Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:58:37 (582439): wrapper (7.7.26015): starting
13:58:37 (582439): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 13:58:37] Arguments: --nthreads 8
[2025-06-03 13:58:37] Threads: 8
[2025-06-03 13:58:37] Checking for CVMFS
[2025-06-03 13:58:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:58:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:58:37] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:58:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:58:37] 2.12.6.0 2656583 34960 284572 146750 3 197 20114113 32935937 4104 16776704 0 129735667 99.646 120319588 30175 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 13:58:37] CVMFS is ok
[2025-06-03 13:58:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 13:58:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 13:58:37] Further information can be found at the LHC@home message board.
[2025-06-03 13:58:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:58:37] Checking for apptainer binary...
[2025-06-03 13:58:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:58:37] Running /usr/bin/apptainer --version
[2025-06-03 13:58:37] apptainer version 1.4.1-1.el9
[2025-06-03 13:58:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:58:37] c-4-39.aglt2.org
[2025-06-03 13:58:37] apptainer works
[2025-06-03 13:58:37] Set ATHENA_PROC_NUMBER=8
[2025-06-03 13:58:37] Set ATHENA_CORE_NUMBER=8
[2025-06-03 13:58:37] Starting ATLAS job with PandaID=6677785876
[2025-06-03 13:58:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 16:38:45]  *** The last 200 lines of the pilot log: ***
[2025-06-03 16:38:45] 2025-06-03 20:38:30,020 | INFO     | mean x: 1748978156.5
[2025-06-03 16:38:45] 2025-06-03 20:38:30,020 | INFO     | mean y: 2046575.875
[2025-06-03 16:38:45] 2025-06-03 20:38:30,020 | INFO     | -- intersect: -92964914101.15974
[2025-06-03 16:38:45] 2025-06-03 20:38:30,020 | INFO     | intersect: -92964914101.15974
[2025-06-03 16:38:45] 2025-06-03 20:38:30,021 | INFO     | chi2: 3.551240284580972
[2025-06-03 16:38:45] 2025-06-03 20:38:30,021 | INFO     | current chi2=3.551240284580972 (change=-0.08785764221119625 %)
[2025-06-03 16:38:45] 2025-06-03 20:38:30,021 | INFO     | right removable region: 151
[2025-06-03 16:38:45] 2025-06-03 20:38:30,021 | INFO     | sum of square deviations: 1088905998.0
[2025-06-03 16:38:45] 2025-06-03 20:38:30,022 | INFO     | sum of deviations: 30488292819.0
[2025-06-03 16:38:45] 2025-06-03 20:38:30,022 | INFO     | mean x: 1748978461.5
[2025-06-03 16:38:45] 2025-06-03 20:38:30,022 | INFO     | mean y: 2096269.5394736843
[2025-06-03 16:38:45] 2025-06-03 20:38:30,022 | INFO     | -- intersect: -48967573808.75513
[2025-06-03 16:38:45] 2025-06-03 20:38:30,022 | INFO     | intersect: -48967573808.75513
[2025-06-03 16:38:45] 2025-06-03 20:38:30,023 | INFO     | chi2: 1.187043333135011
[2025-06-03 16:38:45] 2025-06-03 20:38:30,023 | INFO     | current chi2=1.187043333135011 (change=66.54447048885862 %)
[2025-06-03 16:38:45] 2025-06-03 20:38:30,023 | INFO     | sum of square deviations: 984941258.0
[2025-06-03 16:38:45] 2025-06-03 20:38:30,024 | INFO     | sum of deviations: 8170571068.0
[2025-06-03 16:38:45] 2025-06-03 20:38:30,024 | INFO     | mean x: 1748978614.0
[2025-06-03 16:38:45] 2025-06-03 20:38:30,024 | INFO     | mean y: 2128943.8843537415
[2025-06-03 16:38:45] 2025-06-03 20:38:30,024 | INFO     | -- intersect: -14506506922.498592
[2025-06-03 16:38:45] 2025-06-03 20:38:30,024 | INFO     | intersect: -14506506922.498592
[2025-06-03 16:38:45] 2025-06-03 20:38:30,025 | INFO     | chi2: 0.11930030947658421
[2025-06-03 16:38:45] 2025-06-03 20:38:30,025 | INFO     | current chi2=0.11930030947658421 (change=89.94979322603928 %)
[2025-06-03 16:38:45] 2025-06-03 20:38:30,025 | INFO     | sum of square deviations: 887813855.5
[2025-06-03 16:38:45] 2025-06-03 20:38:30,026 | INFO     | sum of deviations: 5724529414.5
[2025-06-03 16:38:45] 2025-06-03 20:38:30,026 | INFO     | mean x: 1748978766.5
[2025-06-03 16:38:45] 2025-06-03 20:38:30,026 | INFO     | mean y: 2132666.6126760566
[2025-06-03 16:38:45] 2025-06-03 20:38:30,026 | INFO     | -- intersect: -11275096599.56786
[2025-06-03 16:38:45] 2025-06-03 20:38:30,026 | INFO     | intersect: -11275096599.56786
[2025-06-03 16:38:45] 2025-06-03 20:38:30,027 | INFO     | chi2: 0.07522331963861348
[2025-06-03 16:38:45] 2025-06-03 20:38:30,027 | INFO     | current chi2=0.07522331963861348 (change=36.94624936963972 %)
[2025-06-03 16:38:45] 2025-06-03 20:38:30,027 | INFO     | sum of square deviations: 797291228.0
[2025-06-03 16:38:45] 2025-06-03 20:38:30,028 | INFO     | sum of deviations: 7417868583.000002
[2025-06-03 16:38:45] 2025-06-03 20:38:30,028 | INFO     | mean x: 1748978919.0
[2025-06-03 16:38:45] 2025-06-03 20:38:30,028 | INFO     | mean y: 2129862.094890511
[2025-06-03 16:38:45] 2025-06-03 20:38:30,028 | INFO     | -- intersect: -16270087014.194893
[2025-06-03 16:38:45] 2025-06-03 20:38:30,028 | INFO     | intersect: -16270087014.194893
[2025-06-03 16:38:45] 2025-06-03 20:38:30,029 | INFO     | chi2: 0.05074329293603311
[2025-06-03 16:38:45] 2025-06-03 20:38:30,029 | INFO     | current chi2=0.05074329293603311 (change=32.54313532051879 %)
[2025-06-03 16:38:45] 2025-06-03 20:38:30,029 | INFO     | sum of square deviations: 713140813.0
[2025-06-03 16:38:45] 2025-06-03 20:38:30,030 | INFO     | sum of deviations: 5906712136.5
[2025-06-03 16:38:45] 2025-06-03 20:38:30,030 | INFO     | mean x: 1748979071.5
[2025-06-03 16:38:45] 2025-06-03 20:38:30,030 | INFO     | mean y: 2132597.3257575757
[2025-06-03 16:38:45] 2025-06-03 20:38:30,030 | INFO     | -- intersect: -14484089085.39478
[2025-06-03 16:38:45] 2025-06-03 20:38:30,030 | INFO     | intersect: -14484089085.39478
[2025-06-03 16:38:45] 2025-06-03 20:38:30,031 | INFO     | chi2: 0.04814483488434835
[2025-06-03 16:38:45] 2025-06-03 20:38:30,031 | INFO     | current chi2=0.04814483488434835 (change=5.1207911456601165 %)
[2025-06-03 16:38:45] 2025-06-03 20:38:30,031 | INFO     | left removable region: 50
[2025-06-03 16:38:45] 2025-06-03 20:38:30,031 | INFO     | sum of square deviations: 319447850.0
[2025-06-03 16:38:45] 2025-06-03 20:38:30,032 | INFO     | sum of deviations: 500614800.00000036
[2025-06-03 16:38:45] 2025-06-03 20:38:30,032 | INFO     | mean x: 1748979651.0
[2025-06-03 16:38:45] 2025-06-03 20:38:30,032 | INFO     | mean y: 2135192.4653465347
[2025-06-03 16:38:45] 2025-06-03 20:38:30,032 | INFO     | -- intersect: -2738735025.2851734
[2025-06-03 16:38:45] 2025-06-03 20:38:30,032 | INFO     | intersect: -2738735025.2851734
[2025-06-03 16:38:45] 2025-06-03 20:38:30,032 | INFO     | chi2: 0.03402754614100184
[2025-06-03 16:38:45] 2025-06-03 20:38:30,032 | INFO     | -- intersect: -2738735025.2851734
[2025-06-03 16:38:45] 2025-06-03 20:38:30,033 | INFO     | current memory leak: 1.57 B/s (using 101 data points, chi2=0.03)
[2025-06-03 16:38:45] 2025-06-03 20:38:30,033 | INFO     | ..............................
[2025-06-03 16:38:45] 2025-06-03 20:38:30,034 | INFO     | . Timing measurements:
[2025-06-03 16:38:45] 2025-06-03 20:38:30,034 | INFO     | . get job = 0 s
[2025-06-03 16:38:45] 2025-06-03 20:38:30,034 | INFO     | . initial setup = 2 s
[2025-06-03 16:38:45] 2025-06-03 20:38:30,034 | INFO     | . payload setup = 6 s
[2025-06-03 16:38:45] 2025-06-03 20:38:30,034 | INFO     | . stage-in = 0 s
[2025-06-03 16:38:45] 2025-06-03 20:38:30,034 | INFO     | . payload execution = 9549 s
[2025-06-03 16:38:45] 2025-06-03 20:38:30,034 | INFO     | . stage-out = 0 s
[2025-06-03 16:38:45] 2025-06-03 20:38:30,034 | INFO     | . log creation = 0 s
[2025-06-03 16:38:45] 2025-06-03 20:38:30,034 | INFO     | ..............................
[2025-06-03 16:38:45] 2025-06-03 20:38:30,180 | INFO     | 
[2025-06-03 16:38:45] 2025-06-03 20:38:30,181 | INFO     | job summary report
[2025-06-03 16:38:45] 2025-06-03 20:38:30,181 | INFO     | --------------------------------------------------
[2025-06-03 16:38:45] 2025-06-03 20:38:30,181 | INFO     | PanDA job id: 6677785876
[2025-06-03 16:38:45] 2025-06-03 20:38:30,181 | INFO     | task id: 45006595
[2025-06-03 16:38:45] 2025-06-03 20:38:30,181 | INFO     | errors: (none)
[2025-06-03 16:38:45] 2025-06-03 20:38:30,181 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 16:38:45] 2025-06-03 20:38:30,182 | INFO     | pilot state: finished 
[2025-06-03 16:38:45] 2025-06-03 20:38:30,182 | INFO     | transexitcode: 0
[2025-06-03 16:38:45] 2025-06-03 20:38:30,182 | INFO     | exeerrorcode: 0
[2025-06-03 16:38:45] 2025-06-03 20:38:30,182 | INFO     | exeerrordiag: 
[2025-06-03 16:38:45] 2025-06-03 20:38:30,182 | INFO     | exitcode: 0
[2025-06-03 16:38:45] 2025-06-03 20:38:30,182 | INFO     | exitmsg: OK
[2025-06-03 16:38:45] 2025-06-03 20:38:30,182 | INFO     | cpuconsumptiontime: 42105 s
[2025-06-03 16:38:45] 2025-06-03 20:38:30,182 | INFO     | nevents: 400
[2025-06-03 16:38:45] 2025-06-03 20:38:30,183 | INFO     | neventsw: 0
[2025-06-03 16:38:45] 2025-06-03 20:38:30,183 | INFO     | pid: 593010
[2025-06-03 16:38:45] 2025-06-03 20:38:30,183 | INFO     | pgrp: 593010
[2025-06-03 16:38:45] 2025-06-03 20:38:30,183 | INFO     | corecount: 8
[2025-06-03 16:38:45] 2025-06-03 20:38:30,183 | INFO     | event service: False
[2025-06-03 16:38:45] 2025-06-03 20:38:30,183 | INFO     | sizes: {0: 2405070, 1: 2405212, 4: 2405418, 11: 2405446, 9558: 2433778, 9559: 2442719, 9563: 2442903, 9568: 2443073}
[2025-06-03 16:38:45] 2025-06-03 20:38:30,183 | INFO     | --------------------------------------------------
[2025-06-03 16:38:45] 2025-06-03 20:38:30,183 | INFO     | 
[2025-06-03 16:38:45] 2025-06-03 20:38:30,183 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-03 16:38:45] 2025-06-03 20:38:30,203 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 16:38:45] 2025-06-03 20:38:30,203 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 16:38:45] 2025-06-03 20:38:30,203 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 16:38:45] 2025-06-03 20:38:30,203 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 16:38:45] 2025-06-03 20:38:30,203 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 16:38:45] 2025-06-03 20:38:30,203 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 16:38:45] 2025-06-03 20:38:30,203 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 16:38:45] 2025-06-03 20:38:30,204 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 16:38:45] 2025-06-03 20:38:30,204 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 16:38:45] 2025-06-03 20:38:30,204 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 16:38:45] 2025-06-03 20:38:30,204 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 16:38:45] 2025-06-03 20:38:30,204 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 16:38:45] 2025-06-03 20:38:30,204 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 16:38:45] 2025-06-03 20:38:30,204 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 16:38:45] 2025-06-03 20:38:30,204 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 16:38:45] 2025-06-03 20:38:30,204 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 16:38:45] 2025-06-03 20:38:30,205 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 16:38:45] 2025-06-03 20:38:30,205 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 16:38:45] 2025-06-03 20:38:30,205 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 16:38:45] 2025-06-03 20:38:30,205 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 16:38:45] 2025-06-03 20:38:30,205 | INFO     | job 6677785876 has completed (purged errors)
[2025-06-03 16:38:45] 2025-06-03 20:38:30,205 | INFO     | overall cleanup function is called
[2025-06-03 16:38:45] 2025-06-03 20:38:31,213 | INFO     | --- collectZombieJob: --- 10, [593010]
[2025-06-03 16:38:45] 2025-06-03 20:38:31,213 | INFO     | zombie collector waiting for pid 593010
[2025-06-03 16:38:45] 2025-06-03 20:38:31,213 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 16:38:45] 2025-06-03 20:38:31,213 | INFO     | collected zombie processes
[2025-06-03 16:38:45] 2025-06-03 20:38:31,213 | INFO     | will attempt to kill all subprocesses of pid=593010
[2025-06-03 16:38:45] 2025-06-03 20:38:31,534 | INFO     | process IDs to be killed: [593010] (in reverse order)
[2025-06-03 16:38:45] 2025-06-03 20:38:31,632 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 16:38:45] 2025-06-03 20:38:31,632 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 16:38:45] 2025-06-03 20:38:31,644 | INFO     | did not find any defunct processes belonging to 593010
[2025-06-03 16:38:45] 2025-06-03 20:38:31,656 | INFO     | did not find any defunct processes belonging to 593010
[2025-06-03 16:38:45] 2025-06-03 20:38:31,656 | INFO     | ready for new job
[2025-06-03 16:38:45] 2025-06-03 20:38:31,656 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 16:38:45] 2025-06-03 20:38:31,658 | INFO     | **************************************
[2025-06-03 16:38:45] 2025-06-03 20:38:31,658 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 16:38:45] 2025-06-03 20:38:31,659 | INFO     | **************************************
[2025-06-03 16:38:45] 2025-06-03 20:38:31,659 | INFO     | 
[2025-06-03 16:38:45] 2025-06-03 20:38:31,672 | INFO     | architecture information:
[2025-06-03 16:38:45] 2025-06-03 20:38:31,673 | INFO     | executing command: cat /etc/os-release
[2025-06-03 16:38:45] 2025-06-03 20:38:31,687 | INFO     | cat /etc/os-release:
[2025-06-03 16:38:45] NAME="CentOS Linux"
[2025-06-03 16:38:45] VERSION="7 (Core)"
[2025-06-03 16:38:45] ID="centos"
[2025-06-03 16:38:45] ID_LIKE="rhel fedora"
[2025-06-03 16:38:45] VERSION_ID="7"
[2025-06-03 16:38:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 16:38:45] ANSI_COLOR="0;31"
[2025-06-03 16:38:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 16:38:45] HOME_URL="https://www.centos.org/"
[2025-06-03 16:38:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 16:38:45] 
[2025-06-03 16:38:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 16:38:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 16:38:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 16:38:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 16:38:45] 
[2025-06-03 16:38:45] 2025-06-03 20:38:31,687 | INFO     | **************************************
[2025-06-03 16:38:45] 2025-06-03 20:38:32,190 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-03 16:38:45] 2025-06-03 20:38:32,207 | INFO     | sufficient remaining disk space (76378275840 B)
[2025-06-03 16:38:45] 2025-06-03 20:38:32,207 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 16:38:45] 2025-06-03 20:38:32,208 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 16:38:45] 2025-06-03 20:38:32,208 | INFO     | update_server=False
[2025-06-03 16:38:45] 2025-06-03 20:38:32,208 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 16:38:45] 2025-06-03 20:38:32,208 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 16:38:45] 2025-06-03 20:38:32,208 | INFO     | aborting loop
[2025-06-03 16:38:45] 2025-06-03 20:38:32,208 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 16:38:45] 2025-06-03 20:38:32,208 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 16:38:45] 2025-06-03 20:38:32,209 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 16:38:45] 2025-06-03 20:38:32,209 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 16:38:45] 2025-06-03 20:38:32,209 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 16:38:45] 2025-06-03 20:38:32,296 | INFO     | all data control threads have been joined
[2025-06-03 16:38:45] 2025-06-03 20:38:32,505 | INFO     | all job control threads have been joined
[2025-06-03 16:38:45] 2025-06-03 20:38:33,213 | INFO     | [job] retrieve thread has finished
[2025-06-03 16:38:45] 2025-06-03 20:38:33,214 | INFO     | [job] job monitor thread has finished
[2025-06-03 16:38:45] 2025-06-03 20:38:33,219 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 16:38:45] 2025-06-03 20:38:33,301 | INFO     | [payload] failed_post thread has finished
[2025-06-03 16:38:45] 2025-06-03 20:38:33,301 | INFO     | [data] control thread has finished
[2025-06-03 16:38:45] 2025-06-03 20:38:33,330 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 16:38:45] 2025-06-03 20:38:33,511 | INFO     | [job] control thread has finished
[2025-06-03 16:38:45] 2025-06-03 20:38:33,627 | INFO     | all payload control threads have been joined
[2025-06-03 16:38:45] 2025-06-03 20:38:34,214 | INFO     | [data] copytool_out thread has finished
[2025-06-03 16:38:45] 2025-06-03 20:38:34,345 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 16:38:45] 2025-06-03 20:38:34,437 | INFO     | [payload] validate_post thread has finished
[2025-06-03 16:38:45] 2025-06-03 20:38:34,496 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 16:38:45] 2025-06-03 20:38:34,602 | INFO     | [job] validate thread has finished
[2025-06-03 16:38:45] 2025-06-03 20:38:34,634 | INFO     | [payload] control thread has finished
[2025-06-03 16:38:45] 2025-06-03 20:38:34,666 | INFO     | [data] copytool_in thread has finished
[2025-06-03 16:38:45] 2025-06-03 20:38:35,154 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 16:38:45] 2025-06-03 20:38:35,572 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 16:38:45] 2025-06-03 20:38:36,160 | INFO     | [job] queue monitor thread has finished
[2025-06-03 16:38:45] 2025-06-03 20:38:39,578 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 16:38:45] 2025-06-03 20:38:40,061 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140610263041856)>', '<ExcThread(monitor, started 140609755006720)>']
[2025-06-03 16:38:45] 2025-06-03 20:38:40,243 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 16:38:45] 2025-06-03 20:38:40,244 | INFO     | [monitor] control thread has ended
[2025-06-03 16:38:45] 2025-06-03 20:38:45,082 | INFO     | all workflow threads have been joined
[2025-06-03 16:38:45] 2025-06-03 20:38:45,082 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 16:38:45] 2025-06-03 20:38:45,082 | INFO     | traces error code: 0
[2025-06-03 16:38:45] 2025-06-03 20:38:45,083 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 16:38:45] 2025-06-03 20:38:45,244 [wrapper] ==== pilot stdout END ====
[2025-06-03 16:38:45] 2025-06-03 20:38:45,247 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 16:38:45] 2025-06-03 20:38:45,250 [wrapper] pilotpid: 586137
[2025-06-03 16:38:45] 2025-06-03 20:38:45,253 [wrapper] Pilot exit status: 0
[2025-06-03 16:38:45] 2025-06-03 20:38:45,263 [wrapper] pandaids: 6677785876
[2025-06-03 16:38:45] 2025-06-03 20:38:45,329 [wrapper] cleanup supervisor_pilot 1543783 586138
[2025-06-03 16:38:45] 2025-06-03 20:38:45,332 [wrapper] Test setup, not cleaning
[2025-06-03 16:38:45] 2025-06-03 20:38:45,335 [wrapper] apfmon messages muted
[2025-06-03 16:38:45] 2025-06-03 20:38:45,338 [wrapper] ==== wrapper stdout END ====
[2025-06-03 16:38:45] 2025-06-03 20:38:45,341 [wrapper] ==== wrapper stderr END ====
[2025-06-03 16:38:45]  *** Error codes and diagnostics ***
[2025-06-03 16:38:45]     "exeErrorCode": 0,
[2025-06-03 16:38:45]     "exeErrorDiag": "",
[2025-06-03 16:38:45]     "pilotErrorCode": 0,
[2025-06-03 16:38:45]     "pilotErrorDiag": "",
[2025-06-03 16:38:45]  *** Listing of results directory ***
[2025-06-03 16:38:45] total 389928
[2025-06-03 16:38:45] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 12:58 queuedata.json
[2025-06-03 16:38:45] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 12:58 pilot3.tar.gz
[2025-06-03 16:38:45] -rwx------. 1 boincer umatlas     37140 Jun  3 12:59 runpilot2-wrapper.sh
[2025-06-03 16:38:45] -rw-r--r--. 1 boincer umatlas       100 Jun  3 13:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 16:38:45] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 13:58 run_atlas
[2025-06-03 16:38:45] -rw-r--r--. 1 boincer umatlas       105 Jun  3 13:58 job.xml
[2025-06-03 16:38:45] -rw-r--r--. 2 boincer umatlas 215961956 Jun  3 13:58 EVNT.45006593._001593.pool.root.1
[2025-06-03 16:38:45] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:58 start_atlas.sh
[2025-06-03 16:38:45] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 13:58 shared
[2025-06-03 16:38:45] -rw-r--r--. 2 boincer umatlas    508876 Jun  3 13:58 input.tar.gz
[2025-06-03 16:38:45] -rw-r--r--. 1 boincer umatlas         0 Jun  3 13:58 boinc_lockfile
[2025-06-03 16:38:45] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 13:58 pandaJob.out
[2025-06-03 16:38:45] -rw-------. 1 boincer umatlas    985078 Jun  3 13:58 agis_schedconf.cvmfs.json
[2025-06-03 16:38:45] -rw-------. 1 boincer umatlas   1603667 Jun  3 13:58 agis_ddmendpoints.agis.ALL.json
[2025-06-03 16:38:45] drwx------. 4 boincer umatlas      4096 Jun  3 13:58 pilot3
[2025-06-03 16:38:45] -rw-r--r--. 1 boincer umatlas      6673 Jun  3 16:36 init_data.xml
[2025-06-03 16:38:45] -rw-------. 1 boincer umatlas 177026252 Jun  3 16:37 HITS.45006595._039716.pool.root.1
[2025-06-03 16:38:45] -rw-------. 1 boincer umatlas        95 Jun  3 16:37 pilot_heartbeat.json
[2025-06-03 16:38:45] -rw-r--r--. 1 boincer umatlas       529 Jun  3 16:37 boinc_task_state.xml
[2025-06-03 16:38:45] -rw-------. 1 boincer umatlas      1033 Jun  3 16:38 memory_monitor_summary.json
[2025-06-03 16:38:45] -rw-------. 1 boincer umatlas    347551 Jun  3 16:38 log.45006595._039716.job.log.tgz.1
[2025-06-03 16:38:45] -rw-------. 1 boincer umatlas      7705 Jun  3 16:38 heartbeat.json
[2025-06-03 16:38:45] -rw-r--r--. 1 boincer umatlas        27 Jun  3 16:38 wrapper_checkpoint.txt
[2025-06-03 16:38:45] -rw-------. 1 boincer umatlas      4476 Jun  3 16:38 pilotlog.txt
[2025-06-03 16:38:45] -rw-------. 1 boincer umatlas    883742 Jun  3 16:38 log.45006595._039716.job.log.1
[2025-06-03 16:38:45] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 16:38 boinc_mmap_file
[2025-06-03 16:38:45] -rw-------. 1 boincer umatlas       357 Jun  3 16:38 output.list
[2025-06-03 16:38:45] -rw-r--r--. 1 boincer umatlas       620 Jun  3 16:38 runtime_log
[2025-06-03 16:38:45] -rw-------. 1 boincer umatlas   1249280 Jun  3 16:38 result.tar.gz
[2025-06-03 16:38:45] -rw-r--r--. 1 boincer umatlas      8649 Jun  3 16:38 runtime_log.err
[2025-06-03 16:38:45] -rw-------. 1 boincer umatlas       651 Jun  3 16:38 jhjNDmTAkg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOElKDmi76a4n.diag
[2025-06-03 16:38:45] -rw-r--r--. 1 boincer umatlas     20766 Jun  3 16:38 stderr.txt
[2025-06-03 16:38:45] HITS file was successfully produced:
[2025-06-03 16:38:45] -rw-------. 1 boincer umatlas 177026252 Jun  3 16:37 shared/HITS.pool.root.1
[2025-06-03 16:38:45]  *** Contents of shared directory: ***
[2025-06-03 16:38:45] total 385528
[2025-06-03 16:38:45] -rw-r--r--. 2 boincer umatlas 215961956 Jun  3 13:58 ATLAS.root_0
[2025-06-03 16:38:45] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:58 start_atlas.sh
[2025-06-03 16:38:45] -rw-r--r--. 2 boincer umatlas    508876 Jun  3 13:58 input.tar.gz
[2025-06-03 16:38:45] -rw-------. 1 boincer umatlas 177026252 Jun  3 16:37 HITS.pool.root.1
[2025-06-03 16:38:45] -rw-------. 1 boincer umatlas   1249280 Jun  3 16:38 result.tar.gz
16:38:46 (582439): run_atlas exited; CPU time 42370.966296
16:38:46 (582439): called boinc_finish(0)

</stderr_txt>
]]>

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