Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:52:46 (649734): wrapper (7.7.26015): starting
13:52:46 (649734): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 13:52:46] Arguments: --nthreads 8
[2025-06-03 13:52:46] Threads: 8
[2025-06-03 13:52:46] Checking for CVMFS
[2025-06-03 13:52:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:52:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:52:46] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:52:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:52:47] 2.12.6.0 9880 221 66216 146750 2 56 18917478 32935936 2947 16776704 0 1072026 99.998 76612 40535 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 13:52:47] CVMFS is ok
[2025-06-03 13:52:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 13:52:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 13:52:47] Further information can be found at the LHC@home message board.
[2025-06-03 13:52:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:52:47] Checking for apptainer binary...
[2025-06-03 13:52:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:52:47] Running /usr/bin/apptainer --version
[2025-06-03 13:52:47] apptainer version 1.4.1-1.el9
[2025-06-03 13:52:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:52:47] c-8-39.aglt2.org
[2025-06-03 13:52:47] apptainer works
[2025-06-03 13:52:47] Set ATHENA_PROC_NUMBER=8
[2025-06-03 13:52:47] Set ATHENA_CORE_NUMBER=8
[2025-06-03 13:52:47] Starting ATLAS job with PandaID=6677636296
[2025-06-03 13:52:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 15:22:25]  *** The last 200 lines of the pilot log: ***
[2025-06-03 15:22:25]  guid=2b029c30-efeb-4bf0-844c-4b7c005f6eeb
[2025-06-03 15:22:25]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 15:22:25]  is_altstaged=None
[2025-06-03 15:22:25]  is_tar=False
[2025-06-03 15:22:25]  lfn=log.45006595._034395.job.log.tgz.1
[2025-06-03 15:22:25]  mtime=0
[2025-06-03 15:22:25]  protocol_id=None
[2025-06-03 15:22:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 15:22:25]  replicas=None
[2025-06-03 15:22:25]  scope=mc23_13p6TeV
[2025-06-03 15:22:25]  status=None
[2025-06-03 15:22:25]  status_code=0
[2025-06-03 15:22:25]  storage_token=
[2025-06-03 15:22:25]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677636296/log.45006595._034395.job.log.tgz.1
[2025-06-03 15:22:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/05/fe/log.45006595._034395.job.log.tgz.1
[2025-06-03 15:22:25]  workdir=None
[2025-06-03 15:22:25] ]
[2025-06-03 15:22:25] 2025-06-03 19:21:58,481 | INFO     | transferring file log.45006595._034395.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677636296/log.45006595._034395.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 15:22:25] 2025-06-03 19:21:58,482 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677636296/log.45006595._034395.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._034395.job
[2025-06-03 15:22:25] 2025-06-03 19:21:58,498 | INFO     | adding to output.list: log.45006595._034395.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/05/fe/log.45006595._034395.job.log.tg
[2025-06-03 15:22:25] 2025-06-03 19:21:58,499 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 15:22:25] 2025-06-03 19:21:58,499 | INFO     | summary of transferred files:
[2025-06-03 15:22:25] 2025-06-03 19:21:58,500 | INFO     |  -- lfn=log.45006595._034395.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 15:22:25] 2025-06-03 19:21:58,500 | INFO     | stage-out finished correctly
[2025-06-03 15:22:25] 2025-06-03 19:21:58,609 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 15:22:25] 2025-06-03 19:21:59,203 | INFO     | monitor loop #397: job 0:6677636296 is in state 'finished'
[2025-06-03 15:22:25] 2025-06-03 19:21:59,225 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 15:22:25] 2025-06-03 19:22:01,408 | INFO     | job 6677636296 has state=finished
[2025-06-03 15:22:25] 2025-06-03 19:22:01,408 | INFO     | preparing for final server update for job 6677636296 in state='finished'
[2025-06-03 15:22:25] 2025-06-03 19:22:01,409 | INFO     | this job has now completed (state=finished)
[2025-06-03 15:22:25] 2025-06-03 19:22:01,409 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 15:22:25] 2025-06-03 19:22:01,409 | INFO     | log transfer has been attempted: DONE
[2025-06-03 15:22:25] 2025-06-03 19:22:01,409 | INFO     | job 6677636296 has finished - writing final server update
[2025-06-03 15:22:25] 2025-06-03 19:22:01,410 | INFO     | total number of processed events: 400 (read)
[2025-06-03 15:22:25] 2025-06-03 19:22:01,425 | INFO     | executing command: lscpu
[2025-06-03 15:22:25] 2025-06-03 19:22:01,498 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 15:22:25] 2025-06-03 19:22:01,728 | INFO     | monitor loop #398: job 0:6677636296 is in state 'finished'
[2025-06-03 15:22:25] 2025-06-03 19:22:01,728 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 15:22:25] 2025-06-03 19:22:04,231 | INFO     | monitor loop #399: job 0:6677636296 is in state 'finished'
[2025-06-03 15:22:25] 2025-06-03 19:22:04,251 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 15:22:25] 2025-06-03 19:22:05,116 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 15:22:25] 2025-06-03 19:22:05,117 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677636296/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 15:22:25] 2025-06-03 19:22:05,118 | INFO     | extracted standard info from prmon json
[2025-06-03 15:22:25] 2025-06-03 19:22:05,118 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 15:22:25] 2025-06-03 19:22:05,119 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 15:22:25] 2025-06-03 19:22:05,119 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 15:22:25] 2025-06-03 19:22:05,119 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 15:22:25] 2025-06-03 19:22:05,122 | INFO     | fitting pss+swap vs Time
[2025-06-03 15:22:25] 2025-06-03 19:22:05,122 | INFO     | sum of square deviations: 164765880.0
[2025-06-03 15:22:25] 2025-06-03 19:22:05,122 | INFO     | sum of deviations: 7030163318.999999
[2025-06-03 15:22:25] 2025-06-03 19:22:05,123 | INFO     | mean x: 1748975943.0
[2025-06-03 15:22:25] 2025-06-03 19:22:05,123 | INFO     | mean y: 2046203.3456790124
[2025-06-03 15:22:25] 2025-06-03 19:22:05,123 | INFO     | -- intersect: -74622545491.80403
[2025-06-03 15:22:25] 2025-06-03 19:22:05,123 | INFO     | intersect: -74622545491.80403
[2025-06-03 15:22:25] 2025-06-03 19:22:05,123 | INFO     | chi2: 0.8503418984997358
[2025-06-03 15:22:25] 2025-06-03 19:22:05,124 | INFO     | -- intersect: -74622545491.80403
[2025-06-03 15:22:25] 2025-06-03 19:22:05,124 | INFO     | current memory leak: 42.67 B/s (using 81 data points, chi2=0.85)
[2025-06-03 15:22:25] 2025-06-03 19:22:05,124 | INFO     | ..............................
[2025-06-03 15:22:25] 2025-06-03 19:22:05,124 | INFO     | . Timing measurements:
[2025-06-03 15:22:25] 2025-06-03 19:22:05,125 | INFO     | . get job = 0 s
[2025-06-03 15:22:25] 2025-06-03 19:22:05,125 | INFO     | . initial setup = 2 s
[2025-06-03 15:22:25] 2025-06-03 19:22:05,125 | INFO     | . payload setup = 4 s
[2025-06-03 15:22:25] 2025-06-03 19:22:05,125 | INFO     | . stage-in = 0 s
[2025-06-03 15:22:25] 2025-06-03 19:22:05,125 | INFO     | . payload execution = 5318 s
[2025-06-03 15:22:25] 2025-06-03 19:22:05,125 | INFO     | . stage-out = 0 s
[2025-06-03 15:22:25] 2025-06-03 19:22:05,125 | INFO     | . log creation = 0 s
[2025-06-03 15:22:25] 2025-06-03 19:22:05,125 | INFO     | ..............................
[2025-06-03 15:22:25] 2025-06-03 19:22:05,236 | INFO     | 
[2025-06-03 15:22:25] 2025-06-03 19:22:05,236 | INFO     | job summary report
[2025-06-03 15:22:25] 2025-06-03 19:22:05,236 | INFO     | --------------------------------------------------
[2025-06-03 15:22:25] 2025-06-03 19:22:05,236 | INFO     | PanDA job id: 6677636296
[2025-06-03 15:22:25] 2025-06-03 19:22:05,237 | INFO     | task id: 45006595
[2025-06-03 15:22:25] 2025-06-03 19:22:05,237 | INFO     | errors: (none)
[2025-06-03 15:22:25] 2025-06-03 19:22:05,237 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 15:22:25] 2025-06-03 19:22:05,237 | INFO     | pilot state: finished 
[2025-06-03 15:22:25] 2025-06-03 19:22:05,237 | INFO     | transexitcode: 0
[2025-06-03 15:22:25] 2025-06-03 19:22:05,237 | INFO     | exeerrorcode: 0
[2025-06-03 15:22:25] 2025-06-03 19:22:05,237 | INFO     | exeerrordiag: 
[2025-06-03 15:22:25] 2025-06-03 19:22:05,238 | INFO     | exitcode: 0
[2025-06-03 15:22:25] 2025-06-03 19:22:05,238 | INFO     | exitmsg: OK
[2025-06-03 15:22:25] 2025-06-03 19:22:05,238 | INFO     | cpuconsumptiontime: 37218 s
[2025-06-03 15:22:25] 2025-06-03 19:22:05,238 | INFO     | nevents: 400
[2025-06-03 15:22:25] 2025-06-03 19:22:05,238 | INFO     | neventsw: 0
[2025-06-03 15:22:25] 2025-06-03 19:22:05,238 | INFO     | pid: 664138
[2025-06-03 15:22:25] 2025-06-03 19:22:05,238 | INFO     | pgrp: 664138
[2025-06-03 15:22:25] 2025-06-03 19:22:05,238 | INFO     | corecount: 8
[2025-06-03 15:22:25] 2025-06-03 19:22:05,238 | INFO     | event service: False
[2025-06-03 15:22:25] 2025-06-03 19:22:05,239 | INFO     | sizes: {0: 2405184, 3: 2405390, 11: 2405418, 5326: 2431850, 5328: 2440791, 5329: 2440847, 5335: 2441145}
[2025-06-03 15:22:25] 2025-06-03 19:22:05,239 | INFO     | --------------------------------------------------
[2025-06-03 15:22:25] 2025-06-03 19:22:05,239 | INFO     | 
[2025-06-03 15:22:25] 2025-06-03 19:22:05,239 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 15:22:25] 2025-06-03 19:22:05,257 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 15:22:25] 2025-06-03 19:22:05,257 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 15:22:25] 2025-06-03 19:22:05,257 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 15:22:25] 2025-06-03 19:22:05,257 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 15:22:25] 2025-06-03 19:22:05,258 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 15:22:25] 2025-06-03 19:22:05,258 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 15:22:25] 2025-06-03 19:22:05,258 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 15:22:25] 2025-06-03 19:22:05,258 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 15:22:25] 2025-06-03 19:22:05,258 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 15:22:25] 2025-06-03 19:22:05,258 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 15:22:25] 2025-06-03 19:22:05,258 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 15:22:25] 2025-06-03 19:22:05,258 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 15:22:25] 2025-06-03 19:22:05,259 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 15:22:25] 2025-06-03 19:22:05,259 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 15:22:25] 2025-06-03 19:22:05,259 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 15:22:25] 2025-06-03 19:22:05,259 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 15:22:25] 2025-06-03 19:22:05,259 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 15:22:25] 2025-06-03 19:22:05,259 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 15:22:25] 2025-06-03 19:22:05,259 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 15:22:25] 2025-06-03 19:22:05,260 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 15:22:25] 2025-06-03 19:22:05,260 | INFO     | job 6677636296 has completed (purged errors)
[2025-06-03 15:22:25] 2025-06-03 19:22:05,260 | INFO     | overall cleanup function is called
[2025-06-03 15:22:25] 2025-06-03 19:22:06,268 | INFO     | --- collectZombieJob: --- 10, [664138]
[2025-06-03 15:22:25] 2025-06-03 19:22:06,268 | INFO     | zombie collector waiting for pid 664138
[2025-06-03 15:22:25] 2025-06-03 19:22:06,268 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 15:22:25] 2025-06-03 19:22:06,268 | INFO     | collected zombie processes
[2025-06-03 15:22:25] 2025-06-03 19:22:06,269 | INFO     | will attempt to kill all subprocesses of pid=664138
[2025-06-03 15:22:25] 2025-06-03 19:22:06,571 | INFO     | process IDs to be killed: [664138] (in reverse order)
[2025-06-03 15:22:25] 2025-06-03 19:22:06,647 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 15:22:25] 2025-06-03 19:22:06,647 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 15:22:25] 2025-06-03 19:22:06,655 | INFO     | did not find any defunct processes belonging to 664138
[2025-06-03 15:22:25] 2025-06-03 19:22:06,662 | INFO     | did not find any defunct processes belonging to 664138
[2025-06-03 15:22:25] 2025-06-03 19:22:06,663 | INFO     | ready for new job
[2025-06-03 15:22:25] 2025-06-03 19:22:06,663 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 15:22:25] 2025-06-03 19:22:06,665 | INFO     | **************************************
[2025-06-03 15:22:25] 2025-06-03 19:22:06,665 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 15:22:25] 2025-06-03 19:22:06,665 | INFO     | **************************************
[2025-06-03 15:22:25] 2025-06-03 19:22:06,665 | INFO     | 
[2025-06-03 15:22:25] 2025-06-03 19:22:06,679 | INFO     | architecture information:
[2025-06-03 15:22:25] 2025-06-03 19:22:06,680 | INFO     | executing command: cat /etc/os-release
[2025-06-03 15:22:25] 2025-06-03 19:22:06,691 | INFO     | cat /etc/os-release:
[2025-06-03 15:22:25] NAME="CentOS Linux"
[2025-06-03 15:22:25] VERSION="7 (Core)"
[2025-06-03 15:22:25] ID="centos"
[2025-06-03 15:22:25] ID_LIKE="rhel fedora"
[2025-06-03 15:22:25] VERSION_ID="7"
[2025-06-03 15:22:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 15:22:25] ANSI_COLOR="0;31"
[2025-06-03 15:22:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 15:22:25] HOME_URL="https://www.centos.org/"
[2025-06-03 15:22:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 15:22:25] 
[2025-06-03 15:22:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 15:22:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 15:22:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 15:22:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 15:22:25] 
[2025-06-03 15:22:25] 2025-06-03 19:22:06,691 | INFO     | **************************************
[2025-06-03 15:22:25] 2025-06-03 19:22:07,194 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 15:22:25] 2025-06-03 19:22:07,209 | INFO     | sufficient remaining disk space (73700212736 B)
[2025-06-03 15:22:25] 2025-06-03 19:22:07,209 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 15:22:25] 2025-06-03 19:22:07,209 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 15:22:25] 2025-06-03 19:22:07,209 | INFO     | update_server=False
[2025-06-03 15:22:25] 2025-06-03 19:22:07,210 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 15:22:25] 2025-06-03 19:22:07,210 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:22:25] 2025-06-03 19:22:07,210 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 15:22:25] 2025-06-03 19:22:07,221 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 15:22:25] 2025-06-03 19:22:07,221 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 15:22:25] 2025-06-03 19:22:07,221 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 15:22:25] 2025-06-03 19:22:07,300 | INFO     | all payload control threads have been joined
[2025-06-03 15:22:25] 2025-06-03 19:22:07,387 | INFO     | all data control threads have been joined
[2025-06-03 15:22:25] 2025-06-03 19:22:07,755 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 15:22:25] 2025-06-03 19:22:07,755 | INFO     | aborting loop
[2025-06-03 15:22:25] 2025-06-03 19:22:08,215 | INFO     | [job] retrieve thread has finished
[2025-06-03 15:22:25] 2025-06-03 19:22:08,216 | INFO     | [job] queue monitor thread has finished
[2025-06-03 15:22:25] 2025-06-03 19:22:08,305 | INFO     | [payload] control thread has finished
[2025-06-03 15:22:25] 2025-06-03 19:22:08,312 | INFO     | all job control threads have been joined
[2025-06-03 15:22:25] 2025-06-03 19:22:08,392 | INFO     | [data] control thread has finished
[2025-06-03 15:22:25] 2025-06-03 19:22:08,531 | INFO     | [payload] validate_post thread has finished
[2025-06-03 15:22:25] 2025-06-03 19:22:08,757 | INFO     | [job] job monitor thread has finished
[2025-06-03 15:22:25] 2025-06-03 19:22:08,937 | INFO     | [job] validate thread has finished
[2025-06-03 15:22:25] 2025-06-03 19:22:09,111 | INFO     | [payload] failed_post thread has finished
[2025-06-03 15:22:25] 2025-06-03 19:22:09,210 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 15:22:25] 2025-06-03 19:22:09,216 | INFO     | [data] copytool_out thread has finished
[2025-06-03 15:22:25] 2025-06-03 19:22:09,225 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 15:22:25] 2025-06-03 19:22:09,318 | INFO     | [job] control thread has finished
[2025-06-03 15:22:25] 2025-06-03 19:22:09,340 | INFO     | [data] copytool_in thread has finished
[2025-06-03 15:22:25] 2025-06-03 19:22:09,342 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 15:22:25] 2025-06-03 19:22:09,428 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 15:22:25] 2025-06-03 19:22:13,230 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 15:22:25] 2025-06-03 19:22:17,758 | INFO     | job.realtimelogging is not enabled
[2025-06-03 15:22:25] 2025-06-03 19:22:18,763 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 15:22:25] 2025-06-03 19:22:19,865 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140712478963520)>', '<ExcThread(monitor, started 140711844374272)>']
[2025-06-03 15:22:25] 2025-06-03 19:22:20,278 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 15:22:25] 2025-06-03 19:22:20,278 | INFO     | [monitor] control thread has ended
[2025-06-03 15:22:25] 2025-06-03 19:22:24,890 | INFO     | all workflow threads have been joined
[2025-06-03 15:22:25] 2025-06-03 19:22:24,890 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 15:22:25] 2025-06-03 19:22:24,890 | INFO     | traces error code: 0
[2025-06-03 15:22:25] 2025-06-03 19:22:24,891 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 15:22:25] 2025-06-03 19:22:25,009 [wrapper] ==== pilot stdout END ====
[2025-06-03 15:22:25] 2025-06-03 19:22:25,012 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 15:22:25] 2025-06-03 19:22:25,015 [wrapper] pilotpid: 653830
[2025-06-03 15:22:25] 2025-06-03 19:22:25,017 [wrapper] Pilot exit status: 0
[2025-06-03 15:22:25] 2025-06-03 19:22:25,026 [wrapper] pandaids: 6677636296
[2025-06-03 15:22:25] 2025-06-03 19:22:25,078 [wrapper] cleanup supervisor_pilot  850929 653832
[2025-06-03 15:22:25] 2025-06-03 19:22:25,083 [wrapper] Test setup, not cleaning
[2025-06-03 15:22:25] 2025-06-03 19:22:25,086 [wrapper] apfmon messages muted
[2025-06-03 15:22:25] 2025-06-03 19:22:25,088 [wrapper] ==== wrapper stdout END ====
[2025-06-03 15:22:25] 2025-06-03 19:22:25,090 [wrapper] ==== wrapper stderr END ====
[2025-06-03 15:22:25]  *** Error codes and diagnostics ***
[2025-06-03 15:22:25]     "exeErrorCode": 0,
[2025-06-03 15:22:25]     "exeErrorDiag": "",
[2025-06-03 15:22:25]     "pilotErrorCode": 0,
[2025-06-03 15:22:25]     "pilotErrorDiag": "",
[2025-06-03 15:22:25]  *** Listing of results directory ***
[2025-06-03 15:22:25] total 389088
[2025-06-03 15:22:25] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 09:40 pilot3.tar.gz
[2025-06-03 15:22:25] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 09:42 queuedata.json
[2025-06-03 15:22:25] -rwx------. 1 boincer umatlas     37140 Jun  3 09:43 runpilot2-wrapper.sh
[2025-06-03 15:22:25] -rw-r--r--. 1 boincer umatlas       100 Jun  3 13:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 15:22:25] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 13:52 run_atlas
[2025-06-03 15:22:25] -rw-r--r--. 1 boincer umatlas       105 Jun  3 13:52 job.xml
[2025-06-03 15:22:25] -rw-r--r--. 2 boincer umatlas 215103882 Jun  3 13:52 EVNT.45006593._001383.pool.root.1
[2025-06-03 15:22:25] -rw-r--r--. 2 boincer umatlas    508885 Jun  3 13:52 input.tar.gz
[2025-06-03 15:22:25] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:52 start_atlas.sh
[2025-06-03 15:22:25] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 13:52 shared
[2025-06-03 15:22:25] -rw-r--r--. 1 boincer umatlas         0 Jun  3 13:52 boinc_lockfile
[2025-06-03 15:22:25] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 13:52 pandaJob.out
[2025-06-03 15:22:25] -rw-------. 1 boincer umatlas    985078 Jun  3 13:52 agis_schedconf.cvmfs.json
[2025-06-03 15:22:25] -rw-------. 1 boincer umatlas   1603667 Jun  3 13:52 agis_ddmendpoints.agis.ALL.json
[2025-06-03 15:22:25] drwx------. 4 boincer umatlas      4096 Jun  3 13:52 pilot3
[2025-06-03 15:22:25] -rw-r--r--. 1 boincer umatlas      6613 Jun  3 15:20 init_data.xml
[2025-06-03 15:22:25] -rw-------. 1 boincer umatlas 177822689 Jun  3 15:21 HITS.45006595._034395.pool.root.1
[2025-06-03 15:22:25] -rw-r--r--. 1 boincer umatlas       529 Jun  3 15:21 boinc_task_state.xml
[2025-06-03 15:22:25] -rw-------. 1 boincer umatlas        95 Jun  3 15:21 pilot_heartbeat.json
[2025-06-03 15:22:25] -rw-------. 1 boincer umatlas      1031 Jun  3 15:21 memory_monitor_summary.json
[2025-06-03 15:22:25] -rw-------. 1 boincer umatlas    317140 Jun  3 15:21 log.45006595._034395.job.log.tgz.1
[2025-06-03 15:22:25] -rw-------. 1 boincer umatlas      7708 Jun  3 15:22 heartbeat.json
[2025-06-03 15:22:25] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 15:22 boinc_mmap_file
[2025-06-03 15:22:25] -rw-r--r--. 1 boincer umatlas        27 Jun  3 15:22 wrapper_checkpoint.txt
[2025-06-03 15:22:25] -rw-------. 1 boincer umatlas      4425 Jun  3 15:22 pilotlog.txt
[2025-06-03 15:22:25] -rw-------. 1 boincer umatlas    518398 Jun  3 15:22 log.45006595._034395.job.log.1
[2025-06-03 15:22:25] -rw-------. 1 boincer umatlas       357 Jun  3 15:22 output.list
[2025-06-03 15:22:25] -rw-r--r--. 1 boincer umatlas       620 Jun  3 15:22 runtime_log
[2025-06-03 15:22:25] -rw-------. 1 boincer umatlas    849920 Jun  3 15:22 result.tar.gz
[2025-06-03 15:22:25] -rw-r--r--. 1 boincer umatlas      8649 Jun  3 15:22 runtime_log.err
[2025-06-03 15:22:25] -rw-------. 1 boincer umatlas       650 Jun  3 15:22 JZYNDma6gg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmboYKDmzL1fzm.diag
[2025-06-03 15:22:25] -rw-r--r--. 1 boincer umatlas     21260 Jun  3 15:22 stderr.txt
[2025-06-03 15:22:25] HITS file was successfully produced:
[2025-06-03 15:22:25] -rw-------. 1 boincer umatlas 177822689 Jun  3 15:21 shared/HITS.pool.root.1
[2025-06-03 15:22:25]  *** Contents of shared directory: ***
[2025-06-03 15:22:25] total 385072
[2025-06-03 15:22:25] -rw-r--r--. 2 boincer umatlas 215103882 Jun  3 13:52 ATLAS.root_0
[2025-06-03 15:22:25] -rw-r--r--. 2 boincer umatlas    508885 Jun  3 13:52 input.tar.gz
[2025-06-03 15:22:25] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:52 start_atlas.sh
[2025-06-03 15:22:25] -rw-------. 1 boincer umatlas 177822689 Jun  3 15:21 HITS.pool.root.1
[2025-06-03 15:22:25] -rw-------. 1 boincer umatlas    849920 Jun  3 15:22 result.tar.gz
15:22:26 (649734): run_atlas exited; CPU time 37422.208286
15:22:26 (649734): called boinc_finish(0)

</stderr_txt>
]]>

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