Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:53:34 (672145): wrapper (7.7.26015): starting
13:53:34 (672145): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 13:53:34] Arguments: --nthreads 8
[2025-06-03 13:53:34] Threads: 8
[2025-06-03 13:53:34] Checking for CVMFS
[2025-06-03 13:53:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:53:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:53:34] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:53:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:53:34] 2.12.6.0 9880 222 70704 146750 1 186 18918440 32935936 3449 16776704 0 1126382 99.998 76680 40443 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 13:53:34] CVMFS is ok
[2025-06-03 13:53:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 13:53:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 13:53:34] Further information can be found at the LHC@home message board.
[2025-06-03 13:53:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:53:34] Checking for apptainer binary...
[2025-06-03 13:53:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:53:34] Running /usr/bin/apptainer --version
[2025-06-03 13:53:34] apptainer version 1.4.1-1.el9
[2025-06-03 13:53:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:53:34] c-8-39.aglt2.org
[2025-06-03 13:53:34] apptainer works
[2025-06-03 13:53:34] Set ATHENA_PROC_NUMBER=8
[2025-06-03 13:53:34] Set ATHENA_CORE_NUMBER=8
[2025-06-03 13:53:34] Starting ATLAS job with PandaID=6677621198
[2025-06-03 13:53:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 15:25:14]  *** The last 200 lines of the pilot log: ***
[2025-06-03 15:25:14]  status_code=0
[2025-06-03 15:25:14]  storage_token=
[2025-06-03 15:25:14]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6677621198/log.45006595._033407.job.log.tgz.1
[2025-06-03 15:25:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/44/91/log.45006595._033407.job.log.tgz.1
[2025-06-03 15:25:14]  workdir=None
[2025-06-03 15:25:14] ]
[2025-06-03 15:25:14] 2025-06-03 19:24:49,727 | INFO     | transferring file log.45006595._033407.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6677621198/log.45006595._033407.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 15:25:14] 2025-06-03 19:24:49,727 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6677621198/log.45006595._033407.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._033407.job
[2025-06-03 15:25:14] 2025-06-03 19:24:49,737 | INFO     | adding to output.list: log.45006595._033407.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/44/91/log.45006595._033407.job.log.tg
[2025-06-03 15:25:14] 2025-06-03 19:24:49,738 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 15:25:14] 2025-06-03 19:24:49,738 | INFO     | summary of transferred files:
[2025-06-03 15:25:14] 2025-06-03 19:24:49,738 | INFO     |  -- lfn=log.45006595._033407.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 15:25:14] 2025-06-03 19:24:49,738 | INFO     | stage-out finished correctly
[2025-06-03 15:25:14] 2025-06-03 19:24:51,203 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 15:25:14] 2025-06-03 19:24:51,849 | INFO     | job 6677621198 has state=finished
[2025-06-03 15:25:14] 2025-06-03 19:24:51,850 | INFO     | preparing for final server update for job 6677621198 in state='finished'
[2025-06-03 15:25:14] 2025-06-03 19:24:51,850 | INFO     | this job has now completed (state=finished)
[2025-06-03 15:25:14] 2025-06-03 19:24:51,850 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 15:25:14] 2025-06-03 19:24:51,850 | INFO     | log transfer has been attempted: DONE
[2025-06-03 15:25:14] 2025-06-03 19:24:51,851 | INFO     | job 6677621198 has finished - writing final server update
[2025-06-03 15:25:14] 2025-06-03 19:24:51,851 | INFO     | total number of processed events: 400 (read)
[2025-06-03 15:25:14] 2025-06-03 19:24:51,866 | INFO     | executing command: lscpu
[2025-06-03 15:25:14] 2025-06-03 19:24:51,917 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 15:25:14] 2025-06-03 19:24:53,146 | WARNING  | process 682415 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 15:25:14] 2025-06-03 19:24:53,147 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6677621198/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 15:25:14] 2025-06-03 19:24:53,147 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6677621198/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 15:25:14] 2025-06-03 19:24:53,148 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3419078 B
[2025-06-03 15:25:14] 2025-06-03 19:24:53,148 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16028 B
[2025-06-03 15:25:14] 2025-06-03 19:24:53,148 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-03 15:25:14] 2025-06-03 19:24:54,270 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 15:25:14] 2025-06-03 19:24:54,271 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6677621198/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 15:25:14] 2025-06-03 19:24:54,275 | INFO     | extracted standard info from prmon json
[2025-06-03 15:25:14] 2025-06-03 19:24:54,275 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 15:25:14] 2025-06-03 19:24:54,275 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 15:25:14] 2025-06-03 19:24:54,276 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 15:25:14] 2025-06-03 19:24:54,276 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 15:25:14] 2025-06-03 19:24:54,279 | INFO     | fitting pss+swap vs Time
[2025-06-03 15:25:14] 2025-06-03 19:24:54,279 | INFO     | sum of square deviations: 177275882.0
[2025-06-03 15:25:14] 2025-06-03 19:24:54,279 | INFO     | sum of deviations: 8633597058.0
[2025-06-03 15:25:14] 2025-06-03 19:24:54,280 | INFO     | mean x: 1748976049.0
[2025-06-03 15:25:14] 2025-06-03 19:24:54,280 | INFO     | sufficient remaining disk space (73451700224 B)
[2025-06-03 15:25:14] 2025-06-03 19:24:54,280 | INFO     | mean y: 2122694.5542168673
[2025-06-03 15:25:14] 2025-06-03 19:24:54,281 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-03 15:25:14] 2025-06-03 19:24:54,281 | INFO     | -- intersect: -85175591841.701
[2025-06-03 15:25:14] 2025-06-03 19:24:54,281 | INFO     | intersect: -85175591841.701
[2025-06-03 15:25:14] 2025-06-03 19:24:54,281 | INFO     | chi2: 0.8447410879394971
[2025-06-03 15:25:14] 2025-06-03 19:24:54,282 | INFO     | -- intersect: -85175591841.701
[2025-06-03 15:25:14] 2025-06-03 19:24:54,282 | INFO     | current memory leak: 48.70 B/s (using 83 data points, chi2=0.84)
[2025-06-03 15:25:14] 2025-06-03 19:24:54,282 | INFO     | ..............................
[2025-06-03 15:25:14] 2025-06-03 19:24:54,283 | INFO     | . Timing measurements:
[2025-06-03 15:25:14] 2025-06-03 19:24:54,283 | INFO     | . get job = 0 s
[2025-06-03 15:25:14] 2025-06-03 19:24:54,283 | INFO     | . initial setup = 2 s
[2025-06-03 15:25:14] 2025-06-03 19:24:54,283 | INFO     | . payload setup = 4 s
[2025-06-03 15:25:14] 2025-06-03 19:24:54,283 | INFO     | . stage-in = 0 s
[2025-06-03 15:25:14] 2025-06-03 19:24:54,283 | INFO     | . payload execution = 5445 s
[2025-06-03 15:25:14] 2025-06-03 19:24:54,284 | INFO     | . stage-out = 0 s
[2025-06-03 15:25:14] 2025-06-03 19:24:54,284 | INFO     | . log creation = 0 s
[2025-06-03 15:25:14] 2025-06-03 19:24:54,284 | INFO     | ..............................
[2025-06-03 15:25:14] 2025-06-03 19:24:54,284 | INFO     | size of work directory /tmp/boinchome/slots/2/PanDA_Pilot-6677621198: 3723158 B (within 2537553920 B limit)
[2025-06-03 15:25:14] 2025-06-03 19:24:54,284 | INFO     | pfn file=/tmp/boinchome/slots/2/PanDA_Pilot-6677621198/HITS.45006595._033407.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-03 15:25:14] 2025-06-03 19:24:54,285 | INFO     | total size of present files: 0 B (workdir size: 3723158 B)
[2025-06-03 15:25:14] 2025-06-03 19:24:54,285 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/2/PanDA_Pilot-6677621198/HITS.45006595._033407.pool.root.1 since it does not exist
[2025-06-03 15:25:14] 2025-06-03 19:24:54,547 | INFO     | number of running child processes to parent process 682415: 1
[2025-06-03 15:25:14] 2025-06-03 19:24:54,548 | INFO     | maximum number of monitored processes: 6
[2025-06-03 15:25:14] 2025-06-03 19:24:54,548 | INFO     | aborting job monitoring since job object (job id=6677621198) has expired
[2025-06-03 15:25:14] 2025-06-03 19:24:54,615 | INFO     | 
[2025-06-03 15:25:14] 2025-06-03 19:24:54,616 | INFO     | job summary report
[2025-06-03 15:25:14] 2025-06-03 19:24:54,616 | INFO     | --------------------------------------------------
[2025-06-03 15:25:14] 2025-06-03 19:24:54,616 | INFO     | PanDA job id: 6677621198
[2025-06-03 15:25:14] 2025-06-03 19:24:54,616 | INFO     | task id: 45006595
[2025-06-03 15:25:14] 2025-06-03 19:24:54,616 | INFO     | errors: (none)
[2025-06-03 15:25:14] 2025-06-03 19:24:54,616 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 15:25:14] 2025-06-03 19:24:54,616 | INFO     | pilot state: finished 
[2025-06-03 15:25:14] 2025-06-03 19:24:54,617 | INFO     | transexitcode: 0
[2025-06-03 15:25:14] 2025-06-03 19:24:54,617 | INFO     | exeerrorcode: 0
[2025-06-03 15:25:14] 2025-06-03 19:24:54,617 | INFO     | exeerrordiag: 
[2025-06-03 15:25:14] 2025-06-03 19:24:54,617 | INFO     | exitcode: 0
[2025-06-03 15:25:14] 2025-06-03 19:24:54,617 | INFO     | exitmsg: OK
[2025-06-03 15:25:14] 2025-06-03 19:24:54,617 | INFO     | cpuconsumptiontime: 38673 s
[2025-06-03 15:25:14] 2025-06-03 19:24:54,617 | INFO     | nevents: 400
[2025-06-03 15:25:14] 2025-06-03 19:24:54,617 | INFO     | neventsw: 0
[2025-06-03 15:25:14] 2025-06-03 19:24:54,618 | INFO     | pid: 682415
[2025-06-03 15:25:14] 2025-06-03 19:24:54,618 | INFO     | pgrp: 682415
[2025-06-03 15:25:14] 2025-06-03 19:24:54,618 | INFO     | corecount: 8
[2025-06-03 15:25:14] 2025-06-03 19:24:54,618 | INFO     | event service: False
[2025-06-03 15:25:14] 2025-06-03 19:24:54,618 | INFO     | sizes: {0: 2405013, 1: 2405212, 3: 2405418, 11: 2405446, 5453: 2431906, 5454: 2440847, 5455: 2441031, 5458: 2441229}
[2025-06-03 15:25:14] 2025-06-03 19:24:54,618 | INFO     | --------------------------------------------------
[2025-06-03 15:25:14] 2025-06-03 19:24:54,618 | INFO     | 
[2025-06-03 15:25:14] 2025-06-03 19:24:54,618 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-03 15:25:14] 2025-06-03 19:24:54,631 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 15:25:14] 2025-06-03 19:24:54,631 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 15:25:14] 2025-06-03 19:24:54,631 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 15:25:14] 2025-06-03 19:24:54,631 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 15:25:14] 2025-06-03 19:24:54,632 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 15:25:14] 2025-06-03 19:24:54,632 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 15:25:14] 2025-06-03 19:24:54,632 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 15:25:14] 2025-06-03 19:24:54,632 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 15:25:14] 2025-06-03 19:24:54,632 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 15:25:14] 2025-06-03 19:24:54,632 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 15:25:14] 2025-06-03 19:24:54,632 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 15:25:14] 2025-06-03 19:24:54,632 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 15:25:14] 2025-06-03 19:24:54,633 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 15:25:14] 2025-06-03 19:24:54,633 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 15:25:14] 2025-06-03 19:24:54,633 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 15:25:14] 2025-06-03 19:24:54,633 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 15:25:14] 2025-06-03 19:24:54,633 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 15:25:14] 2025-06-03 19:24:54,633 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 15:25:14] 2025-06-03 19:24:54,633 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 15:25:14] 2025-06-03 19:24:54,634 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 15:25:14] 2025-06-03 19:24:54,634 | INFO     | job 6677621198 has completed (purged errors)
[2025-06-03 15:25:14] 2025-06-03 19:24:54,634 | INFO     | overall cleanup function is called
[2025-06-03 15:25:14] 2025-06-03 19:24:55,217 | INFO     | PID=675837 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-03 15:25:14] 2025-06-03 19:24:55,217 | INFO     | .. there are 6 such processes running
[2025-06-03 15:25:14] 2025-06-03 19:24:55,642 | INFO     | --- collectZombieJob: --- 10, [682415]
[2025-06-03 15:25:14] 2025-06-03 19:24:55,642 | INFO     | zombie collector waiting for pid 682415
[2025-06-03 15:25:14] 2025-06-03 19:24:55,642 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 15:25:14] 2025-06-03 19:24:55,642 | INFO     | collected zombie processes
[2025-06-03 15:25:14] 2025-06-03 19:24:55,642 | INFO     | will attempt to kill all subprocesses of pid=682415
[2025-06-03 15:25:14] 2025-06-03 19:24:55,838 | INFO     | process IDs to be killed: [682415] (in reverse order)
[2025-06-03 15:25:14] 2025-06-03 19:24:55,880 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 15:25:14] 2025-06-03 19:24:55,881 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 15:25:14] 2025-06-03 19:24:55,885 | INFO     | did not find any defunct processes belonging to 682415
[2025-06-03 15:25:14] 2025-06-03 19:24:55,889 | INFO     | did not find any defunct processes belonging to 682415
[2025-06-03 15:25:14] 2025-06-03 19:24:55,889 | INFO     | ready for new job
[2025-06-03 15:25:14] 2025-06-03 19:24:55,889 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 15:25:14] 2025-06-03 19:24:55,890 | INFO     | **************************************
[2025-06-03 15:25:14] 2025-06-03 19:24:55,890 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 15:25:14] 2025-06-03 19:24:55,890 | INFO     | **************************************
[2025-06-03 15:25:14] 2025-06-03 19:24:55,890 | INFO     | 
[2025-06-03 15:25:14] 2025-06-03 19:24:55,903 | INFO     | architecture information:
[2025-06-03 15:25:14] 2025-06-03 19:24:55,903 | INFO     | executing command: cat /etc/os-release
[2025-06-03 15:25:14] 2025-06-03 19:24:55,910 | INFO     | cat /etc/os-release:
[2025-06-03 15:25:14] NAME="CentOS Linux"
[2025-06-03 15:25:14] VERSION="7 (Core)"
[2025-06-03 15:25:14] ID="centos"
[2025-06-03 15:25:14] ID_LIKE="rhel fedora"
[2025-06-03 15:25:14] VERSION_ID="7"
[2025-06-03 15:25:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 15:25:14] ANSI_COLOR="0;31"
[2025-06-03 15:25:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 15:25:14] HOME_URL="https://www.centos.org/"
[2025-06-03 15:25:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 15:25:14] 
[2025-06-03 15:25:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 15:25:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 15:25:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 15:25:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 15:25:14] 
[2025-06-03 15:25:14] 2025-06-03 19:24:55,911 | INFO     | **************************************
[2025-06-03 15:25:14] 2025-06-03 19:24:56,413 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-03 15:25:14] 2025-06-03 19:24:56,422 | INFO     | sufficient remaining disk space (73455894528 B)
[2025-06-03 15:25:14] 2025-06-03 19:24:56,423 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 15:25:14] 2025-06-03 19:24:56,423 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 15:25:14] 2025-06-03 19:24:56,423 | INFO     | update_server=False
[2025-06-03 15:25:14] 2025-06-03 19:24:56,423 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 15:25:14] 2025-06-03 19:24:56,423 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:25:14] 2025-06-03 19:24:56,423 | INFO     | aborting loop
[2025-06-03 15:25:14] 2025-06-03 19:24:56,470 | INFO     | all data control threads have been joined
[2025-06-03 15:25:14] 2025-06-03 19:24:57,202 | INFO     | all payload control threads have been joined
[2025-06-03 15:25:14] 2025-06-03 19:24:57,223 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 15:25:14] 2025-06-03 19:24:57,223 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 15:25:14] 2025-06-03 19:24:57,223 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 15:25:14] 2025-06-03 19:24:57,307 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 15:25:14] 2025-06-03 19:24:57,428 | INFO     | [job] retrieve thread has finished
[2025-06-03 15:25:14] 2025-06-03 19:24:57,428 | INFO     | [job] job monitor thread has finished
[2025-06-03 15:25:14] 2025-06-03 19:24:57,471 | INFO     | [payload] failed_post thread has finished
[2025-06-03 15:25:14] 2025-06-03 19:24:57,475 | INFO     | [data] control thread has finished
[2025-06-03 15:25:14] 2025-06-03 19:24:57,702 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 15:25:14] 2025-06-03 19:24:57,756 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 15:25:14] 2025-06-03 19:24:57,803 | INFO     | all job control threads have been joined
[2025-06-03 15:25:14] 2025-06-03 19:24:57,804 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 15:25:14] 2025-06-03 19:24:58,208 | INFO     | [payload] control thread has finished
[2025-06-03 15:25:14] 2025-06-03 19:24:58,308 | INFO     | [payload] validate_post thread has finished
[2025-06-03 15:25:14] 2025-06-03 19:24:58,691 | INFO     | [job] validate thread has finished
[2025-06-03 15:25:14] 2025-06-03 19:24:58,808 | INFO     | [job] control thread has finished
[2025-06-03 15:25:14] 2025-06-03 19:24:58,814 | INFO     | [data] copytool_in thread has finished
[2025-06-03 15:25:14] 2025-06-03 19:24:58,896 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 15:25:14] 2025-06-03 19:24:59,393 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:25:14] 2025-06-03 19:24:59,809 | INFO     | [data] copytool_out thread has finished
[2025-06-03 15:25:14] 2025-06-03 19:25:00,398 | INFO     | [job] queue monitor thread has finished
[2025-06-03 15:25:14] 2025-06-03 19:25:01,313 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 15:25:14] 2025-06-03 19:25:07,071 | INFO     | job.realtimelogging is not enabled
[2025-06-03 15:25:14] 2025-06-03 19:25:08,076 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 15:25:14] 2025-06-03 19:25:09,128 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139850907637568)>', '<ExcThread(monitor, started 139850409817856)>']
[2025-06-03 15:25:14] 2025-06-03 19:25:09,283 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 15:25:14] 2025-06-03 19:25:09,283 | INFO     | [monitor] control thread has ended
[2025-06-03 15:25:14] 2025-06-03 19:25:14,154 | INFO     | all workflow threads have been joined
[2025-06-03 15:25:14] 2025-06-03 19:25:14,154 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 15:25:14] 2025-06-03 19:25:14,154 | INFO     | traces error code: 0
[2025-06-03 15:25:14] 2025-06-03 19:25:14,154 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 15:25:14] 2025-06-03 19:25:14,248 [wrapper] ==== pilot stdout END ====
[2025-06-03 15:25:14] 2025-06-03 19:25:14,250 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 15:25:14] 2025-06-03 19:25:14,252 [wrapper] pilotpid: 675837
[2025-06-03 15:25:14] 2025-06-03 19:25:14,253 [wrapper] Pilot exit status: 0
[2025-06-03 15:25:14] 2025-06-03 19:25:14,259 [wrapper] pandaids: 6677621198
[2025-06-03 15:25:14] 2025-06-03 19:25:14,288 [wrapper] cleanup supervisor_pilot  892343 675838
[2025-06-03 15:25:14] 2025-06-03 19:25:14,290 [wrapper] Test setup, not cleaning
[2025-06-03 15:25:14] 2025-06-03 19:25:14,292 [wrapper] apfmon messages muted
[2025-06-03 15:25:14] 2025-06-03 19:25:14,293 [wrapper] ==== wrapper stdout END ====
[2025-06-03 15:25:14] 2025-06-03 19:25:14,295 [wrapper] ==== wrapper stderr END ====
[2025-06-03 15:25:14]  *** Error codes and diagnostics ***
[2025-06-03 15:25:14]     "exeErrorCode": 0,
[2025-06-03 15:25:14]     "exeErrorDiag": "",
[2025-06-03 15:25:14]     "pilotErrorCode": 0,
[2025-06-03 15:25:14]     "pilotErrorDiag": "",
[2025-06-03 15:25:14]  *** Listing of results directory ***
[2025-06-03 15:25:14] total 394660
[2025-06-03 15:25:14] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 08:59 pilot3.tar.gz
[2025-06-03 15:25:14] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 09:09 queuedata.json
[2025-06-03 15:25:14] -rwx------. 1 boincer umatlas     37140 Jun  3 09:10 runpilot2-wrapper.sh
[2025-06-03 15:25:14] -rw-r--r--. 1 boincer umatlas       100 Jun  3 13:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 15:25:14] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 13:53 run_atlas
[2025-06-03 15:25:14] -rw-r--r--. 1 boincer umatlas       105 Jun  3 13:53 job.xml
[2025-06-03 15:25:14] -rw-r--r--. 2 boincer umatlas 216600500 Jun  3 13:53 EVNT.45006593._001344.pool.root.1
[2025-06-03 15:25:14] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:53 start_atlas.sh
[2025-06-03 15:25:14] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 13:53 shared
[2025-06-03 15:25:14] -rw-r--r--. 2 boincer umatlas    508877 Jun  3 13:53 input.tar.gz
[2025-06-03 15:25:14] -rw-r--r--. 1 boincer umatlas         0 Jun  3 13:53 boinc_lockfile
[2025-06-03 15:25:14] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 13:53 pandaJob.out
[2025-06-03 15:25:14] -rw-------. 1 boincer umatlas    985078 Jun  3 13:53 agis_schedconf.cvmfs.json
[2025-06-03 15:25:14] -rw-------. 1 boincer umatlas   1603667 Jun  3 13:53 agis_ddmendpoints.agis.ALL.json
[2025-06-03 15:25:14] drwx------. 4 boincer umatlas      4096 Jun  3 13:53 pilot3
[2025-06-03 15:25:14] -rw-r--r--. 1 boincer umatlas      6613 Jun  3 15:20 init_data.xml
[2025-06-03 15:25:14] -rw-------. 1 boincer umatlas 181996381 Jun  3 15:24 HITS.45006595._033407.pool.root.1
[2025-06-03 15:25:14] -rw-r--r--. 1 boincer umatlas       529 Jun  3 15:24 boinc_task_state.xml
[2025-06-03 15:25:14] -rw-------. 1 boincer umatlas        95 Jun  3 15:24 pilot_heartbeat.json
[2025-06-03 15:25:14] -rw-------. 1 boincer umatlas      1032 Jun  3 15:24 memory_monitor_summary.json
[2025-06-03 15:25:14] -rw-------. 1 boincer umatlas    317790 Jun  3 15:24 log.45006595._033407.job.log.tgz.1
[2025-06-03 15:25:14] -rw-------. 1 boincer umatlas      7707 Jun  3 15:24 heartbeat.json
[2025-06-03 15:25:14] -rw-r--r--. 1 boincer umatlas        27 Jun  3 15:25 wrapper_checkpoint.txt
[2025-06-03 15:25:14] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 15:25 boinc_mmap_file
[2025-06-03 15:25:14] -rw-------. 1 boincer umatlas      4425 Jun  3 15:25 pilotlog.txt
[2025-06-03 15:25:14] -rw-------. 1 boincer umatlas    531096 Jun  3 15:25 log.45006595._033407.job.log.1
[2025-06-03 15:25:14] -rw-------. 1 boincer umatlas       357 Jun  3 15:25 output.list
[2025-06-03 15:25:14] -rw-r--r--. 1 boincer umatlas       620 Jun  3 15:25 runtime_log
[2025-06-03 15:25:14] -rw-------. 1 boincer umatlas    870400 Jun  3 15:25 result.tar.gz
[2025-06-03 15:25:14] -rw-------. 1 boincer umatlas       649 Jun  3 15:25 uwsLDmeagg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrHkKDmbmvqWm.diag
[2025-06-03 15:25:14] -rw-r--r--. 1 boincer umatlas      8649 Jun  3 15:25 runtime_log.err
[2025-06-03 15:25:14] -rw-r--r--. 1 boincer umatlas     22339 Jun  3 15:25 stderr.txt
[2025-06-03 15:25:14] HITS file was successfully produced:
[2025-06-03 15:25:14] -rw-------. 1 boincer umatlas 181996381 Jun  3 15:24 shared/HITS.pool.root.1
[2025-06-03 15:25:14]  *** Contents of shared directory: ***
[2025-06-03 15:25:14] total 390632
[2025-06-03 15:25:14] -rw-r--r--. 2 boincer umatlas 216600500 Jun  3 13:53 ATLAS.root_0
[2025-06-03 15:25:14] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:53 start_atlas.sh
[2025-06-03 15:25:14] -rw-r--r--. 2 boincer umatlas    508877 Jun  3 13:53 input.tar.gz
[2025-06-03 15:25:14] -rw-------. 1 boincer umatlas 181996381 Jun  3 15:24 HITS.pool.root.1
[2025-06-03 15:25:14] -rw-------. 1 boincer umatlas    870400 Jun  3 15:25 result.tar.gz
15:25:35 (672145): run_atlas exited; CPU time 38871.628509
15:25:35 (672145): called boinc_finish(0)

</stderr_txt>
]]>

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