Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
04:49:34 (1539750): wrapper (7.7.26015): starting
04:49:34 (1539750): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 04:49:34] Arguments: --nthreads 3
[2025-06-04 04:49:34] Threads: 3
[2025-06-04 04:49:34] Checking for CVMFS
[2025-06-04 04:49:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 04:49:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 04:49:35] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 04:49:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 04:49:35] 2.9.2.0 941083 2031 64304 146763 3 56 29492050 36864000 0 130560 0 1605193 99.992 447739 44051 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 04:49:35] CVMFS is ok
[2025-06-04 04:49:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 04:49:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 04:49:35] Further information can be found at the LHC@home message board.
[2025-06-04 04:49:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 04:49:35] Checking for apptainer binary...
[2025-06-04 04:49:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 04:49:35] Running /usr/bin/apptainer --version
[2025-06-04 04:49:35] apptainer version 1.3.6-6.1
[2025-06-04 04:49:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 04:49:35] thA387a
[2025-06-04 04:49:35] apptainer works
[2025-06-04 04:49:35] Set ATHENA_PROC_NUMBER=3
[2025-06-04 04:49:35] Set ATHENA_CORE_NUMBER=3
[2025-06-04 04:49:35] Starting ATLAS job with PandaID=6677733417
[2025-06-04 04:49:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 06:12:41]  *** The last 200 lines of the pilot log: ***
[2025-06-04 06:12:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 06:12:41]  replicas=None
[2025-06-04 06:12:41]  scope=mc23_13p6TeV
[2025-06-04 06:12:41]  status=None
[2025-06-04 06:12:41]  status_code=0
[2025-06-04 06:12:41]  storage_token=
[2025-06-04 06:12:41]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6677733417/log.45006595._037405.job.log.tgz.1
[2025-06-04 06:12:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e4/27/log.45006595._037405.job.log.tgz.1
[2025-06-04 06:12:41]  workdir=None
[2025-06-04 06:12:41] ]
[2025-06-04 06:12:41] 2025-06-04 04:12:08,752 | INFO     | transferring file log.45006595._037405.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6677733417/log.45006595._037405.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 06:12:41] 2025-06-04 04:12:08,752 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6677733417/log.45006595._037405.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0374
[2025-06-04 06:12:41] 2025-06-04 04:12:08,765 | INFO     | adding to output.list: log.45006595._037405.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e4/27/log.45006595._037405.job.log.tg
[2025-06-04 06:12:41] 2025-06-04 04:12:08,765 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 06:12:41] 2025-06-04 04:12:08,765 | INFO     | summary of transferred files:
[2025-06-04 06:12:41] 2025-06-04 04:12:08,765 | INFO     |  -- lfn=log.45006595._037405.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 06:12:41] 2025-06-04 04:12:08,765 | INFO     | stage-out finished correctly
[2025-06-04 06:12:41] 2025-06-04 04:12:10,009 | INFO     | 4946s have passed since pilot start - server update state is 'RUNNING'
[2025-06-04 06:12:41] 2025-06-04 04:12:10,742 | INFO     | monitor loop #382: job 0:6677733417 is in state 'finished'
[2025-06-04 06:12:41] 2025-06-04 04:12:10,743 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 06:12:41] 2025-06-04 04:12:10,907 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 06:12:41] 2025-06-04 04:12:13,247 | INFO     | monitor loop #383: job 0:6677733417 is in state 'finished'
[2025-06-04 06:12:41] 2025-06-04 04:12:13,247 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 06:12:41] 2025-06-04 04:12:13,459 | INFO     | job 6677733417 has state=finished
[2025-06-04 06:12:41] 2025-06-04 04:12:13,460 | INFO     | preparing for final server update for job 6677733417 in state='finished'
[2025-06-04 06:12:41] 2025-06-04 04:12:13,461 | INFO     | this job has now completed (state=finished)
[2025-06-04 06:12:41] 2025-06-04 04:12:13,461 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 06:12:41] 2025-06-04 04:12:13,461 | INFO     | log transfer has been attempted: DONE
[2025-06-04 06:12:41] 2025-06-04 04:12:13,461 | INFO     | job 6677733417 has finished - writing final server update
[2025-06-04 06:12:41] 2025-06-04 04:12:13,462 | INFO     | total number of processed events: 400 (read)
[2025-06-04 06:12:41] 2025-06-04 04:12:13,465 | INFO     | executing command: lscpu
[2025-06-04 06:12:41] 2025-06-04 04:12:13,482 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 06:12:41] 2025-06-04 04:12:15,753 | INFO     | monitor loop #384: job 0:6677733417 is in state 'finished'
[2025-06-04 06:12:41] 2025-06-04 04:12:15,753 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 06:12:41] 2025-06-04 04:12:17,132 | INFO     | PID=1543395 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 06:12:41] 2025-06-04 04:12:18,256 | INFO     | monitor loop #385: job 0:6677733417 is in state 'finished'
[2025-06-04 06:12:41] 2025-06-04 04:12:18,256 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 06:12:41] 2025-06-04 04:12:20,759 | INFO     | monitor loop #386: job 0:6677733417 is in state 'finished'
[2025-06-04 06:12:41] 2025-06-04 04:12:20,759 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 06:12:41] 2025-06-04 04:12:21,878 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 06:12:41] 2025-06-04 04:12:21,878 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677733417/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 06:12:41] 2025-06-04 04:12:21,878 | INFO     | extracted standard info from prmon json
[2025-06-04 06:12:41] 2025-06-04 04:12:21,878 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 06:12:41] 2025-06-04 04:12:21,878 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 06:12:41] 2025-06-04 04:12:21,878 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 06:12:41] 2025-06-04 04:12:21,879 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 06:12:41] 2025-06-04 04:12:21,879 | INFO     | fitting pss+swap vs Time
[2025-06-04 06:12:41] 2025-06-04 04:12:21,879 | INFO     | sum of square deviations: 125630262.5
[2025-06-04 06:12:41] 2025-06-04 04:12:21,879 | INFO     | sum of deviations: -4090040423.0000005
[2025-06-04 06:12:41] 2025-06-04 04:12:21,879 | INFO     | mean x: 1749007942.5
[2025-06-04 06:12:41] 2025-06-04 04:12:21,880 | INFO     | mean y: 2383268.4594594594
[2025-06-04 06:12:41] 2025-06-04 04:12:21,880 | INFO     | -- intersect: 56943386515.77067
[2025-06-04 06:12:41] 2025-06-04 04:12:21,880 | INFO     | intersect: 56943386515.77067
[2025-06-04 06:12:41] 2025-06-04 04:12:21,880 | INFO     | chi2: 0.012917855553763851
[2025-06-04 06:12:41] 2025-06-04 04:12:21,880 | INFO     | -- intersect: 56943386515.77067
[2025-06-04 06:12:41] 2025-06-04 04:12:21,880 | INFO     | current memory leak: -32.56 B/s (using 74 data points, chi2=0.01)
[2025-06-04 06:12:41] 2025-06-04 04:12:21,880 | INFO     | ..............................
[2025-06-04 06:12:41] 2025-06-04 04:12:21,880 | INFO     | . Timing measurements:
[2025-06-04 06:12:41] 2025-06-04 04:12:21,880 | INFO     | . get job = 0 s
[2025-06-04 06:12:41] 2025-06-04 04:12:21,880 | INFO     | . initial setup = 1 s
[2025-06-04 06:12:41] 2025-06-04 04:12:21,880 | INFO     | . payload setup = 6 s
[2025-06-04 06:12:41] 2025-06-04 04:12:21,880 | INFO     | . stage-in = 0 s
[2025-06-04 06:12:41] 2025-06-04 04:12:21,880 | INFO     | . payload execution = 4917 s
[2025-06-04 06:12:41] 2025-06-04 04:12:21,880 | INFO     | . stage-out = 0 s
[2025-06-04 06:12:41] 2025-06-04 04:12:21,880 | INFO     | . log creation = 0 s
[2025-06-04 06:12:41] 2025-06-04 04:12:21,880 | INFO     | ..............................
[2025-06-04 06:12:41] 2025-06-04 04:12:21,912 | INFO     | 
[2025-06-04 06:12:41] 2025-06-04 04:12:21,912 | INFO     | job summary report
[2025-06-04 06:12:41] 2025-06-04 04:12:21,912 | INFO     | --------------------------------------------------
[2025-06-04 06:12:41] 2025-06-04 04:12:21,912 | INFO     | PanDA job id: 6677733417
[2025-06-04 06:12:41] 2025-06-04 04:12:21,912 | INFO     | task id: 45006595
[2025-06-04 06:12:41] 2025-06-04 04:12:21,912 | INFO     | errors: (none)
[2025-06-04 06:12:41] 2025-06-04 04:12:21,912 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 06:12:41] 2025-06-04 04:12:21,912 | INFO     | pilot state: finished 
[2025-06-04 06:12:41] 2025-06-04 04:12:21,912 | INFO     | transexitcode: 0
[2025-06-04 06:12:41] 2025-06-04 04:12:21,912 | INFO     | exeerrorcode: 0
[2025-06-04 06:12:41] 2025-06-04 04:12:21,912 | INFO     | exeerrordiag: 
[2025-06-04 06:12:41] 2025-06-04 04:12:21,912 | INFO     | exitcode: 0
[2025-06-04 06:12:41] 2025-06-04 04:12:21,912 | INFO     | exitmsg: OK
[2025-06-04 06:12:41] 2025-06-04 04:12:21,912 | INFO     | cpuconsumptiontime: 14081 s
[2025-06-04 06:12:41] 2025-06-04 04:12:21,912 | INFO     | nevents: 400
[2025-06-04 06:12:41] 2025-06-04 04:12:21,912 | INFO     | neventsw: 0
[2025-06-04 06:12:41] 2025-06-04 04:12:21,912 | INFO     | pid: 1549884
[2025-06-04 06:12:41] 2025-06-04 04:12:21,912 | INFO     | pgrp: 1549884
[2025-06-04 06:12:41] 2025-06-04 04:12:21,913 | INFO     | corecount: 3
[2025-06-04 06:12:41] 2025-06-04 04:12:21,913 | INFO     | event service: False
[2025-06-04 06:12:41] 2025-06-04 04:12:21,913 | INFO     | sizes: {0: 2404299, 1: 2405158, 4: 2405364, 11: 2405392, 4927: 2440587, 4930: 2440587, 4941: 2440885}
[2025-06-04 06:12:41] 2025-06-04 04:12:21,913 | INFO     | --------------------------------------------------
[2025-06-04 06:12:41] 2025-06-04 04:12:21,913 | INFO     | 
[2025-06-04 06:12:41] 2025-06-04 04:12:21,913 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 06:12:41] 2025-06-04 04:12:21,924 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 04:12:21,925 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 04:12:21,925 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 04:12:21,925 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 04:12:21,925 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 04:12:21,925 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 04:12:21,925 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 04:12:21,925 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 04:12:21,925 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 04:12:21,925 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 04:12:21,925 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 04:12:21,925 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 04:12:21,925 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 04:12:21,925 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 04:12:21,925 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 04:12:21,925 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 04:12:21,925 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 04:12:21,925 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 06:12:41] 2025-06-04 04:12:21,925 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 04:12:21,925 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 04:12:21,925 | INFO     | job 6677733417 has completed (purged errors)
[2025-06-04 06:12:41] 2025-06-04 04:12:21,926 | INFO     | overall cleanup function is called
[2025-06-04 06:12:41] 2025-06-04 04:12:22,932 | INFO     | --- collectZombieJob: --- 10, [1549884]
[2025-06-04 06:12:41] 2025-06-04 04:12:22,932 | INFO     | zombie collector waiting for pid 1549884
[2025-06-04 06:12:41] 2025-06-04 04:12:22,932 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 06:12:41] 2025-06-04 04:12:22,933 | INFO     | collected zombie processes
[2025-06-04 06:12:41] 2025-06-04 04:12:22,933 | INFO     | will attempt to kill all subprocesses of pid=1549884
[2025-06-04 06:12:41] 2025-06-04 04:12:22,974 | INFO     | process IDs to be killed: [1549884] (in reverse order)
[2025-06-04 06:12:41] 2025-06-04 04:12:23,000 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 06:12:41] 2025-06-04 04:12:23,000 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 06:12:41] 2025-06-04 04:12:23,001 | INFO     | did not find any defunct processes belonging to 1549884
[2025-06-04 06:12:41] 2025-06-04 04:12:23,002 | INFO     | did not find any defunct processes belonging to 1549884
[2025-06-04 06:12:41] 2025-06-04 04:12:23,002 | INFO     | ready for new job
[2025-06-04 06:12:41] 2025-06-04 04:12:23,002 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 06:12:41] 2025-06-04 04:12:23,002 | INFO     | **************************************
[2025-06-04 06:12:41] 2025-06-04 04:12:23,002 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 06:12:41] 2025-06-04 04:12:23,003 | INFO     | **************************************
[2025-06-04 06:12:41] 2025-06-04 04:12:23,003 | INFO     | 
[2025-06-04 06:12:41] 2025-06-04 04:12:23,003 | INFO     | architecture information:
[2025-06-04 06:12:41] 2025-06-04 04:12:23,003 | INFO     | executing command: cat /etc/os-release
[2025-06-04 06:12:41] 2025-06-04 04:12:23,013 | INFO     | cat /etc/os-release:
[2025-06-04 06:12:41] NAME="CentOS Linux"
[2025-06-04 06:12:41] VERSION="7 (Core)"
[2025-06-04 06:12:41] ID="centos"
[2025-06-04 06:12:41] ID_LIKE="rhel fedora"
[2025-06-04 06:12:41] VERSION_ID="7"
[2025-06-04 06:12:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 06:12:41] ANSI_COLOR="0;31"
[2025-06-04 06:12:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 06:12:41] HOME_URL="https://www.centos.org/"
[2025-06-04 06:12:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 06:12:41] 
[2025-06-04 06:12:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 06:12:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 06:12:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 06:12:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 06:12:41] 
[2025-06-04 06:12:41] 2025-06-04 04:12:23,013 | INFO     | **************************************
[2025-06-04 06:12:41] 2025-06-04 04:12:23,516 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 06:12:41] 2025-06-04 04:12:23,529 | INFO     | sufficient remaining disk space (827685076992 B)
[2025-06-04 06:12:41] 2025-06-04 04:12:23,529 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 06:12:41] 2025-06-04 04:12:23,529 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 06:12:41] 2025-06-04 04:12:23,530 | INFO     | update_server=False
[2025-06-04 06:12:41] 2025-06-04 04:12:23,530 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 06:12:41] 2025-06-04 04:12:23,530 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 06:12:41] 2025-06-04 04:12:23,530 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 06:12:41] 2025-06-04 04:12:23,530 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 06:12:41] 2025-06-04 04:12:23,530 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 06:12:41] 2025-06-04 04:12:23,530 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:12:41] 2025-06-04 04:12:23,652 | INFO     | all payload control threads have been joined
[2025-06-04 06:12:41] 2025-06-04 04:12:23,761 | INFO     | all data control threads have been joined
[2025-06-04 06:12:41] 2025-06-04 04:12:24,052 | INFO     | all job control threads have been joined
[2025-06-04 06:12:41] 2025-06-04 04:12:24,267 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:12:41] 2025-06-04 04:12:24,267 | INFO     | aborting loop
[2025-06-04 06:12:41] 2025-06-04 04:12:24,318 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 06:12:41] 2025-06-04 04:12:24,535 | INFO     | [job] retrieve thread has finished
[2025-06-04 06:12:41] 2025-06-04 04:12:24,535 | INFO     | [job] queue monitor thread has finished
[2025-06-04 06:12:41] 2025-06-04 04:12:24,658 | INFO     | [payload] control thread has finished
[2025-06-04 06:12:41] 2025-06-04 04:12:24,766 | INFO     | [data] control thread has finished
[2025-06-04 06:12:41] 2025-06-04 04:12:25,041 | INFO     | [payload] validate_post thread has finished
[2025-06-04 06:12:41] 2025-06-04 04:12:25,057 | INFO     | [job] control thread has finished
[2025-06-04 06:12:41] 2025-06-04 04:12:25,225 | INFO     | [payload] failed_post thread has finished
[2025-06-04 06:12:41] 2025-06-04 04:12:25,273 | INFO     | [job] job monitor thread has finished
[2025-06-04 06:12:41] 2025-06-04 04:12:25,502 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 06:12:41] 2025-06-04 04:12:25,503 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 06:12:41] 2025-06-04 04:12:25,719 | INFO     | [data] copytool_in thread has finished
[2025-06-04 06:12:41] 2025-06-04 04:12:25,729 | INFO     | [job] validate thread has finished
[2025-06-04 06:12:41] 2025-06-04 04:12:25,954 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 06:12:41] 2025-06-04 04:12:26,022 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 06:12:41] 2025-06-04 04:12:26,324 | INFO     | [data] copytool_out thread has finished
[2025-06-04 06:12:41] 2025-06-04 04:12:29,961 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 06:12:41] 2025-06-04 04:12:33,926 | INFO     | job.realtimelogging is not enabled
[2025-06-04 06:12:41] 2025-06-04 04:12:34,932 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 06:12:41] 2025-06-04 04:12:36,422 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140703972759360)>', '<ExcThread(monitor, started 140703128614656)>']
[2025-06-04 06:12:41] 2025-06-04 04:12:36,600 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 06:12:41] 2025-06-04 04:12:36,600 | INFO     | [monitor] control thread has ended
[2025-06-04 06:12:41] 2025-06-04 04:12:41,447 | INFO     | all workflow threads have been joined
[2025-06-04 06:12:41] 2025-06-04 04:12:41,448 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 06:12:41] 2025-06-04 04:12:41,448 | INFO     | traces error code: 0
[2025-06-04 06:12:41] 2025-06-04 04:12:41,449 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 06:12:41] 2025-06-04 04:12:41,497 [wrapper] ==== pilot stdout END ====
[2025-06-04 06:12:41] 2025-06-04 04:12:41,500 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 06:12:41] 2025-06-04 04:12:41,503 [wrapper] pilotpid: 1543395
[2025-06-04 06:12:41] 2025-06-04 04:12:41,506 [wrapper] Pilot exit status: 0
[2025-06-04 06:12:41] 2025-06-04 04:12:41,513 [wrapper] pandaids: 6677733417
[2025-06-04 06:12:41] 2025-06-04 04:12:41,530 [wrapper] cleanup supervisor_pilot 1561934 1543396
[2025-06-04 06:12:41] 2025-06-04 04:12:41,533 [wrapper] Test setup, not cleaning
[2025-06-04 06:12:41] 2025-06-04 04:12:41,536 [wrapper] apfmon messages muted
[2025-06-04 06:12:41] 2025-06-04 04:12:41,539 [wrapper] ==== wrapper stdout END ====
[2025-06-04 06:12:41] 2025-06-04 04:12:41,542 [wrapper] ==== wrapper stderr END ====
[2025-06-04 06:12:41]  *** Error codes and diagnostics ***
[2025-06-04 06:12:41]     "exeErrorCode": 0,
[2025-06-04 06:12:41]     "exeErrorDiag": "",
[2025-06-04 06:12:41]     "pilotErrorCode": 0,
[2025-06-04 06:12:41]     "pilotErrorDiag": "",
[2025-06-04 06:12:41]  *** Listing of results directory ***
[2025-06-04 06:12:41] total 384612
[2025-06-04 06:12:41] -rw-r--r-- 1 boinc boinc    495897 Jun  3 17:35 pilot3.tar.gz
[2025-06-04 06:12:41] -rwx------ 1 boinc boinc     37140 Jun  3 17:39 runpilot2-wrapper.sh
[2025-06-04 06:12:41] -rw-r--r-- 1 boinc boinc      5111 Jun  3 17:39 queuedata.json
[2025-06-04 06:12:41] -rw-r--r-- 1 boinc boinc       100 Jun  4 04:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 06:12:41] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 04:49 run_atlas
[2025-06-04 06:12:41] -rw-r--r-- 1 boinc boinc       105 Jun  4 04:49 job.xml
[2025-06-04 06:12:41] -rw-r--r-- 2 boinc boinc 213722668 Jun  4 04:49 EVNT.45006593._000079.pool.root.1
[2025-06-04 06:12:41] -rw-r--r-- 1 boinc boinc      6680 Jun  4 04:49 init_data.xml
[2025-06-04 06:12:41] drwxrwx--x 2 boinc boinc      4096 Jun  4 04:49 shared
[2025-06-04 06:12:41] -rw-r--r-- 2 boinc boinc    508878 Jun  4 04:49 input.tar.gz
[2025-06-04 06:12:41] -rw-r--r-- 2 boinc boinc     15093 Jun  4 04:49 start_atlas.sh
[2025-06-04 06:12:41] -rw-r--r-- 1 boinc boinc         0 Jun  4 04:49 boinc_lockfile
[2025-06-04 06:12:41] -rw-r--r-- 1 boinc boinc      2522 Jun  4 04:49 pandaJob.out
[2025-06-04 06:12:41] -rw------- 1 boinc boinc    986077 Jun  4 04:49 agis_schedconf.cvmfs.json
[2025-06-04 06:12:41] -rw------- 1 boinc boinc   1603667 Jun  4 04:49 agis_ddmendpoints.agis.ALL.json
[2025-06-04 06:12:41] drwx------ 4 boinc boinc      4096 Jun  4 04:49 pilot3
[2025-06-04 06:12:41] -rw------- 1 boinc boinc 174873531 Jun  4 06:11 HITS.45006595._037405.pool.root.1
[2025-06-04 06:12:41] -rw-r--r-- 1 boinc boinc       529 Jun  4 06:11 boinc_task_state.xml
[2025-06-04 06:12:41] -rw------- 1 boinc boinc      1017 Jun  4 06:12 memory_monitor_summary.json
[2025-06-04 06:12:41] -rw------- 1 boinc boinc    223095 Jun  4 06:12 log.45006595._037405.job.log.tgz.1
[2025-06-04 06:12:41] -rw------- 1 boinc boinc        95 Jun  4 06:12 pilot_heartbeat.json
[2025-06-04 06:12:41] -rw------- 1 boinc boinc      7650 Jun  4 06:12 heartbeat.json
[2025-06-04 06:12:41] -rw-r--r-- 1 boinc boinc        27 Jun  4 06:12 wrapper_checkpoint.txt
[2025-06-04 06:12:41] -rw-r--r-- 1 boinc boinc      8192 Jun  4 06:12 boinc_mmap_file
[2025-06-04 06:12:41] -rw------- 1 boinc boinc      4552 Jun  4 06:12 pilotlog.txt
[2025-06-04 06:12:41] -rw------- 1 boinc boinc    482194 Jun  4 06:12 log.45006595._037405.job.log.1
[2025-06-04 06:12:41] -rw------- 1 boinc boinc       357 Jun  4 06:12 output.list
[2025-06-04 06:12:41] -rw-r--r-- 1 boinc boinc       620 Jun  4 06:12 runtime_log
[2025-06-04 06:12:41] -rw------- 1 boinc boinc    727040 Jun  4 06:12 result.tar.gz
[2025-06-04 06:12:41] -rw-r--r-- 1 boinc boinc      8738 Jun  4 06:12 runtime_log.err
[2025-06-04 06:12:41] -rw------- 1 boinc boinc       659 Jun  4 06:12 q8xLDmRuig7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmiqkKDmvx28tm.diag
[2025-06-04 06:12:41] -rw-r--r-- 1 boinc boinc     21927 Jun  4 06:12 stderr.txt
[2025-06-04 06:12:41] HITS file was successfully produced:
[2025-06-04 06:12:41] -rw------- 1 boinc boinc 174873531 Jun  4 06:11 shared/HITS.pool.root.1
[2025-06-04 06:12:41]  *** Contents of shared directory: ***
[2025-06-04 06:12:41] total 380724
[2025-06-04 06:12:41] -rw-r--r-- 2 boinc boinc 213722668 Jun  4 04:49 ATLAS.root_0
[2025-06-04 06:12:41] -rw-r--r-- 2 boinc boinc    508878 Jun  4 04:49 input.tar.gz
[2025-06-04 06:12:41] -rw-r--r-- 2 boinc boinc     15093 Jun  4 04:49 start_atlas.sh
[2025-06-04 06:12:41] -rw------- 1 boinc boinc 174873531 Jun  4 06:11 HITS.pool.root.1
[2025-06-04 06:12:41] -rw------- 1 boinc boinc    727040 Jun  4 06:12 result.tar.gz
06:12:43 (1539750): run_atlas exited; CPU time 14106.528936
06:12:43 (1539750): called boinc_finish(0)

</stderr_txt>
]]>

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