Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:58:27 (1795005): wrapper (7.7.26015): starting
13:58:27 (1795005): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 13:58:27] Arguments: --nthreads 8
[2025-06-03 13:58:27] Threads: 8
[2025-06-03 13:58:27] Checking for CVMFS
[2025-06-03 13:58:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:58:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:58:27] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:58:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:58:27] 2.12.6.0 3581464 138412 230988 146750 3 187 25954054 32935936 3146 130560 0 357732370 99.603 381354390 28100 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 13:58:27] CVMFS is ok
[2025-06-03 13:58:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 13:58:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 13:58:27] Further information can be found at the LHC@home message board.
[2025-06-03 13:58:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:58:27] Checking for apptainer binary...
[2025-06-03 13:58:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:58:27] Running /usr/bin/apptainer --version
[2025-06-03 13:58:27] apptainer version 1.4.1-1.el9
[2025-06-03 13:58:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:58:27] c-6-6.aglt2.org
[2025-06-03 13:58:27] apptainer works
[2025-06-03 13:58:27] Set ATHENA_PROC_NUMBER=8
[2025-06-03 13:58:27] Set ATHENA_CORE_NUMBER=8
[2025-06-03 13:58:27] Starting ATLAS job with PandaID=6677677267
[2025-06-03 13:58:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 19:38:46]  *** The last 200 lines of the pilot log: ***
[2025-06-03 19:38:46] 2025-06-03 23:38:34,157 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677677267/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 19:38:46] 2025-06-03 23:38:34,157 | INFO     | extracted standard info from prmon json
[2025-06-03 19:38:46] 2025-06-03 23:38:34,158 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 19:38:46] 2025-06-03 23:38:34,158 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 19:38:46] 2025-06-03 23:38:34,158 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 19:38:46] 2025-06-03 23:38:34,158 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 19:38:46] 2025-06-03 23:38:34,165 | INFO     | fitting pss+swap vs Time
[2025-06-03 19:38:46] 2025-06-03 23:38:34,165 | INFO     | sum of square deviations: 11554284884.06
[2025-06-03 19:38:46] 2025-06-03 23:38:34,168 | INFO     | sum of deviations: 131889309633.29346
[2025-06-03 19:38:46] 2025-06-03 23:38:34,169 | INFO     | mean x: 1748983699.2994013
[2025-06-03 19:38:46] 2025-06-03 23:38:34,169 | INFO     | mean y: 2082025.9670658682
[2025-06-03 19:38:46] 2025-06-03 23:38:34,169 | INFO     | -- intersect: -19962135143.259163
[2025-06-03 19:38:46] 2025-06-03 23:38:34,169 | INFO     | intersect: -19962135143.259163
[2025-06-03 19:38:46] 2025-06-03 23:38:34,170 | INFO     | chi2: 3.7337137872080732
[2025-06-03 19:38:46] 2025-06-03 23:38:34,170 | INFO     | sum of square deviations: 11043221848.316
[2025-06-03 19:38:46] 2025-06-03 23:38:34,173 | INFO     | sum of deviations: 130320523003.17326
[2025-06-03 19:38:46] 2025-06-03 23:38:34,173 | INFO     | mean x: 1748983546.8115501
[2025-06-03 19:38:46] 2025-06-03 23:38:34,174 | INFO     | mean y: 2081556.9544072947
[2025-06-03 19:38:46] 2025-06-03 23:38:34,174 | INFO     | -- intersect: -20637588068.00956
[2025-06-03 19:38:46] 2025-06-03 23:38:34,174 | INFO     | intersect: -20637588068.00956
[2025-06-03 19:38:46] 2025-06-03 23:38:34,174 | INFO     | chi2: 3.7321927459567568
[2025-06-03 19:38:46] 2025-06-03 23:38:34,175 | INFO     | current chi2=3.7321927459567568 (change=0.040738024872920005 %)
[2025-06-03 19:38:46] 2025-06-03 23:38:34,175 | INFO     | right removable region: 328
[2025-06-03 19:38:46] 2025-06-03 23:38:34,175 | INFO     | sum of square deviations: 11043058978.316
[2025-06-03 19:38:46] 2025-06-03 23:38:34,178 | INFO     | sum of deviations: 61270923771.87537
[2025-06-03 19:38:46] 2025-06-03 23:38:34,178 | INFO     | mean x: 1748983851.8115501
[2025-06-03 19:38:46] 2025-06-03 23:38:34,179 | INFO     | mean y: 2103056.4012158057
[2025-06-03 19:38:46] 2025-06-03 23:38:34,179 | INFO     | -- intersect: -9701898024.549995
[2025-06-03 19:38:46] 2025-06-03 23:38:34,179 | INFO     | intersect: -9701898024.549995
[2025-06-03 19:38:46] 2025-06-03 23:38:34,179 | INFO     | chi2: 1.2797628666036875
[2025-06-03 19:38:46] 2025-06-03 23:38:34,179 | INFO     | current chi2=1.2797628666036875 (change=65.72413046259112 %)
[2025-06-03 19:38:46] 2025-06-03 23:38:34,180 | INFO     | sum of square deviations: 10547135684.972244
[2025-06-03 19:38:46] 2025-06-03 23:38:34,183 | INFO     | sum of deviations: 13067110358.546295
[2025-06-03 19:38:46] 2025-06-03 23:38:34,183 | INFO     | mean x: 1748984004.324074
[2025-06-03 19:38:46] 2025-06-03 23:38:34,183 | INFO     | mean y: 2117864.0709876544
[2025-06-03 19:38:46] 2025-06-03 23:38:34,183 | INFO     | -- intersect: -2164742189.924329
[2025-06-03 19:38:46] 2025-06-03 23:38:34,183 | INFO     | intersect: -2164742189.924329
[2025-06-03 19:38:46] 2025-06-03 23:38:34,184 | INFO     | chi2: 0.20779633575376283
[2025-06-03 19:38:46] 2025-06-03 23:38:34,184 | INFO     | current chi2=0.20779633575376283 (change=83.7629031771155 %)
[2025-06-03 19:38:46] 2025-06-03 23:38:34,185 | INFO     | sum of square deviations: 10066282441.5235
[2025-06-03 19:38:46] 2025-06-03 23:38:34,187 | INFO     | sum of deviations: 9377748827.391846
[2025-06-03 19:38:46] 2025-06-03 23:38:34,188 | INFO     | mean x: 1748984156.8369906
[2025-06-03 19:38:46] 2025-06-03 23:38:34,188 | INFO     | mean y: 2119013.94984326
[2025-06-03 19:38:46] 2025-06-03 23:38:34,188 | INFO     | -- intersect: -1627234644.7800705
[2025-06-03 19:38:46] 2025-06-03 23:38:34,188 | INFO     | intersect: -1627234644.7800705
[2025-06-03 19:38:46] 2025-06-03 23:38:34,188 | INFO     | chi2: 0.17197462904999905
[2025-06-03 19:38:46] 2025-06-03 23:38:34,189 | INFO     | current chi2=0.17197462904999905 (change=17.238853887304465 %)
[2025-06-03 19:38:46] 2025-06-03 23:38:34,189 | INFO     | left removable region: 30
[2025-06-03 19:38:46] 2025-06-03 23:38:34,189 | INFO     | sum of square deviations: 8206230441.063764
[2025-06-03 19:38:46] 2025-06-03 23:38:34,192 | INFO     | sum of deviations: 14976655381.828857
[2025-06-03 19:38:46] 2025-06-03 23:38:34,192 | INFO     | mean x: 1748984431.3926175
[2025-06-03 19:38:46] 2025-06-03 23:38:34,192 | INFO     | mean y: 2117154.1040268457
[2025-06-03 19:38:46] 2025-06-03 23:38:34,192 | INFO     | -- intersect: -3189840138.0136
[2025-06-03 19:38:46] 2025-06-03 23:38:34,192 | INFO     | intersect: -3189840138.0136
[2025-06-03 19:38:46] 2025-06-03 23:38:34,193 | INFO     | chi2: 0.15261749579817396
[2025-06-03 19:38:46] 2025-06-03 23:38:34,193 | INFO     | -- intersect: -3189840138.0136
[2025-06-03 19:38:46] 2025-06-03 23:38:34,193 | INFO     | current memory leak: 1.83 B/s (using 298 data points, chi2=0.15)
[2025-06-03 19:38:46] 2025-06-03 23:38:34,194 | INFO     | ..............................
[2025-06-03 19:38:46] 2025-06-03 23:38:34,194 | INFO     | . Timing measurements:
[2025-06-03 19:38:46] 2025-06-03 23:38:34,194 | INFO     | . get job = 0 s
[2025-06-03 19:38:46] 2025-06-03 23:38:34,194 | INFO     | . initial setup = 2 s
[2025-06-03 19:38:46] 2025-06-03 23:38:34,194 | INFO     | . payload setup = 5 s
[2025-06-03 19:38:46] 2025-06-03 23:38:34,194 | INFO     | . stage-in = 0 s
[2025-06-03 19:38:46] 2025-06-03 23:38:34,194 | INFO     | . payload execution = 20362 s
[2025-06-03 19:38:46] 2025-06-03 23:38:34,195 | INFO     | . stage-out = 2 s
[2025-06-03 19:38:46] 2025-06-03 23:38:34,195 | INFO     | . log creation = 0 s
[2025-06-03 19:38:46] 2025-06-03 23:38:34,195 | INFO     | ..............................
[2025-06-03 19:38:46] 2025-06-03 23:38:34,654 | INFO     | 
[2025-06-03 19:38:46] 2025-06-03 23:38:34,654 | INFO     | job summary report
[2025-06-03 19:38:46] 2025-06-03 23:38:34,654 | INFO     | --------------------------------------------------
[2025-06-03 19:38:46] 2025-06-03 23:38:34,655 | INFO     | PanDA job id: 6677677267
[2025-06-03 19:38:46] 2025-06-03 23:38:34,655 | INFO     | task id: 45006595
[2025-06-03 19:38:46] 2025-06-03 23:38:34,655 | INFO     | errors: (none)
[2025-06-03 19:38:46] 2025-06-03 23:38:34,655 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 19:38:46] 2025-06-03 23:38:34,655 | INFO     | pilot state: finished 
[2025-06-03 19:38:46] 2025-06-03 23:38:34,655 | INFO     | transexitcode: 0
[2025-06-03 19:38:46] 2025-06-03 23:38:34,655 | INFO     | exeerrorcode: 0
[2025-06-03 19:38:46] 2025-06-03 23:38:34,655 | INFO     | exeerrordiag: 
[2025-06-03 19:38:46] 2025-06-03 23:38:34,655 | INFO     | exitcode: 0
[2025-06-03 19:38:46] 2025-06-03 23:38:34,655 | INFO     | exitmsg: OK
[2025-06-03 19:38:46] 2025-06-03 23:38:34,655 | INFO     | cpuconsumptiontime: 43534 s
[2025-06-03 19:38:46] 2025-06-03 23:38:34,656 | INFO     | nevents: 400
[2025-06-03 19:38:46] 2025-06-03 23:38:34,656 | INFO     | neventsw: 0
[2025-06-03 19:38:46] 2025-06-03 23:38:34,656 | INFO     | pid: 1807741
[2025-06-03 19:38:46] 2025-06-03 23:38:34,656 | INFO     | pgrp: 1807741
[2025-06-03 19:38:46] 2025-06-03 23:38:34,656 | INFO     | corecount: 8
[2025-06-03 19:38:46] 2025-06-03 23:38:34,656 | INFO     | event service: False
[2025-06-03 19:38:46] 2025-06-03 23:38:34,656 | INFO     | sizes: {0: 2405012, 1: 2405211, 4: 2405417, 12: 2405445, 20372: 2438453, 20374: 2447394, 20375: 2447578, 20382: 2447748}
[2025-06-03 19:38:46] 2025-06-03 23:38:34,656 | INFO     | --------------------------------------------------
[2025-06-03 19:38:46] 2025-06-03 23:38:34,656 | INFO     | 
[2025-06-03 19:38:46] 2025-06-03 23:38:34,656 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-03 19:38:46] 2025-06-03 23:38:34,675 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 19:38:46] 2025-06-03 23:38:34,676 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 19:38:46] 2025-06-03 23:38:34,676 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 19:38:46] 2025-06-03 23:38:34,676 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 19:38:46] 2025-06-03 23:38:34,676 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 19:38:46] 2025-06-03 23:38:34,676 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 19:38:46] 2025-06-03 23:38:34,676 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 19:38:46] 2025-06-03 23:38:34,676 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 19:38:46] 2025-06-03 23:38:34,676 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 19:38:46] 2025-06-03 23:38:34,677 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 19:38:46] 2025-06-03 23:38:34,677 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 19:38:46] 2025-06-03 23:38:34,677 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 19:38:46] 2025-06-03 23:38:34,677 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 19:38:46] 2025-06-03 23:38:34,677 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 19:38:46] 2025-06-03 23:38:34,677 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 19:38:46] 2025-06-03 23:38:34,677 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 19:38:46] 2025-06-03 23:38:34,677 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 19:38:46] 2025-06-03 23:38:34,677 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 19:38:46] 2025-06-03 23:38:34,678 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 19:38:46] 2025-06-03 23:38:34,678 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 19:38:46] 2025-06-03 23:38:34,678 | INFO     | job 6677677267 has completed (purged errors)
[2025-06-03 19:38:46] 2025-06-03 23:38:34,678 | INFO     | overall cleanup function is called
[2025-06-03 19:38:46] 2025-06-03 23:38:35,686 | INFO     | --- collectZombieJob: --- 10, [1807741]
[2025-06-03 19:38:46] 2025-06-03 23:38:35,686 | INFO     | zombie collector waiting for pid 1807741
[2025-06-03 19:38:46] 2025-06-03 23:38:35,686 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 19:38:46] 2025-06-03 23:38:35,687 | INFO     | collected zombie processes
[2025-06-03 19:38:46] 2025-06-03 23:38:35,687 | INFO     | will attempt to kill all subprocesses of pid=1807741
[2025-06-03 19:38:46] 2025-06-03 23:38:36,022 | INFO     | process IDs to be killed: [1807741] (in reverse order)
[2025-06-03 19:38:46] 2025-06-03 23:38:36,132 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 19:38:46] 2025-06-03 23:38:36,133 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 19:38:46] 2025-06-03 23:38:36,147 | INFO     | did not find any defunct processes belonging to 1807741
[2025-06-03 19:38:46] 2025-06-03 23:38:36,161 | INFO     | did not find any defunct processes belonging to 1807741
[2025-06-03 19:38:46] 2025-06-03 23:38:36,161 | INFO     | ready for new job
[2025-06-03 19:38:46] 2025-06-03 23:38:36,161 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 19:38:46] 2025-06-03 23:38:36,163 | INFO     | **************************************
[2025-06-03 19:38:46] 2025-06-03 23:38:36,163 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 19:38:46] 2025-06-03 23:38:36,163 | INFO     | **************************************
[2025-06-03 19:38:46] 2025-06-03 23:38:36,164 | INFO     | 
[2025-06-03 19:38:46] 2025-06-03 23:38:36,177 | INFO     | architecture information:
[2025-06-03 19:38:46] 2025-06-03 23:38:36,178 | INFO     | executing command: cat /etc/os-release
[2025-06-03 19:38:46] 2025-06-03 23:38:36,188 | INFO     | cat /etc/os-release:
[2025-06-03 19:38:46] NAME="CentOS Linux"
[2025-06-03 19:38:46] VERSION="7 (Core)"
[2025-06-03 19:38:46] ID="centos"
[2025-06-03 19:38:46] ID_LIKE="rhel fedora"
[2025-06-03 19:38:46] VERSION_ID="7"
[2025-06-03 19:38:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 19:38:46] ANSI_COLOR="0;31"
[2025-06-03 19:38:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 19:38:46] HOME_URL="https://www.centos.org/"
[2025-06-03 19:38:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 19:38:46] 
[2025-06-03 19:38:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 19:38:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 19:38:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 19:38:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 19:38:46] 
[2025-06-03 19:38:46] 2025-06-03 23:38:36,188 | INFO     | **************************************
[2025-06-03 19:38:46] 2025-06-03 23:38:36,690 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-03 19:38:46] 2025-06-03 23:38:36,706 | INFO     | sufficient remaining disk space (75960942592 B)
[2025-06-03 19:38:46] 2025-06-03 23:38:36,706 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 19:38:46] 2025-06-03 23:38:36,706 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 19:38:46] 2025-06-03 23:38:36,706 | INFO     | update_server=False
[2025-06-03 19:38:46] 2025-06-03 23:38:36,707 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 19:38:46] 2025-06-03 23:38:36,707 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 19:38:46] 2025-06-03 23:38:36,707 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 19:38:46] 2025-06-03 23:38:36,708 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 19:38:46] 2025-06-03 23:38:36,708 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 19:38:46] 2025-06-03 23:38:36,785 | INFO     | all payload control threads have been joined
[2025-06-03 19:38:46] 2025-06-03 23:38:36,813 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 19:38:46] 2025-06-03 23:38:37,136 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:38:46] 2025-06-03 23:38:37,136 | INFO     | aborting loop
[2025-06-03 19:38:46] 2025-06-03 23:38:37,165 | INFO     | all data control threads have been joined
[2025-06-03 19:38:46] 2025-06-03 23:38:37,415 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 19:38:46] 2025-06-03 23:38:37,500 | INFO     | all job control threads have been joined
[2025-06-03 19:38:46] 2025-06-03 23:38:37,711 | INFO     | [job] retrieve thread has finished
[2025-06-03 19:38:46] 2025-06-03 23:38:37,791 | INFO     | [payload] control thread has finished
[2025-06-03 19:38:46] 2025-06-03 23:38:37,801 | INFO     | [payload] validate_post thread has finished
[2025-06-03 19:38:46] 2025-06-03 23:38:38,141 | INFO     | [job] job monitor thread has finished
[2025-06-03 19:38:46] 2025-06-03 23:38:38,170 | INFO     | [data] control thread has finished
[2025-06-03 19:38:46] 2025-06-03 23:38:38,314 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 19:38:46] 2025-06-03 23:38:38,433 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 19:38:46] 2025-06-03 23:38:38,506 | INFO     | [job] control thread has finished
[2025-06-03 19:38:46] 2025-06-03 23:38:38,585 | INFO     | [payload] failed_post thread has finished
[2025-06-03 19:38:46] 2025-06-03 23:38:38,603 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 19:38:46] 2025-06-03 23:38:38,604 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 19:38:46] 2025-06-03 23:38:38,703 | INFO     | [job] validate thread has finished
[2025-06-03 19:38:46] 2025-06-03 23:38:38,820 | INFO     | [data] copytool_out thread has finished
[2025-06-03 19:38:46] 2025-06-03 23:38:38,873 | INFO     | [data] copytool_in thread has finished
[2025-06-03 19:38:46] 2025-06-03 23:38:39,312 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:38:46] 2025-06-03 23:38:40,317 | INFO     | [job] queue monitor thread has finished
[2025-06-03 19:38:46] 2025-06-03 23:38:41,421 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 19:38:46] 2025-06-03 23:38:41,492 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139728472876864)>', '<ExcThread(monitor, started 139728120682240)>']
[2025-06-03 19:38:46] 2025-06-03 23:38:41,737 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 19:38:46] 2025-06-03 23:38:41,737 | INFO     | [monitor] control thread has ended
[2025-06-03 19:38:46] 2025-06-03 23:38:46,518 | INFO     | all workflow threads have been joined
[2025-06-03 19:38:46] 2025-06-03 23:38:46,518 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 19:38:46] 2025-06-03 23:38:46,519 | INFO     | traces error code: 0
[2025-06-03 19:38:46] 2025-06-03 23:38:46,519 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 19:38:46] 2025-06-03 23:38:46,674 [wrapper] ==== pilot stdout END ====
[2025-06-03 19:38:46] 2025-06-03 23:38:46,676 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 19:38:46] 2025-06-03 23:38:46,678 [wrapper] pilotpid: 1798640
[2025-06-03 19:38:46] 2025-06-03 23:38:46,679 [wrapper] Pilot exit status: 0
[2025-06-03 19:38:46] 2025-06-03 23:38:46,688 [wrapper] pandaids: 6677677267
[2025-06-03 19:38:46] 2025-06-03 23:38:46,756 [wrapper] cleanup supervisor_pilot 3667536 1798641
[2025-06-03 19:38:46] 2025-06-03 23:38:46,760 [wrapper] Test setup, not cleaning
[2025-06-03 19:38:46] 2025-06-03 23:38:46,763 [wrapper] apfmon messages muted
[2025-06-03 19:38:46] 2025-06-03 23:38:46,766 [wrapper] ==== wrapper stdout END ====
[2025-06-03 19:38:46] 2025-06-03 23:38:46,768 [wrapper] ==== wrapper stderr END ====
[2025-06-03 19:38:46]  *** Error codes and diagnostics ***
[2025-06-03 19:38:46]     "exeErrorCode": 0,
[2025-06-03 19:38:46]     "exeErrorDiag": "",
[2025-06-03 19:38:46]     "pilotErrorCode": 0,
[2025-06-03 19:38:46]     "pilotErrorDiag": "",
[2025-06-03 19:38:46]  *** Listing of results directory ***
[2025-06-03 19:38:46] total 400420
[2025-06-03 19:38:46] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 11:35 pilot3.tar.gz
[2025-06-03 19:38:46] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 11:36 queuedata.json
[2025-06-03 19:38:46] -rwx------. 1 boincer umatlas     37140 Jun  3 11:36 runpilot2-wrapper.sh
[2025-06-03 19:38:46] -rw-r--r--. 1 boincer umatlas       100 Jun  3 13:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 19:38:46] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 13:58 run_atlas
[2025-06-03 19:38:46] -rw-r--r--. 1 boincer umatlas       105 Jun  3 13:58 job.xml
[2025-06-03 19:38:46] -rw-r--r--. 2 boincer umatlas 214355478 Jun  3 13:58 EVNT.45006593._001492.pool.root.1
[2025-06-03 19:38:46] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:58 start_atlas.sh
[2025-06-03 19:38:46] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 13:58 shared
[2025-06-03 19:38:46] -rw-r--r--. 2 boincer umatlas    508877 Jun  3 13:58 input.tar.gz
[2025-06-03 19:38:46] -rw-r--r--. 1 boincer umatlas         0 Jun  3 13:58 boinc_lockfile
[2025-06-03 19:38:46] -rw-r--r--. 1 boincer umatlas      2524 Jun  3 13:58 pandaJob.out
[2025-06-03 19:38:46] -rw-------. 1 boincer umatlas    985078 Jun  3 13:58 agis_schedconf.cvmfs.json
[2025-06-03 19:38:46] drwx------. 4 boincer umatlas      4096 Jun  3 13:58 pilot3
[2025-06-03 19:38:46] -rw-------. 1 boincer umatlas 187861581 Jun  3 19:37 HITS.45006595._037149.pool.root.1
[2025-06-03 19:38:46] -rw-r--r--. 1 boincer umatlas       530 Jun  3 19:37 boinc_task_state.xml
[2025-06-03 19:38:46] -rw-------. 1 boincer umatlas        95 Jun  3 19:37 pilot_heartbeat.json
[2025-06-03 19:38:46] -rw-r--r--. 1 boincer umatlas      6673 Jun  3 19:37 init_data.xml
[2025-06-03 19:38:46] -rw-------. 1 boincer umatlas      1049 Jun  3 19:38 memory_monitor_summary.json
[2025-06-03 19:38:46] -rw-------. 1 boincer umatlas   1603667 Jun  3 19:38 agis_ddmendpoints.agis.ALL.json
[2025-06-03 19:38:46] -rw-------. 1 boincer umatlas    449307 Jun  3 19:38 log.45006595._037149.job.log.tgz.1
[2025-06-03 19:38:46] -rw-------. 1 boincer umatlas      7731 Jun  3 19:38 heartbeat.json
[2025-06-03 19:38:46] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 19:38 boinc_mmap_file
[2025-06-03 19:38:46] -rw-r--r--. 1 boincer umatlas        27 Jun  3 19:38 wrapper_checkpoint.txt
[2025-06-03 19:38:46] -rw-------. 1 boincer umatlas      4476 Jun  3 19:38 pilotlog.txt
[2025-06-03 19:38:46] -rw-------. 1 boincer umatlas   1540606 Jun  3 19:38 log.45006595._037149.job.log.1
[2025-06-03 19:38:46] -rw-------. 1 boincer umatlas       357 Jun  3 19:38 output.list
[2025-06-03 19:38:46] -rw-r--r--. 1 boincer umatlas       620 Jun  3 19:38 runtime_log
[2025-06-03 19:38:46] -rw-------. 1 boincer umatlas   2007040 Jun  3 19:38 result.tar.gz
[2025-06-03 19:38:46] -rw-r--r--. 1 boincer umatlas      8645 Jun  3 19:38 runtime_log.err
[2025-06-03 19:38:46] -rw-------. 1 boincer umatlas       657 Jun  3 19:38 JpsLDmJsig7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQqkKDmCUrtOn.diag
[2025-06-03 19:38:46] -rw-r--r--. 1 boincer umatlas     20945 Jun  3 19:38 stderr.txt
[2025-06-03 19:38:46] HITS file was successfully produced:
[2025-06-03 19:38:46] -rw-------. 1 boincer umatlas 187861581 Jun  3 19:37 shared/HITS.pool.root.1
[2025-06-03 19:38:46]  *** Contents of shared directory: ***
[2025-06-03 19:38:46] total 395276
[2025-06-03 19:38:46] -rw-r--r--. 2 boincer umatlas 214355478 Jun  3 13:58 ATLAS.root_0
[2025-06-03 19:38:46] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:58 start_atlas.sh
[2025-06-03 19:38:46] -rw-r--r--. 2 boincer umatlas    508877 Jun  3 13:58 input.tar.gz
[2025-06-03 19:38:46] -rw-------. 1 boincer umatlas 187861581 Jun  3 19:37 HITS.pool.root.1
[2025-06-03 19:38:46] -rw-------. 1 boincer umatlas   2007040 Jun  3 19:38 result.tar.gz
19:38:48 (1795005): run_atlas exited; CPU time 44274.032387
19:38:48 (1795005): called boinc_finish(0)

</stderr_txt>
]]>

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