Name Jf9LDmS3jg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7AlKDmf1TNTo_0
Workunit 232826303
Created 3 Jun 2025, 16:53:08 UTC
Sent 3 Jun 2025, 17:53:02 UTC
Report deadline 11 Jun 2025, 17:53:02 UTC
Received 9 Jun 2025, 8:04:31 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10856818
Run time 1 hours 56 min 31 sec
CPU time 15 hours 49 min 10 sec
Validate state Valid
Credit 436.99
Device peak FLOPS 29.20 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.80 GB
Peak swap size 3.17 GB
Peak disk usage 958.63 MB

Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:53:23 (37462): wrapper (7.7.26015): starting
13:53:23 (37462): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 13:53:23] Arguments: --nthreads 8
[2025-06-03 13:53:23] Threads: 8
[2025-06-03 13:53:23] Checking for CVMFS
[2025-06-03 13:53:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:53:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:53:24] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:53:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:53:24] 2.12.6.0 1303481 22172 300436 146750 3 197 27347110 32935937 4982 16776704 0 69102632 99.646 72004422 34284 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 13:53:24] CVMFS is ok
[2025-06-03 13:53:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 13:53:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 13:53:24] Further information can be found at the LHC@home message board.
[2025-06-03 13:53:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:53:24] Checking for apptainer binary...
[2025-06-03 13:53:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:53:24] Running /usr/bin/apptainer --version
[2025-06-03 13:53:24] apptainer version 1.4.1-1.el9
[2025-06-03 13:53:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:53:24] c6-6-39-4.aglt2.org
[2025-06-03 13:53:24] apptainer works
[2025-06-03 13:53:24] Set ATHENA_PROC_NUMBER=8
[2025-06-03 13:53:24] Set ATHENA_CORE_NUMBER=8
[2025-06-03 13:53:24] Starting ATLAS job with PandaID=6677784777
[2025-06-03 13:53:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
02:48:44 (851653): wrapper (7.7.26015): starting
02:48:44 (851653): wrapper: running run_atlas (--nthreads 12)
[2025-06-09 02:48:44] Arguments: --nthreads 12
[2025-06-09 02:48:44] Threads: 12
[2025-06-09 02:48:44] This job has been restarted, cleaning up previous attempt
[2025-06-09 02:48:44] Checking for CVMFS
[2025-06-09 02:48:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-09 02:48:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-09 02:48:44] Running cvmfs_config stat atlas.cern.ch
[2025-06-09 02:48:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-09 02:48:44] 2.12.6.0 1303481 30147 347928 146960 0 467 20305493 32935937 13781 16776704 0 93111145 99.648 101770736 34236 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-09 02:48:44] CVMFS is ok
[2025-06-09 02:48:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-09 02:48:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-09 02:48:44] Further information can be found at the LHC@home message board.
[2025-06-09 02:48:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-09 02:48:44] Checking for apptainer binary...
[2025-06-09 02:48:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-09 02:48:44] Running /usr/bin/apptainer --version
[2025-06-09 02:48:44] apptainer version 1.4.1-1.el9
[2025-06-09 02:48:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-09 02:48:44] c6-6-39-4.aglt2.org
[2025-06-09 02:48:44] apptainer works
[2025-06-09 02:48:45] Set ATHENA_PROC_NUMBER=12
[2025-06-09 02:48:45] Set ATHENA_CORE_NUMBER=12
[2025-06-09 02:48:45] Starting ATLAS job with PandaID=6677784777
[2025-06-09 02:48:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-09 02:51:51] Job failed
[2025-06-09 02:51:51] ++ pwd
[2025-06-09 02:51:51] + export RUNTIME_CONFIG_DIR=/tmp/boinchome/slots/2/
[2025-06-09 02:51:51] + RUNTIME_CONFIG_DIR=/tmp/boinchome/slots/2/
[2025-06-09 02:51:51] + mv ATLAS.root_0 EVNT.45006593._001579.pool.root.1
[2025-06-09 02:51:51] mv: &#226;&#128;&#152;ATLAS.root_0&#226;&#128;&#153; and &#226;&#128;&#152;EVNT.45006593._001579.pool.root.1&#226;&#128;&#153; are the same file
[2025-06-09 02:51:51] + tar --strip-components=5 -xvf input.tar.gz
[2025-06-09 02:51:51] + umask 077
[2025-06-09 02:51:51] ++ date +%s
[2025-06-09 02:51:51] + ACCOUNTING_STARTTIME=1749451725
[2025-06-09 02:51:51] + echo 'Detecting resource accounting method available for the job.'
[2025-06-09 02:51:51] Detecting resource accounting method available for the job.
[2025-06-09 02:51:51] + JOB_ACCOUNTING=
[2025-06-09 02:51:51] + command -v arc-job-cgroup
[2025-06-09 02:51:51] + '[' -z '' ']'
[2025-06-09 02:51:51] + GNU_TIME=/usr/bin/time
[2025-06-09 02:51:51] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2025-06-09 02:51:51] Looking for /usr/bin/time tool for accounting measurements
[2025-06-09 02:51:51] + '[' '!' -z /usr/bin/time ']'
[2025-06-09 02:51:51] + /usr/bin/time --version
[2025-06-09 02:51:51] + echo 'GNU time found and will be used for job accounting.'
[2025-06-09 02:51:51] GNU time found and will be used for job accounting.
[2025-06-09 02:51:51] + JOB_ACCOUNTING=gnutime
[2025-06-09 02:51:51] + '[' -z gnutime ']'
[2025-06-09 02:51:51] + export PANDA_JSID=harvester-CERN_central_ACTA
[2025-06-09 02:51:51] + PANDA_JSID=harvester-CERN_central_ACTA
[2025-06-09 02:51:51] + export GTAG=http://aipanda403.cern.ch/data/jobs/2025-06-03/BOINC_MCORE/6677784777.out
[2025-06-09 02:51:51] + GTAG=http://aipanda403.cern.ch/data/jobs/2025-06-03/BOINC_MCORE/6677784777.out
[2025-06-09 02:51:51] + export PILOT_NOKILL=YES
[2025-06-09 02:51:51] + PILOT_NOKILL=YES
[2025-06-09 02:51:51] + export GRID_GLOBAL_JOBID=Jf9LDmS3jg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7AlKDmf1TNTo
[2025-06-09 02:51:51] + GRID_GLOBAL_JOBID=Jf9LDmS3jg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7AlKDmf1TNTo
[2025-06-09 02:51:51] + export GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/Jf9LDmS3jg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7AlKDmf1TNTo
[2025-06-09 02:51:51] + GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/Jf9LDmS3jg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7AlKDmf1TNTo
[2025-06-09 02:51:51] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-06-09 02:51:51] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-06-09 02:51:51] + export GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-06-09 02:51:51] + GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-06-09 02:51:51] ++ pwd
[2025-06-09 02:51:51] + RUNTIME_JOB_DIR=/tmp/boinchome/slots/2
[2025-06-09 02:51:51] + RUNTIME_JOB_STDIN=/dev/null
[2025-06-09 02:51:51] ++ pwd
[2025-06-09 02:51:51] + RUNTIME_JOB_STDOUT=/tmp/boinchome/slots/2/log.45006595._039381.job.log.1
[2025-06-09 02:51:51] ++ pwd
[2025-06-09 02:51:51] + RUNTIME_JOB_STDERR=/tmp/boinchome/slots/2/log.45006595._039381.job.log.1
[2025-06-09 02:51:51] ++ pwd
[2025-06-09 02:51:51] + RUNTIME_JOB_DIAG=/tmp/boinchome/slots/2.diag
[2025-06-09 02:51:51] + '[' '!' -z '' ']'
[2025-06-09 02:51:51] + RUNTIME_LOCAL_SCRATCH_DIR=
[2025-06-09 02:51:51] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2025-06-09 02:51:51] + RUNTIME_FRONTEND_SEES_NODE=
[2025-06-09 02:51:51] + RUNTIME_NODE_SEES_FRONTEND=yes
[2025-06-09 02:51:51] + '[' '!' -z '' ']'
[2025-06-09 02:51:51] + '[' -z yes ']'
[2025-06-09 02:51:51] ++ pwd
[2025-06-09 02:51:51] + RUNTIME_JOB_DIAG=/tmp/boinchome/slots/2/Jf9LDmS3jg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7AlKDmf1TNTo.diag
[2025-06-09 02:51:51] + runtimeenvironments=
[2025-06-09 02:51:51] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-06-09 02:51:51] + RTE_function_0 1
[2025-06-09 02:51:51] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-06-09 02:51:51] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-06-09 02:51:51] + export BOINC_APP=ATLAS
[2025-06-09 02:51:51] + BOINC_APP=ATLAS
[2025-06-09 02:51:51] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-06-09 02:51:51] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-06-09 02:51:51] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-06-09 02:51:51] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-06-09 02:51:51] + '[' -z 1 ']'
[2025-06-09 02:51:51] + '[' 1 == 1 ']'
[2025-06-09 02:51:51] + shift
[2025-06-09 02:51:51] + export ATLAS_LOCAL_AREA=/tmp/boinchome/slots/2/
[2025-06-09 02:51:51] + ATLAS_LOCAL_AREA=/tmp/boinchome/slots/2/
[2025-06-09 02:51:51] + '[' 0 -ne 0 ']'
[2025-06-09 02:51:51] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2025-06-09 02:51:51] + '[' -f /etc/os-release ']'
[2025-06-09 02:51:51] +++ cat /etc/os-release
[2025-06-09 02:51:51] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2025-06-09 02:51:51] +++ NAME='CentOS Linux'
[2025-06-09 02:51:51] +++ VERSION='7 (Core)'
[2025-06-09 02:51:51] +++ ID=centos
[2025-06-09 02:51:51] +++ ID_LIKE='rhel fedora'
[2025-06-09 02:51:51] +++ VERSION_ID=7
[2025-06-09 02:51:51] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2025-06-09 02:51:51] +++ ANSI_COLOR='0;31'
[2025-06-09 02:51:51] +++ CPE_NAME=cpe:/o:centos:centos:7
[2025-06-09 02:51:51] +++ HOME_URL=https://www.centos.org/
[2025-06-09 02:51:51] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2025-06-09 02:51:51] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2025-06-09 02:51:51] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2025-06-09 02:51:51] +++ REDHAT_SUPPORT_PRODUCT=centos
[2025-06-09 02:51:51] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2025-06-09 02:51:51] ++ echo 'CentOS Linux 7 (Core)'
[2025-06-09 02:51:51] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2025-06-09 02:51:51] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2025-06-09 02:51:51] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2025-06-09 02:51:51] + HOME=/tmp/boinchome/slots/2
[2025-06-09 02:51:51] + export HOME
[2025-06-09 02:51:51] + cd /tmp/boinchome/slots/2
[2025-06-09 02:51:51] + '[' '!' -z '' ']'
[2025-06-09 02:51:51] + '[' -z '' ']'
[2025-06-09 02:51:51] ++ /bin/hostname -f
[2025-06-09 02:51:51] + nodename=c6-6-39-4.aglt2.org
[2025-06-09 02:51:51] + echo nodename=c6-6-39-4.aglt2.org
[2025-06-09 02:51:51] + echo Processors=2
[2025-06-09 02:51:51] + echo Nodecount=1
[2025-06-09 02:51:51] + echo Benchmark=HEPSPEC:1.0
[2025-06-09 02:51:51] + executable=./runpilot2-wrapper.sh
[2025-06-09 02:51:51] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2025-06-09 02:51:51] ++ dd if=./runpilot2-wrapper.sh count=1
[2025-06-09 02:51:51] ++ head -n 1
[2025-06-09 02:51:51] ++ tr -d '\0'
[2025-06-09 02:51:51] + line1='#!/bin/bash'
[2025-06-09 02:51:51] ++ echo '#!/bin/bash'
[2025-06-09 02:51:51] ++ sed -n 's/^#! *//p'
[2025-06-09 02:51:51] + shebang=/bin/bash
[2025-06-09 02:51:51] ++ echo /bin/bash
[2025-06-09 02:51:51] ++ awk '{print $1}'
[2025-06-09 02:51:51] + interpreter=/bin/bash
[2025-06-09 02:51:51] + '[' /bin/bash = /usr/bin/env ']'
[2025-06-09 02:51:51] + '[' x/bin/bash = x ']'
[2025-06-09 02:51:51] + type /bin/bash
[2025-06-09 02:51:51] + '[' xgnutime = xgnutime ']'
[2025-06-09 02:51:51] + /usr/bin/time -o /tmp/boinchome/slots/2/Jf9LDmS3jg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7AlKDmf1TNTo.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.10.2.2 -z -t --piloturl local --mute --container
[2025-06-09 02:51:51] + RESULT=2
[2025-06-09 02:51:51] + sed -i -e /nodename=/d /tmp/boinchome/slots/2/Jf9LDmS3jg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7AlKDmf1TNTo.diag
[2025-06-09 02:51:51] ++ grep domain_name init_data.xml
[2025-06-09 02:51:51] ++ awk -F '>' '{print $2}'
[2025-06-09 02:51:51] ++ awk -F '<' '{print $1}'
[2025-06-09 02:51:51] ++ sed -e 's# #_#g'
[2025-06-09 02:51:51] + hostname=c6-6-39-4.aglt2.org
[2025-06-09 02:51:51] ++ grep user_name init_data.xml
[2025-06-09 02:51:51] ++ awk -F '>' '{print $2}'
[2025-06-09 02:51:51] ++ awk -F '<' '{print $1}'
[2025-06-09 02:51:51] ++ sed -e 's# #_#g'
[2025-06-09 02:51:51] + username=AGLT2
[2025-06-09 02:51:51] + nodename=AGLT2@c6-6-39-4.aglt2.org
[2025-06-09 02:51:51] + echo nodename=AGLT2@c6-6-39-4.aglt2.org
[2025-06-09 02:51:51] + '[' -n 12 ']'
[2025-06-09 02:51:51] + sed -i -e s/Processors=1/Processors=12/ /tmp/boinchome/slots/2/Jf9LDmS3jg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7AlKDmf1TNTo.diag
[2025-06-09 02:51:51] + echo exitcode=2
[2025-06-09 02:51:51] + runtimeenvironments=
[2025-06-09 02:51:51] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-06-09 02:51:51] + RTE_function_0 2
[2025-06-09 02:51:51] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-06-09 02:51:51] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-06-09 02:51:51] + export BOINC_APP=ATLAS
[2025-06-09 02:51:51] + BOINC_APP=ATLAS
[2025-06-09 02:51:51] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-06-09 02:51:51] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-06-09 02:51:51] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-06-09 02:51:51] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-06-09 02:51:51] + '[' -z 2 ']'
[2025-06-09 02:51:51] + '[' 2 == 1 ']'
[2025-06-09 02:51:51] + '[' 0 -ne 0 ']'
[2025-06-09 02:51:51] + echo 'zip all output files'
[2025-06-09 02:51:51] + flist='*.diag '
[2025-06-09 02:51:51] + for f in ./heartbeat.json ./output.list ./log.45006595._039381.job.log.1 ./log.45006595._039381.job.log.1 ./gmlog/
[2025-06-09 02:51:51] + '[' -e ./heartbeat.json ']'
[2025-06-09 02:51:51] + flist='*.diag  ./heartbeat.json'
[2025-06-09 02:51:51] + for f in ./heartbeat.json ./output.list ./log.45006595._039381.job.log.1 ./log.45006595._039381.job.log.1 ./gmlog/
[2025-06-09 02:51:51] + '[' -e ./output.list ']'
[2025-06-09 02:51:51] + for f in ./heartbeat.json ./output.list ./log.45006595._039381.job.log.1 ./log.45006595._039381.job.log.1 ./gmlog/
[2025-06-09 02:51:51] + '[' -e ./log.45006595._039381.job.log.1 ']'
[2025-06-09 02:51:51] + flist='*.diag  ./heartbeat.json ./log.45006595._039381.job.log.1'
[2025-06-09 02:51:51] + for f in ./heartbeat.json ./output.list ./log.45006595._039381.job.log.1 ./log.45006595._039381.job.log.1 ./gmlog/
[2025-06-09 02:51:51] + '[' -e ./log.45006595._039381.job.log.1 ']'
[2025-06-09 02:51:51] + flist='*.diag  ./heartbeat.json ./log.45006595._039381.job.log.1 ./log.45006595._039381.job.log.1'
[2025-06-09 02:51:51] + for f in ./heartbeat.json ./output.list ./log.45006595._039381.job.log.1 ./log.45006595._039381.job.log.1 ./gmlog/
[2025-06-09 02:51:51] + '[' -e ./gmlog/ ']'
[2025-06-09 02:51:51] + '[' -f output.list ']'
[2025-06-09 02:51:51] + tar cvf result.tar.gz Jf9LDmS3jg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7AlKDmf1TNTo.diag ./heartbeat.json ./log.45006595._039381.job.log.1 ./log.45006595._039381.job.log.1
[2025-06-09 02:51:51] + '[' xgnutime = xcgroup ']'
[2025-06-09 02:51:51] + '[' -n '' ']'
[2025-06-09 02:51:51] + '[' -n '' ']'
[2025-06-09 02:51:51] ++ date +%s
[2025-06-09 02:51:51] + ACCOUNTING_ENDTIME=1749451911
[2025-06-09 02:51:51] ++ date -d '1970-01-01 UTC 1749451725 seconds' +%Y%m%d%H%M%SZ
[2025-06-09 02:51:51] + echo LRMSStartTime=20250609024845Z
[2025-06-09 02:51:51] ++ date -d '1970-01-01 UTC 1749451911 seconds' +%Y%m%d%H%M%SZ
[2025-06-09 02:51:51] + echo LRMSEndTime=20250609025151Z
[2025-06-09 02:51:51] + echo walltime=186
[2025-06-09 02:51:51] + echo exitcode=2
[2025-06-09 02:51:51] + exit 2
[2025-06-09 02:51:51] ./log.45006595._039381.job.log.1
[2025-06-09 02:51:51] ./runtime_log
[2025-06-09 02:51:51] ./pilot3/pilot/util/lokirealtimelogger.py
[2025-06-09 02:51:51] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2025-06-09 02:51:51] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2025-06-09 02:51:51] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2025-06-09 02:51:51] ./pilot3/pilot/util/loggingsupport.py
[2025-06-09 02:51:51] ./pilot3/pilot/util/realtimelogger.py
[2025-06-09 02:51:51] ./PanDA_Pilot-6677784777/prmon.log
[2025-06-09 02:51:51] ./PanDA_Pilot-6677784777/log.EVNTtoHITS
[2025-06-09 02:51:51] ./PanDA_Pilot-6677784777/PoolFileCatalog.xml
[2025-06-09 02:51:51] ./PanDA_Pilot-6677784777/pilotlog.txt
[2025-06-09 02:51:51] ./pilotlog.txt
[2025-06-09 02:51:51] ./log.45006595._039381.job.log.tgz.1
[2025-06-09 02:51:51] ./runtime_log.err
03:04:25 (902885): wrapper (7.7.26015): starting
03:04:25 (902885): wrapper: running run_atlas (--nthreads 12)
[2025-06-09 03:04:25] Arguments: --nthreads 12
[2025-06-09 03:04:25] Threads: 12
[2025-06-09 03:04:25] This job has been restarted, cleaning up previous attempt
[2025-06-09 03:04:25] Checking for CVMFS
[2025-06-09 03:04:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-09 03:04:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-09 03:04:26] Running cvmfs_config stat atlas.cern.ch
[2025-06-09 03:04:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-09 03:04:26] 2.12.6.0 1303481 30163 345236 146960 0 479 20307589 32935937 10542 16776704 0 93168143 99.648 101770946 34236 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-09 03:04:26] CVMFS is ok
[2025-06-09 03:04:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-09 03:04:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-09 03:04:26] Further information can be found at the LHC@home message board.
[2025-06-09 03:04:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-09 03:04:26] Checking for apptainer binary...
[2025-06-09 03:04:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-09 03:04:26] Running /usr/bin/apptainer --version
[2025-06-09 03:04:26] apptainer version 1.4.1-1.el9
[2025-06-09 03:04:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-09 03:04:26] c6-6-39-4.aglt2.org
[2025-06-09 03:04:26] apptainer works
[2025-06-09 03:04:26] Set ATHENA_PROC_NUMBER=12
[2025-06-09 03:04:26] Set ATHENA_CORE_NUMBER=12
[2025-06-09 03:04:26] Starting ATLAS job with PandaID=6677784777
[2025-06-09 03:04:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-09 03:57:17]  *** The last 200 lines of the pilot log: ***
[2025-06-09 03:57:17]  filetype=log
[2025-06-09 03:57:17]  guid=d84c9fbb-3eba-4ed2-bbb7-2f2d062a0b16
[2025-06-09 03:57:17]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-09 03:57:17]  is_altstaged=None
[2025-06-09 03:57:17]  is_tar=False
[2025-06-09 03:57:17]  lfn=log.45006595._039381.job.log.tgz.1
[2025-06-09 03:57:17]  mtime=0
[2025-06-09 03:57:17]  protocol_id=None
[2025-06-09 03:57:17]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-09 03:57:17]  replicas=None
[2025-06-09 03:57:17]  scope=mc23_13p6TeV
[2025-06-09 03:57:17]  status=None
[2025-06-09 03:57:17]  status_code=0
[2025-06-09 03:57:17]  storage_token=
[2025-06-09 03:57:17]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6677784777/log.45006595._039381.job.log.tgz.1
[2025-06-09 03:57:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0c/6b/log.45006595._039381.job.log.tgz.1
[2025-06-09 03:57:17]  workdir=None
[2025-06-09 03:57:17] ]
[2025-06-09 03:57:17] 2025-06-09 07:56:51,363 | INFO     | transferring file log.45006595._039381.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6677784777/log.45006595._039381.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-09 03:57:17] 2025-06-09 07:56:51,363 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6677784777/log.45006595._039381.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._039381.job
[2025-06-09 03:57:17] 2025-06-09 07:56:51,380 | INFO     | adding to output.list: log.45006595._039381.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0c/6b/log.45006595._039381.job.log.tg
[2025-06-09 03:57:17] 2025-06-09 07:56:51,381 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-09 03:57:17] 2025-06-09 07:56:51,381 | INFO     | summary of transferred files:
[2025-06-09 03:57:17] 2025-06-09 07:56:51,381 | INFO     |  -- lfn=log.45006595._039381.job.log.tgz.1, status_code=0, status=transferred
[2025-06-09 03:57:17] 2025-06-09 07:56:51,382 | INFO     | stage-out finished correctly
[2025-06-09 03:57:17] 2025-06-09 07:56:52,150 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-09 03:57:17] 2025-06-09 07:56:52,201 | INFO     | monitor loop #230: job 0:6677784777 is in state 'finished'
[2025-06-09 03:57:17] 2025-06-09 07:56:52,227 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-09 03:57:17] 2025-06-09 07:56:52,234 | INFO     | job 6677784777 has state=finished
[2025-06-09 03:57:17] 2025-06-09 07:56:52,234 | INFO     | preparing for final server update for job 6677784777 in state='finished'
[2025-06-09 03:57:17] 2025-06-09 07:56:52,234 | INFO     | this job has now completed (state=finished)
[2025-06-09 03:57:17] 2025-06-09 07:56:52,234 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-09 03:57:17] 2025-06-09 07:56:52,235 | INFO     | log transfer has been attempted: DONE
[2025-06-09 03:57:17] 2025-06-09 07:56:52,235 | INFO     | job 6677784777 has finished - writing final server update
[2025-06-09 03:57:17] 2025-06-09 07:56:52,235 | INFO     | total number of processed events: 400 (read)
[2025-06-09 03:57:17] 2025-06-09 07:56:52,251 | INFO     | executing command: lscpu
[2025-06-09 03:57:17] 2025-06-09 07:56:52,322 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-09 03:57:17] 2025-06-09 07:56:54,736 | INFO     | monitor loop #231: job 0:6677784777 is in state 'finished'
[2025-06-09 03:57:17] 2025-06-09 07:56:54,738 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-09 03:57:17] 2025-06-09 07:56:56,109 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-09 03:57:17] 2025-06-09 07:56:56,109 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6677784777/memory_monitor_summary.json (trf name=prmon)
[2025-06-09 03:57:17] 2025-06-09 07:56:56,110 | INFO     | extracted standard info from prmon json
[2025-06-09 03:57:17] 2025-06-09 07:56:56,110 | INFO     | extracted standard memory fields from prmon json
[2025-06-09 03:57:17] 2025-06-09 07:56:56,110 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-09 03:57:17] 2025-06-09 07:56:56,111 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-09 03:57:17] 2025-06-09 07:56:56,111 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-09 03:57:17] 2025-06-09 07:56:56,112 | INFO     | fitting pss+swap vs Time
[2025-06-09 03:57:17] 2025-06-09 07:56:56,112 | INFO     | sum of square deviations: 26400495.0
[2025-06-09 03:57:17] 2025-06-09 07:56:56,113 | INFO     | sum of deviations: -1105054527.9999998
[2025-06-09 03:57:17] 2025-06-09 07:56:56,113 | INFO     | mean x: 1749454318.5
[2025-06-09 03:57:17] 2025-06-09 07:56:56,113 | INFO     | mean y: 2404525.772727273
[2025-06-09 03:57:17] 2025-06-09 07:56:56,113 | INFO     | -- intersect: 73229910911.07265
[2025-06-09 03:57:17] 2025-06-09 07:56:56,113 | INFO     | intersect: 73229910911.07265
[2025-06-09 03:57:17] 2025-06-09 07:56:56,113 | INFO     | chi2: 0.028513282009757782
[2025-06-09 03:57:17] 2025-06-09 07:56:56,113 | INFO     | -- intersect: 73229910911.07265
[2025-06-09 03:57:17] 2025-06-09 07:56:56,113 | INFO     | current memory leak: -41.86 B/s (using 44 data points, chi2=0.03)
[2025-06-09 03:57:17] 2025-06-09 07:56:56,113 | INFO     | ..............................
[2025-06-09 03:57:17] 2025-06-09 07:56:56,114 | INFO     | . Timing measurements:
[2025-06-09 03:57:17] 2025-06-09 07:56:56,114 | INFO     | . get job = 0 s
[2025-06-09 03:57:17] 2025-06-09 07:56:56,114 | INFO     | . initial setup = 0 s
[2025-06-09 03:57:17] 2025-06-09 07:56:56,114 | INFO     | . payload setup = 6 s
[2025-06-09 03:57:17] 2025-06-09 07:56:56,114 | INFO     | . stage-in = 0 s
[2025-06-09 03:57:17] 2025-06-09 07:56:56,114 | INFO     | . payload execution = 3108 s
[2025-06-09 03:57:17] 2025-06-09 07:56:56,114 | INFO     | . stage-out = 0 s
[2025-06-09 03:57:17] 2025-06-09 07:56:56,114 | INFO     | . log creation = 0 s
[2025-06-09 03:57:17] 2025-06-09 07:56:56,114 | INFO     | ..............................
[2025-06-09 03:57:17] 2025-06-09 07:56:56,499 | INFO     | 
[2025-06-09 03:57:17] 2025-06-09 07:56:56,499 | INFO     | job summary report
[2025-06-09 03:57:17] 2025-06-09 07:56:56,499 | INFO     | --------------------------------------------------
[2025-06-09 03:57:17] 2025-06-09 07:56:56,499 | INFO     | PanDA job id: 6677784777
[2025-06-09 03:57:17] 2025-06-09 07:56:56,499 | INFO     | task id: 45006595
[2025-06-09 03:57:17] 2025-06-09 07:56:56,499 | INFO     | errors: (none)
[2025-06-09 03:57:17] 2025-06-09 07:56:56,499 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-09 03:57:17] 2025-06-09 07:56:56,499 | INFO     | pilot state: finished 
[2025-06-09 03:57:17] 2025-06-09 07:56:56,499 | INFO     | transexitcode: 0
[2025-06-09 03:57:17] 2025-06-09 07:56:56,499 | INFO     | exeerrorcode: 0
[2025-06-09 03:57:17] 2025-06-09 07:56:56,500 | INFO     | exeerrordiag: 
[2025-06-09 03:57:17] 2025-06-09 07:56:56,500 | INFO     | exitcode: 0
[2025-06-09 03:57:17] 2025-06-09 07:56:56,500 | INFO     | exitmsg: OK
[2025-06-09 03:57:17] 2025-06-09 07:56:56,500 | INFO     | cpuconsumptiontime: 31788 s
[2025-06-09 03:57:17] 2025-06-09 07:56:56,500 | INFO     | nevents: 400
[2025-06-09 03:57:17] 2025-06-09 07:56:56,500 | INFO     | neventsw: 0
[2025-06-09 03:57:17] 2025-06-09 07:56:56,500 | INFO     | pid: 914341
[2025-06-09 03:57:17] 2025-06-09 07:56:56,500 | INFO     | pgrp: 914341
[2025-06-09 03:57:17] 2025-06-09 07:56:56,500 | INFO     | corecount: 12
[2025-06-09 03:57:17] 2025-06-09 07:56:56,500 | INFO     | event service: False
[2025-06-09 03:57:17] 2025-06-09 07:56:56,500 | INFO     | sizes: {0: 2397342, 4: 2397548, 11: 2397576, 3118: 2422993, 3119: 2422992, 3120: 2432173, 3124: 2432287}
[2025-06-09 03:57:17] 2025-06-09 07:56:56,500 | INFO     | --------------------------------------------------
[2025-06-09 03:57:17] 2025-06-09 07:56:56,500 | INFO     | 
[2025-06-09 03:57:17] 2025-06-09 07:56:56,500 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-09 03:57:17] 2025-06-09 07:56:56,518 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-09 03:57:17] 2025-06-09 07:56:56,518 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-09 03:57:17] 2025-06-09 07:56:56,519 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-09 03:57:17] 2025-06-09 07:56:56,519 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-09 03:57:17] 2025-06-09 07:56:56,519 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-09 03:57:17] 2025-06-09 07:56:56,519 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-09 03:57:17] 2025-06-09 07:56:56,519 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-09 03:57:17] 2025-06-09 07:56:56,519 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-09 03:57:17] 2025-06-09 07:56:56,519 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-09 03:57:17] 2025-06-09 07:56:56,519 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-09 03:57:17] 2025-06-09 07:56:56,519 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-09 03:57:17] 2025-06-09 07:56:56,519 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-09 03:57:17] 2025-06-09 07:56:56,519 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-09 03:57:17] 2025-06-09 07:56:56,519 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-09 03:57:17] 2025-06-09 07:56:56,519 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-09 03:57:17] 2025-06-09 07:56:56,519 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-09 03:57:17] 2025-06-09 07:56:56,520 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-09 03:57:17] 2025-06-09 07:56:56,520 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-09 03:57:17] 2025-06-09 07:56:56,520 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-09 03:57:17] 2025-06-09 07:56:56,520 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-09 03:57:17] 2025-06-09 07:56:56,520 | INFO     | job 6677784777 has completed (purged errors)
[2025-06-09 03:57:17] 2025-06-09 07:56:56,520 | INFO     | overall cleanup function is called
[2025-06-09 03:57:17] 2025-06-09 07:56:57,528 | INFO     | --- collectZombieJob: --- 10, [914341]
[2025-06-09 03:57:17] 2025-06-09 07:56:57,528 | INFO     | zombie collector waiting for pid 914341
[2025-06-09 03:57:17] 2025-06-09 07:56:57,528 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-09 03:57:17] 2025-06-09 07:56:57,528 | INFO     | collected zombie processes
[2025-06-09 03:57:17] 2025-06-09 07:56:57,528 | INFO     | will attempt to kill all subprocesses of pid=914341
[2025-06-09 03:57:17] 2025-06-09 07:56:57,701 | INFO     | process IDs to be killed: [914341] (in reverse order)
[2025-06-09 03:57:17] 2025-06-09 07:56:57,766 | WARNING  | found no corresponding commands to process id(s)
[2025-06-09 03:57:17] 2025-06-09 07:56:57,766 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-09 03:57:17] 2025-06-09 07:56:57,774 | INFO     | did not find any defunct processes belonging to 914341
[2025-06-09 03:57:17] 2025-06-09 07:56:57,785 | INFO     | did not find any defunct processes belonging to 914341
[2025-06-09 03:57:17] 2025-06-09 07:56:57,785 | INFO     | ready for new job
[2025-06-09 03:57:17] 2025-06-09 07:56:57,785 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-09 03:57:17] 2025-06-09 07:56:57,787 | INFO     | **************************************
[2025-06-09 03:57:17] 2025-06-09 07:56:57,787 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-09 03:57:17] 2025-06-09 07:56:57,787 | INFO     | **************************************
[2025-06-09 03:57:17] 2025-06-09 07:56:57,787 | INFO     | 
[2025-06-09 03:57:17] 2025-06-09 07:56:57,803 | INFO     | architecture information:
[2025-06-09 03:57:17] 2025-06-09 07:56:57,803 | INFO     | executing command: cat /etc/os-release
[2025-06-09 03:57:17] 2025-06-09 07:56:57,818 | INFO     | cat /etc/os-release:
[2025-06-09 03:57:17] NAME="CentOS Linux"
[2025-06-09 03:57:17] VERSION="7 (Core)"
[2025-06-09 03:57:17] ID="centos"
[2025-06-09 03:57:17] ID_LIKE="rhel fedora"
[2025-06-09 03:57:17] VERSION_ID="7"
[2025-06-09 03:57:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-09 03:57:17] ANSI_COLOR="0;31"
[2025-06-09 03:57:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-09 03:57:17] HOME_URL="https://www.centos.org/"
[2025-06-09 03:57:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-09 03:57:17] 
[2025-06-09 03:57:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-09 03:57:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-09 03:57:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-09 03:57:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-09 03:57:17] 
[2025-06-09 03:57:17] 2025-06-09 07:56:57,818 | INFO     | **************************************
[2025-06-09 03:57:17] 2025-06-09 07:56:58,321 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-09 03:57:17] 2025-06-09 07:56:58,333 | INFO     | sufficient remaining disk space (74744594432 B)
[2025-06-09 03:57:17] 2025-06-09 07:56:58,333 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-09 03:57:17] 2025-06-09 07:56:58,333 | INFO     | current server update state: UPDATING_FINAL
[2025-06-09 03:57:17] 2025-06-09 07:56:58,333 | INFO     | update_server=False
[2025-06-09 03:57:17] 2025-06-09 07:56:58,333 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-09 03:57:17] 2025-06-09 07:56:58,333 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-09 03:57:17] 2025-06-09 07:56:58,334 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-09 03:57:17] 2025-06-09 07:56:58,334 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-09 03:57:17] 2025-06-09 07:56:58,334 | INFO     | found 0 job(s) in 20 queues
[2025-06-09 03:57:17] 2025-06-09 07:56:58,334 | INFO     | aborting loop
[2025-06-09 03:57:17] 2025-06-09 07:56:58,335 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-09 03:57:17] 2025-06-09 07:56:58,335 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-09 03:57:17] 2025-06-09 07:56:58,934 | INFO     | all data control threads have been joined
[2025-06-09 03:57:17] 2025-06-09 07:56:59,049 | INFO     | all job control threads have been joined
[2025-06-09 03:57:17] 2025-06-09 07:56:59,120 | INFO     | all payload control threads have been joined
[2025-06-09 03:57:17] 2025-06-09 07:56:59,338 | INFO     | [job] retrieve thread has finished
[2025-06-09 03:57:17] 2025-06-09 07:56:59,340 | INFO     | [job] job monitor thread has finished
[2025-06-09 03:57:17] 2025-06-09 07:56:59,482 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-09 03:57:17] 2025-06-09 07:56:59,623 | INFO     | [data] copytool_in thread has finished
[2025-06-09 03:57:17] 2025-06-09 07:56:59,674 | INFO     | [payload] validate_post thread has finished
[2025-06-09 03:57:17] 2025-06-09 07:56:59,856 | INFO     | [job] validate thread has finished
[2025-06-09 03:57:17] 2025-06-09 07:56:59,940 | INFO     | [data] control thread has finished
[2025-06-09 03:57:17] 2025-06-09 07:57:00,054 | INFO     | [job] control thread has finished
[2025-06-09 03:57:17] 2025-06-09 07:57:00,125 | INFO     | [payload] control thread has finished
[2025-06-09 03:57:17] 2025-06-09 07:57:00,142 | INFO     | [job] create_data_payload thread has finished
[2025-06-09 03:57:17] 2025-06-09 07:57:00,143 | INFO     | [payload] execute_payloads thread has finished
[2025-06-09 03:57:17] 2025-06-09 07:57:00,217 | INFO     | [payload] validate_pre thread has finished
[2025-06-09 03:57:17] 2025-06-09 07:57:00,308 | INFO     | [payload] failed_post thread has finished
[2025-06-09 03:57:17] 2025-06-09 07:57:01,206 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-09 03:57:17] 2025-06-09 07:57:01,482 | INFO     | [data] copytool_out thread has finished
[2025-06-09 03:57:17] 2025-06-09 07:57:02,211 | INFO     | [job] queue monitor thread has finished
[2025-06-09 03:57:17] 2025-06-09 07:57:02,340 | INFO     | [data] queue_monitor thread has finished
[2025-06-09 03:57:17] 2025-06-09 07:57:09,218 | INFO     | job.realtimelogging is not enabled
[2025-06-09 03:57:17] 2025-06-09 07:57:10,223 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-09 03:57:17] 2025-06-09 07:57:11,681 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139783397066560)>', '<ExcThread(monitor, started 139782915086080)>']
[2025-06-09 03:57:17] 2025-06-09 07:57:12,407 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-09 03:57:17] 2025-06-09 07:57:12,407 | INFO     | [monitor] control thread has ended
[2025-06-09 03:57:17] 2025-06-09 07:57:16,706 | INFO     | all workflow threads have been joined
[2025-06-09 03:57:17] 2025-06-09 07:57:16,706 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-09 03:57:17] 2025-06-09 07:57:16,706 | INFO     | traces error code: 0
[2025-06-09 03:57:17] 2025-06-09 07:57:16,706 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-09 03:57:17] 2025-06-09 07:57:16,851 [wrapper] ==== pilot stdout END ====
[2025-06-09 03:57:17] 2025-06-09 07:57:16,855 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-09 03:57:17] 2025-06-09 07:57:16,860 [wrapper] pilotpid: 906843
[2025-06-09 03:57:17] 2025-06-09 07:57:16,865 [wrapper] Pilot exit status: 0
[2025-06-09 03:57:17] 2025-06-09 07:57:16,875 [wrapper] pandaids: 6677784777 6677784777 6677784777
[2025-06-09 03:57:17] 2025-06-09 07:57:16,937 [wrapper] cleanup supervisor_pilot 1155353 906844
[2025-06-09 03:57:17] 2025-06-09 07:57:16,940 [wrapper] Test setup, not cleaning
[2025-06-09 03:57:17] 2025-06-09 07:57:16,943 [wrapper] apfmon messages muted
[2025-06-09 03:57:17] 2025-06-09 07:57:16,946 [wrapper] ==== wrapper stdout END ====
[2025-06-09 03:57:17] 2025-06-09 07:57:16,948 [wrapper] ==== wrapper stderr END ====
[2025-06-09 03:57:17]  *** Error codes and diagnostics ***
[2025-06-09 03:57:17]     "exeErrorCode": 0,
[2025-06-09 03:57:17]     "exeErrorDiag": "",
[2025-06-09 03:57:17]     "pilotErrorCode": 0,
[2025-06-09 03:57:17]     "pilotErrorDiag": "",
[2025-06-09 03:57:17]  *** Listing of results directory ***
[2025-06-09 03:57:17] total 596404
[2025-06-09 03:57:17] drwx------. 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-06-09 03:57:17] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 12:42 pilot3.tar.gz
[2025-06-09 03:57:17] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 12:51 queuedata.json
[2025-06-09 03:57:17] -rwx------. 1 boincer umatlas     37140 Jun  3 12:52 runpilot2-wrapper.sh
[2025-06-09 03:57:17] -rw-r--r--. 1 boincer umatlas       100 Jun  3 13:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-09 03:57:17] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 13:53 run_atlas
[2025-06-09 03:57:17] -rw-r--r--. 1 boincer umatlas       105 Jun  3 13:53 job.xml
[2025-06-09 03:57:17] -rw-r--r--. 3 boincer umatlas 215340992 Jun  3 13:53 EVNT.45006593._001579.pool.root.1
[2025-06-09 03:57:17] -rw-r--r--. 3 boincer umatlas 215340992 Jun  3 13:53 ATLAS.root_0
[2025-06-09 03:57:17] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:53 start_atlas.sh
[2025-06-09 03:57:17] -rw-r--r--. 2 boincer umatlas    508880 Jun  3 13:53 input.tar.gz
[2025-06-09 03:57:17] -rw-r--r--. 1 boincer umatlas         0 Jun  3 13:53 boinc_lockfile
[2025-06-09 03:57:17] -rw-------. 1 boincer umatlas         0 Jun  9 02:48 wrapper_sigint_855556
[2025-06-09 03:57:17] -rw-------. 1 boincer umatlas   1598969 Jun  9 02:48 agis_ddmendpoints.agis.ALL.json
[2025-06-09 03:57:17] -rw-------. 1 boincer umatlas         0 Jun  9 02:51 wrapper_sigkill_855556
[2025-06-09 03:57:17] drwxrwx--x. 2 boincer umatlas      4096 Jun  9 02:51 shared
[2025-06-09 03:57:17] -rw-r--r--. 1 boincer umatlas      2525 Jun  9 03:04 pandaJob.out
[2025-06-09 03:57:17] -rw-------. 1 boincer umatlas    985907 Jun  9 03:04 agis_schedconf.cvmfs.json
[2025-06-09 03:57:17] -rw-------. 1 boincer umatlas 174801037 Jun  9 03:56 HITS.45006595._039381.pool.root.1
[2025-06-09 03:57:17] -rw-r--r--. 1 boincer umatlas       530 Jun  9 03:56 boinc_task_state.xml
[2025-06-09 03:57:17] -rw-------. 1 boincer umatlas        99 Jun  9 03:56 pilot_heartbeat.json
[2025-06-09 03:57:17] -rw-r--r--. 1 boincer umatlas      6841 Jun  9 03:56 init_data.xml
[2025-06-09 03:57:17] -rw-r--r--. 1 boincer umatlas      8192 Jun  9 03:56 boinc_mmap_file
[2025-06-09 03:57:17] -rw-r--r--. 1 boincer umatlas        27 Jun  9 03:56 wrapper_checkpoint.txt
[2025-06-09 03:57:17] -rw-------. 1 boincer umatlas      1050 Jun  9 03:56 memory_monitor_summary.json
[2025-06-09 03:57:17] -rw-------. 1 boincer umatlas    360975 Jun  9 03:56 log.45006595._039381.job.log.tgz.1
[2025-06-09 03:57:17] -rw-------. 1 boincer umatlas      7742 Jun  9 03:56 heartbeat.json
[2025-06-09 03:57:17] -rw-------. 1 boincer umatlas      4548 Jun  9 03:57 pilotlog.txt
[2025-06-09 03:57:17] -rw-------. 1 boincer umatlas    323877 Jun  9 03:57 log.45006595._039381.job.log.1
[2025-06-09 03:57:17] -rw-------. 1 boincer umatlas       357 Jun  9 03:57 output.list
[2025-06-09 03:57:17] -rw-r--r--. 1 boincer umatlas       620 Jun  9 03:57 runtime_log
[2025-06-09 03:57:17] -rw-r--r--. 2 boincer umatlas    706560 Jun  9 03:57 result.tar.gz
[2025-06-09 03:57:17] -rw-r--r--. 1 boincer umatlas      8751 Jun  9 03:57 runtime_log.err
[2025-06-09 03:57:17] -rw-------. 1 boincer umatlas      1879 Jun  9 03:57 Jf9LDmS3jg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7AlKDmf1TNTo.diag
[2025-06-09 03:57:17] -rw-r--r--. 1 boincer umatlas     38568 Jun  9 03:57 stderr.txt
[2025-06-09 03:57:17] HITS file was successfully produced:
[2025-06-09 03:57:17] -rw-------. 1 boincer umatlas 174801037 Jun  9 03:56 shared/HITS.pool.root.1
[2025-06-09 03:57:17]  *** Contents of shared directory: ***
[2025-06-09 03:57:17] total 382220
[2025-06-09 03:57:17] -rw-r--r--. 3 boincer umatlas 215340992 Jun  3 13:53 ATLAS.root_0
[2025-06-09 03:57:17] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:53 start_atlas.sh
[2025-06-09 03:57:17] -rw-r--r--. 2 boincer umatlas    508880 Jun  3 13:53 input.tar.gz
[2025-06-09 03:57:17] -rw-------. 1 boincer umatlas 174801037 Jun  9 03:56 HITS.pool.root.1
[2025-06-09 03:57:17] -rw-r--r--. 2 boincer umatlas    706560 Jun  9 03:57 result.tar.gz
03:57:18 (902885): run_atlas exited; CPU time 31829.648090
03:57:18 (902885): called boinc_finish(0)

</stderr_txt>
]]>


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