Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:39:49 (2504922): wrapper (7.7.26015): starting
05:39:49 (2504922): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 05:39:49] Arguments: --nthreads 4
[2025-06-05 05:39:49] Threads: 4
[2025-06-05 05:39:49] Checking for CVMFS
[2025-06-05 05:39:49] No cvmfs_config command found, will try listing directly
[2025-06-05 05:39:49] CVMFS is ok
[2025-06-05 05:39:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 05:39:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 05:39:49] Further information can be found at the LHC@home message board.
[2025-06-05 05:39:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 05:39:49] Checking for apptainer binary...
[2025-06-05 05:39:49] which: no apptainer in ((null))
[2025-06-05 05:39:49] apptainer is not installed, using version from CVMFS
[2025-06-05 05:39:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 05:39:49] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-06-05 05:39:49] apptainer works
[2025-06-05 05:39:49] Set ATHENA_PROC_NUMBER=4
[2025-06-05 05:39:49] Set ATHENA_CORE_NUMBER=4
[2025-06-05 05:39:49] Starting ATLAS job with PandaID=6677676464
[2025-06-05 05:39:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 08:07:39]  *** The last 200 lines of the pilot log: ***
[2025-06-05 08:07:39] 2025-06-05 06:04:49,696 | INFO     | executing command: lscpu
[2025-06-05 08:07:39] 2025-06-05 06:04:49,816 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 08:07:39] 2025-06-05 06:04:51,059 | INFO     | monitor loop #596: job 0:6677676464 is in state 'finished'
[2025-06-05 08:07:39] 2025-06-05 06:04:51,059 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:07:39] 2025-06-05 06:04:53,562 | INFO     | monitor loop #597: job 0:6677676464 is in state 'finished'
[2025-06-05 08:07:39] 2025-06-05 06:04:53,562 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:07:39] 2025-06-05 06:04:55,902 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 08:07:39] 2025-06-05 06:04:55,903 | INFO     | using path: /scratch/boinc/var/slot120/slots/0/PanDA_Pilot-6677676464/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 08:07:39] 2025-06-05 06:04:55,904 | INFO     | extracted standard info from prmon json
[2025-06-05 08:07:39] 2025-06-05 06:04:55,904 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 08:07:39] 2025-06-05 06:04:55,904 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 08:07:39] 2025-06-05 06:04:55,904 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 08:07:39] 2025-06-05 06:04:55,905 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 08:07:39] 2025-06-05 06:04:55,908 | INFO     | fitting pss+swap vs Time
[2025-06-05 08:07:39] 2025-06-05 06:04:55,908 | INFO     | sum of square deviations: 887813855.5
[2025-06-05 08:07:39] 2025-06-05 06:04:55,909 | INFO     | sum of deviations: 16656829061.5
[2025-06-05 08:07:39] 2025-06-05 06:04:55,909 | INFO     | mean x: 1749099139.5
[2025-06-05 08:07:39] 2025-06-05 06:04:55,909 | INFO     | mean y: 2297851.1056338027
[2025-06-05 08:07:39] 2025-06-05 06:04:55,909 | INFO     | -- intersect: -32813641208.394936
[2025-06-05 08:07:39] 2025-06-05 06:04:55,910 | INFO     | intersect: -32813641208.394936
[2025-06-05 08:07:39] 2025-06-05 06:04:55,910 | INFO     | chi2: 1.6600917592253839
[2025-06-05 08:07:39] 2025-06-05 06:04:55,910 | INFO     | sum of square deviations: 797291228.0
[2025-06-05 08:07:39] 2025-06-05 06:04:55,911 | INFO     | sum of deviations: 16091240996.0
[2025-06-05 08:07:39] 2025-06-05 06:04:55,911 | INFO     | mean x: 1749098987.0
[2025-06-05 08:07:39] 2025-06-05 06:04:55,911 | INFO     | mean y: 2296897.7810218977
[2025-06-05 08:07:39] 2025-06-05 06:04:55,911 | INFO     | -- intersect: -35298697691.45892
[2025-06-05 08:07:39] 2025-06-05 06:04:55,911 | INFO     | intersect: -35298697691.45892
[2025-06-05 08:07:39] 2025-06-05 06:04:55,912 | INFO     | chi2: 1.6624782252123274
[2025-06-05 08:07:39] 2025-06-05 06:04:55,912 | INFO     | current chi2=1.6624782252123274 (change=-0.14375506496442256 %)
[2025-06-05 08:07:39] 2025-06-05 06:04:55,912 | INFO     | right removable region: 136
[2025-06-05 08:07:39] 2025-06-05 06:04:55,912 | INFO     | sum of square deviations: 797291228.0
[2025-06-05 08:07:39] 2025-06-05 06:04:55,913 | INFO     | sum of deviations: -5441435460.000002
[2025-06-05 08:07:39] 2025-06-05 06:04:55,913 | INFO     | mean x: 1749099292.0
[2025-06-05 08:07:39] 2025-06-05 06:04:55,913 | INFO     | mean y: 2334526.7737226277
[2025-06-05 08:07:39] 2025-06-05 06:04:55,913 | INFO     | -- intersect: 11939767896.540707
[2025-06-05 08:07:39] 2025-06-05 06:04:55,913 | INFO     | intersect: 11939767896.540707
[2025-06-05 08:07:39] 2025-06-05 06:04:55,914 | INFO     | chi2: 0.013240791644136217
[2025-06-05 08:07:39] 2025-06-05 06:04:55,914 | INFO     | current chi2=0.013240791644136217 (change=99.20240603746419 %)
[2025-06-05 08:07:39] 2025-06-05 06:04:55,914 | INFO     | sum of square deviations: 713140813.0
[2025-06-05 08:07:39] 2025-06-05 06:04:55,915 | INFO     | sum of deviations: -3785260572.0
[2025-06-05 08:07:39] 2025-06-05 06:04:55,915 | INFO     | mean x: 1749099444.5
[2025-06-05 08:07:39] 2025-06-05 06:04:55,915 | INFO     | mean y: 2331515.5606060605
[2025-06-05 08:07:39] 2025-06-05 06:04:55,915 | INFO     | -- intersect: 9286328508.974798
[2025-06-05 08:07:39] 2025-06-05 06:04:55,915 | INFO     | intersect: 9286328508.974798
[2025-06-05 08:07:39] 2025-06-05 06:04:55,915 | INFO     | chi2: 0.010306330789689958
[2025-06-05 08:07:39] 2025-06-05 06:04:55,916 | INFO     | current chi2=0.010306330789689958 (change=22.16227649610215 %)
[2025-06-05 08:07:39] 2025-06-05 06:04:55,916 | INFO     | left removable region: 20
[2025-06-05 08:07:39] 2025-06-05 06:04:55,916 | INFO     | sum of square deviations: 483971865.0
[2025-06-05 08:07:39] 2025-06-05 06:04:55,916 | INFO     | sum of deviations: -944306748.5
[2025-06-05 08:07:39] 2025-06-05 06:04:55,917 | INFO     | mean x: 1749099566.5
[2025-06-05 08:07:39] 2025-06-05 06:04:55,917 | INFO     | mean y: 2325959.974137931
[2025-06-05 08:07:39] 2025-06-05 06:04:55,917 | INFO     | -- intersect: 3415099808.810112
[2025-06-05 08:07:39] 2025-06-05 06:04:55,917 | INFO     | intersect: 3415099808.810112
[2025-06-05 08:07:39] 2025-06-05 06:04:55,917 | INFO     | chi2: 0.003781312711325629
[2025-06-05 08:07:39] 2025-06-05 06:04:55,917 | INFO     | -- intersect: 3415099808.810112
[2025-06-05 08:07:39] 2025-06-05 06:04:55,918 | INFO     | current memory leak: -1.95 B/s (using 116 data points, chi2=0.00)
[2025-06-05 08:07:39] 2025-06-05 06:04:55,918 | INFO     | ..............................
[2025-06-05 08:07:39] 2025-06-05 06:04:55,918 | INFO     | . Timing measurements:
[2025-06-05 08:07:39] 2025-06-05 06:04:55,918 | INFO     | . get job = 0 s
[2025-06-05 08:07:39] 2025-06-05 06:04:55,918 | INFO     | . initial setup = 1 s
[2025-06-05 08:07:39] 2025-06-05 06:04:55,919 | INFO     | . payload setup = 10 s
[2025-06-05 08:07:39] 2025-06-05 06:04:55,919 | INFO     | . stage-in = 0 s
[2025-06-05 08:07:39] 2025-06-05 06:04:55,919 | INFO     | . payload execution = 8648 s
[2025-06-05 08:07:39] 2025-06-05 06:04:55,919 | INFO     | . stage-out = 0 s
[2025-06-05 08:07:39] 2025-06-05 06:04:55,919 | INFO     | . log creation = 0 s
[2025-06-05 08:07:39] 2025-06-05 06:04:55,919 | INFO     | ..............................
[2025-06-05 08:07:39] 2025-06-05 06:04:56,022 | INFO     | 
[2025-06-05 08:07:39] 2025-06-05 06:04:56,023 | INFO     | job summary report
[2025-06-05 08:07:39] 2025-06-05 06:04:56,023 | INFO     | --------------------------------------------------
[2025-06-05 08:07:39] 2025-06-05 06:04:56,023 | INFO     | PanDA job id: 6677676464
[2025-06-05 08:07:39] 2025-06-05 06:04:56,023 | INFO     | task id: 45006595
[2025-06-05 08:07:39] 2025-06-05 06:04:56,023 | INFO     | errors: (none)
[2025-06-05 08:07:39] 2025-06-05 06:04:56,023 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 08:07:39] 2025-06-05 06:04:56,023 | INFO     | pilot state: finished 
[2025-06-05 08:07:39] 2025-06-05 06:04:56,023 | INFO     | transexitcode: 0
[2025-06-05 08:07:39] 2025-06-05 06:04:56,023 | INFO     | exeerrorcode: 0
[2025-06-05 08:07:39] 2025-06-05 06:04:56,023 | INFO     | exeerrordiag: 
[2025-06-05 08:07:39] 2025-06-05 06:04:56,023 | INFO     | exitcode: 0
[2025-06-05 08:07:39] 2025-06-05 06:04:56,023 | INFO     | exitmsg: OK
[2025-06-05 08:07:39] 2025-06-05 06:04:56,023 | INFO     | cpuconsumptiontime: 32778 s
[2025-06-05 08:07:39] 2025-06-05 06:04:56,024 | INFO     | nevents: 400
[2025-06-05 08:07:39] 2025-06-05 06:04:56,024 | INFO     | neventsw: 0
[2025-06-05 08:07:39] 2025-06-05 06:04:56,024 | INFO     | pid: 2516788
[2025-06-05 08:07:39] 2025-06-05 06:04:56,024 | INFO     | pgrp: 2516788
[2025-06-05 08:07:39] 2025-06-05 06:04:56,024 | INFO     | corecount: 4
[2025-06-05 08:07:39] 2025-06-05 06:04:56,024 | INFO     | event service: False
[2025-06-05 08:07:39] 2025-06-05 06:04:56,024 | INFO     | sizes: {0: 2397354, 1: 2397354, 7: 2397588, 11: 2397616, 8662: 2425827, 8664: 2434792, 8665: 2434976, 8674: 2435146}
[2025-06-05 08:07:39] 2025-06-05 06:04:56,024 | INFO     | --------------------------------------------------
[2025-06-05 08:07:39] 2025-06-05 06:04:56,024 | INFO     | 
[2025-06-05 08:07:39] 2025-06-05 06:04:56,024 | INFO     | executing command: ls -lF /scratch/boinc/var/slot120/slots/0
[2025-06-05 08:07:39] 2025-06-05 06:04:56,052 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 08:07:39] 2025-06-05 06:04:56,052 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 08:07:39] 2025-06-05 06:04:56,052 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 08:07:39] 2025-06-05 06:04:56,053 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 08:07:39] 2025-06-05 06:04:56,053 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 08:07:39] 2025-06-05 06:04:56,053 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 08:07:39] 2025-06-05 06:04:56,053 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 08:07:39] 2025-06-05 06:04:56,053 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 08:07:39] 2025-06-05 06:04:56,053 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 08:07:39] 2025-06-05 06:04:56,053 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 08:07:39] 2025-06-05 06:04:56,053 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 08:07:39] 2025-06-05 06:04:56,053 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 08:07:39] 2025-06-05 06:04:56,053 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 08:07:39] 2025-06-05 06:04:56,054 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 08:07:39] 2025-06-05 06:04:56,054 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 08:07:39] 2025-06-05 06:04:56,054 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 08:07:39] 2025-06-05 06:04:56,054 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 08:07:39] 2025-06-05 06:04:56,054 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 08:07:39] 2025-06-05 06:04:56,054 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 08:07:39] 2025-06-05 06:04:56,054 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 08:07:39] 2025-06-05 06:04:56,054 | INFO     | job 6677676464 has completed (purged errors)
[2025-06-05 08:07:39] 2025-06-05 06:04:56,054 | INFO     | overall cleanup function is called
[2025-06-05 08:07:39] 2025-06-05 06:04:57,063 | INFO     | --- collectZombieJob: --- 10, [2516788]
[2025-06-05 08:07:39] 2025-06-05 06:04:57,063 | INFO     | zombie collector waiting for pid 2516788
[2025-06-05 08:07:39] 2025-06-05 06:04:57,063 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 08:07:39] 2025-06-05 06:04:57,063 | INFO     | collected zombie processes
[2025-06-05 08:07:39] 2025-06-05 06:04:57,063 | INFO     | will attempt to kill all subprocesses of pid=2516788
[2025-06-05 08:07:39] 2025-06-05 06:04:57,801 | INFO     | process IDs to be killed: [2516788] (in reverse order)
[2025-06-05 08:07:39] 2025-06-05 06:04:58,037 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 08:07:39] 2025-06-05 06:04:58,038 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 08:07:39] 2025-06-05 06:04:58,069 | INFO     | did not find any defunct processes belonging to 2516788
[2025-06-05 08:07:39] 2025-06-05 06:04:58,097 | INFO     | did not find any defunct processes belonging to 2516788
[2025-06-05 08:07:39] 2025-06-05 06:04:58,098 | INFO     | ready for new job
[2025-06-05 08:07:39] 2025-06-05 06:04:58,098 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 08:07:39] 2025-06-05 06:04:58,100 | INFO     | **************************************
[2025-06-05 08:07:39] 2025-06-05 06:04:58,101 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 08:07:39] 2025-06-05 06:04:58,101 | INFO     | **************************************
[2025-06-05 08:07:39] 2025-06-05 06:04:58,101 | INFO     | 
[2025-06-05 08:07:39] 2025-06-05 06:04:58,109 | INFO     | architecture information:
[2025-06-05 08:07:39] 2025-06-05 06:04:58,110 | INFO     | executing command: cat /etc/os-release
[2025-06-05 08:07:39] 2025-06-05 06:04:58,132 | INFO     | cat /etc/os-release:
[2025-06-05 08:07:39] NAME="CentOS Linux"
[2025-06-05 08:07:39] VERSION="7 (Core)"
[2025-06-05 08:07:39] ID="centos"
[2025-06-05 08:07:39] ID_LIKE="rhel fedora"
[2025-06-05 08:07:39] VERSION_ID="7"
[2025-06-05 08:07:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 08:07:39] ANSI_COLOR="0;31"
[2025-06-05 08:07:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 08:07:39] HOME_URL="https://www.centos.org/"
[2025-06-05 08:07:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 08:07:39] 
[2025-06-05 08:07:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 08:07:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 08:07:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 08:07:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 08:07:39] 
[2025-06-05 08:07:39] 2025-06-05 06:04:58,133 | INFO     | **************************************
[2025-06-05 08:07:39] 2025-06-05 06:04:58,635 | INFO     | executing command: df -mP /scratch/boinc/var/slot120/slots/0
[2025-06-05 08:07:39] 2025-06-05 06:04:58,660 | INFO     | sufficient remaining disk space (3274170171392 B)
[2025-06-05 08:07:39] 2025-06-05 06:04:58,660 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 08:07:39] 2025-06-05 06:04:58,660 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 08:07:39] 2025-06-05 06:04:58,660 | INFO     | update_server=False
[2025-06-05 08:07:39] 2025-06-05 06:04:58,660 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 08:07:39] 2025-06-05 06:04:58,854 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 08:07:39] 2025-06-05 06:04:59,059 | INFO     | all payload control threads have been joined
[2025-06-05 08:07:39] 2025-06-05 06:04:59,059 | INFO     | all job control threads have been joined
[2025-06-05 08:07:39] 2025-06-05 06:04:59,160 | INFO     | all data control threads have been joined
[2025-06-05 08:07:39] 2025-06-05 06:04:59,578 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:07:39] 2025-06-05 06:04:59,578 | INFO     | aborting loop
[2025-06-05 08:07:39] 2025-06-05 06:04:59,667 | INFO     | [job] retrieve thread has finished
[2025-06-05 08:07:39] 2025-06-05 06:04:59,708 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 08:07:39] 2025-06-05 06:04:59,709 | INFO     | [job] validate thread has finished
[2025-06-05 08:07:39] 2025-06-05 06:04:59,776 | INFO     | PID=2508830 has CPU usage=19.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 08:07:39] 2025-06-05 06:04:59,776 | INFO     | .. there are 15 such processes running
[2025-06-05 08:07:39] 2025-06-05 06:04:59,776 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 08:07:39] 2025-06-05 06:04:59,776 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 08:07:39] 2025-06-05 06:04:59,776 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 08:07:39] 2025-06-05 06:04:59,905 | INFO     | [data] copytool_in thread has finished
[2025-06-05 08:07:39] 2025-06-05 06:04:59,925 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 08:07:39] 2025-06-05 06:05:00,064 | INFO     | [payload] control thread has finished
[2025-06-05 08:07:39] 2025-06-05 06:05:00,065 | INFO     | [job] control thread has finished
[2025-06-05 08:07:39] 2025-06-05 06:05:00,163 | INFO     | [data] control thread has finished
[2025-06-05 08:07:39] 2025-06-05 06:05:00,209 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 08:07:39] 2025-06-05 06:05:00,583 | INFO     | [job] job monitor thread has finished
[2025-06-05 08:07:39] 2025-06-05 06:05:00,786 | INFO     | [payload] validate_post thread has finished
[2025-06-05 08:07:39] 2025-06-05 06:05:00,859 | INFO     | [data] copytool_out thread has finished
[2025-06-05 08:07:39] 2025-06-05 06:05:01,005 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 08:07:39] 2025-06-05 06:05:01,033 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:07:39] 2025-06-05 06:05:01,231 | INFO     | [payload] failed_post thread has finished
[2025-06-05 08:07:39] 2025-06-05 06:05:02,038 | INFO     | [job] queue monitor thread has finished
[2025-06-05 08:07:39] 2025-06-05 06:05:02,042 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 08:07:39] 2025-06-05 06:05:06,048 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 08:07:39] 2025-06-05 06:05:06,618 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22677654923072)>', '<ExcThread(monitor, started 22677345502976)>']
[2025-06-05 08:07:39] 2025-06-05 06:05:06,811 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 08:07:39] 2025-06-05 06:05:06,811 | INFO     | [monitor] control thread has ended
[2025-06-05 08:07:39] 2025-06-05 06:05:11,643 | INFO     | all workflow threads have been joined
[2025-06-05 08:07:39] 2025-06-05 06:05:11,643 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 08:07:39] 2025-06-05 06:05:11,643 | INFO     | traces error code: 0
[2025-06-05 08:07:39] 2025-06-05 06:05:11,644 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 08:07:39] 2025-06-05 06:05:11,827 [wrapper] ==== pilot stdout END ====
[2025-06-05 08:07:39] 2025-06-05 06:05:11,831 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 08:07:39] 2025-06-05 06:05:11,836 [wrapper] pilotpid: 2508830
[2025-06-05 08:07:39] 2025-06-05 06:05:11,840 [wrapper] Pilot exit status: 0
[2025-06-05 08:07:39] 2025-06-05 06:05:11,854 [wrapper] pandaids: 6677676464
[2025-06-05 08:07:39] 2025-06-05 06:05:12,012 [wrapper] cleanup supervisor_pilot 3007155 2508831
[2025-06-05 08:07:39] 2025-06-05 06:05:12,016 [wrapper] Test setup, not cleaning
[2025-06-05 08:07:39] 2025-06-05 06:05:12,020 [wrapper] apfmon messages muted
[2025-06-05 08:07:39] 2025-06-05 06:05:12,024 [wrapper] ==== wrapper stdout END ====
[2025-06-05 08:07:39] 2025-06-05 06:05:12,027 [wrapper] ==== wrapper stderr END ====
[2025-06-05 08:07:39]  *** Error codes and diagnostics ***
[2025-06-05 08:07:39]     "exeErrorCode": 0,
[2025-06-05 08:07:39]     "exeErrorDiag": "",
[2025-06-05 08:07:39]     "pilotErrorCode": 0,
[2025-06-05 08:07:39]     "pilotErrorDiag": "",
[2025-06-05 08:07:39]  *** Listing of results directory ***
[2025-06-05 08:07:39] total 389736
[2025-06-05 08:07:39] -rw-r--r-- 1 boinc boinc    495897 Jun  3 16:52 pilot3.tar.gz
[2025-06-05 08:07:39] -rw-r--r-- 1 boinc boinc      5111 Jun  3 17:06 queuedata.json
[2025-06-05 08:07:39] -rwx------ 1 boinc boinc     37140 Jun  3 17:08 runpilot2-wrapper.sh
[2025-06-05 08:07:39] -rw-r--r-- 1 boinc boinc       100 Jun  5 05:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 08:07:39] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 05:39 run_atlas
[2025-06-05 08:07:39] -rw-r--r-- 1 boinc boinc       105 Jun  5 05:39 job.xml
[2025-06-05 08:07:39] -rw-r--r-- 2 boinc boinc 213532131 Jun  5 05:39 EVNT.45006593._001470.pool.root.1
[2025-06-05 08:07:39] -rw-r--r-- 1 boinc boinc      6687 Jun  5 05:39 init_data.xml
[2025-06-05 08:07:39] -rw-r--r-- 2 boinc boinc     15093 Jun  5 05:39 start_atlas.sh
[2025-06-05 08:07:39] drwxrwx--x 2 boinc boinc      4096 Jun  5 05:39 shared
[2025-06-05 08:07:39] -rw-r--r-- 2 boinc boinc    508879 Jun  5 05:39 input.tar.gz
[2025-06-05 08:07:39] -rw-r--r-- 1 boinc boinc         0 Jun  5 05:39 boinc_lockfile
[2025-06-05 08:07:39] -rw-r--r-- 1 boinc boinc      2525 Jun  5 05:39 pandaJob.out
[2025-06-05 08:07:39] -rw------- 1 boinc boinc    987109 Jun  5 05:40 agis_schedconf.cvmfs.json
[2025-06-05 08:07:39] -rw------- 1 boinc boinc   1598969 Jun  5 05:40 agis_ddmendpoints.agis.ALL.json
[2025-06-05 08:07:39] drwx------ 4 boinc boinc      4096 Jun  5 05:40 pilot3
[2025-06-05 08:07:39] -rw------- 1 boinc boinc 179535461 Jun  5 08:04 HITS.45006595._036588.pool.root.1
[2025-06-05 08:07:39] -rw-r--r-- 1 boinc boinc       528 Jun  5 08:04 boinc_task_state.xml
[2025-06-05 08:07:39] -rw------- 1 boinc boinc      1028 Jun  5 08:04 memory_monitor_summary.json
[2025-06-05 08:07:39] -rw------- 1 boinc boinc    280365 Jun  5 08:04 log.45006595._036588.job.log.tgz.1
[2025-06-05 08:07:39] -rw------- 1 boinc boinc        95 Jun  5 08:04 pilot_heartbeat.json
[2025-06-05 08:07:39] -rw------- 1 boinc boinc      7699 Jun  5 08:04 heartbeat.json
[2025-06-05 08:07:39] -rw------- 1 boinc boinc      4761 Jun  5 08:05 pilotlog.txt
[2025-06-05 08:07:39] -rw------- 1 boinc boinc    812324 Jun  5 08:05 log.45006595._036588.job.log.1
[2025-06-05 08:07:39] -rw------- 1 boinc boinc       357 Jun  5 08:05 output.list
[2025-06-05 08:07:39] -rw-r--r-- 1 boinc boinc       620 Jun  5 08:05 runtime_log
[2025-06-05 08:07:39] -rw------- 1 boinc boinc   1116160 Jun  5 08:05 result.tar.gz
[2025-06-05 08:07:39] -rw------- 1 boinc boinc       663 Jun  5 08:05 ZB8KDmSQig7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGlkKDmqzS3Em.diag
[2025-06-05 08:07:39] -rw-r--r-- 1 boinc boinc      9040 Jun  5 08:05 runtime_log.err
[2025-06-05 08:07:39] -rw-r--r-- 1 boinc boinc        27 Jun  5 08:07 wrapper_checkpoint.txt
[2025-06-05 08:07:39] -rw-r--r-- 1 boinc boinc      8192 Jun  5 08:07 boinc_mmap_file
[2025-06-05 08:07:39] -rw-r--r-- 1 boinc boinc     21001 Jun  5 08:07 stderr.txt
[2025-06-05 08:07:39] HITS file was successfully produced:
[2025-06-05 08:07:39] -rw------- 1 boinc boinc 179535461 Jun  5 08:04 shared/HITS.pool.root.1
[2025-06-05 08:07:39]  *** Contents of shared directory: ***
[2025-06-05 08:07:39] total 385472
[2025-06-05 08:07:39] -rw-r--r-- 2 boinc boinc 213532131 Jun  5 05:39 ATLAS.root_0
[2025-06-05 08:07:39] -rw-r--r-- 2 boinc boinc     15093 Jun  5 05:39 start_atlas.sh
[2025-06-05 08:07:39] -rw-r--r-- 2 boinc boinc    508879 Jun  5 05:39 input.tar.gz
[2025-06-05 08:07:39] -rw------- 1 boinc boinc 179535461 Jun  5 08:04 HITS.pool.root.1
[2025-06-05 08:07:39] -rw------- 1 boinc boinc   1116160 Jun  5 08:05 result.tar.gz
08:07:40 (2504922): run_atlas exited; CPU time 33290.920453
08:07:40 (2504922): called boinc_finish(0)

</stderr_txt>
]]>

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