Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:16:19 (3250264): wrapper (7.7.26015): starting
11:16:19 (3250264): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 11:16:19] Arguments: --nthreads 12
[2025-06-03 11:16:19] Threads: 12
[2025-06-03 11:16:19] Checking for CVMFS
[2025-06-03 11:16:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 11:16:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 11:16:21] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 11:16:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 11:16:22] 2.11.5.0 506603 22128 203688 146752 2 47 27352555 45568000 23265 130560 0 240481371 99.827 133622723 27204 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 11:16:22] CVMFS is ok
[2025-06-03 11:16:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 11:16:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 11:16:22] Further information can be found at the LHC@home message board.
[2025-06-03 11:16:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 11:16:22] Checking for apptainer binary...
[2025-06-03 11:16:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 11:16:22] Running /usr/bin/apptainer --version
[2025-06-03 11:16:22] apptainer version 1.4.0-1.el9
[2025-06-03 11:16:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 11:16:22] wns0045.triumf.lcg
[2025-06-03 11:16:22] apptainer works
[2025-06-03 11:16:22] Set ATHENA_PROC_NUMBER=12
[2025-06-03 11:16:22] Set ATHENA_CORE_NUMBER=12
[2025-06-03 11:16:23] Starting ATLAS job with PandaID=6677783105
[2025-06-03 11:16:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 11:22:21]  *** The last 200 lines of the pilot log: ***
[2025-06-03 11:22:21] 2025-06-03 18:22:03,818 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 11:22:21] 2025-06-03 18:22:03,818 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 11:22:21] 2025-06-03 18:22:03,818 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 11:22:21] 2025-06-03 18:22:03,818 | WARNING  | wrong length of table data, x=[1748974731.0], y=[1204.0] (must be same and length>=4)
[2025-06-03 11:22:21] 2025-06-03 18:22:03,819 | INFO     | ..............................
[2025-06-03 11:22:21] 2025-06-03 18:22:03,819 | INFO     | . Timing measurements:
[2025-06-03 11:22:21] 2025-06-03 18:22:03,819 | INFO     | . get job = 0 s
[2025-06-03 11:22:21] 2025-06-03 18:22:03,819 | INFO     | . initial setup = 4 s
[2025-06-03 11:22:21] 2025-06-03 18:22:03,819 | INFO     | . payload setup = 26 s
[2025-06-03 11:22:21] 2025-06-03 18:22:03,819 | INFO     | . stage-in = 0 s
[2025-06-03 11:22:21] 2025-06-03 18:22:03,819 | INFO     | . payload execution = 69 s
[2025-06-03 11:22:21] 2025-06-03 18:22:03,819 | INFO     | . stage-out = 2 s
[2025-06-03 11:22:21] 2025-06-03 18:22:03,819 | INFO     | . log creation = 0 s
[2025-06-03 11:22:21] 2025-06-03 18:22:03,819 | INFO     | ..............................
[2025-06-03 11:22:21] 2025-06-03 18:22:03,819 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 11:22:21] 2025-06-03 18:22:03,819 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677783105/pilotlog.txt
[2025-06-03 11:22:21] 2025-06-03 18:22:03,891 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 11:22:21] - Log from pilotlog.txt -
[2025-06-03 11:22:21] 2025-06-03 18:22:03,816 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 11:22:21] 2025-06-03 18:22:03,817 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677783105/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 11:22:21] 2025-06-03 18:22:03,818 | INFO     | extracted standard info from prmon json
[2025-06-03 11:22:21] 2025-06-03 18:22:03,818 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 11:22:21] 2025-06-03 18:22:03,818 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 11:22:21] 2025-06-03 18:22:03,818 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 11:22:21] 2025-06-03 18:22:03,818 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 11:22:21] 2025-06-03 18:22:03,818 | WARNING  | wrong length of table data, x=[1748974731.0], y=[1204.0] (must be same and length>=4)
[2025-06-03 11:22:21] 2025-06-03 18:22:03,819 | INFO     | ..............................
[2025-06-03 11:22:21] 2025-06-03 18:22:03,819 | INFO     | . Timing measurements:
[2025-06-03 11:22:21] 2025-06-03 18:22:03,819 | INFO     | . get job = 0 s
[2025-06-03 11:22:21] 2025-06-03 18:22:03,819 | INFO     | . initial setup = 4 s
[2025-06-03 11:22:21] 2025-06-03 18:22:03,819 | INFO     | . payload setup = 26 s
[2025-06-03 11:22:21] 2025-06-03 18:22:03,819 | INFO     | . stage-in = 0 s
[2025-06-03 11:22:21] 2025-06-03 18:22:03,819 | INFO     | . payload execution = 69 s
[2025-06-03 11:22:21] 2025-06-03 18:22:03,819 | INFO     | . stage-out = 2 s
[2025-06-03 11:22:21] 2025-06-03 18:22:03,819 | INFO     | . log creation = 0 s
[2025-06-03 11:22:21] 2025-06-03 18:22:03,819 | INFO     | ..............................
[2025-06-03 11:22:21] 2025-06-03 18:22:03,819 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 11:22:21] 2025-06-03 18:22:03,819 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677783105/pilotlog.txt
[2025-06-03 11:22:21] 2025-06-03 18:22:03,891 | WARNING  | 
[2025-06-03 11:22:21] [begin log extracts]
[2025-06-03 11:22:21] - Log from pilotlog.txt -
[2025-06-03 11:22:21] 2025-06-03 18:22:03,816 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 11:22:21] 2025-06-03 18:22:03,817 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677783105/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 11:22:21] 2025-06-03 18:22:03,818 | INFO     | extracted standard info from prmon json
[2025-06-03 11:22:21] 2025-06-03 18:22:03,818 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 11:22:21] 2025-06-03 18:22:03,818 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 11:22:21] 2025-06-03 18:22:03,818 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 11:22:21] 2025-06-03 18:22:03,818 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 11:22:21] 2025-06-03 18:22:03,818 | WARNING  | wrong length of table data, x=[1748974731.0], y=[1204.0] (must be same and length>=4)
[2025-06-03 11:22:21] 2025-06-03 18:22:03,819 | INFO     | ..............................
[2025-06-03 11:22:21] 2025-06-03 18:22:03,819 | INFO     | . Timing measurements:
[2025-06-03 11:22:21] 2025-06-03 18:22:03,819 | INFO     | . get job = 0 s
[2025-06-03 11:22:21] 2025-06-03 18:22:03,819 | INFO     | . initial setup = 4 s
[2025-06-03 11:22:21] 2025-06-03 18:22:03,819 | INFO     | . payload setup = 26 s
[2025-06-03 11:22:21] 2025-06-03 18:22:03,819 | INFO     | . stage-in = 0 s
[2025-06-03 11:22:21] 2025-06-03 18:22:03,819 | INFO     | . payload execution = 69 s
[2025-06-03 11:22:21] 2025-06-03 18:22:03,819 | INFO     | . stage-out = 2 s
[2025-06-03 11:22:21] 2025-06-03 18:22:03,819 | INFO     | . log creation = 0 s
[2025-06-03 11:22:21] 2025-06-03 18:22:03,819 | INFO     | ..............................
[2025-06-03 11:22:21] 2025-06-03 18:22:03,819 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 11:22:21] 2025-06-03 18:22:03,819 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677783105/pilotlog.txt
[2025-06-03 11:22:21] [end log extracts]
[2025-06-03 11:22:21] 2025-06-03 18:22:03,892 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 11:22:21] 2025-06-03 18:22:03,892 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 11:22:21] 2025-06-03 18:22:04,613 | INFO     | 
[2025-06-03 11:22:21] 2025-06-03 18:22:04,613 | INFO     | job summary report
[2025-06-03 11:22:21] 2025-06-03 18:22:04,613 | INFO     | --------------------------------------------------
[2025-06-03 11:22:21] 2025-06-03 18:22:04,613 | INFO     | PanDA job id: 6677783105
[2025-06-03 11:22:21] 2025-06-03 18:22:04,613 | INFO     | task id: 45006595
[2025-06-03 11:22:21] 2025-06-03 18:22:04,613 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 11:19:29,724 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 11:22:21] 2025-06-03 18:22:04,613 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 11:22:21] 2025-06-03 18:22:04,614 | INFO     | pilot state: failed 
[2025-06-03 11:22:21] 2025-06-03 18:22:04,614 | INFO     | transexitcode: 65
[2025-06-03 11:22:21] 2025-06-03 18:22:04,614 | INFO     | exeerrorcode: 65
[2025-06-03 11:22:21] 2025-06-03 18:22:04,614 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 11:22:21] 2025-06-03 18:22:04,614 | INFO     | exitcode: 65
[2025-06-03 11:22:21] 2025-06-03 18:22:04,614 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 11:22:21] 2025-06-03 18:22:04,614 | INFO     | cpuconsumptiontime: 18 s
[2025-06-03 11:22:21] 2025-06-03 18:22:04,614 | INFO     | nevents: 0
[2025-06-03 11:22:21] 2025-06-03 18:22:04,614 | INFO     | neventsw: 0
[2025-06-03 11:22:21] 2025-06-03 18:22:04,614 | INFO     | pid: 3280633
[2025-06-03 11:22:21] 2025-06-03 18:22:04,614 | INFO     | pgrp: 3280633
[2025-06-03 11:22:21] 2025-06-03 18:22:04,614 | INFO     | corecount: 12
[2025-06-03 11:22:21] 2025-06-03 18:22:04,614 | INFO     | event service: False
[2025-06-03 11:22:21] 2025-06-03 18:22:04,614 | INFO     | sizes: {0: 2404356, 1: 2404954, 2: 2405237, 3: 2405237, 13: 2405265, 25: 2405321, 26: 2405683, 36: 2405711, 101: 2428920, 104: 2433183, 244: 2433297}
[2025-06-03 11:22:21] 2025-06-03 18:22:04,614 | INFO     | --------------------------------------------------
[2025-06-03 11:22:21] 2025-06-03 18:22:04,614 | INFO     | 
[2025-06-03 11:22:21] 2025-06-03 18:22:04,614 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 11:22:21] 2025-06-03 18:22:04,745 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 11:22:21] 2025-06-03 18:22:04,745 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 11:22:21] 2025-06-03 18:22:04,746 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 11:22:21] 2025-06-03 18:22:04,746 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 11:22:21] 2025-06-03 18:22:04,746 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 11:22:21] 2025-06-03 18:22:04,746 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 11:22:21] 2025-06-03 18:22:04,746 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 11:22:21] 2025-06-03 18:22:04,746 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 11:22:21] 2025-06-03 18:22:04,746 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 11:22:21] 2025-06-03 18:22:04,746 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 11:22:21] 2025-06-03 18:22:04,746 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 11:22:21] 2025-06-03 18:22:04,746 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 11:22:21] 2025-06-03 18:22:04,746 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 11:22:21] 2025-06-03 18:22:04,746 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 11:22:21] 2025-06-03 18:22:04,746 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 11:22:21] 2025-06-03 18:22:04,746 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 11:22:21] 2025-06-03 18:22:04,746 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 11:22:21] 2025-06-03 18:22:04,746 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 11:22:21] 2025-06-03 18:22:04,746 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 11:22:21] 2025-06-03 18:22:04,746 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 11:22:21] 2025-06-03 18:22:04,746 | INFO     | job 6677783105 has completed (purged errors)
[2025-06-03 11:22:21] 2025-06-03 18:22:04,747 | INFO     | overall cleanup function is called
[2025-06-03 11:22:21] 2025-06-03 18:22:05,757 | INFO     | --- collectZombieJob: --- 10, [3280633]
[2025-06-03 11:22:21] 2025-06-03 18:22:05,757 | INFO     | zombie collector waiting for pid 3280633
[2025-06-03 11:22:21] 2025-06-03 18:22:05,757 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 11:22:21] 2025-06-03 18:22:05,757 | INFO     | collected zombie processes
[2025-06-03 11:22:21] 2025-06-03 18:22:05,757 | INFO     | will attempt to kill all subprocesses of pid=3280633
[2025-06-03 11:22:21] 2025-06-03 18:22:06,440 | INFO     | PID=3263793 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 11:22:21] 2025-06-03 18:22:06,440 | INFO     | .. there are 49 such processes running
[2025-06-03 11:22:21] 2025-06-03 18:22:06,575 | INFO     | process IDs to be killed: [3280633] (in reverse order)
[2025-06-03 11:22:21] 2025-06-03 18:22:06,671 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 11:22:21] 2025-06-03 18:22:06,672 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 11:22:21] 2025-06-03 18:22:06,749 | INFO     | did not find any defunct processes belonging to 3280633
[2025-06-03 11:22:21] 2025-06-03 18:22:06,834 | INFO     | did not find any defunct processes belonging to 3280633
[2025-06-03 11:22:21] 2025-06-03 18:22:06,834 | INFO     | ready for new job
[2025-06-03 11:22:21] 2025-06-03 18:22:06,834 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 11:22:21] 2025-06-03 18:22:06,835 | INFO     | **************************************
[2025-06-03 11:22:21] 2025-06-03 18:22:06,835 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 11:22:21] 2025-06-03 18:22:06,835 | INFO     | **************************************
[2025-06-03 11:22:21] 2025-06-03 18:22:06,835 | INFO     | 
[2025-06-03 11:22:21] 2025-06-03 18:22:06,856 | INFO     | architecture information:
[2025-06-03 11:22:21] 2025-06-03 18:22:06,868 | INFO     | executing command: cat /etc/os-release
[2025-06-03 11:22:21] 2025-06-03 18:22:06,938 | INFO     | cat /etc/os-release:
[2025-06-03 11:22:21] NAME="CentOS Linux"
[2025-06-03 11:22:21] VERSION="7 (Core)"
[2025-06-03 11:22:21] ID="centos"
[2025-06-03 11:22:21] ID_LIKE="rhel fedora"
[2025-06-03 11:22:21] VERSION_ID="7"
[2025-06-03 11:22:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 11:22:21] ANSI_COLOR="0;31"
[2025-06-03 11:22:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 11:22:21] HOME_URL="https://www.centos.org/"
[2025-06-03 11:22:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 11:22:21] 
[2025-06-03 11:22:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 11:22:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 11:22:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 11:22:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 11:22:21] 
[2025-06-03 11:22:21] 2025-06-03 18:22:06,938 | INFO     | **************************************
[2025-06-03 11:22:21] 2025-06-03 18:22:07,442 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 11:22:21] 2025-06-03 18:22:07,541 | INFO     | sufficient remaining disk space (1001190850560 B)
[2025-06-03 11:22:21] 2025-06-03 18:22:07,542 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 11:22:21] 2025-06-03 18:22:07,542 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 11:22:21] 2025-06-03 18:22:07,542 | INFO     | update_server=False
[2025-06-03 11:22:21] 2025-06-03 18:22:07,542 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 11:22:21] 2025-06-03 18:22:07,542 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 11:22:21] 2025-06-03 18:22:07,783 | INFO     | all job control threads have been joined
[2025-06-03 11:22:21] 2025-06-03 18:22:07,802 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 11:22:21] 2025-06-03 18:22:07,802 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 11:22:21] 2025-06-03 18:22:07,802 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:22:21] 2025-06-03 18:22:07,802 | INFO     | will abort loop
[2025-06-03 11:22:21] 2025-06-03 18:22:07,898 | INFO     | all data control threads have been joined
[2025-06-03 11:22:21] 2025-06-03 18:22:08,181 | INFO     | all payload control threads have been joined
[2025-06-03 11:22:21] 2025-06-03 18:22:08,449 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 11:22:21] 2025-06-03 18:22:08,449 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 11:22:21] 2025-06-03 18:22:08,449 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 11:22:21] 2025-06-03 18:22:08,548 | INFO     | [job] retrieve thread has finished
[2025-06-03 11:22:21] 2025-06-03 18:22:08,691 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 11:22:21] 2025-06-03 18:22:08,789 | INFO     | [job] control thread has finished
[2025-06-03 11:22:21] 2025-06-03 18:22:08,808 | INFO     | [job] job monitor thread has finished
[2025-06-03 11:22:21] 2025-06-03 18:22:08,848 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 11:22:21] 2025-06-03 18:22:08,863 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 11:22:21] 2025-06-03 18:22:08,863 | INFO     | [job] validate thread has finished
[2025-06-03 11:22:21] 2025-06-03 18:22:08,905 | INFO     | [data] control thread has finished
[2025-06-03 11:22:21] 2025-06-03 18:22:09,065 | INFO     | [payload] validate_post thread has finished
[2025-06-03 11:22:21] 2025-06-03 18:22:09,190 | INFO     | [payload] control thread has finished
[2025-06-03 11:22:21] 2025-06-03 18:22:09,237 | INFO     | [payload] failed_post thread has finished
[2025-06-03 11:22:21] 2025-06-03 18:22:09,266 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:22:21] 2025-06-03 18:22:09,549 | INFO     | [data] copytool_out thread has finished
[2025-06-03 11:22:21] 2025-06-03 18:22:09,673 | INFO     | [data] copytool_in thread has finished
[2025-06-03 11:22:21] 2025-06-03 18:22:09,709 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 11:22:21] 2025-06-03 18:22:10,277 | INFO     | [job] queue monitor thread has finished
[2025-06-03 11:22:21] 2025-06-03 18:22:10,386 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 11:22:21] 2025-06-03 18:22:14,397 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 11:22:21] 2025-06-03 18:22:15,024 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139903333734208)>', '<ExcThread(monitor, started 139902477903616)>']
[2025-06-03 11:22:21] 2025-06-03 18:22:15,497 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 11:22:21] 2025-06-03 18:22:15,497 | INFO     | [monitor] control thread has ended
[2025-06-03 11:22:21] 2025-06-03 18:22:20,050 | INFO     | all workflow threads have been joined
[2025-06-03 11:22:21] 2025-06-03 18:22:20,050 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 11:22:21] 2025-06-03 18:22:20,050 | INFO     | traces error code: 0
[2025-06-03 11:22:21] 2025-06-03 18:22:20,050 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 11:22:21] 2025-06-03 18:22:20,228 [wrapper] ==== pilot stdout END ====
[2025-06-03 11:22:21] 2025-06-03 18:22:20,246 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 11:22:21] 2025-06-03 18:22:20,261 [wrapper] pilotpid: 3263793
[2025-06-03 11:22:21] 2025-06-03 18:22:20,271 [wrapper] Pilot exit status: 0
[2025-06-03 11:22:21] 2025-06-03 18:22:20,405 [wrapper] pandaids: 6677783105
[2025-06-03 11:22:21] 2025-06-03 18:22:20,553 [wrapper] cleanup supervisor_pilot 3263814 3263794
[2025-06-03 11:22:21] 2025-06-03 18:22:20,570 [wrapper] Test setup, not cleaning
[2025-06-03 11:22:21] 2025-06-03 18:22:20,583 [wrapper] apfmon messages muted
[2025-06-03 11:22:21] 2025-06-03 18:22:20,591 [wrapper] ==== wrapper stdout END ====
[2025-06-03 11:22:21] 2025-06-03 18:22:20,611 [wrapper] ==== wrapper stderr END ====
[2025-06-03 11:22:21]  *** Error codes and diagnostics ***
[2025-06-03 11:22:21]     "exeErrorCode": 65,
[2025-06-03 11:22:21]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 11:22:21]     "pilotErrorCode": 1305,
[2025-06-03 11:22:21]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 11:22:21]  *** Listing of results directory ***
[2025-06-03 11:22:21] total 215828
[2025-06-03 11:22:21] -rwx------. 1 boinc boinc     37140 Jun  3 09:42 runpilot2-wrapper.sh
[2025-06-03 11:22:21] -rw-r--r--. 1 boinc boinc      5111 Jun  3 09:42 queuedata.json
[2025-06-03 11:22:21] -rw-r--r--. 1 boinc boinc    495897 Jun  3 09:42 pilot3.tar.gz
[2025-06-03 11:22:21] -rw-r--r--. 1 boinc boinc       100 Jun  3 11:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 11:22:21] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 11:16 run_atlas
[2025-06-03 11:22:21] -rw-r--r--. 1 boinc boinc       105 Jun  3 11:16 job.xml
[2025-06-03 11:22:21] -rw-r--r--. 2 boinc boinc 216968742 Jun  3 11:16 EVNT.45006593._001567.pool.root.1
[2025-06-03 11:22:21] -rw-r--r--. 2 boinc boinc    508874 Jun  3 11:16 input.tar.gz
[2025-06-03 11:22:21] -rw-r--r--. 1 boinc boinc      6602 Jun  3 11:16 init_data.xml
[2025-06-03 11:22:21] -rw-r--r--. 2 boinc boinc     15093 Jun  3 11:16 start_atlas.sh
[2025-06-03 11:22:21] drwxrwx--x. 2 boinc boinc      4096 Jun  3 11:16 shared
[2025-06-03 11:22:21] -rw-r--r--. 1 boinc boinc         0 Jun  3 11:16 boinc_lockfile
[2025-06-03 11:22:21] -rw-r--r--. 1 boinc boinc      2525 Jun  3 11:16 pandaJob.out
[2025-06-03 11:22:21] -rw-------. 1 boinc boinc    986893 Jun  3 11:16 agis_schedconf.cvmfs.json
[2025-06-03 11:22:21] -rw-------. 1 boinc boinc   1603667 Jun  3 11:16 agis_ddmendpoints.agis.ALL.json
[2025-06-03 11:22:21] drwx------. 4 boinc boinc      4096 Jun  3 11:16 pilot3
[2025-06-03 11:22:21] -rw-r--r--. 1 boinc boinc       524 Jun  3 11:19 boinc_task_state.xml
[2025-06-03 11:22:21] -rw-------. 1 boinc boinc       973 Jun  3 11:19 memory_monitor_summary.json
[2025-06-03 11:22:21] -rw-------. 1 boinc boinc     20990 Jun  3 11:19 log.45006595._039069.job.log.tgz.1
[2025-06-03 11:22:21] -rw-------. 1 boinc boinc        95 Jun  3 11:21 pilot_heartbeat.json
[2025-06-03 11:22:21] -rw-------. 1 boinc boinc      8333 Jun  3 11:22 heartbeat.json
[2025-06-03 11:22:21] -rw-------. 1 boinc boinc      4538 Jun  3 11:22 pilotlog.txt
[2025-06-03 11:22:21] -rw-r--r--. 1 boinc boinc      8192 Jun  3 11:22 boinc_mmap_file
[2025-06-03 11:22:21] -rw-------. 1 boinc boinc     82036 Jun  3 11:22 log.45006595._039069.job.log.1
[2025-06-03 11:22:21] -rw-r--r--. 1 boinc boinc        23 Jun  3 11:22 wrapper_checkpoint.txt
[2025-06-03 11:22:21] -rw-------. 1 boinc boinc       188 Jun  3 11:22 output.list
[2025-06-03 11:22:21] -rw-r--r--. 1 boinc boinc       620 Jun  3 11:22 runtime_log
[2025-06-03 11:22:21] -rw-------. 1 boinc boinc    122880 Jun  3 11:22 result.tar.gz
[2025-06-03 11:22:21] -rw-r--r--. 1 boinc boinc      8484 Jun  3 11:22 runtime_log.err
[2025-06-03 11:22:21] -rw-------. 1 boinc boinc       647 Jun  3 11:22 6LSNDmUtjg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmUIZKDmcMCCYn.diag
[2025-06-03 11:22:21] -rw-r--r--. 1 boinc boinc     21768 Jun  3 11:22 stderr.txt
[2025-06-03 11:22:21] No HITS result produced
[2025-06-03 11:22:21]  *** Contents of shared directory: ***
[2025-06-03 11:22:21] total 212520
[2025-06-03 11:22:21] -rw-r--r--. 2 boinc boinc 216968742 Jun  3 11:16 ATLAS.root_0
[2025-06-03 11:22:21] -rw-r--r--. 2 boinc boinc    508874 Jun  3 11:16 input.tar.gz
[2025-06-03 11:22:21] -rw-r--r--. 2 boinc boinc     15093 Jun  3 11:16 start_atlas.sh
[2025-06-03 11:22:21] -rw-------. 1 boinc boinc    122880 Jun  3 11:22 result.tar.gz
11:22:22 (3250264): run_atlas exited; CPU time 30.245185
11:22:22 (3250264): called boinc_finish(0)

</stderr_txt>
]]>

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