincer umatlas      4476 Jun  3 19:09 pilotlog.txt
[2025-06-03 19:09:28] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 19:09 boinc_mmap_file
[2025-06-03 19:09:28] -rw-------. 1 boincer umatlas   1476910 Jun  3 19:09 log.45006595._036813.job.log.1
[2025-06-03 19:09:28] -rw-------. 1 boincer umatlas       357 Jun  3 19:09 output.list
[2025-06-03 19:09:28] -rw-r--r--. 1 boincer umatlas       620 Jun  3 19:09 runtime_log
[2025-06-03 19:09:28] -rw-------. 1 boincer umatlas   1925120 Jun  3 19:09 result.tar.gz
[2025-06-03 19:09:28] -rw-------. 1 boincer umatlas       657 Jun  3 19:09 unIODmQhig7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLnkKDmMIZsfn.diag
[2025-06-03 19:09:28] -rw-r--r--. 1 boincer umatlas      8645 Jun  3 19:09 runtime_log.err
[2025-06-03 19:09:28] -rw-r--r--. 1 boincer umatlas     20947 Jun  3 19:09 stderr.txt
[2025-06-03 19:09:28] HITS file was successfully produced:
[2025-06-03 19:09:28] -rw-------. 1 boincer umatlas 177245524 Jun  3 19:07 shared/HITS.pool.root.1
[2025-06-03 19:09:28]  *** Contents of shared directory: ***
[2025-06-03 19:09:28] total 384080
[2025-06-03 19:09:28] -rw-r--r--. 2 boincer umatlas 213590278 Jun  3 13:59 ATLAS.root_0
[2025-06-03 19:09:28] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:59 start_atlas.sh
[2025-06-03 19:09:28] -rw-r--r--. 2 boincer umatlas    508875 Jun  3 13:59 input.tar.gz
[2025-06-03 19:09:28] -rw-------. 1 boincer umatlas 177245524 Jun  3 19:07 HITS.pool.root.1
[2025-06-03 19:09:28] -rw-------. 1 boincer umatlas   1925120 Jun  3 19:09 result.tar.gz
19:09:29 (1815055): run_atlas exited; CPU time 43099.744313
19:09:29 (1815055): called boinc_finish(0)

</stderr_txt>
]]>

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