Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:55:45 (2690617): wrapper (7.7.26015): starting
11:55:45 (2690617): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 11:55:45] Arguments: --nthreads 4
[2025-06-05 11:55:45] Threads: 4
[2025-06-05 11:55:45] Checking for CVMFS
[2025-06-05 11:55:45] No cvmfs_config command found, will try listing directly
[2025-06-05 11:55:45] CVMFS is ok
[2025-06-05 11:55:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 11:55:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 11:55:45] Further information can be found at the LHC@home message board.
[2025-06-05 11:55:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 11:55:45] Checking for apptainer binary...
[2025-06-05 11:55:45] which: no apptainer in ((null))
[2025-06-05 11:55:45] apptainer is not installed, using version from CVMFS
[2025-06-05 11:55:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 11:55:46] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot84/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-06-05 11:55:46] apptainer works
[2025-06-05 11:55:46] Set ATHENA_PROC_NUMBER=4
[2025-06-05 11:55:46] Set ATHENA_CORE_NUMBER=4
[2025-06-05 11:55:46] Starting ATLAS job with PandaID=6677676755
[2025-06-05 11:55:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot84/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 14:17:57]  *** The last 200 lines of the pilot log: ***
[2025-06-05 14:17:57] 2025-06-05 12:17:03,326 | INFO     | intersect: -52141486805.90042
[2025-06-05 14:17:57] 2025-06-05 12:17:03,326 | INFO     | chi2: 1.5991722117379275
[2025-06-05 14:17:57] 2025-06-05 12:17:03,326 | INFO     | current chi2=1.5991722117379275 (change=-0.10412465404769401 %)
[2025-06-05 14:17:57] 2025-06-05 12:17:03,326 | INFO     | right removable region: 132
[2025-06-05 14:17:57] 2025-06-05 12:17:03,326 | INFO     | sum of square deviations: 729472282.0
[2025-06-05 14:17:57] 2025-06-05 12:17:03,327 | INFO     | sum of deviations: 1570221862.0
[2025-06-05 14:17:57] 2025-06-05 12:17:03,327 | INFO     | mean x: 1749121723.0
[2025-06-05 14:17:57] 2025-06-05 12:17:03,327 | INFO     | mean y: 2320939.045112782
[2025-06-05 14:17:57] 2025-06-05 12:17:03,327 | INFO     | -- intersect: -3762742157.284719
[2025-06-05 14:17:57] 2025-06-05 12:17:03,327 | INFO     | intersect: -3762742157.284719
[2025-06-05 14:17:57] 2025-06-05 12:17:03,328 | INFO     | chi2: 0.003991633450624215
[2025-06-05 14:17:57] 2025-06-05 12:17:03,328 | INFO     | current chi2=0.003991633450624215 (change=99.75013386952222 %)
[2025-06-05 14:17:57] 2025-06-05 12:17:03,328 | INFO     | sum of square deviations: 650252192.0
[2025-06-05 14:17:57] 2025-06-05 12:17:03,329 | INFO     | sum of deviations: 1041132506.0
[2025-06-05 14:17:57] 2025-06-05 12:17:03,329 | INFO     | mean x: 1749121875.5
[2025-06-05 14:17:57] 2025-06-05 12:17:03,329 | INFO     | mean y: 2321920.46875
[2025-06-05 14:17:57] 2025-06-05 12:17:03,329 | INFO     | -- intersect: -2798234023.7374864
[2025-06-05 14:17:57] 2025-06-05 12:17:03,329 | INFO     | intersect: -2798234023.7374864
[2025-06-05 14:17:57] 2025-06-05 12:17:03,329 | INFO     | chi2: 0.0008036818817213128
[2025-06-05 14:17:57] 2025-06-05 12:17:03,329 | INFO     | current chi2=0.0008036818817213128 (change=79.86583959517544 %)
[2025-06-05 14:17:57] 2025-06-05 12:17:03,329 | INFO     | sum of square deviations: 576985702.0
[2025-06-05 14:17:57] 2025-06-05 12:17:03,330 | INFO     | sum of deviations: 1107794404.0000002
[2025-06-05 14:17:57] 2025-06-05 12:17:03,330 | INFO     | mean x: 1749122028.0
[2025-06-05 14:17:57] 2025-06-05 12:17:03,330 | INFO     | mean y: 2321799.37398374
[2025-06-05 14:17:57] 2025-06-05 12:17:03,331 | INFO     | -- intersect: -3355937491.6535287
[2025-06-05 14:17:57] 2025-06-05 12:17:03,331 | INFO     | intersect: -3355937491.6535287
[2025-06-05 14:17:57] 2025-06-05 12:17:03,331 | INFO     | chi2: 0.0001731214724215038
[2025-06-05 14:17:57] 2025-06-05 12:17:03,331 | INFO     | current chi2=0.0001731214724215038 (change=78.45895542018253 %)
[2025-06-05 14:17:57] 2025-06-05 12:17:03,331 | INFO     | sum of square deviations: 509440249.5
[2025-06-05 14:17:57] 2025-06-05 12:17:03,332 | INFO     | sum of deviations: 802136762.9999998
[2025-06-05 14:17:57] 2025-06-05 12:17:03,332 | INFO     | mean x: 1749122180.5
[2025-06-05 14:17:57] 2025-06-05 12:17:03,332 | INFO     | mean y: 2322485.8474576273
[2025-06-05 14:17:57] 2025-06-05 12:17:03,332 | INFO     | -- intersect: -2751749665.56737
[2025-06-05 14:17:57] 2025-06-05 12:17:03,332 | INFO     | intersect: -2751749665.56737
[2025-06-05 14:17:57] 2025-06-05 12:17:03,332 | INFO     | chi2: 6.253353038121229e-05
[2025-06-05 14:17:57] 2025-06-05 12:17:03,332 | INFO     | current chi2=6.253353038121229e-05 (change=63.87881323643083 %)
[2025-06-05 14:17:57] 2025-06-05 12:17:03,333 | INFO     | sum of square deviations: 447383272.0
[2025-06-05 14:17:57] 2025-06-05 12:17:03,333 | INFO     | sum of deviations: 697558424.0
[2025-06-05 14:17:57] 2025-06-05 12:17:03,333 | INFO     | mean x: 1749122333.0
[2025-06-05 14:17:57] 2025-06-05 12:17:03,333 | INFO     | mean y: 2322743.1415929203
[2025-06-05 14:17:57] 2025-06-05 12:17:03,333 | INFO     | -- intersect: -2724902645.810105
[2025-06-05 14:17:57] 2025-06-05 12:17:03,334 | INFO     | intersect: -2724902645.810105
[2025-06-05 14:17:57] 2025-06-05 12:17:03,334 | INFO     | chi2: 6.178920261612314e-05
[2025-06-05 14:17:57] 2025-06-05 12:17:03,334 | INFO     | current chi2=6.178920261612314e-05 (change=1.1902858523285569 %)
[2025-06-05 14:17:57] 2025-06-05 12:17:03,334 | INFO     | left removable region: 50
[2025-06-05 14:17:57] 2025-06-05 12:17:03,334 | INFO     | sum of square deviations: 170944600.5
[2025-06-05 14:17:57] 2025-06-05 12:17:03,335 | INFO     | sum of deviations: 274338411.0
[2025-06-05 14:17:57] 2025-06-05 12:17:03,335 | INFO     | mean x: 1749122912.5
[2025-06-05 14:17:57] 2025-06-05 12:17:03,335 | INFO     | mean y: 2323256.2682926827
[2025-06-05 14:17:57] 2025-06-05 12:17:03,335 | INFO     | -- intersect: -2804735867.3039784
[2025-06-05 14:17:57] 2025-06-05 12:17:03,335 | INFO     | intersect: -2804735867.3039784
[2025-06-05 14:17:57] 2025-06-05 12:17:03,335 | INFO     | chi2: 2.2544273043674184e-05
[2025-06-05 14:17:57] 2025-06-05 12:17:03,335 | INFO     | -- intersect: -2804735867.3039784
[2025-06-05 14:17:57] 2025-06-05 12:17:03,336 | INFO     | current memory leak: 1.60 B/s (using 82 data points, chi2=0.00)
[2025-06-05 14:17:57] 2025-06-05 12:17:03,336 | INFO     | ..............................
[2025-06-05 14:17:57] 2025-06-05 12:17:03,336 | INFO     | . Timing measurements:
[2025-06-05 14:17:57] 2025-06-05 12:17:03,337 | INFO     | . get job = 0 s
[2025-06-05 14:17:57] 2025-06-05 12:17:03,337 | INFO     | . initial setup = 1 s
[2025-06-05 14:17:57] 2025-06-05 12:17:03,337 | INFO     | . payload setup = 9 s
[2025-06-05 14:17:57] 2025-06-05 12:17:03,337 | INFO     | . stage-in = 0 s
[2025-06-05 14:17:57] 2025-06-05 12:17:03,337 | INFO     | . payload execution = 8423 s
[2025-06-05 14:17:57] 2025-06-05 12:17:03,337 | INFO     | . stage-out = 0 s
[2025-06-05 14:17:57] 2025-06-05 12:17:03,337 | INFO     | . log creation = 0 s
[2025-06-05 14:17:57] 2025-06-05 12:17:03,337 | INFO     | ..............................
[2025-06-05 14:17:57] 2025-06-05 12:17:03,432 | INFO     | 
[2025-06-05 14:17:57] 2025-06-05 12:17:03,433 | INFO     | job summary report
[2025-06-05 14:17:57] 2025-06-05 12:17:03,433 | INFO     | --------------------------------------------------
[2025-06-05 14:17:57] 2025-06-05 12:17:03,434 | INFO     | PanDA job id: 6677676755
[2025-06-05 14:17:57] 2025-06-05 12:17:03,434 | INFO     | task id: 45006595
[2025-06-05 14:17:57] 2025-06-05 12:17:03,434 | INFO     | errors: (none)
[2025-06-05 14:17:57] 2025-06-05 12:17:03,434 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 14:17:57] 2025-06-05 12:17:03,434 | INFO     | pilot state: finished 
[2025-06-05 14:17:57] 2025-06-05 12:17:03,434 | INFO     | transexitcode: 0
[2025-06-05 14:17:57] 2025-06-05 12:17:03,434 | INFO     | exeerrorcode: 0
[2025-06-05 14:17:57] 2025-06-05 12:17:03,434 | INFO     | exeerrordiag: 
[2025-06-05 14:17:57] 2025-06-05 12:17:03,434 | INFO     | exitcode: 0
[2025-06-05 14:17:57] 2025-06-05 12:17:03,434 | INFO     | exitmsg: OK
[2025-06-05 14:17:57] 2025-06-05 12:17:03,434 | INFO     | cpuconsumptiontime: 31816 s
[2025-06-05 14:17:57] 2025-06-05 12:17:03,435 | INFO     | nevents: 400
[2025-06-05 14:17:57] 2025-06-05 12:17:03,435 | INFO     | neventsw: 0
[2025-06-05 14:17:57] 2025-06-05 12:17:03,435 | INFO     | pid: 2702499
[2025-06-05 14:17:57] 2025-06-05 12:17:03,435 | INFO     | pgrp: 2702499
[2025-06-05 14:17:57] 2025-06-05 12:17:03,435 | INFO     | corecount: 4
[2025-06-05 14:17:57] 2025-06-05 12:17:03,435 | INFO     | event service: False
[2025-06-05 14:17:57] 2025-06-05 12:17:03,435 | INFO     | sizes: {0: 2397182, 1: 2397381, 7: 2397587, 11: 2397615, 8436: 2425769, 8437: 2434732, 8438: 2434916, 8447: 2435086}
[2025-06-05 14:17:57] 2025-06-05 12:17:03,435 | INFO     | --------------------------------------------------
[2025-06-05 14:17:57] 2025-06-05 12:17:03,435 | INFO     | 
[2025-06-05 14:17:57] 2025-06-05 12:17:03,435 | INFO     | executing command: ls -lF /scratch/boinc/var/slot84/slots/0
[2025-06-05 14:17:57] 2025-06-05 12:17:03,463 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 14:17:57] 2025-06-05 12:17:03,464 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 14:17:57] 2025-06-05 12:17:03,464 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 14:17:57] 2025-06-05 12:17:03,464 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 14:17:57] 2025-06-05 12:17:03,464 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 14:17:57] 2025-06-05 12:17:03,464 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 14:17:57] 2025-06-05 12:17:03,464 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 14:17:57] 2025-06-05 12:17:03,464 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 14:17:57] 2025-06-05 12:17:03,464 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 14:17:57] 2025-06-05 12:17:03,465 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 14:17:57] 2025-06-05 12:17:03,465 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 14:17:57] 2025-06-05 12:17:03,465 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 14:17:57] 2025-06-05 12:17:03,465 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 14:17:57] 2025-06-05 12:17:03,465 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 14:17:57] 2025-06-05 12:17:03,465 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 14:17:57] 2025-06-05 12:17:03,465 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 14:17:57] 2025-06-05 12:17:03,465 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 14:17:57] 2025-06-05 12:17:03,465 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 14:17:57] 2025-06-05 12:17:03,466 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 14:17:57] 2025-06-05 12:17:03,466 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 14:17:57] 2025-06-05 12:17:03,466 | INFO     | job 6677676755 has completed (purged errors)
[2025-06-05 14:17:57] 2025-06-05 12:17:03,466 | INFO     | overall cleanup function is called
[2025-06-05 14:17:57] 2025-06-05 12:17:03,480 | INFO     | PID=2694637 has CPU usage=16.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 14:17:57] 2025-06-05 12:17:03,480 | INFO     | .. there are 15 such processes running
[2025-06-05 14:17:57] 2025-06-05 12:17:04,478 | INFO     | --- collectZombieJob: --- 10, [2702499]
[2025-06-05 14:17:57] 2025-06-05 12:17:04,478 | INFO     | zombie collector waiting for pid 2702499
[2025-06-05 14:17:57] 2025-06-05 12:17:04,478 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 14:17:57] 2025-06-05 12:17:04,479 | INFO     | collected zombie processes
[2025-06-05 14:17:57] 2025-06-05 12:17:04,479 | INFO     | will attempt to kill all subprocesses of pid=2702499
[2025-06-05 14:17:57] 2025-06-05 12:17:05,176 | INFO     | process IDs to be killed: [2702499] (in reverse order)
[2025-06-05 14:17:57] 2025-06-05 12:17:05,429 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 14:17:57] 2025-06-05 12:17:05,429 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 14:17:57] 2025-06-05 12:17:05,458 | INFO     | did not find any defunct processes belonging to 2702499
[2025-06-05 14:17:57] 2025-06-05 12:17:05,486 | INFO     | did not find any defunct processes belonging to 2702499
[2025-06-05 14:17:57] 2025-06-05 12:17:05,487 | INFO     | ready for new job
[2025-06-05 14:17:57] 2025-06-05 12:17:05,487 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 14:17:57] 2025-06-05 12:17:05,489 | INFO     | **************************************
[2025-06-05 14:17:57] 2025-06-05 12:17:05,489 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 14:17:57] 2025-06-05 12:17:05,489 | INFO     | **************************************
[2025-06-05 14:17:57] 2025-06-05 12:17:05,489 | INFO     | 
[2025-06-05 14:17:57] 2025-06-05 12:17:05,497 | INFO     | architecture information:
[2025-06-05 14:17:57] 2025-06-05 12:17:05,497 | INFO     | executing command: cat /etc/os-release
[2025-06-05 14:17:57] 2025-06-05 12:17:05,524 | INFO     | cat /etc/os-release:
[2025-06-05 14:17:57] NAME="CentOS Linux"
[2025-06-05 14:17:57] VERSION="7 (Core)"
[2025-06-05 14:17:57] ID="centos"
[2025-06-05 14:17:57] ID_LIKE="rhel fedora"
[2025-06-05 14:17:57] VERSION_ID="7"
[2025-06-05 14:17:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 14:17:57] ANSI_COLOR="0;31"
[2025-06-05 14:17:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 14:17:57] HOME_URL="https://www.centos.org/"
[2025-06-05 14:17:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 14:17:57] 
[2025-06-05 14:17:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 14:17:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 14:17:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 14:17:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 14:17:57] 
[2025-06-05 14:17:57] 2025-06-05 12:17:05,524 | INFO     | **************************************
[2025-06-05 14:17:57] 2025-06-05 12:17:06,027 | INFO     | executing command: df -mP /scratch/boinc/var/slot84/slots/0
[2025-06-05 14:17:57] 2025-06-05 12:17:06,050 | INFO     | sufficient remaining disk space (3286439559168 B)
[2025-06-05 14:17:57] 2025-06-05 12:17:06,051 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 14:17:57] 2025-06-05 12:17:06,051 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 14:17:57] 2025-06-05 12:17:06,051 | INFO     | update_server=False
[2025-06-05 14:17:57] 2025-06-05 12:17:06,051 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 14:17:57] 2025-06-05 12:17:06,051 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 14:17:57] 2025-06-05 12:17:06,052 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 14:17:57] 2025-06-05 12:17:06,052 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 14:17:57] 2025-06-05 12:17:06,052 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 14:17:57] 2025-06-05 12:17:06,422 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 14:17:57] 2025-06-05 12:17:06,423 | INFO     | aborting loop
[2025-06-05 14:17:57] 2025-06-05 12:17:06,450 | INFO     | all data control threads have been joined
[2025-06-05 14:17:57] 2025-06-05 12:17:06,877 | INFO     | all payload control threads have been joined
[2025-06-05 14:17:57] 2025-06-05 12:17:07,056 | INFO     | [job] retrieve thread has finished
[2025-06-05 14:17:57] 2025-06-05 12:17:07,181 | INFO     | [data] copytool_in thread has finished
[2025-06-05 14:17:57] 2025-06-05 12:17:07,262 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 14:17:57] 2025-06-05 12:17:07,300 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 14:17:57] 2025-06-05 12:17:07,361 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 14:17:57] 2025-06-05 12:17:07,427 | INFO     | [job] job monitor thread has finished
[2025-06-05 14:17:57] 2025-06-05 12:17:07,455 | INFO     | [data] control thread has finished
[2025-06-05 14:17:57] 2025-06-05 12:17:07,461 | INFO     | all job control threads have been joined
[2025-06-05 14:17:57] 2025-06-05 12:17:07,833 | INFO     | [payload] failed_post thread has finished
[2025-06-05 14:17:57] 2025-06-05 12:17:07,882 | INFO     | [payload] control thread has finished
[2025-06-05 14:17:57] 2025-06-05 12:17:08,301 | INFO     | [payload] validate_post thread has finished
[2025-06-05 14:17:57] 2025-06-05 12:17:08,361 | INFO     | [job] validate thread has finished
[2025-06-05 14:17:57] 2025-06-05 12:17:08,419 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 14:17:57] 2025-06-05 12:17:08,442 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 14:17:57] 2025-06-05 12:17:08,466 | INFO     | [job] control thread has finished
[2025-06-05 14:17:57] 2025-06-05 12:17:09,267 | INFO     | [data] copytool_out thread has finished
[2025-06-05 14:17:57] 2025-06-05 12:17:09,374 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 14:17:57] 2025-06-05 12:17:09,447 | INFO     | [job] queue monitor thread has finished
[2025-06-05 14:17:57] 2025-06-05 12:17:13,380 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 14:17:57] 2025-06-05 12:17:16,576 | INFO     | job.realtimelogging is not enabled
[2025-06-05 14:17:57] 2025-06-05 12:17:17,581 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 14:17:57] 2025-06-05 12:17:17,582 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22776708237120)>', '<ExcThread(monitor, started 22776402388736)>']
[2025-06-05 14:17:57] 2025-06-05 12:17:18,112 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 14:17:57] 2025-06-05 12:17:18,112 | INFO     | [monitor] control thread has ended
[2025-06-05 14:17:57] 2025-06-05 12:17:22,589 | INFO     | all workflow threads have been joined
[2025-06-05 14:17:57] 2025-06-05 12:17:22,590 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 14:17:57] 2025-06-05 12:17:22,590 | INFO     | traces error code: 0
[2025-06-05 14:17:57] 2025-06-05 12:17:22,590 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 14:17:57] 2025-06-05 12:17:22,794 [wrapper] ==== pilot stdout END ====
[2025-06-05 14:17:57] 2025-06-05 12:17:22,798 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 14:17:57] 2025-06-05 12:17:22,801 [wrapper] pilotpid: 2694637
[2025-06-05 14:17:57] 2025-06-05 12:17:22,804 [wrapper] Pilot exit status: 0
[2025-06-05 14:17:57] 2025-06-05 12:17:22,819 [wrapper] pandaids: 6677676755
[2025-06-05 14:17:57] 2025-06-05 12:17:22,977 [wrapper] cleanup supervisor_pilot 3208056 2694638
[2025-06-05 14:17:57] 2025-06-05 12:17:22,981 [wrapper] Test setup, not cleaning
[2025-06-05 14:17:57] 2025-06-05 12:17:22,985 [wrapper] apfmon messages muted
[2025-06-05 14:17:57] 2025-06-05 12:17:22,990 [wrapper] ==== wrapper stdout END ====
[2025-06-05 14:17:57] 2025-06-05 12:17:22,994 [wrapper] ==== wrapper stderr END ====
[2025-06-05 14:17:57]  *** Error codes and diagnostics ***
[2025-06-05 14:17:57]     "exeErrorCode": 0,
[2025-06-05 14:17:57]     "exeErrorDiag": "",
[2025-06-05 14:17:57]     "pilotErrorCode": 0,
[2025-06-05 14:17:57]     "pilotErrorDiag": "",
[2025-06-05 14:17:57]  *** Listing of results directory ***
[2025-06-05 14:17:57] total 385996
[2025-06-05 14:17:57] -rw-r--r-- 1 boinc boinc    495897 Jun  3 17:19 pilot3.tar.gz
[2025-06-05 14:17:57] -rw-r--r-- 1 boinc boinc      5111 Jun  3 17:29 queuedata.json
[2025-06-05 14:17:57] -rwx------ 1 boinc boinc     37140 Jun  3 17:30 runpilot2-wrapper.sh
[2025-06-05 14:17:57] -rw-r--r-- 1 boinc boinc       100 Jun  5 11:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 14:17:57] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 11:55 run_atlas
[2025-06-05 14:17:57] -rw-r--r-- 1 boinc boinc       105 Jun  5 11:55 job.xml
[2025-06-05 14:17:57] -rw-r--r-- 1 boinc boinc      6685 Jun  5 11:55 init_data.xml
[2025-06-05 14:17:57] -rw-r--r-- 2 boinc boinc 213587029 Jun  5 11:55 EVNT.45006593._001480.pool.root.1
[2025-06-05 14:17:57] -rw-r--r-- 2 boinc boinc     15093 Jun  5 11:55 start_atlas.sh
[2025-06-05 14:17:57] drwxrwx--x 2 boinc boinc      4096 Jun  5 11:55 shared
[2025-06-05 14:17:57] -rw-r--r-- 2 boinc boinc    508881 Jun  5 11:55 input.tar.gz
[2025-06-05 14:17:57] -rw-r--r-- 1 boinc boinc         0 Jun  5 11:55 boinc_lockfile
[2025-06-05 14:17:57] -rw-r--r-- 1 boinc boinc      2525 Jun  5 11:55 pandaJob.out
[2025-06-05 14:17:57] -rw------- 1 boinc boinc    983289 Jun  5 11:55 agis_schedconf.cvmfs.json
[2025-06-05 14:17:57] -rw------- 1 boinc boinc   1598969 Jun  5 11:55 agis_ddmendpoints.agis.ALL.json
[2025-06-05 14:17:57] drwx------ 4 boinc boinc      4096 Jun  5 11:55 pilot3
[2025-06-05 14:17:57] -rw------- 1 boinc boinc 175662269 Jun  5 14:16 HITS.45006595._036845.pool.root.1
[2025-06-05 14:17:57] -rw-r--r-- 1 boinc boinc       528 Jun  5 14:16 boinc_task_state.xml
[2025-06-05 14:17:57] -rw------- 1 boinc boinc      1028 Jun  5 14:16 memory_monitor_summary.json
[2025-06-05 14:17:57] -rw------- 1 boinc boinc        95 Jun  5 14:16 pilot_heartbeat.json
[2025-06-05 14:17:57] -rw------- 1 boinc boinc    288004 Jun  5 14:16 log.45006595._036845.job.log.tgz.1
[2025-06-05 14:17:57] -rw------- 1 boinc boinc      7697 Jun  5 14:17 heartbeat.json
[2025-06-05 14:17:57] -rw------- 1 boinc boinc      4559 Jun  5 14:17 pilotlog.txt
[2025-06-05 14:17:57] -rw------- 1 boinc boinc    800857 Jun  5 14:17 log.45006595._036845.job.log.1
[2025-06-05 14:17:57] -rw------- 1 boinc boinc       357 Jun  5 14:17 output.list
[2025-06-05 14:17:57] -rw-r--r-- 1 boinc boinc       620 Jun  5 14:17 runtime_log
[2025-06-05 14:17:57] -rw------- 1 boinc boinc   1105920 Jun  5 14:17 result.tar.gz
[2025-06-05 14:17:57] -rw-r--r-- 1 boinc boinc      9025 Jun  5 14:17 runtime_log.err
[2025-06-05 14:17:57] -rw------- 1 boinc boinc       662 Jun  5 14:17 YYuLDmUmig7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtnkKDmL862Oo.diag
[2025-06-05 14:17:57] -rw-r--r-- 1 boinc boinc        26 Jun  5 14:17 wrapper_checkpoint.txt
[2025-06-05 14:17:57] -rw-r--r-- 1 boinc boinc      8192 Jun  5 14:17 boinc_mmap_file
[2025-06-05 14:17:57] -rw-r--r-- 1 boinc boinc     20727 Jun  5 14:17 stderr.txt
[2025-06-05 14:17:57] HITS file was successfully produced:
[2025-06-05 14:17:57] -rw------- 1 boinc boinc 175662269 Jun  5 14:16 shared/HITS.pool.root.1
[2025-06-05 14:17:57]  *** Contents of shared directory: ***
[2025-06-05 14:17:57] total 381736
[2025-06-05 14:17:57] -rw-r--r-- 2 boinc boinc 213587029 Jun  5 11:55 ATLAS.root_0
[2025-06-05 14:17:57] -rw-r--r-- 2 boinc boinc     15093 Jun  5 11:55 start_atlas.sh
[2025-06-05 14:17:57] -rw-r--r-- 2 boinc boinc    508881 Jun  5 11:55 input.tar.gz
[2025-06-05 14:17:57] -rw------- 1 boinc boinc 175662269 Jun  5 14:16 HITS.pool.root.1
[2025-06-05 14:17:57] -rw------- 1 boinc boinc   1105920 Jun  5 14:17 result.tar.gz
14:17:59 (2690617): run_atlas exited; CPU time 32309.507605
14:17:59 (2690617): called boinc_finish(0)

</stderr_txt>
]]>

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