Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:28:41 (3203467): wrapper (7.7.26015): starting
13:28:41 (3203467): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 13:28:41] Arguments: --nthreads 4
[2025-06-05 13:28:41] Threads: 4
[2025-06-05 13:28:41] Checking for CVMFS
[2025-06-05 13:28:41] No cvmfs_config command found, will try listing directly
[2025-06-05 13:28:41] CVMFS is ok
[2025-06-05 13:28:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 13:28:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 13:28:41] Further information can be found at the LHC@home message board.
[2025-06-05 13:28:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 13:28:41] Checking for apptainer binary...
[2025-06-05 13:28:41] which: no apptainer in ((null))
[2025-06-05 13:28:41] apptainer is not installed, using version from CVMFS
[2025-06-05 13:28:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 13:28:41] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2025-06-05 13:28:41] apptainer works
[2025-06-05 13:28:41] Set ATHENA_PROC_NUMBER=4
[2025-06-05 13:28:41] Set ATHENA_CORE_NUMBER=4
[2025-06-05 13:28:41] Starting ATLAS job with PandaID=6677677104
[2025-06-05 13:28:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 15:59:59]  *** The last 200 lines of the pilot log: ***
[2025-06-05 15:59:59] 2025-06-05 13:59:44,907 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 15:59:59] 2025-06-05 13:59:44,908 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6677677104/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 15:59:59] 2025-06-05 13:59:44,909 | INFO     | extracted standard info from prmon json
[2025-06-05 15:59:59] 2025-06-05 13:59:44,910 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 15:59:59] 2025-06-05 13:59:44,910 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 15:59:59] 2025-06-05 13:59:44,910 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 15:59:59] 2025-06-05 13:59:44,910 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 15:59:59] 2025-06-05 13:59:44,914 | INFO     | fitting pss+swap vs Time
[2025-06-05 15:59:59] 2025-06-05 13:59:44,915 | INFO     | sum of square deviations: 1005179777.0
[2025-06-05 15:59:59] 2025-06-05 13:59:44,916 | INFO     | sum of deviations: 19153076216.0
[2025-06-05 15:59:59] 2025-06-05 13:59:44,916 | INFO     | mean x: 1749127443.5
[2025-06-05 15:59:59] 2025-06-05 13:59:44,916 | INFO     | mean y: 2300807.0
[2025-06-05 15:59:59] 2025-06-05 13:59:44,916 | INFO     | -- intersect: -33326236041.242558
[2025-06-05 15:59:59] 2025-06-05 13:59:44,916 | INFO     | intersect: -33326236041.242558
[2025-06-05 15:59:59] 2025-06-05 13:59:44,916 | INFO     | chi2: 1.7622524392991077
[2025-06-05 15:59:59] 2025-06-05 13:59:44,917 | INFO     | sum of square deviations: 906703512.0
[2025-06-05 15:59:59] 2025-06-05 13:59:44,918 | INFO     | sum of deviations: 18558627190.000008
[2025-06-05 15:59:59] 2025-06-05 13:59:44,918 | INFO     | mean x: 1749127291.0
[2025-06-05 15:59:59] 2025-06-05 13:59:44,918 | INFO     | mean y: 2299886.125874126
[2025-06-05 15:59:59] 2025-06-05 13:59:44,918 | INFO     | -- intersect: -35799261342.99138
[2025-06-05 15:59:59] 2025-06-05 13:59:44,918 | INFO     | intersect: -35799261342.99138
[2025-06-05 15:59:59] 2025-06-05 13:59:44,918 | INFO     | chi2: 1.7645167593785345
[2025-06-05 15:59:59] 2025-06-05 13:59:44,918 | INFO     | current chi2=1.7645167593785345 (change=-0.12849010896119753 %)
[2025-06-05 15:59:59] 2025-06-05 13:59:44,919 | INFO     | right removable region: 142
[2025-06-05 15:59:59] 2025-06-05 13:59:44,919 | INFO     | sum of square deviations: 906703512.0
[2025-06-05 15:59:59] 2025-06-05 13:59:44,920 | INFO     | sum of deviations: -5297163018.000002
[2025-06-05 15:59:59] 2025-06-05 13:59:44,920 | INFO     | mean x: 1749127596.0
[2025-06-05 15:59:59] 2025-06-05 13:59:44,920 | INFO     | mean y: 2338184.944055944
[2025-06-05 15:59:59] 2025-06-05 13:59:44,920 | INFO     | -- intersect: 10221129545.812246
[2025-06-05 15:59:59] 2025-06-05 13:59:44,920 | INFO     | intersect: 10221129545.812246
[2025-06-05 15:59:59] 2025-06-05 13:59:44,920 | INFO     | chi2: 0.03225684130357295
[2025-06-05 15:59:59] 2025-06-05 13:59:44,920 | INFO     | current chi2=0.03225684130357295 (change=98.16956750439215 %)
[2025-06-05 15:59:59] 2025-06-05 13:59:44,921 | INFO     | sum of square deviations: 814878534.5
[2025-06-05 15:59:59] 2025-06-05 13:59:44,922 | INFO     | sum of deviations: -6634883806.999999
[2025-06-05 15:59:59] 2025-06-05 13:59:44,922 | INFO     | mean x: 1749127748.5
[2025-06-05 15:59:59] 2025-06-05 13:59:44,922 | INFO     | mean y: 2340329.6231884058
[2025-06-05 15:59:59] 2025-06-05 13:59:44,922 | INFO     | -- intersect: 14244044931.669025
[2025-06-05 15:59:59] 2025-06-05 13:59:44,922 | INFO     | intersect: 14244044931.669025
[2025-06-05 15:59:59] 2025-06-05 13:59:44,922 | INFO     | chi2: 0.011559867330068745
[2025-06-05 15:59:59] 2025-06-05 13:59:44,922 | INFO     | current chi2=0.011559867330068745 (change=64.16305235445262 %)
[2025-06-05 15:59:59] 2025-06-05 13:59:44,923 | INFO     | sum of square deviations: 729472282.0
[2025-06-05 15:59:59] 2025-06-05 13:59:44,923 | INFO     | sum of deviations: -5416027008.0
[2025-06-05 15:59:59] 2025-06-05 13:59:44,924 | INFO     | mean x: 1749127901.0
[2025-06-05 15:59:59] 2025-06-05 13:59:44,924 | INFO     | mean y: 2338143.962406015
[2025-06-05 15:59:59] 2025-06-05 13:59:44,924 | INFO     | -- intersect: 12988882233.464014
[2025-06-05 15:59:59] 2025-06-05 13:59:44,924 | INFO     | intersect: 12988882233.464014
[2025-06-05 15:59:59] 2025-06-05 13:59:44,924 | INFO     | chi2: 0.01079154203173495
[2025-06-05 15:59:59] 2025-06-05 13:59:44,924 | INFO     | current chi2=0.01079154203173495 (change=6.646488894688953 %)
[2025-06-05 15:59:59] 2025-06-05 13:59:44,924 | INFO     | left removable region: 30
[2025-06-05 15:59:59] 2025-06-05 13:59:44,925 | INFO     | sum of square deviations: 435610028.0
[2025-06-05 15:59:59] 2025-06-05 13:59:44,925 | INFO     | sum of deviations: -897605941.5
[2025-06-05 15:59:59] 2025-06-05 13:59:44,925 | INFO     | mean x: 1749128175.5
[2025-06-05 15:59:59] 2025-06-05 13:59:44,925 | INFO     | mean y: 2328901.0803571427
[2025-06-05 15:59:59] 2025-06-05 13:59:44,925 | INFO     | -- intersect: 3606533905.226531
[2025-06-05 15:59:59] 2025-06-05 13:59:44,926 | INFO     | intersect: 3606533905.226531
[2025-06-05 15:59:59] 2025-06-05 13:59:44,926 | INFO     | chi2: 0.001023023393667046
[2025-06-05 15:59:59] 2025-06-05 13:59:44,926 | INFO     | -- intersect: 3606533905.226531
[2025-06-05 15:59:59] 2025-06-05 13:59:44,926 | INFO     | current memory leak: -2.06 B/s (using 112 data points, chi2=0.00)
[2025-06-05 15:59:59] 2025-06-05 13:59:44,927 | INFO     | ..............................
[2025-06-05 15:59:59] 2025-06-05 13:59:44,927 | INFO     | . Timing measurements:
[2025-06-05 15:59:59] 2025-06-05 13:59:44,927 | INFO     | . get job = 0 s
[2025-06-05 15:59:59] 2025-06-05 13:59:44,927 | INFO     | . initial setup = 1 s
[2025-06-05 15:59:59] 2025-06-05 13:59:44,927 | INFO     | . payload setup = 7 s
[2025-06-05 15:59:59] 2025-06-05 13:59:44,927 | INFO     | . stage-in = 0 s
[2025-06-05 15:59:59] 2025-06-05 13:59:44,927 | INFO     | . payload execution = 9017 s
[2025-06-05 15:59:59] 2025-06-05 13:59:44,927 | INFO     | . stage-out = 0 s
[2025-06-05 15:59:59] 2025-06-05 13:59:44,927 | INFO     | . log creation = 0 s
[2025-06-05 15:59:59] 2025-06-05 13:59:44,927 | INFO     | ..............................
[2025-06-05 15:59:59] 2025-06-05 13:59:45,056 | INFO     | 
[2025-06-05 15:59:59] 2025-06-05 13:59:45,057 | INFO     | job summary report
[2025-06-05 15:59:59] 2025-06-05 13:59:45,057 | INFO     | --------------------------------------------------
[2025-06-05 15:59:59] 2025-06-05 13:59:45,057 | INFO     | PanDA job id: 6677677104
[2025-06-05 15:59:59] 2025-06-05 13:59:45,057 | INFO     | task id: 45006595
[2025-06-05 15:59:59] 2025-06-05 13:59:45,057 | INFO     | errors: (none)
[2025-06-05 15:59:59] 2025-06-05 13:59:45,057 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 15:59:59] 2025-06-05 13:59:45,057 | INFO     | pilot state: finished 
[2025-06-05 15:59:59] 2025-06-05 13:59:45,057 | INFO     | transexitcode: 0
[2025-06-05 15:59:59] 2025-06-05 13:59:45,057 | INFO     | exeerrorcode: 0
[2025-06-05 15:59:59] 2025-06-05 13:59:45,057 | INFO     | exeerrordiag: 
[2025-06-05 15:59:59] 2025-06-05 13:59:45,057 | INFO     | exitcode: 0
[2025-06-05 15:59:59] 2025-06-05 13:59:45,057 | INFO     | exitmsg: OK
[2025-06-05 15:59:59] 2025-06-05 13:59:45,058 | INFO     | cpuconsumptiontime: 34380 s
[2025-06-05 15:59:59] 2025-06-05 13:59:45,058 | INFO     | nevents: 400
[2025-06-05 15:59:59] 2025-06-05 13:59:45,058 | INFO     | neventsw: 0
[2025-06-05 15:59:59] 2025-06-05 13:59:45,058 | INFO     | pid: 3214148
[2025-06-05 15:59:59] 2025-06-05 13:59:45,058 | INFO     | pgrp: 3214148
[2025-06-05 15:59:59] 2025-06-05 13:59:45,058 | INFO     | corecount: 4
[2025-06-05 15:59:59] 2025-06-05 13:59:45,058 | INFO     | event service: False
[2025-06-05 15:59:59] 2025-06-05 13:59:45,058 | INFO     | sizes: {0: 2397182, 1: 2397381, 6: 2397587, 12: 2397615, 9028: 2425625, 9029: 2425624, 9030: 2434827, 9037: 2434941}
[2025-06-05 15:59:59] 2025-06-05 13:59:45,058 | INFO     | --------------------------------------------------
[2025-06-05 15:59:59] 2025-06-05 13:59:45,058 | INFO     | 
[2025-06-05 15:59:59] 2025-06-05 13:59:45,058 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2025-06-05 15:59:59] 2025-06-05 13:59:45,081 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 15:59:59] 2025-06-05 13:59:45,081 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 15:59:59] 2025-06-05 13:59:45,081 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 15:59:59] 2025-06-05 13:59:45,081 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 15:59:59] 2025-06-05 13:59:45,081 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 15:59:59] 2025-06-05 13:59:45,081 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 15:59:59] 2025-06-05 13:59:45,082 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 15:59:59] 2025-06-05 13:59:45,082 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 15:59:59] 2025-06-05 13:59:45,082 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 15:59:59] 2025-06-05 13:59:45,082 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 15:59:59] 2025-06-05 13:59:45,082 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 15:59:59] 2025-06-05 13:59:45,082 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 15:59:59] 2025-06-05 13:59:45,082 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 15:59:59] 2025-06-05 13:59:45,082 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 15:59:59] 2025-06-05 13:59:45,082 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 15:59:59] 2025-06-05 13:59:45,082 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 15:59:59] 2025-06-05 13:59:45,082 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 15:59:59] 2025-06-05 13:59:45,082 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 15:59:59] 2025-06-05 13:59:45,082 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 15:59:59] 2025-06-05 13:59:45,082 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 15:59:59] 2025-06-05 13:59:45,083 | INFO     | job 6677677104 has completed (purged errors)
[2025-06-05 15:59:59] 2025-06-05 13:59:45,083 | INFO     | overall cleanup function is called
[2025-06-05 15:59:59] 2025-06-05 13:59:46,090 | INFO     | --- collectZombieJob: --- 10, [3214148]
[2025-06-05 15:59:59] 2025-06-05 13:59:46,090 | INFO     | zombie collector waiting for pid 3214148
[2025-06-05 15:59:59] 2025-06-05 13:59:46,090 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 15:59:59] 2025-06-05 13:59:46,090 | INFO     | collected zombie processes
[2025-06-05 15:59:59] 2025-06-05 13:59:46,090 | INFO     | will attempt to kill all subprocesses of pid=3214148
[2025-06-05 15:59:59] 2025-06-05 13:59:46,464 | INFO     | process IDs to be killed: [3214148] (in reverse order)
[2025-06-05 15:59:59] 2025-06-05 13:59:46,580 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 15:59:59] 2025-06-05 13:59:46,581 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 15:59:59] 2025-06-05 13:59:46,592 | INFO     | did not find any defunct processes belonging to 3214148
[2025-06-05 15:59:59] 2025-06-05 13:59:46,603 | INFO     | did not find any defunct processes belonging to 3214148
[2025-06-05 15:59:59] 2025-06-05 13:59:46,604 | INFO     | ready for new job
[2025-06-05 15:59:59] 2025-06-05 13:59:46,604 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 15:59:59] 2025-06-05 13:59:46,606 | INFO     | **************************************
[2025-06-05 15:59:59] 2025-06-05 13:59:46,606 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 15:59:59] 2025-06-05 13:59:46,606 | INFO     | **************************************
[2025-06-05 15:59:59] 2025-06-05 13:59:46,606 | INFO     | 
[2025-06-05 15:59:59] 2025-06-05 13:59:46,610 | INFO     | architecture information:
[2025-06-05 15:59:59] 2025-06-05 13:59:46,610 | INFO     | executing command: cat /etc/os-release
[2025-06-05 15:59:59] 2025-06-05 13:59:46,627 | INFO     | cat /etc/os-release:
[2025-06-05 15:59:59] NAME="CentOS Linux"
[2025-06-05 15:59:59] VERSION="7 (Core)"
[2025-06-05 15:59:59] ID="centos"
[2025-06-05 15:59:59] ID_LIKE="rhel fedora"
[2025-06-05 15:59:59] VERSION_ID="7"
[2025-06-05 15:59:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 15:59:59] ANSI_COLOR="0;31"
[2025-06-05 15:59:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 15:59:59] HOME_URL="https://www.centos.org/"
[2025-06-05 15:59:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 15:59:59] 
[2025-06-05 15:59:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 15:59:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 15:59:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 15:59:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 15:59:59] 
[2025-06-05 15:59:59] 2025-06-05 13:59:46,627 | INFO     | **************************************
[2025-06-05 15:59:59] 2025-06-05 13:59:47,130 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2025-06-05 15:59:59] 2025-06-05 13:59:47,150 | INFO     | sufficient remaining disk space (664580128768 B)
[2025-06-05 15:59:59] 2025-06-05 13:59:47,150 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 15:59:59] 2025-06-05 13:59:47,150 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 15:59:59] 2025-06-05 13:59:47,150 | INFO     | update_server=False
[2025-06-05 15:59:59] 2025-06-05 13:59:47,150 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 15:59:59] 2025-06-05 13:59:47,279 | INFO     | all payload control threads have been joined
[2025-06-05 15:59:59] 2025-06-05 13:59:47,560 | INFO     | all data control threads have been joined
[2025-06-05 15:59:59] 2025-06-05 13:59:47,765 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 15:59:59] 2025-06-05 13:59:47,765 | INFO     | aborting loop
[2025-06-05 15:59:59] 2025-06-05 13:59:47,775 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 15:59:59] 2025-06-05 13:59:47,775 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 15:59:59] 2025-06-05 13:59:47,775 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 15:59:59] 2025-06-05 13:59:48,068 | INFO     | all job control threads have been joined
[2025-06-05 15:59:59] 2025-06-05 13:59:48,156 | INFO     | [job] retrieve thread has finished
[2025-06-05 15:59:59] 2025-06-05 13:59:48,285 | INFO     | [payload] control thread has finished
[2025-06-05 15:59:59] 2025-06-05 13:59:48,388 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 15:59:59] 2025-06-05 13:59:48,511 | INFO     | [data] copytool_in thread has finished
[2025-06-05 15:59:59] 2025-06-05 13:59:48,565 | INFO     | [data] control thread has finished
[2025-06-05 15:59:59] 2025-06-05 13:59:48,674 | INFO     | [payload] validate_post thread has finished
[2025-06-05 15:59:59] 2025-06-05 13:59:48,770 | INFO     | [job] job monitor thread has finished
[2025-06-05 15:59:59] 2025-06-05 13:59:48,797 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 15:59:59] 2025-06-05 13:59:49,074 | INFO     | [job] control thread has finished
[2025-06-05 15:59:59] 2025-06-05 13:59:49,135 | INFO     | [job] validate thread has finished
[2025-06-05 15:59:59] 2025-06-05 13:59:49,339 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 15:59:59] 2025-06-05 13:59:49,348 | INFO     | [payload] failed_post thread has finished
[2025-06-05 15:59:59] 2025-06-05 13:59:49,371 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 15:59:59] 2025-06-05 13:59:49,387 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 15:59:59] 2025-06-05 13:59:49,594 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 15:59:59] 2025-06-05 13:59:50,048 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 15:59:59] 2025-06-05 13:59:50,393 | INFO     | [data] copytool_out thread has finished
[2025-06-05 15:59:59] 2025-06-05 13:59:51,053 | INFO     | [job] queue monitor thread has finished
[2025-06-05 15:59:59] 2025-06-05 13:59:52,803 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 15:59:59] 2025-06-05 13:59:54,396 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23330281137984)>', '<ExcThread(monitor, started 23330027407104)>']
[2025-06-05 15:59:59] 2025-06-05 13:59:54,805 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 15:59:59] 2025-06-05 13:59:54,805 | INFO     | [monitor] control thread has ended
[2025-06-05 15:59:59] 2025-06-05 13:59:59,421 | INFO     | all workflow threads have been joined
[2025-06-05 15:59:59] 2025-06-05 13:59:59,421 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 15:59:59] 2025-06-05 13:59:59,421 | INFO     | traces error code: 0
[2025-06-05 15:59:59] 2025-06-05 13:59:59,421 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 15:59:59] 2025-06-05 13:59:59,579 [wrapper] ==== pilot stdout END ====
[2025-06-05 15:59:59] 2025-06-05 13:59:59,582 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 15:59:59] 2025-06-05 13:59:59,586 [wrapper] pilotpid: 3207141
[2025-06-05 15:59:59] 2025-06-05 13:59:59,589 [wrapper] Pilot exit status: 0
[2025-06-05 15:59:59] 2025-06-05 13:59:59,601 [wrapper] pandaids: 6677677104
[2025-06-05 15:59:59] 2025-06-05 13:59:59,671 [wrapper] cleanup supervisor_pilot 3472571 3207142
[2025-06-05 15:59:59] 2025-06-05 13:59:59,674 [wrapper] Test setup, not cleaning
[2025-06-05 15:59:59] 2025-06-05 13:59:59,678 [wrapper] apfmon messages muted
[2025-06-05 15:59:59] 2025-06-05 13:59:59,681 [wrapper] ==== wrapper stdout END ====
[2025-06-05 15:59:59] 2025-06-05 13:59:59,684 [wrapper] ==== wrapper stderr END ====
[2025-06-05 15:59:59]  *** Error codes and diagnostics ***
[2025-06-05 15:59:59]     "exeErrorCode": 0,
[2025-06-05 15:59:59]     "exeErrorDiag": "",
[2025-06-05 15:59:59]     "pilotErrorCode": 0,
[2025-06-05 15:59:59]     "pilotErrorDiag": "",
[2025-06-05 15:59:59]  *** Listing of results directory ***
[2025-06-05 15:59:59] total 388240
[2025-06-05 15:59:59] -rw-r--r-- 1 boinc boinc    495897 Jun  3 17:19 pilot3.tar.gz
[2025-06-05 15:59:59] -rw-r--r-- 1 boinc boinc      5111 Jun  3 17:31 queuedata.json
[2025-06-05 15:59:59] -rwx------ 1 boinc boinc     37140 Jun  3 17:31 runpilot2-wrapper.sh
[2025-06-05 15:59:59] -rw-r--r-- 1 boinc boinc       100 Jun  5 13:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 15:59:59] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 13:28 run_atlas
[2025-06-05 15:59:59] -rw-r--r-- 1 boinc boinc       105 Jun  5 13:28 job.xml
[2025-06-05 15:59:59] -rw-r--r-- 2 boinc boinc 218446204 Jun  5 13:28 EVNT.45006593._001486.pool.root.1
[2025-06-05 15:59:59] -rw-r--r-- 1 boinc boinc      6635 Jun  5 13:28 init_data.xml
[2025-06-05 15:59:59] -rw-r--r-- 2 boinc boinc     15093 Jun  5 13:28 start_atlas.sh
[2025-06-05 15:59:59] drwxrwx--x 2 boinc boinc      4096 Jun  5 13:28 shared
[2025-06-05 15:59:59] -rw-r--r-- 2 boinc boinc    508878 Jun  5 13:28 input.tar.gz
[2025-06-05 15:59:59] -rw-r--r-- 1 boinc boinc         0 Jun  5 13:28 boinc_lockfile
[2025-06-05 15:59:59] -rw-r--r-- 1 boinc boinc      2525 Jun  5 13:28 pandaJob.out
[2025-06-05 15:59:59] -rw------- 1 boinc boinc    982836 Jun  5 13:28 agis_schedconf.cvmfs.json
[2025-06-05 15:59:59] -rw------- 1 boinc boinc   1598969 Jun  5 13:28 agis_ddmendpoints.agis.ALL.json
[2025-06-05 15:59:59] drwx------ 4 boinc boinc      4096 Jun  5 13:28 pilot3
[2025-06-05 15:59:59] -rw------- 1 boinc boinc 173003197 Jun  5 15:59 HITS.45006595._036986.pool.root.1
[2025-06-05 15:59:59] -rw------- 1 boinc boinc        95 Jun  5 15:59 pilot_heartbeat.json
[2025-06-05 15:59:59] -rw-r--r-- 1 boinc boinc       528 Jun  5 15:59 boinc_task_state.xml
[2025-06-05 15:59:59] -rw------- 1 boinc boinc      1049 Jun  5 15:59 memory_monitor_summary.json
[2025-06-05 15:59:59] -rw------- 1 boinc boinc    281764 Jun  5 15:59 log.45006595._036986.job.log.tgz.1
[2025-06-05 15:59:59] -rw------- 1 boinc boinc      7722 Jun  5 15:59 heartbeat.json
[2025-06-05 15:59:59] -rw-r--r-- 1 boinc boinc      8192 Jun  5 15:59 boinc_mmap_file
[2025-06-05 15:59:59] -rw-r--r-- 1 boinc boinc        26 Jun  5 15:59 wrapper_checkpoint.txt
[2025-06-05 15:59:59] -rw------- 1 boinc boinc      4363 Jun  5 15:59 pilotlog.txt
[2025-06-05 15:59:59] -rw------- 1 boinc boinc    856890 Jun  5 15:59 log.45006595._036986.job.log.1
[2025-06-05 15:59:59] -rw------- 1 boinc boinc       357 Jun  5 15:59 output.list
[2025-06-05 15:59:59] -rw-r--r-- 1 boinc boinc       620 Jun  5 15:59 runtime_log
[2025-06-05 15:59:59] -rw------- 1 boinc boinc   1157120 Jun  5 15:59 result.tar.gz
[2025-06-05 15:59:59] -rw-r--r-- 1 boinc boinc      9025 Jun  5 15:59 runtime_log.err
[2025-06-05 15:59:59] -rw------- 1 boinc boinc       662 Jun  5 15:59 pakMDmGnig7n9Rq4apOajLDm4fhM0noT9bVof3QYDms3YKDm2WyYxn.diag
[2025-06-05 15:59:59] -rw-r--r-- 1 boinc boinc     20594 Jun  5 15:59 stderr.txt
[2025-06-05 15:59:59] HITS file was successfully produced:
[2025-06-05 15:59:59] -rw------- 1 boinc boinc 173003197 Jun  5 15:59 shared/HITS.pool.root.1
[2025-06-05 15:59:59]  *** Contents of shared directory: ***
[2025-06-05 15:59:59] total 383936
[2025-06-05 15:59:59] -rw-r--r-- 2 boinc boinc 218446204 Jun  5 13:28 ATLAS.root_0
[2025-06-05 15:59:59] -rw-r--r-- 2 boinc boinc     15093 Jun  5 13:28 start_atlas.sh
[2025-06-05 15:59:59] -rw-r--r-- 2 boinc boinc    508878 Jun  5 13:28 input.tar.gz
[2025-06-05 15:59:59] -rw------- 1 boinc boinc 173003197 Jun  5 15:59 HITS.pool.root.1
[2025-06-05 15:59:59] -rw------- 1 boinc boinc   1157120 Jun  5 15:59 result.tar.gz
16:00:00 (3203467): run_atlas exited; CPU time 34727.979441
16:00:00 (3203467): called boinc_finish(0)

</stderr_txt>
]]>

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