Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:00:49 (3623033): wrapper (7.7.26015): starting
14:00:49 (3623033): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 14:00:49] Arguments: --nthreads 8
[2025-06-03 14:00:49] Threads: 8
[2025-06-03 14:00:49] Checking for CVMFS
[2025-06-03 14:00:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 14:00:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 14:00:49] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 14:00:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 14:00:49] 2.12.6.0 3646663 90711 335340 146750 0 187 21131213 32935937 2847 16776704 1 376877049 99.633 367939007 25217 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 14:00:49] CVMFS is ok
[2025-06-03 14:00:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 14:00:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 14:00:49] Further information can be found at the LHC@home message board.
[2025-06-03 14:00:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 14:00:49] Checking for apptainer binary...
[2025-06-03 14:00:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 14:00:49] Running /usr/bin/apptainer --version
[2025-06-03 14:00:49] apptainer version 1.4.1-1.el9
[2025-06-03 14:00:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 14:00:50] c-5-2.aglt2.org
[2025-06-03 14:00:50] apptainer works
[2025-06-03 14:00:50] Set ATHENA_PROC_NUMBER=8
[2025-06-03 14:00:50] Set ATHENA_CORE_NUMBER=8
[2025-06-03 14:00:50] Starting ATLAS job with PandaID=6677676724
[2025-06-03 14:00:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 16:08:29]  *** The last 200 lines of the pilot log: ***
[2025-06-03 16:08:29] 2025-06-03 20:08:13,197 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6677676724/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 16:08:29] 2025-06-03 20:08:13,198 | INFO     | extracted standard info from prmon json
[2025-06-03 16:08:29] 2025-06-03 20:08:13,198 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 16:08:29] 2025-06-03 20:08:13,198 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 16:08:29] 2025-06-03 20:08:13,202 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 16:08:29] 2025-06-03 20:08:13,202 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 16:08:29] 2025-06-03 20:08:13,205 | INFO     | fitting pss+swap vs Time
[2025-06-03 16:08:29] 2025-06-03 20:08:13,210 | INFO     | sum of square deviations: 605640135.1679982
[2025-06-03 16:08:29] 2025-06-03 20:08:13,211 | INFO     | sum of deviations: 38651122334.4
[2025-06-03 16:08:29] 2025-06-03 20:08:13,211 | INFO     | mean x: 1748977466.216
[2025-06-03 16:08:29] 2025-06-03 20:08:13,211 | INFO     | mean y: 2042763.8
[2025-06-03 16:08:29] 2025-06-03 20:08:13,211 | INFO     | -- intersect: -111615299089.00183
[2025-06-03 16:08:29] 2025-06-03 20:08:13,211 | INFO     | intersect: -111615299089.00183
[2025-06-03 16:08:29] 2025-06-03 20:08:13,212 | INFO     | chi2: 3.6792989584373084
[2025-06-03 16:08:29] 2025-06-03 20:08:13,212 | INFO     | sum of square deviations: 535842409.92500097
[2025-06-03 16:08:29] 2025-06-03 20:08:13,213 | INFO     | sum of deviations: 37641090360.44998
[2025-06-03 16:08:29] 2025-06-03 20:08:13,213 | INFO     | mean x: 1748977313.725
[2025-06-03 16:08:29] 2025-06-03 20:08:13,213 | INFO     | mean y: 2040516.3166666667
[2025-06-03 16:08:29] 2025-06-03 20:08:13,213 | INFO     | -- intersect: -122857613525.46431
[2025-06-03 16:08:29] 2025-06-03 20:08:13,213 | INFO     | intersect: -122857613525.46431
[2025-06-03 16:08:29] 2025-06-03 20:08:13,217 | INFO     | chi2: 3.662562711936637
[2025-06-03 16:08:29] 2025-06-03 20:08:13,217 | INFO     | current chi2=3.662562711936637 (change=0.4548759611472181 %)
[2025-06-03 16:08:29] 2025-06-03 20:08:13,217 | INFO     | right removable region: 119
[2025-06-03 16:08:29] 2025-06-03 20:08:13,218 | INFO     | sum of square deviations: 535825939.92500097
[2025-06-03 16:08:29] 2025-06-03 20:08:13,218 | INFO     | sum of deviations: 13474031637.725
[2025-06-03 16:08:29] 2025-06-03 20:08:13,218 | INFO     | mean x: 1748977618.725
[2025-06-03 16:08:29] 2025-06-03 20:08:13,219 | INFO     | mean y: 2097512.9916666667
[2025-06-03 16:08:29] 2025-06-03 20:08:13,219 | INFO     | -- intersect: -43978191630.29255
[2025-06-03 16:08:29] 2025-06-03 20:08:13,219 | INFO     | intersect: -43978191630.29255
[2025-06-03 16:08:29] 2025-06-03 20:08:13,219 | INFO     | chi2: 1.2417786375255804
[2025-06-03 16:08:29] 2025-06-03 20:08:13,219 | INFO     | current chi2=1.2417786375255804 (change=66.24958581639706 %)
[2025-06-03 16:08:29] 2025-06-03 20:08:13,220 | INFO     | sum of square deviations: 471593244.66086936
[2025-06-03 16:08:29] 2025-06-03 20:08:13,220 | INFO     | sum of deviations: -3887367424.4347825
[2025-06-03 16:08:29] 2025-06-03 20:08:13,220 | INFO     | mean x: 1748977771.2347827
[2025-06-03 16:08:29] 2025-06-03 20:08:13,220 | INFO     | mean y: 2138599.6086956523
[2025-06-03 16:08:29] 2025-06-03 20:08:13,221 | INFO     | -- intersect: 14419052520.519205
[2025-06-03 16:08:29] 2025-06-03 20:08:13,221 | INFO     | intersect: 14419052520.519205
[2025-06-03 16:08:29] 2025-06-03 20:08:13,221 | INFO     | chi2: 0.12273666537880358
[2025-06-03 16:08:29] 2025-06-03 20:08:13,221 | INFO     | current chi2=0.12273666537880358 (change=90.11605920171297 %)
[2025-06-03 16:08:29] 2025-06-03 20:08:13,221 | INFO     | sum of square deviations: 412709486.8727271
[2025-06-03 16:08:29] 2025-06-03 20:08:13,222 | INFO     | sum of deviations: -3999767693.5999994
[2025-06-03 16:08:29] 2025-06-03 20:08:13,222 | INFO     | mean x: 1748977923.7454545
[2025-06-03 16:08:29] 2025-06-03 20:08:13,222 | INFO     | mean y: 2138751.8
[2025-06-03 16:08:29] 2025-06-03 20:08:13,222 | INFO     | -- intersect: 16952331608.340689
[2025-06-03 16:08:29] 2025-06-03 20:08:13,222 | INFO     | intersect: 16952331608.340689
[2025-06-03 16:08:29] 2025-06-03 20:08:13,223 | INFO     | chi2: 0.09552753717723989
[2025-06-03 16:08:29] 2025-06-03 20:08:13,223 | INFO     | current chi2=0.09552753717723989 (change=22.168704125688805 %)
[2025-06-03 16:08:29] 2025-06-03 20:08:13,223 | INFO     | left removable region: 30
[2025-06-03 16:08:29] 2025-06-03 20:08:13,223 | INFO     | sum of square deviations: 218579394.8089889
[2025-06-03 16:08:29] 2025-06-03 20:08:13,224 | INFO     | sum of deviations: -2838943433.820225
[2025-06-03 16:08:29] 2025-06-03 20:08:13,224 | INFO     | mean x: 1748978198.3033707
[2025-06-03 16:08:29] 2025-06-03 20:08:13,224 | INFO     | mean y: 2139310.0674157306
[2025-06-03 16:08:29] 2025-06-03 20:08:13,224 | INFO     | -- intersect: 22718142235.71871
[2025-06-03 16:08:29] 2025-06-03 20:08:13,224 | INFO     | intersect: 22718142235.71871
[2025-06-03 16:08:29] 2025-06-03 20:08:13,224 | INFO     | chi2: 0.08138854620326012
[2025-06-03 16:08:29] 2025-06-03 20:08:13,225 | INFO     | -- intersect: 22718142235.71871
[2025-06-03 16:08:29] 2025-06-03 20:08:13,225 | INFO     | current memory leak: -12.99 B/s (using 89 data points, chi2=0.08)
[2025-06-03 16:08:29] 2025-06-03 20:08:13,225 | INFO     | ..............................
[2025-06-03 16:08:29] 2025-06-03 20:08:13,225 | INFO     | . Timing measurements:
[2025-06-03 16:08:29] 2025-06-03 20:08:13,226 | INFO     | . get job = 0 s
[2025-06-03 16:08:29] 2025-06-03 20:08:13,226 | INFO     | . initial setup = 2 s
[2025-06-03 16:08:29] 2025-06-03 20:08:13,226 | INFO     | . payload setup = 5 s
[2025-06-03 16:08:29] 2025-06-03 20:08:13,226 | INFO     | . stage-in = 0 s
[2025-06-03 16:08:29] 2025-06-03 20:08:13,226 | INFO     | . payload execution = 7600 s
[2025-06-03 16:08:29] 2025-06-03 20:08:13,226 | INFO     | . stage-out = 1 s
[2025-06-03 16:08:29] 2025-06-03 20:08:13,226 | INFO     | . log creation = 0 s
[2025-06-03 16:08:29] 2025-06-03 20:08:13,226 | INFO     | ..............................
[2025-06-03 16:08:29] 2025-06-03 20:08:13,680 | INFO     | 
[2025-06-03 16:08:29] 2025-06-03 20:08:13,680 | INFO     | job summary report
[2025-06-03 16:08:29] 2025-06-03 20:08:13,680 | INFO     | --------------------------------------------------
[2025-06-03 16:08:29] 2025-06-03 20:08:13,681 | INFO     | PanDA job id: 6677676724
[2025-06-03 16:08:29] 2025-06-03 20:08:13,681 | INFO     | task id: 45006595
[2025-06-03 16:08:29] 2025-06-03 20:08:13,681 | INFO     | errors: (none)
[2025-06-03 16:08:29] 2025-06-03 20:08:13,681 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 16:08:29] 2025-06-03 20:08:13,681 | INFO     | pilot state: finished 
[2025-06-03 16:08:29] 2025-06-03 20:08:13,681 | INFO     | transexitcode: 0
[2025-06-03 16:08:29] 2025-06-03 20:08:13,681 | INFO     | exeerrorcode: 0
[2025-06-03 16:08:29] 2025-06-03 20:08:13,681 | INFO     | exeerrordiag: 
[2025-06-03 16:08:29] 2025-06-03 20:08:13,681 | INFO     | exitcode: 0
[2025-06-03 16:08:29] 2025-06-03 20:08:13,682 | INFO     | exitmsg: OK
[2025-06-03 16:08:29] 2025-06-03 20:08:13,682 | INFO     | cpuconsumptiontime: 41172 s
[2025-06-03 16:08:29] 2025-06-03 20:08:13,682 | INFO     | nevents: 400
[2025-06-03 16:08:29] 2025-06-03 20:08:13,682 | INFO     | neventsw: 0
[2025-06-03 16:08:29] 2025-06-03 20:08:13,682 | INFO     | pid: 3633735
[2025-06-03 16:08:29] 2025-06-03 20:08:13,682 | INFO     | pgrp: 3633735
[2025-06-03 16:08:29] 2025-06-03 20:08:13,682 | INFO     | corecount: 8
[2025-06-03 16:08:29] 2025-06-03 20:08:13,682 | INFO     | event service: False
[2025-06-03 16:08:29] 2025-06-03 20:08:13,682 | INFO     | sizes: {0: 2405184, 4: 2405390, 11: 2405418, 7610: 2432918, 7612: 2441859, 7613: 2441915, 7619: 2442213}
[2025-06-03 16:08:29] 2025-06-03 20:08:13,682 | INFO     | --------------------------------------------------
[2025-06-03 16:08:29] 2025-06-03 20:08:13,683 | INFO     | 
[2025-06-03 16:08:29] 2025-06-03 20:08:13,683 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-06-03 16:08:29] 2025-06-03 20:08:13,723 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 16:08:29] 2025-06-03 20:08:13,725 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 16:08:29] 2025-06-03 20:08:13,725 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 16:08:29] 2025-06-03 20:08:13,725 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 16:08:29] 2025-06-03 20:08:13,725 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 16:08:29] 2025-06-03 20:08:13,725 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 16:08:29] 2025-06-03 20:08:13,725 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 16:08:29] 2025-06-03 20:08:13,727 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 16:08:29] 2025-06-03 20:08:13,727 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 16:08:29] 2025-06-03 20:08:13,727 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 16:08:29] 2025-06-03 20:08:13,727 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 16:08:29] 2025-06-03 20:08:13,727 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 16:08:29] 2025-06-03 20:08:13,727 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 16:08:29] 2025-06-03 20:08:13,728 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 16:08:29] 2025-06-03 20:08:13,728 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 16:08:29] 2025-06-03 20:08:13,729 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 16:08:29] 2025-06-03 20:08:13,730 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 16:08:29] 2025-06-03 20:08:13,730 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 16:08:29] 2025-06-03 20:08:13,730 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 16:08:29] 2025-06-03 20:08:13,730 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 16:08:29] 2025-06-03 20:08:13,730 | INFO     | job 6677676724 has completed (purged errors)
[2025-06-03 16:08:29] 2025-06-03 20:08:13,732 | INFO     | overall cleanup function is called
[2025-06-03 16:08:29] 2025-06-03 20:08:14,744 | INFO     | --- collectZombieJob: --- 10, [3633735]
[2025-06-03 16:08:29] 2025-06-03 20:08:14,744 | INFO     | zombie collector waiting for pid 3633735
[2025-06-03 16:08:29] 2025-06-03 20:08:14,744 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 16:08:29] 2025-06-03 20:08:14,744 | INFO     | collected zombie processes
[2025-06-03 16:08:29] 2025-06-03 20:08:14,744 | INFO     | will attempt to kill all subprocesses of pid=3633735
[2025-06-03 16:08:29] 2025-06-03 20:08:15,153 | INFO     | process IDs to be killed: [3633735] (in reverse order)
[2025-06-03 16:08:29] 2025-06-03 20:08:15,266 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 16:08:29] 2025-06-03 20:08:15,266 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 16:08:29] 2025-06-03 20:08:15,280 | INFO     | did not find any defunct processes belonging to 3633735
[2025-06-03 16:08:29] 2025-06-03 20:08:15,295 | INFO     | did not find any defunct processes belonging to 3633735
[2025-06-03 16:08:29] 2025-06-03 20:08:15,295 | INFO     | ready for new job
[2025-06-03 16:08:29] 2025-06-03 20:08:15,296 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 16:08:29] 2025-06-03 20:08:15,300 | INFO     | **************************************
[2025-06-03 16:08:29] 2025-06-03 20:08:15,300 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 16:08:29] 2025-06-03 20:08:15,300 | INFO     | **************************************
[2025-06-03 16:08:29] 2025-06-03 20:08:15,300 | INFO     | 
[2025-06-03 16:08:29] 2025-06-03 20:08:15,317 | INFO     | architecture information:
[2025-06-03 16:08:29] 2025-06-03 20:08:15,321 | INFO     | executing command: cat /etc/os-release
[2025-06-03 16:08:29] 2025-06-03 20:08:15,349 | INFO     | cat /etc/os-release:
[2025-06-03 16:08:29] NAME="CentOS Linux"
[2025-06-03 16:08:29] VERSION="7 (Core)"
[2025-06-03 16:08:29] ID="centos"
[2025-06-03 16:08:29] ID_LIKE="rhel fedora"
[2025-06-03 16:08:29] VERSION_ID="7"
[2025-06-03 16:08:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 16:08:29] ANSI_COLOR="0;31"
[2025-06-03 16:08:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 16:08:29] HOME_URL="https://www.centos.org/"
[2025-06-03 16:08:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 16:08:29] 
[2025-06-03 16:08:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 16:08:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 16:08:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 16:08:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 16:08:29] 
[2025-06-03 16:08:29] 2025-06-03 20:08:15,350 | INFO     | **************************************
[2025-06-03 16:08:29] 2025-06-03 20:08:15,853 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-06-03 16:08:29] 2025-06-03 20:08:15,881 | INFO     | sufficient remaining disk space (74489790464 B)
[2025-06-03 16:08:29] 2025-06-03 20:08:15,882 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 16:08:29] 2025-06-03 20:08:15,882 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 16:08:29] 2025-06-03 20:08:15,882 | INFO     | update_server=False
[2025-06-03 16:08:29] 2025-06-03 20:08:15,883 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 16:08:29] 2025-06-03 20:08:15,884 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 16:08:29] 2025-06-03 20:08:15,884 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 16:08:29] 2025-06-03 20:08:15,885 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 16:08:29] 2025-06-03 20:08:15,885 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 16:08:29] 2025-06-03 20:08:15,889 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 16:08:29] 2025-06-03 20:08:15,889 | INFO     | aborting loop
[2025-06-03 16:08:29] 2025-06-03 20:08:15,980 | INFO     | all job control threads have been joined
[2025-06-03 16:08:29] 2025-06-03 20:08:16,889 | INFO     | [job] retrieve thread has finished
[2025-06-03 16:08:29] 2025-06-03 20:08:16,897 | INFO     | [job] job monitor thread has finished
[2025-06-03 16:08:29] 2025-06-03 20:08:16,901 | INFO     | all data control threads have been joined
[2025-06-03 16:08:29] 2025-06-03 20:08:16,929 | INFO     | all payload control threads have been joined
[2025-06-03 16:08:29] 2025-06-03 20:08:16,977 | INFO     | [payload] failed_post thread has finished
[2025-06-03 16:08:29] 2025-06-03 20:08:16,990 | INFO     | [job] control thread has finished
[2025-06-03 16:08:29] 2025-06-03 20:08:17,034 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 16:08:29] 2025-06-03 20:08:17,197 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 16:08:29] 2025-06-03 20:08:17,200 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 16:08:29] 2025-06-03 20:08:17,213 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 16:08:29] 2025-06-03 20:08:17,478 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 16:08:29] 2025-06-03 20:08:17,843 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 16:08:29] 2025-06-03 20:08:17,848 | INFO     | [data] copytool_in thread has finished
[2025-06-03 16:08:29] 2025-06-03 20:08:17,848 | INFO     | [job] validate thread has finished
[2025-06-03 16:08:29] 2025-06-03 20:08:17,907 | INFO     | [data] control thread has finished
[2025-06-03 16:08:29] 2025-06-03 20:08:17,936 | INFO     | [payload] control thread has finished
[2025-06-03 16:08:29] 2025-06-03 20:08:18,101 | INFO     | [payload] validate_post thread has finished
[2025-06-03 16:08:29] 2025-06-03 20:08:18,463 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 16:08:29] 2025-06-03 20:08:19,041 | INFO     | [data] copytool_out thread has finished
[2025-06-03 16:08:29] 2025-06-03 20:08:19,469 | INFO     | [job] queue monitor thread has finished
[2025-06-03 16:08:29] 2025-06-03 20:08:21,251 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 16:08:29] 2025-06-03 20:08:23,322 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139779639482176)>', '<ExcThread(monitor, started 139778771121920)>']
[2025-06-03 16:08:29] 2025-06-03 20:08:23,934 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 16:08:29] 2025-06-03 20:08:23,934 | INFO     | [monitor] control thread has ended
[2025-06-03 16:08:29] 2025-06-03 20:08:28,348 | INFO     | all workflow threads have been joined
[2025-06-03 16:08:29] 2025-06-03 20:08:28,348 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 16:08:29] 2025-06-03 20:08:28,349 | INFO     | traces error code: 0
[2025-06-03 16:08:29] 2025-06-03 20:08:28,349 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 16:08:29] 2025-06-03 20:08:28,816 [wrapper] ==== pilot stdout END ====
[2025-06-03 16:08:29] 2025-06-03 20:08:28,820 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 16:08:29] 2025-06-03 20:08:28,824 [wrapper] pilotpid: 3626703
[2025-06-03 16:08:29] 2025-06-03 20:08:28,826 [wrapper] Pilot exit status: 0
[2025-06-03 16:08:29] 2025-06-03 20:08:28,836 [wrapper] pandaids: 6677676724
[2025-06-03 16:08:29] 2025-06-03 20:08:28,904 [wrapper] cleanup supervisor_pilot  528867 3626704
[2025-06-03 16:08:29] 2025-06-03 20:08:28,907 [wrapper] Test setup, not cleaning
[2025-06-03 16:08:29] 2025-06-03 20:08:28,910 [wrapper] apfmon messages muted
[2025-06-03 16:08:29] 2025-06-03 20:08:28,913 [wrapper] ==== wrapper stdout END ====
[2025-06-03 16:08:29] 2025-06-03 20:08:28,915 [wrapper] ==== wrapper stderr END ====
[2025-06-03 16:08:29]  *** Error codes and diagnostics ***
[2025-06-03 16:08:29]     "exeErrorCode": 0,
[2025-06-03 16:08:29]     "exeErrorDiag": "",
[2025-06-03 16:08:29]     "pilotErrorCode": 0,
[2025-06-03 16:08:29]     "pilotErrorDiag": "",
[2025-06-03 16:08:29]  *** Listing of results directory ***
[2025-06-03 16:08:29] total 382600
[2025-06-03 16:08:29] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 11:19 pilot3.tar.gz
[2025-06-03 16:08:29] -rwx------. 1 boincer umatlas     37140 Jun  3 11:25 runpilot2-wrapper.sh
[2025-06-03 16:08:29] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 11:25 queuedata.json
[2025-06-03 16:08:29] -rw-r--r--. 1 boincer umatlas       100 Jun  3 14:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 16:08:29] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 14:00 run_atlas
[2025-06-03 16:08:29] -rw-r--r--. 1 boincer umatlas       105 Jun  3 14:00 job.xml
[2025-06-03 16:08:29] -rw-r--r--. 2 boincer umatlas 213590278 Jun  3 14:00 EVNT.45006593._001479.pool.root.1
[2025-06-03 16:08:29] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 14:00 start_atlas.sh
[2025-06-03 16:08:29] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 14:00 shared
[2025-06-03 16:08:29] -rw-r--r--. 2 boincer umatlas    508875 Jun  3 14:00 input.tar.gz
[2025-06-03 16:08:29] -rw-r--r--. 1 boincer umatlas         0 Jun  3 14:00 boinc_lockfile
[2025-06-03 16:08:29] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 14:00 pandaJob.out
[2025-06-03 16:08:29] -rw-------. 1 boincer umatlas    985078 Jun  3 14:00 agis_schedconf.cvmfs.json
[2025-06-03 16:08:29] -rw-------. 1 boincer umatlas   1603667 Jun  3 14:00 agis_ddmendpoints.agis.ALL.json
[2025-06-03 16:08:29] drwx------. 4 boincer umatlas      4096 Jun  3 14:00 pilot3
[2025-06-03 16:08:29] -rw-r--r--. 1 boincer umatlas      6672 Jun  3 16:04 init_data.xml
[2025-06-03 16:08:29] -rw-------. 1 boincer umatlas        95 Jun  3 16:07 pilot_heartbeat.json
[2025-06-03 16:08:29] -rw-------. 1 boincer umatlas 172326849 Jun  3 16:07 HITS.45006595._036814.pool.root.1
[2025-06-03 16:08:29] -rw-r--r--. 1 boincer umatlas       529 Jun  3 16:07 boinc_task_state.xml
[2025-06-03 16:08:29] -rw-------. 1 boincer umatlas      1036 Jun  3 16:08 memory_monitor_summary.json
[2025-06-03 16:08:29] -rw-------. 1 boincer umatlas    336256 Jun  3 16:08 log.45006595._036814.job.log.tgz.1
[2025-06-03 16:08:29] -rw-------. 1 boincer umatlas      7710 Jun  3 16:08 heartbeat.json
[2025-06-03 16:08:29] -rw-r--r--. 1 boincer umatlas        27 Jun  3 16:08 wrapper_checkpoint.txt
[2025-06-03 16:08:29] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 16:08 boinc_mmap_file
[2025-06-03 16:08:29] -rw-------. 1 boincer umatlas      4476 Jun  3 16:08 pilotlog.txt
[2025-06-03 16:08:29] -rw-------. 1 boincer umatlas    674795 Jun  3 16:08 log.45006595._036814.job.log.1
[2025-06-03 16:08:29] -rw-------. 1 boincer umatlas       357 Jun  3 16:08 output.list
[2025-06-03 16:08:29] -rw-r--r--. 1 boincer umatlas       620 Jun  3 16:08 runtime_log
[2025-06-03 16:08:29] -rw-------. 1 boincer umatlas   1034240 Jun  3 16:08 result.tar.gz
[2025-06-03 16:08:29] -rw-r--r--. 1 boincer umatlas      8644 Jun  3 16:08 runtime_log.err
[2025-06-03 16:08:29] -rw-------. 1 boincer umatlas       653 Jun  3 16:08 BGKODmQhig7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMnkKDm3Kbowm.diag
[2025-06-03 16:08:29] -rw-r--r--. 1 boincer umatlas     20908 Jun  3 16:08 stderr.txt
[2025-06-03 16:08:29] HITS file was successfully produced:
[2025-06-03 16:08:29] -rw-------. 1 boincer umatlas 172326849 Jun  3 16:07 shared/HITS.pool.root.1
[2025-06-03 16:08:29]  *** Contents of shared directory: ***
[2025-06-03 16:08:29] total 378412
[2025-06-03 16:08:29] -rw-r--r--. 2 boincer umatlas 213590278 Jun  3 14:00 ATLAS.root_0
[2025-06-03 16:08:29] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 14:00 start_atlas.sh
[2025-06-03 16:08:29] -rw-r--r--. 2 boincer umatlas    508875 Jun  3 14:00 input.tar.gz
[2025-06-03 16:08:29] -rw-------. 1 boincer umatlas 172326849 Jun  3 16:07 HITS.pool.root.1
[2025-06-03 16:08:29] -rw-------. 1 boincer umatlas   1034240 Jun  3 16:08 result.tar.gz
16:08:30 (3623033): run_atlas exited; CPU time 41462.142697
16:08:30 (3623033): called boinc_finish(0)

</stderr_txt>
]]>

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