| Name | u7VKDmVtig7n9Rq4apOajLDm4fhM0noT9bVof3QYDmS5YKDmT8sx4n_1 |
| Workunit | 232823733 |
| Created | 3 Jun 2025, 17:00:03 UTC |
| Sent | 3 Jun 2025, 17:59:00 UTC |
| Report deadline | 11 Jun 2025, 17:59:00 UTC |
| Received | 4 Jun 2025, 17:05:59 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 10874980 |
| Run time | 1 hours 37 min 2 sec |
| CPU time | 22 hours 25 min 29 sec |
| Validate state | Valid |
| Credit | 108.74 |
| Device peak FLOPS | 12.00 GFLOPS |
| Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 2.67 GB |
| Peak swap size | 3.02 GB |
| Peak disk usage | 964.04 MB |
Stderr output
<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:59:21 (2342436): wrapper (7.7.26015): starting
13:59:21 (2342436): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 13:59:21] Arguments: --nthreads 8
[2025-06-03 13:59:21] Threads: 8
[2025-06-03 13:59:21] Checking for CVMFS
[2025-06-03 13:59:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:59:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:59:22] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:59:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:59:22] 2.12.6.0 2648775 90017 194868 146750 2 196 24440366 25181185 1538 16776704 1 463899322 99.495 640528665 23892 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 13:59:22] CVMFS is ok
[2025-06-03 13:59:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 13:59:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 13:59:22] Further information can be found at the LHC@home message board.
[2025-06-03 13:59:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:59:22] Checking for apptainer binary...
[2025-06-03 13:59:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:59:22] Running /usr/bin/apptainer --version
[2025-06-03 13:59:22] apptainer version 1.4.1-1.el9
[2025-06-03 13:59:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:59:22] c-16-35.aglt2.org
[2025-06-03 13:59:22] apptainer works
[2025-06-03 13:59:22] Set ATHENA_PROC_NUMBER=8
[2025-06-03 13:59:22] Set ATHENA_CORE_NUMBER=8
[2025-06-03 13:59:22] Starting ATLAS job with PandaID=6677677394
[2025-06-03 13:59:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
11:36:10 (10684): wrapper (7.7.26015): starting
11:36:10 (10684): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 11:36:10] Arguments: --nthreads 8
[2025-06-04 11:36:10] Threads: 8
[2025-06-04 11:36:10] This job has been restarted, cleaning up previous attempt
[2025-06-04 11:36:10] Checking for CVMFS
[2025-06-04 11:36:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:36:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:36:10] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:36:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:36:10] 2.12.6.0 7432 1 30448 146786 2 1 22066732 25181185 0 16776704 0 2 66.667 1290 51600 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 11:36:10] CVMFS is ok
[2025-06-04 11:36:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 11:36:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 11:36:10] Further information can be found at the LHC@home message board.
[2025-06-04 11:36:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:36:10] Checking for apptainer binary...
[2025-06-04 11:36:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:36:10] Running /usr/bin/apptainer --version
[2025-06-04 11:36:11] apptainer version 1.4.1-1.el9
[2025-06-04 11:36:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:36:12] c-16-35.aglt2.org
[2025-06-04 11:36:12] apptainer works
[2025-06-04 11:36:12] Set ATHENA_PROC_NUMBER=8
[2025-06-04 11:36:12] Set ATHENA_CORE_NUMBER=8
[2025-06-04 11:36:12] Starting ATLAS job with PandaID=6677677394
[2025-06-04 11:36:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:39:20] Job failed
[2025-06-04 11:39:20] ++ pwd
[2025-06-04 11:39:20] + export RUNTIME_CONFIG_DIR=/tmp/boinchome/slots/1/
[2025-06-04 11:39:20] + RUNTIME_CONFIG_DIR=/tmp/boinchome/slots/1/
[2025-06-04 11:39:20] + mv ATLAS.root_0 EVNT.45006593._001495.pool.root.1
[2025-06-04 11:39:20] mv: ‘ATLAS.root_0’ and ‘EVNT.45006593._001495.pool.root.1’ are the same file
[2025-06-04 11:39:20] + tar --strip-components=5 -xvf input.tar.gz
[2025-06-04 11:39:20] + umask 077
[2025-06-04 11:39:20] ++ date +%s
[2025-06-04 11:39:20] + ACCOUNTING_STARTTIME=1749051372
[2025-06-04 11:39:20] + echo 'Detecting resource accounting method available for the job.'
[2025-06-04 11:39:20] Detecting resource accounting method available for the job.
[2025-06-04 11:39:20] + JOB_ACCOUNTING=
[2025-06-04 11:39:20] + command -v arc-job-cgroup
[2025-06-04 11:39:20] + '[' -z '' ']'
[2025-06-04 11:39:20] + GNU_TIME=/usr/bin/time
[2025-06-04 11:39:20] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2025-06-04 11:39:20] Looking for /usr/bin/time tool for accounting measurements
[2025-06-04 11:39:20] + '[' '!' -z /usr/bin/time ']'
[2025-06-04 11:39:20] + /usr/bin/time --version
[2025-06-04 11:39:20] + echo 'GNU time found and will be used for job accounting.'
[2025-06-04 11:39:20] GNU time found and will be used for job accounting.
[2025-06-04 11:39:20] + JOB_ACCOUNTING=gnutime
[2025-06-04 11:39:20] + '[' -z gnutime ']'
[2025-06-04 11:39:20] + export PANDA_JSID=harvester-CERN_central_ACTA
[2025-06-04 11:39:20] + PANDA_JSID=harvester-CERN_central_ACTA
[2025-06-04 11:39:20] + export GTAG=http://aipanda403.cern.ch/data/jobs/2025-06-03/BOINC_MCORE/6677677394.out
[2025-06-04 11:39:20] + GTAG=http://aipanda403.cern.ch/data/jobs/2025-06-03/BOINC_MCORE/6677677394.out
[2025-06-04 11:39:20] + export PILOT_NOKILL=YES
[2025-06-04 11:39:20] + PILOT_NOKILL=YES
[2025-06-04 11:39:20] + export GRID_GLOBAL_JOBID=u7VKDmVtig7n9Rq4apOajLDm4fhM0noT9bVof3QYDmS5YKDmT8sx4n
[2025-06-04 11:39:20] + GRID_GLOBAL_JOBID=u7VKDmVtig7n9Rq4apOajLDm4fhM0noT9bVof3QYDmS5YKDmT8sx4n
[2025-06-04 11:39:20] + export GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/u7VKDmVtig7n9Rq4apOajLDm4fhM0noT9bVof3QYDmS5YKDmT8sx4n
[2025-06-04 11:39:20] + GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/u7VKDmVtig7n9Rq4apOajLDm4fhM0noT9bVof3QYDmS5YKDmT8sx4n
[2025-06-04 11:39:20] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-06-04 11:39:20] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-06-04 11:39:20] + export GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2025-06-04 11:39:20] + GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2025-06-04 11:39:20] ++ pwd
[2025-06-04 11:39:20] + RUNTIME_JOB_DIR=/tmp/boinchome/slots/1
[2025-06-04 11:39:20] + RUNTIME_JOB_STDIN=/dev/null
[2025-06-04 11:39:20] ++ pwd
[2025-06-04 11:39:20] + RUNTIME_JOB_STDOUT=/tmp/boinchome/slots/1/log.45006595._037204.job.log.1
[2025-06-04 11:39:20] ++ pwd
[2025-06-04 11:39:20] + RUNTIME_JOB_STDERR=/tmp/boinchome/slots/1/log.45006595._037204.job.log.1
[2025-06-04 11:39:20] ++ pwd
[2025-06-04 11:39:20] + RUNTIME_JOB_DIAG=/tmp/boinchome/slots/1.diag
[2025-06-04 11:39:20] + '[' '!' -z '' ']'
[2025-06-04 11:39:20] + RUNTIME_LOCAL_SCRATCH_DIR=
[2025-06-04 11:39:20] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2025-06-04 11:39:20] + RUNTIME_FRONTEND_SEES_NODE=
[2025-06-04 11:39:20] + RUNTIME_NODE_SEES_FRONTEND=yes
[2025-06-04 11:39:20] + '[' '!' -z '' ']'
[2025-06-04 11:39:20] + '[' -z yes ']'
[2025-06-04 11:39:20] ++ pwd
[2025-06-04 11:39:20] + RUNTIME_JOB_DIAG=/tmp/boinchome/slots/1/u7VKDmVtig7n9Rq4apOajLDm4fhM0noT9bVof3QYDmS5YKDmT8sx4n.diag
[2025-06-04 11:39:20] + runtimeenvironments=
[2025-06-04 11:39:20] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-06-04 11:39:20] + RTE_function_0 1
[2025-06-04 11:39:20] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-06-04 11:39:20] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-06-04 11:39:20] + export BOINC_APP=ATLAS
[2025-06-04 11:39:20] + BOINC_APP=ATLAS
[2025-06-04 11:39:20] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-06-04 11:39:20] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-06-04 11:39:20] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-06-04 11:39:20] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-06-04 11:39:20] + '[' -z 1 ']'
[2025-06-04 11:39:20] + '[' 1 == 1 ']'
[2025-06-04 11:39:20] + shift
[2025-06-04 11:39:20] + export ATLAS_LOCAL_AREA=/tmp/boinchome/slots/1/
[2025-06-04 11:39:20] + ATLAS_LOCAL_AREA=/tmp/boinchome/slots/1/
[2025-06-04 11:39:20] + '[' 0 -ne 0 ']'
[2025-06-04 11:39:20] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2025-06-04 11:39:20] + '[' -f /etc/os-release ']'
[2025-06-04 11:39:20] +++ cat /etc/os-release
[2025-06-04 11:39:20] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2025-06-04 11:39:20] +++ NAME='CentOS Linux'
[2025-06-04 11:39:20] +++ VERSION='7 (Core)'
[2025-06-04 11:39:20] +++ ID=centos
[2025-06-04 11:39:20] +++ ID_LIKE='rhel fedora'
[2025-06-04 11:39:20] +++ VERSION_ID=7
[2025-06-04 11:39:20] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2025-06-04 11:39:20] +++ ANSI_COLOR='0;31'
[2025-06-04 11:39:20] +++ CPE_NAME=cpe:/o:centos:centos:7
[2025-06-04 11:39:20] +++ HOME_URL=https://www.centos.org/
[2025-06-04 11:39:20] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2025-06-04 11:39:20] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2025-06-04 11:39:20] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2025-06-04 11:39:20] +++ REDHAT_SUPPORT_PRODUCT=centos
[2025-06-04 11:39:20] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2025-06-04 11:39:20] ++ echo 'CentOS Linux 7 (Core)'
[2025-06-04 11:39:20] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2025-06-04 11:39:20] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2025-06-04 11:39:20] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2025-06-04 11:39:20] + HOME=/tmp/boinchome/slots/1
[2025-06-04 11:39:20] + export HOME
[2025-06-04 11:39:20] + cd /tmp/boinchome/slots/1
[2025-06-04 11:39:20] + '[' '!' -z '' ']'
[2025-06-04 11:39:20] + '[' -z '' ']'
[2025-06-04 11:39:20] ++ /bin/hostname -f
[2025-06-04 11:39:20] + nodename=c-16-35.aglt2.org
[2025-06-04 11:39:20] + echo nodename=c-16-35.aglt2.org
[2025-06-04 11:39:20] + echo Processors=2
[2025-06-04 11:39:20] + echo Nodecount=1
[2025-06-04 11:39:20] + echo Benchmark=HEPSPEC:1.0
[2025-06-04 11:39:20] + executable=./runpilot2-wrapper.sh
[2025-06-04 11:39:20] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2025-06-04 11:39:20] ++ dd if=./runpilot2-wrapper.sh count=1
[2025-06-04 11:39:20] ++ head -n 1
[2025-06-04 11:39:20] ++ tr -d '\0'
[2025-06-04 11:39:20] + line1='#!/bin/bash'
[2025-06-04 11:39:20] ++ echo '#!/bin/bash'
[2025-06-04 11:39:20] ++ sed -n 's/^#! *//p'
[2025-06-04 11:39:20] + shebang=/bin/bash
[2025-06-04 11:39:20] ++ echo /bin/bash
[2025-06-04 11:39:20] ++ awk '{print $1}'
[2025-06-04 11:39:20] + interpreter=/bin/bash
[2025-06-04 11:39:20] + '[' /bin/bash = /usr/bin/env ']'
[2025-06-04 11:39:20] + '[' x/bin/bash = x ']'
[2025-06-04 11:39:20] + type /bin/bash
[2025-06-04 11:39:20] + '[' xgnutime = xgnutime ']'
[2025-06-04 11:39:20] + /usr/bin/time -o /tmp/boinchome/slots/1/u7VKDmVtig7n9Rq4apOajLDm4fhM0noT9bVof3QYDmS5YKDmT8sx4n.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.10.2.2 -z -t --piloturl local --mute --container
[2025-06-04 11:39:20] + RESULT=2
[2025-06-04 11:39:20] + sed -i -e /nodename=/d /tmp/boinchome/slots/1/u7VKDmVtig7n9Rq4apOajLDm4fhM0noT9bVof3QYDmS5YKDmT8sx4n.diag
[2025-06-04 11:39:20] ++ grep domain_name init_data.xml
[2025-06-04 11:39:20] ++ awk -F '>' '{print $2}'
[2025-06-04 11:39:20] ++ awk -F '<' '{print $1}'
[2025-06-04 11:39:20] ++ sed -e 's# #_#g'
[2025-06-04 11:39:20] + hostname=c-16-35.aglt2.org
[2025-06-04 11:39:20] ++ grep user_name init_data.xml
[2025-06-04 11:39:20] ++ awk -F '>' '{print $2}'
[2025-06-04 11:39:20] ++ awk -F '<' '{print $1}'
[2025-06-04 11:39:20] ++ sed -e 's# #_#g'
[2025-06-04 11:39:20] + username=AGLT2
[2025-06-04 11:39:20] + nodename=AGLT2@c-16-35.aglt2.org
[2025-06-04 11:39:20] + echo nodename=AGLT2@c-16-35.aglt2.org
[2025-06-04 11:39:20] + '[' -n 8 ']'
[2025-06-04 11:39:20] + sed -i -e s/Processors=1/Processors=8/ /tmp/boinchome/slots/1/u7VKDmVtig7n9Rq4apOajLDm4fhM0noT9bVof3QYDmS5YKDmT8sx4n.diag
[2025-06-04 11:39:20] + echo exitcode=2
[2025-06-04 11:39:20] + runtimeenvironments=
[2025-06-04 11:39:20] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-06-04 11:39:20] + RTE_function_0 2
[2025-06-04 11:39:20] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-06-04 11:39:20] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-06-04 11:39:20] + export BOINC_APP=ATLAS
[2025-06-04 11:39:20] + BOINC_APP=ATLAS
[2025-06-04 11:39:20] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-06-04 11:39:20] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-06-04 11:39:20] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-06-04 11:39:20] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-06-04 11:39:20] + '[' -z 2 ']'
[2025-06-04 11:39:20] + '[' 2 == 1 ']'
[2025-06-04 11:39:20] + '[' 0 -ne 0 ']'
[2025-06-04 11:39:20] + echo 'zip all output files'
[2025-06-04 11:39:20] + flist='*.diag '
[2025-06-04 11:39:20] + for f in ./heartbeat.json ./output.list ./log.45006595._037204.job.log.1 ./log.45006595._037204.job.log.1 ./gmlog/
[2025-06-04 11:39:20] + '[' -e ./heartbeat.json ']'
[2025-06-04 11:39:20] + flist='*.diag ./heartbeat.json'
[2025-06-04 11:39:20] + for f in ./heartbeat.json ./output.list ./log.45006595._037204.job.log.1 ./log.45006595._037204.job.log.1 ./gmlog/
[2025-06-04 11:39:20] + '[' -e ./output.list ']'
[2025-06-04 11:39:20] + for f in ./heartbeat.json ./output.list ./log.45006595._037204.job.log.1 ./log.45006595._037204.job.log.1 ./gmlog/
[2025-06-04 11:39:20] + '[' -e ./log.45006595._037204.job.log.1 ']'
[2025-06-04 11:39:20] + flist='*.diag ./heartbeat.json ./log.45006595._037204.job.log.1'
[2025-06-04 11:39:20] + for f in ./heartbeat.json ./output.list ./log.45006595._037204.job.log.1 ./log.45006595._037204.job.log.1 ./gmlog/
[2025-06-04 11:39:20] + '[' -e ./log.45006595._037204.job.log.1 ']'
[2025-06-04 11:39:20] + flist='*.diag ./heartbeat.json ./log.45006595._037204.job.log.1 ./log.45006595._037204.job.log.1'
[2025-06-04 11:39:20] + for f in ./heartbeat.json ./output.list ./log.45006595._037204.job.log.1 ./log.45006595._037204.job.log.1 ./gmlog/
[2025-06-04 11:39:20] + '[' -e ./gmlog/ ']'
[2025-06-04 11:39:20] + '[' -f output.list ']'
[2025-06-04 11:39:20] + tar cvf result.tar.gz u7VKDmVtig7n9Rq4apOajLDm4fhM0noT9bVof3QYDmS5YKDmT8sx4n.diag ./heartbeat.json ./log.45006595._037204.job.log.1 ./log.45006595._037204.job.log.1
[2025-06-04 11:39:20] + '[' xgnutime = xcgroup ']'
[2025-06-04 11:39:20] + '[' -n '' ']'
[2025-06-04 11:39:20] + '[' -n '' ']'
[2025-06-04 11:39:20] ++ date +%s
[2025-06-04 11:39:20] + ACCOUNTING_ENDTIME=1749051560
[2025-06-04 11:39:20] ++ date -d '1970-01-01 UTC 1749051372 seconds' +%Y%m%d%H%M%SZ
[2025-06-04 11:39:20] + echo LRMSStartTime=20250604113612Z
[2025-06-04 11:39:20] ++ date -d '1970-01-01 UTC 1749051560 seconds' +%Y%m%d%H%M%SZ
[2025-06-04 11:39:20] + echo LRMSEndTime=20250604113920Z
[2025-06-04 11:39:20] + echo walltime=188
[2025-06-04 11:39:20] + echo exitcode=2
[2025-06-04 11:39:20] + exit 2
[2025-06-04 11:39:20] ./runtime_log.err
[2025-06-04 11:39:20] ./log.45006595._037204.job.log.tgz.1
[2025-06-04 11:39:20] ./pilotlog.txt
[2025-06-04 11:39:20] ./runtime_log
[2025-06-04 11:39:20] ./log.45006595._037204.job.log.1
[2025-06-04 11:39:20] ./PanDA_Pilot-6677677394/prmon.log
[2025-06-04 11:39:20] ./PanDA_Pilot-6677677394/pilotlog.txt
[2025-06-04 11:39:20] ./PanDA_Pilot-6677677394/log.EVNTtoHITS
[2025-06-04 11:39:20] ./PanDA_Pilot-6677677394/PoolFileCatalog.xml
[2025-06-04 11:39:20] ./pilot3/pilot/util/realtimelogger.py
[2025-06-04 11:39:20] ./pilot3/pilot/util/lokirealtimelogger.py
[2025-06-04 11:39:20] ./pilot3/pilot/util/loggingsupport.py
[2025-06-04 11:39:20] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2025-06-04 11:39:20] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2025-06-04 11:39:20] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
11:49:20 (86263): wrapper (7.7.26015): starting
11:49:20 (86263): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 11:49:20] Arguments: --nthreads 8
[2025-06-04 11:49:20] Threads: 8
[2025-06-04 11:49:20] This job has been restarted, cleaning up previous attempt
[2025-06-04 11:49:20] Checking for CVMFS
[2025-06-04 11:49:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:49:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:49:20] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:49:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:49:21] 2.12.6.0 7432 14 55080 146786 1 187 23005276 25181185 0 16776704 0 197933 97.868 341225 55673 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 11:49:21] CVMFS is ok
[2025-06-04 11:49:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 11:49:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 11:49:21] Further information can be found at the LHC@home message board.
[2025-06-04 11:49:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:49:21] Checking for apptainer binary...
[2025-06-04 11:49:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:49:21] Running /usr/bin/apptainer --version
[2025-06-04 11:49:21] apptainer version 1.4.1-1.el9
[2025-06-04 11:49:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:49:21] c-16-35.aglt2.org
[2025-06-04 11:49:21] apptainer works
[2025-06-04 11:49:21] Set ATHENA_PROC_NUMBER=8
[2025-06-04 11:49:21] Set ATHENA_CORE_NUMBER=8
[2025-06-04 11:49:21] Starting ATLAS job with PandaID=6677677394
[2025-06-04 11:49:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 13:01:36] *** The last 200 lines of the pilot log: ***
[2025-06-04 13:01:36] is_tar=False
[2025-06-04 13:01:36] lfn=log.45006595._037204.job.log.tgz.1
[2025-06-04 13:01:36] mtime=0
[2025-06-04 13:01:36] protocol_id=None
[2025-06-04 13:01:36] protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 13:01:36] replicas=None
[2025-06-04 13:01:36] scope=mc23_13p6TeV
[2025-06-04 13:01:36] status=None
[2025-06-04 13:01:36] status_code=0
[2025-06-04 13:01:36] storage_token=
[2025-06-04 13:01:36] surl=/tmp/boinchome/slots/1/PanDA_Pilot-6677677394/log.45006595._037204.job.log.tgz.1
[2025-06-04 13:01:36] turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/10/a9/log.45006595._037204.job.log.tgz.1
[2025-06-04 13:01:36] workdir=None
[2025-06-04 13:01:36] ]
[2025-06-04 13:01:36] 2025-06-04 17:01:10,164 | INFO | transferring file log.45006595._037204.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6677677394/log.45006595._037204.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 13:01:36] 2025-06-04 17:01:10,164 | INFO | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6677677394/log.45006595._037204.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._037204.job
[2025-06-04 13:01:36] 2025-06-04 17:01:10,174 | INFO | adding to output.list: log.45006595._037204.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/10/a9/log.45006595._037204.job.log.tg
[2025-06-04 13:01:36] 2025-06-04 17:01:10,174 | INFO | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 13:01:36] 2025-06-04 17:01:10,174 | INFO | summary of transferred files:
[2025-06-04 13:01:36] 2025-06-04 17:01:10,174 | INFO | -- lfn=log.45006595._037204.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 13:01:36] 2025-06-04 17:01:10,174 | INFO | stage-out finished correctly
[2025-06-04 13:01:36] 2025-06-04 17:01:11,503 | INFO | monitor loop #322: job 0:6677677394 is in state 'finished'
[2025-06-04 13:01:36] 2025-06-04 17:01:11,503 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:01:36] 2025-06-04 17:01:13,447 | INFO | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 13:01:36] 2025-06-04 17:01:14,016 | INFO | monitor loop #323: job 0:6677677394 is in state 'finished'
[2025-06-04 13:01:36] 2025-06-04 17:01:14,016 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:01:36] 2025-06-04 17:01:14,538 | INFO | job 6677677394 has state=finished
[2025-06-04 13:01:36] 2025-06-04 17:01:14,538 | INFO | preparing for final server update for job 6677677394 in state='finished'
[2025-06-04 13:01:36] 2025-06-04 17:01:14,538 | INFO | this job has now completed (state=finished)
[2025-06-04 13:01:36] 2025-06-04 17:01:14,539 | INFO | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 13:01:36] 2025-06-04 17:01:14,539 | INFO | log transfer has been attempted: DONE
[2025-06-04 13:01:36] 2025-06-04 17:01:14,539 | INFO | job 6677677394 has finished - writing final server update
[2025-06-04 13:01:36] 2025-06-04 17:01:14,539 | INFO | total number of processed events: 400 (read)
[2025-06-04 13:01:36] 2025-06-04 17:01:14,553 | INFO | executing command: lscpu
[2025-06-04 13:01:36] 2025-06-04 17:01:14,603 | INFO | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 13:01:36] 2025-06-04 17:01:16,519 | INFO | monitor loop #324: job 0:6677677394 is in state 'finished'
[2025-06-04 13:01:36] 2025-06-04 17:01:16,531 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:01:36] 2025-06-04 17:01:17,033 | INFO | CPU arch script returned: x86-64-v3
[2025-06-04 13:01:36] 2025-06-04 17:01:17,033 | INFO | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677677394/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:01:36] 2025-06-04 17:01:17,034 | INFO | extracted standard info from prmon json
[2025-06-04 13:01:36] 2025-06-04 17:01:17,034 | INFO | extracted standard memory fields from prmon json
[2025-06-04 13:01:36] 2025-06-04 17:01:17,034 | WARNING | GPU info not found in prmon json: 'gpu'
[2025-06-04 13:01:36] 2025-06-04 17:01:17,034 | WARNING | format EVNTtoHITS has no such key: dbData
[2025-06-04 13:01:36] 2025-06-04 17:01:17,034 | WARNING | format EVNTtoHITS has no such key: dbTime
[2025-06-04 13:01:36] 2025-06-04 17:01:17,035 | INFO | fitting pss+swap vs Time
[2025-06-04 13:01:36] 2025-06-04 17:01:17,036 | INFO | sum of square deviations: 81266640.0
[2025-06-04 13:01:36] 2025-06-04 17:01:17,036 | INFO | sum of deviations: -2073162988.5
[2025-06-04 13:01:36] 2025-06-04 17:01:17,036 | INFO | mean x: 1749054412.5
[2025-06-04 13:01:36] 2025-06-04 17:01:17,036 | INFO | mean y: 2193940.984375
[2025-06-04 13:01:36] 2025-06-04 17:01:17,036 | INFO | -- intersect: 44621669692.25958
[2025-06-04 13:01:36] 2025-06-04 17:01:17,036 | INFO | intersect: 44621669692.25958
[2025-06-04 13:01:36] 2025-06-04 17:01:17,036 | INFO | chi2: 0.024820876296459717
[2025-06-04 13:01:36] 2025-06-04 17:01:17,036 | INFO | -- intersect: 44621669692.25958
[2025-06-04 13:01:36] 2025-06-04 17:01:17,036 | INFO | current memory leak: -25.51 B/s (using 64 data points, chi2=0.02)
[2025-06-04 13:01:36] 2025-06-04 17:01:17,037 | INFO | ..............................
[2025-06-04 13:01:36] 2025-06-04 17:01:17,037 | INFO | . Timing measurements:
[2025-06-04 13:01:36] 2025-06-04 17:01:17,037 | INFO | . get job = 0 s
[2025-06-04 13:01:36] 2025-06-04 17:01:17,037 | INFO | . initial setup = 0 s
[2025-06-04 13:01:36] 2025-06-04 17:01:17,037 | INFO | . payload setup = 3 s
[2025-06-04 13:01:36] 2025-06-04 17:01:17,037 | INFO | . stage-in = 0 s
[2025-06-04 13:01:36] 2025-06-04 17:01:17,037 | INFO | . payload execution = 4281 s
[2025-06-04 13:01:36] 2025-06-04 17:01:17,037 | INFO | . stage-out = 0 s
[2025-06-04 13:01:36] 2025-06-04 17:01:17,037 | INFO | . log creation = 0 s
[2025-06-04 13:01:36] 2025-06-04 17:01:17,037 | INFO | ..............................
[2025-06-04 13:01:36] 2025-06-04 17:01:17,088 | INFO |
[2025-06-04 13:01:36] 2025-06-04 17:01:17,088 | INFO | job summary report
[2025-06-04 13:01:36] 2025-06-04 17:01:17,088 | INFO | --------------------------------------------------
[2025-06-04 13:01:36] 2025-06-04 17:01:17,088 | INFO | PanDA job id: 6677677394
[2025-06-04 13:01:36] 2025-06-04 17:01:17,088 | INFO | task id: 45006595
[2025-06-04 13:01:36] 2025-06-04 17:01:17,088 | INFO | errors: (none)
[2025-06-04 13:01:36] 2025-06-04 17:01:17,089 | INFO | status: LOG_TRANSFER = DONE
[2025-06-04 13:01:36] 2025-06-04 17:01:17,089 | INFO | pilot state: finished
[2025-06-04 13:01:36] 2025-06-04 17:01:17,089 | INFO | transexitcode: 0
[2025-06-04 13:01:36] 2025-06-04 17:01:17,089 | INFO | exeerrorcode: 0
[2025-06-04 13:01:36] 2025-06-04 17:01:17,089 | INFO | exeerrordiag:
[2025-06-04 13:01:36] 2025-06-04 17:01:17,089 | INFO | exitcode: 0
[2025-06-04 13:01:36] 2025-06-04 17:01:17,089 | INFO | exitmsg: OK
[2025-06-04 13:01:36] 2025-06-04 17:01:17,089 | INFO | cpuconsumptiontime: 32453 s
[2025-06-04 13:01:36] 2025-06-04 17:01:17,089 | INFO | nevents: 400
[2025-06-04 13:01:36] 2025-06-04 17:01:17,089 | INFO | neventsw: 0
[2025-06-04 13:01:36] 2025-06-04 17:01:17,089 | INFO | pid: 126476
[2025-06-04 13:01:36] 2025-06-04 17:01:17,089 | INFO | pgrp: 126476
[2025-06-04 13:01:36] 2025-06-04 17:01:17,089 | INFO | corecount: 8
[2025-06-04 13:01:36] 2025-06-04 17:01:17,089 | INFO | event service: False
[2025-06-04 13:01:36] 2025-06-04 17:01:17,089 | INFO | sizes: {0: 2397336, 2: 2397542, 10: 2397570, 4288: 2423588, 4290: 2432529, 4293: 2432585, 4297: 2432883}
[2025-06-04 13:01:36] 2025-06-04 17:01:17,089 | INFO | --------------------------------------------------
[2025-06-04 13:01:36] 2025-06-04 17:01:17,089 | INFO |
[2025-06-04 13:01:36] 2025-06-04 17:01:17,089 | INFO | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 13:01:36] 2025-06-04 17:01:17,099 | INFO | queue jobs had 0 job(s) [purged]
[2025-06-04 13:01:36] 2025-06-04 17:01:17,100 | INFO | queue payloads had 0 job(s) [purged]
[2025-06-04 13:01:36] 2025-06-04 17:01:17,100 | INFO | queue data_in had 0 job(s) [purged]
[2025-06-04 13:01:36] 2025-06-04 17:01:17,100 | INFO | queue data_out had 0 job(s) [purged]
[2025-06-04 13:01:36] 2025-06-04 17:01:17,100 | INFO | queue current_data_in had 0 job(s) [purged]
[2025-06-04 13:01:36] 2025-06-04 17:01:17,100 | INFO | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 13:01:36] 2025-06-04 17:01:17,100 | INFO | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 13:01:36] 2025-06-04 17:01:17,100 | INFO | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 13:01:36] 2025-06-04 17:01:17,100 | INFO | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 13:01:36] 2025-06-04 17:01:17,100 | INFO | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 13:01:36] 2025-06-04 17:01:17,100 | INFO | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 13:01:36] 2025-06-04 17:01:17,100 | INFO | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 13:01:36] 2025-06-04 17:01:17,100 | INFO | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 13:01:36] 2025-06-04 17:01:17,100 | INFO | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 13:01:36] 2025-06-04 17:01:17,101 | INFO | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 13:01:36] 2025-06-04 17:01:17,101 | INFO | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 13:01:36] 2025-06-04 17:01:17,101 | INFO | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 13:01:36] 2025-06-04 17:01:17,101 | INFO | queue completed_jobids has 1 job(s)
[2025-06-04 13:01:36] 2025-06-04 17:01:17,101 | INFO | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 13:01:36] 2025-06-04 17:01:17,101 | INFO | queue messages had 0 job(s) [purged]
[2025-06-04 13:01:36] 2025-06-04 17:01:17,101 | INFO | job 6677677394 has completed (purged errors)
[2025-06-04 13:01:36] 2025-06-04 17:01:17,101 | INFO | overall cleanup function is called
[2025-06-04 13:01:36] 2025-06-04 17:01:18,108 | INFO | --- collectZombieJob: --- 10, [126476]
[2025-06-04 13:01:36] 2025-06-04 17:01:18,108 | INFO | zombie collector waiting for pid 126476
[2025-06-04 13:01:36] 2025-06-04 17:01:18,108 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 13:01:36] 2025-06-04 17:01:18,108 | INFO | collected zombie processes
[2025-06-04 13:01:36] 2025-06-04 17:01:18,108 | INFO | will attempt to kill all subprocesses of pid=126476
[2025-06-04 13:01:36] 2025-06-04 17:01:18,253 | INFO | process IDs to be killed: [126476] (in reverse order)
[2025-06-04 13:01:36] 2025-06-04 17:01:18,291 | WARNING | found no corresponding commands to process id(s)
[2025-06-04 13:01:36] 2025-06-04 17:01:18,291 | INFO | Do not look for orphan processes in BOINC jobs
[2025-06-04 13:01:36] 2025-06-04 17:01:18,295 | INFO | did not find any defunct processes belonging to 126476
[2025-06-04 13:01:36] 2025-06-04 17:01:18,298 | INFO | did not find any defunct processes belonging to 126476
[2025-06-04 13:01:36] 2025-06-04 17:01:18,298 | INFO | ready for new job
[2025-06-04 13:01:36] 2025-06-04 17:01:18,298 | INFO | pilot has finished with previous job - re-establishing logging
[2025-06-04 13:01:36] 2025-06-04 17:01:18,299 | INFO | **************************************
[2025-06-04 13:01:36] 2025-06-04 17:01:18,299 | INFO | *** PanDA Pilot version 3.10.2.2 ***
[2025-06-04 13:01:36] 2025-06-04 17:01:18,299 | INFO | **************************************
[2025-06-04 13:01:36] 2025-06-04 17:01:18,299 | INFO |
[2025-06-04 13:01:36] 2025-06-04 17:01:18,312 | INFO | architecture information:
[2025-06-04 13:01:36] 2025-06-04 17:01:18,313 | INFO | executing command: cat /etc/os-release
[2025-06-04 13:01:36] 2025-06-04 17:01:18,320 | INFO | cat /etc/os-release:
[2025-06-04 13:01:36] NAME="CentOS Linux"
[2025-06-04 13:01:36] VERSION="7 (Core)"
[2025-06-04 13:01:36] ID="centos"
[2025-06-04 13:01:36] ID_LIKE="rhel fedora"
[2025-06-04 13:01:36] VERSION_ID="7"
[2025-06-04 13:01:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 13:01:36] ANSI_COLOR="0;31"
[2025-06-04 13:01:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 13:01:36] HOME_URL="https://www.centos.org/"
[2025-06-04 13:01:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 13:01:36]
[2025-06-04 13:01:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 13:01:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 13:01:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 13:01:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 13:01:36]
[2025-06-04 13:01:36] 2025-06-04 17:01:18,321 | INFO | **************************************
[2025-06-04 13:01:36] 2025-06-04 17:01:18,824 | INFO | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 13:01:36] 2025-06-04 17:01:18,835 | INFO | sufficient remaining disk space (62990057472 B)
[2025-06-04 13:01:36] 2025-06-04 17:01:18,835 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 13:01:36] 2025-06-04 17:01:18,835 | INFO | current server update state: UPDATING_FINAL
[2025-06-04 13:01:36] 2025-06-04 17:01:18,835 | INFO | update_server=False
[2025-06-04 13:01:36] 2025-06-04 17:01:18,835 | WARNING | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 13:01:36] 2025-06-04 17:01:18,835 | WARNING | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 13:01:36] 2025-06-04 17:01:18,835 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:01:36] 2025-06-04 17:01:18,835 | WARNING | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 13:01:36] 2025-06-04 17:01:18,836 | INFO | found 0 job(s) in 20 queues
[2025-06-04 13:01:36] 2025-06-04 17:01:18,836 | WARNING | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 13:01:36] 2025-06-04 17:01:18,836 | WARNING | will wait for a maximum of 300 s for threads to finish
[2025-06-04 13:01:36] 2025-06-04 17:01:18,945 | INFO | all job control threads have been joined
[2025-06-04 13:01:36] 2025-06-04 17:01:19,034 | WARNING | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 13:01:36] 2025-06-04 17:01:19,034 | WARNING | cannot recover job monitoring - aborting pilot
[2025-06-04 13:01:36] 2025-06-04 17:01:19,034 | WARNING | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:01:36] 2025-06-04 17:01:19,034 | INFO | will abort loop
[2025-06-04 13:01:36] 2025-06-04 17:01:19,549 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 13:01:36] 2025-06-04 17:01:19,612 | INFO | all payload control threads have been joined
[2025-06-04 13:01:36] 2025-06-04 17:01:19,840 | INFO | [job] retrieve thread has finished
[2025-06-04 13:01:36] 2025-06-04 17:01:19,841 | INFO | [job] queue monitor thread has finished
[2025-06-04 13:01:36] 2025-06-04 17:01:19,933 | INFO | all data control threads have been joined
[2025-06-04 13:01:36] 2025-06-04 17:01:19,951 | INFO | [job] control thread has finished
[2025-06-04 13:01:36] 2025-06-04 17:01:19,990 | INFO | [payload] execute_payloads thread has finished
[2025-06-04 13:01:36] 2025-06-04 17:01:20,040 | INFO | [job] job monitor thread has finished
[2025-06-04 13:01:36] 2025-06-04 17:01:20,097 | INFO | [job] create_data_payload thread has finished
[2025-06-04 13:01:36] 2025-06-04 17:01:20,171 | INFO | [job] validate thread has finished
[2025-06-04 13:01:36] 2025-06-04 17:01:20,450 | INFO | [payload] validate_pre thread has finished
[2025-06-04 13:01:36] 2025-06-04 17:01:20,618 | INFO | [payload] control thread has finished
[2025-06-04 13:01:36] 2025-06-04 17:01:20,805 | INFO | [payload] validate_post thread has finished
[2025-06-04 13:01:36] 2025-06-04 17:01:20,841 | INFO | [data] copytool_out thread has finished
[2025-06-04 13:01:36] 2025-06-04 17:01:20,939 | INFO | [data] control thread has finished
[2025-06-04 13:01:36] 2025-06-04 17:01:20,984 | INFO | [payload] failed_post thread has finished
[2025-06-04 13:01:36] 2025-06-04 17:01:21,297 | INFO | [data] copytool_in thread has finished
[2025-06-04 13:01:36] 2025-06-04 17:01:23,555 | INFO | [data] queue_monitor thread has finished
[2025-06-04 13:01:36] 2025-06-04 17:01:29,775 | INFO | job.realtimelogging is not enabled
[2025-06-04 13:01:36] 2025-06-04 17:01:30,781 | INFO | [payload] run_realtimelog thread has finished
[2025-06-04 13:01:36] 2025-06-04 17:01:31,800 | INFO | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139933133006656)>', '<ExcThread(monitor, started 139932492351232)>']
[2025-06-04 13:01:36] 2025-06-04 17:01:31,902 | WARNING | job_aborted has been set - aborting pilot monitoring
[2025-06-04 13:01:36] 2025-06-04 17:01:31,902 | INFO | [monitor] control thread has ended
[2025-06-04 13:01:36] 2025-06-04 17:01:36,825 | INFO | all workflow threads have been joined
[2025-06-04 13:01:36] 2025-06-04 17:01:36,825 | INFO | end of generic workflow (traces error code: 0)
[2025-06-04 13:01:36] 2025-06-04 17:01:36,825 | INFO | traces error code: 0
[2025-06-04 13:01:36] 2025-06-04 17:01:36,826 | INFO | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 13:01:36] 2025-06-04 17:01:36,892 [wrapper] ==== pilot stdout END ====
[2025-06-04 13:01:36] 2025-06-04 17:01:36,894 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 13:01:36] 2025-06-04 17:01:36,896 [wrapper] pilotpid: 100698
[2025-06-04 13:01:36] 2025-06-04 17:01:36,898 [wrapper] Pilot exit status: 0
[2025-06-04 13:01:36] 2025-06-04 17:01:36,903 [wrapper] pandaids: 6677677394 6677677394 6677677394
[2025-06-04 13:01:36] 2025-06-04 17:01:36,930 [wrapper] cleanup supervisor_pilot 244397 100699
[2025-06-04 13:01:36] 2025-06-04 17:01:36,932 [wrapper] Test setup, not cleaning
[2025-06-04 13:01:36] 2025-06-04 17:01:36,933 [wrapper] apfmon messages muted
[2025-06-04 13:01:36] 2025-06-04 17:01:36,935 [wrapper] ==== wrapper stdout END ====
[2025-06-04 13:01:36] 2025-06-04 17:01:36,937 [wrapper] ==== wrapper stderr END ====
[2025-06-04 13:01:36] *** Error codes and diagnostics ***
[2025-06-04 13:01:36] "exeErrorCode": 0,
[2025-06-04 13:01:36] "exeErrorDiag": "",
[2025-06-04 13:01:36] "pilotErrorCode": 0,
[2025-06-04 13:01:36] "pilotErrorDiag": "",
[2025-06-04 13:01:36] *** Listing of results directory ***
[2025-06-04 13:01:36] total 598560
[2025-06-04 13:01:36] drwx------. 4 boincer umatlas 4096 Apr 3 04:00 pilot3
[2025-06-04 13:01:36] -rw-r--r--. 1 boincer umatlas 495897 Jun 3 11:35 pilot3.tar.gz
[2025-06-04 13:01:36] -rw-r--r--. 1 boincer umatlas 5111 Jun 3 11:37 queuedata.json
[2025-06-04 13:01:36] -rwx------. 1 boincer umatlas 37140 Jun 3 11:38 runpilot2-wrapper.sh
[2025-06-04 13:01:36] -rw-r--r--. 1 boincer umatlas 100 Jun 3 13:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 13:01:36] -rwxr-xr-x. 1 boincer umatlas 7986 Jun 3 13:59 run_atlas
[2025-06-04 13:01:36] -rw-r--r--. 1 boincer umatlas 105 Jun 3 13:59 job.xml
[2025-06-04 13:01:36] -rw-r--r--. 3 boincer umatlas 213856888 Jun 3 13:59 EVNT.45006593._001495.pool.root.1
[2025-06-04 13:01:36] -rw-r--r--. 3 boincer umatlas 213856888 Jun 3 13:59 ATLAS.root_0
[2025-06-04 13:01:36] -rw-r--r--. 2 boincer umatlas 15093 Jun 3 13:59 start_atlas.sh
[2025-06-04 13:01:36] -rw-r--r--. 2 boincer umatlas 508877 Jun 3 13:59 input.tar.gz
[2025-06-04 13:01:36] -rw-r--r--. 1 boincer umatlas 0 Jun 3 13:59 boinc_lockfile
[2025-06-04 13:01:36] -rw-------. 1 boincer umatlas 0 Jun 4 11:36 wrapper_sigint_25212
[2025-06-04 13:01:36] -rw-------. 1 boincer umatlas 1598969 Jun 4 11:36 agis_ddmendpoints.agis.ALL.json
[2025-06-04 13:01:36] -rw-------. 1 boincer umatlas 0 Jun 4 11:39 wrapper_sigkill_25212
[2025-06-04 13:01:36] drwxrwx--x. 2 boincer umatlas 4096 Jun 4 11:39 shared
[2025-06-04 13:01:36] -rw-r--r--. 1 boincer umatlas 2522 Jun 4 11:49 pandaJob.out
[2025-06-04 13:01:36] -rw-------. 1 boincer umatlas 990989 Jun 4 11:49 agis_schedconf.cvmfs.json
[2025-06-04 13:01:36] -rw-r--r--. 1 boincer umatlas 6611 Jun 4 12:54 init_data.xml
[2025-06-04 13:01:36] -rw-r--r--. 1 boincer umatlas 530 Jun 4 13:00 boinc_task_state.xml
[2025-06-04 13:01:36] -rw-------. 1 boincer umatlas 179922768 Jun 4 13:00 HITS.45006595._037204.pool.root.1
[2025-06-04 13:01:36] -rw-------. 1 boincer umatlas 98 Jun 4 13:00 pilot_heartbeat.json
[2025-06-04 13:01:36] -rw-------. 1 boincer umatlas 1038 Jun 4 13:01 memory_monitor_summary.json
[2025-06-04 13:01:36] -rw-------. 1 boincer umatlas 287215 Jun 4 13:01 log.45006595._037204.job.log.tgz.1
[2025-06-04 13:01:36] -rw-------. 1 boincer umatlas 7721 Jun 4 13:01 heartbeat.json
[2025-06-04 13:01:36] -rw-r--r--. 1 boincer umatlas 27 Jun 4 13:01 wrapper_checkpoint.txt
[2025-06-04 13:01:36] -rw-r--r--. 1 boincer umatlas 8192 Jun 4 13:01 boinc_mmap_file
[2025-06-04 13:01:36] -rw-------. 1 boincer umatlas 4734 Jun 4 13:01 pilotlog.txt
[2025-06-04 13:01:36] -rw-------. 1 boincer umatlas 427969 Jun 4 13:01 log.45006595._037204.job.log.1
[2025-06-04 13:01:36] -rw-------. 1 boincer umatlas 357 Jun 4 13:01 output.list
[2025-06-04 13:01:36] -rw-r--r--. 1 boincer umatlas 620 Jun 4 13:01 runtime_log
[2025-06-04 13:01:36] -rw-r--r--. 2 boincer umatlas 737280 Jun 4 13:01 result.tar.gz
[2025-06-04 13:01:36] -rw-------. 1 boincer umatlas 1877 Jun 4 13:01 u7VKDmVtig7n9Rq4apOajLDm4fhM0noT9bVof3QYDmS5YKDmT8sx4n.diag
[2025-06-04 13:01:36] -rw-r--r--. 1 boincer umatlas 8739 Jun 4 13:01 runtime_log.err
[2025-06-04 13:01:36] -rw-r--r--. 1 boincer umatlas 38759 Jun 4 13:01 stderr.txt
[2025-06-04 13:01:36] HITS file was successfully produced:
[2025-06-04 13:01:36] -rw-------. 1 boincer umatlas 179922768 Jun 4 13:00 shared/HITS.pool.root.1
[2025-06-04 13:01:36] *** Contents of shared directory: ***
[2025-06-04 13:01:36] total 385796
[2025-06-04 13:01:36] -rw-r--r--. 3 boincer umatlas 213856888 Jun 3 13:59 ATLAS.root_0
[2025-06-04 13:01:36] -rw-r--r--. 2 boincer umatlas 15093 Jun 3 13:59 start_atlas.sh
[2025-06-04 13:01:36] -rw-r--r--. 2 boincer umatlas 508877 Jun 3 13:59 input.tar.gz
[2025-06-04 13:01:36] -rw-------. 1 boincer umatlas 179922768 Jun 4 13:00 HITS.pool.root.1
[2025-06-04 13:01:36] -rw-r--r--. 2 boincer umatlas 737280 Jun 4 13:01 result.tar.gz
13:01:38 (86263): run_atlas exited; CPU time 32583.494496
13:01:38 (86263): called boinc_finish(0)
</stderr_txt>
]]>
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