Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:53:10 (3044361): wrapper (7.7.26015): starting
10:53:10 (3044361): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 10:53:10] Arguments: --nthreads 12
[2025-06-03 10:53:10] Threads: 12
[2025-06-03 10:53:10] Checking for CVMFS
[2025-06-03 10:53:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 10:53:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 10:53:11] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 10:53:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 10:53:12] 2.11.5.0 506603 22105 227076 146750 2 438 26538630 45568000 22371 130560 0 240174106 99.828 133314495 27216 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 10:53:12] CVMFS is ok
[2025-06-03 10:53:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 10:53:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 10:53:12] Further information can be found at the LHC@home message board.
[2025-06-03 10:53:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 10:53:12] Checking for apptainer binary...
[2025-06-03 10:53:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 10:53:12] Running /usr/bin/apptainer --version
[2025-06-03 10:53:12] apptainer version 1.4.0-1.el9
[2025-06-03 10:53:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 10:53:13] wns0045.triumf.lcg
[2025-06-03 10:53:13] apptainer works
[2025-06-03 10:53:13] Set ATHENA_PROC_NUMBER=12
[2025-06-03 10:53:13] Set ATHENA_CORE_NUMBER=12
[2025-06-03 10:53:13] Starting ATLAS job with PandaID=6677783104
[2025-06-03 10:53:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 10:58:28]  *** The last 200 lines of the pilot log: ***
[2025-06-03 10:58:28] 2025-06-03 17:58:10,815 | INFO     | extracted standard info from prmon json
[2025-06-03 10:58:28] 2025-06-03 17:58:10,815 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 10:58:28] 2025-06-03 17:58:10,815 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 10:58:28] 2025-06-03 17:58:10,815 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 10:58:28] 2025-06-03 17:58:10,815 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | WARNING  | wrong length of table data, x=[1748973317.0], y=[22564.0] (must be same and length>=4)
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | INFO     | ..............................
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | INFO     | . Timing measurements:
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | INFO     | . get job = 0 s
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | INFO     | . initial setup = 4 s
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | INFO     | . payload setup = 33 s
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | INFO     | . stage-in = 0 s
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | INFO     | . payload execution = 52 s
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | INFO     | . stage-out = 1 s
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | INFO     | . log creation = 0 s
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | INFO     | ..............................
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677783104/pilotlog.txt
[2025-06-03 10:58:28] 2025-06-03 17:58:10,828 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 10:58:28] - Log from pilotlog.txt -
[2025-06-03 10:58:28] 2025-06-03 17:58:10,814 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 10:58:28] 2025-06-03 17:58:10,814 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677783104/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 10:58:28] 2025-06-03 17:58:10,815 | INFO     | extracted standard info from prmon json
[2025-06-03 10:58:28] 2025-06-03 17:58:10,815 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 10:58:28] 2025-06-03 17:58:10,815 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 10:58:28] 2025-06-03 17:58:10,815 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 10:58:28] 2025-06-03 17:58:10,815 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | WARNING  | wrong length of table data, x=[1748973317.0], y=[22564.0] (must be same and length>=4)
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | INFO     | ..............................
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | INFO     | . Timing measurements:
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | INFO     | . get job = 0 s
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | INFO     | . initial setup = 4 s
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | INFO     | . payload setup = 33 s
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | INFO     | . stage-in = 0 s
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | INFO     | . payload execution = 52 s
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | INFO     | . stage-out = 1 s
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | INFO     | . log creation = 0 s
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | INFO     | ..............................
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677783104/pilotlog.txt
[2025-06-03 10:58:28] 2025-06-03 17:58:10,829 | WARNING  | 
[2025-06-03 10:58:28] [begin log extracts]
[2025-06-03 10:58:28] - Log from pilotlog.txt -
[2025-06-03 10:58:28] 2025-06-03 17:58:10,814 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 10:58:28] 2025-06-03 17:58:10,814 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677783104/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 10:58:28] 2025-06-03 17:58:10,815 | INFO     | extracted standard info from prmon json
[2025-06-03 10:58:28] 2025-06-03 17:58:10,815 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 10:58:28] 2025-06-03 17:58:10,815 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 10:58:28] 2025-06-03 17:58:10,815 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 10:58:28] 2025-06-03 17:58:10,815 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | WARNING  | wrong length of table data, x=[1748973317.0], y=[22564.0] (must be same and length>=4)
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | INFO     | ..............................
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | INFO     | . Timing measurements:
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | INFO     | . get job = 0 s
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | INFO     | . initial setup = 4 s
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | INFO     | . payload setup = 33 s
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | INFO     | . stage-in = 0 s
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | INFO     | . payload execution = 52 s
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | INFO     | . stage-out = 1 s
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | INFO     | . log creation = 0 s
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | INFO     | ..............................
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 10:58:28] 2025-06-03 17:58:10,816 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677783104/pilotlog.txt
[2025-06-03 10:58:28] [end log extracts]
[2025-06-03 10:58:28] 2025-06-03 17:58:10,829 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 10:58:28] 2025-06-03 17:58:10,830 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 10:58:28] 2025-06-03 17:58:10,887 | INFO     | 
[2025-06-03 10:58:28] 2025-06-03 17:58:10,888 | INFO     | job summary report
[2025-06-03 10:58:28] 2025-06-03 17:58:10,888 | INFO     | --------------------------------------------------
[2025-06-03 10:58:28] 2025-06-03 17:58:10,888 | INFO     | PanDA job id: 6677783104
[2025-06-03 10:58:28] 2025-06-03 17:58:10,888 | INFO     | task id: 45006595
[2025-06-03 10:58:28] 2025-06-03 17:58:10,888 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 10:55:45,759 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 10:58:28] 2025-06-03 17:58:10,888 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 10:58:28] 2025-06-03 17:58:10,888 | INFO     | pilot state: failed 
[2025-06-03 10:58:28] 2025-06-03 17:58:10,888 | INFO     | transexitcode: 65
[2025-06-03 10:58:28] 2025-06-03 17:58:10,888 | INFO     | exeerrorcode: 65
[2025-06-03 10:58:28] 2025-06-03 17:58:10,888 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 10:58:28] 2025-06-03 17:58:10,888 | INFO     | exitcode: 65
[2025-06-03 10:58:28] 2025-06-03 17:58:10,888 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 10:58:28] 2025-06-03 17:58:10,888 | INFO     | cpuconsumptiontime: 17 s
[2025-06-03 10:58:28] 2025-06-03 17:58:10,888 | INFO     | nevents: 0
[2025-06-03 10:58:28] 2025-06-03 17:58:10,888 | INFO     | neventsw: 0
[2025-06-03 10:58:28] 2025-06-03 17:58:10,888 | INFO     | pid: 3074330
[2025-06-03 10:58:28] 2025-06-03 17:58:10,888 | INFO     | pgrp: 3074330
[2025-06-03 10:58:28] 2025-06-03 17:58:10,888 | INFO     | corecount: 12
[2025-06-03 10:58:28] 2025-06-03 17:58:10,888 | INFO     | event service: False
[2025-06-03 10:58:28] 2025-06-03 17:58:10,888 | INFO     | sizes: {0: 2404954, 1: 2405209, 2: 2405209, 13: 2405237, 20: 2405499, 23: 2405527, 91: 2428836, 93: 2433099, 226: 2433213}
[2025-06-03 10:58:28] 2025-06-03 17:58:10,888 | INFO     | --------------------------------------------------
[2025-06-03 10:58:28] 2025-06-03 17:58:10,889 | INFO     | 
[2025-06-03 10:58:28] 2025-06-03 17:58:10,889 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 10:58:28] 2025-06-03 17:58:10,904 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 10:58:28] 2025-06-03 17:58:10,904 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 10:58:28] 2025-06-03 17:58:10,905 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 10:58:28] 2025-06-03 17:58:10,905 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 10:58:28] 2025-06-03 17:58:10,905 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 10:58:28] 2025-06-03 17:58:10,905 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 10:58:28] 2025-06-03 17:58:10,905 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 10:58:28] 2025-06-03 17:58:10,905 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 10:58:28] 2025-06-03 17:58:10,905 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 10:58:28] 2025-06-03 17:58:10,905 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 10:58:28] 2025-06-03 17:58:10,905 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 10:58:28] 2025-06-03 17:58:10,905 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 10:58:28] 2025-06-03 17:58:10,905 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 10:58:28] 2025-06-03 17:58:10,905 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 10:58:28] 2025-06-03 17:58:10,905 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 10:58:28] 2025-06-03 17:58:10,905 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 10:58:28] 2025-06-03 17:58:10,905 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 10:58:28] 2025-06-03 17:58:10,905 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 10:58:28] 2025-06-03 17:58:10,905 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 10:58:28] 2025-06-03 17:58:10,905 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 10:58:28] 2025-06-03 17:58:10,905 | INFO     | job 6677783104 has completed (purged errors)
[2025-06-03 10:58:28] 2025-06-03 17:58:10,906 | INFO     | overall cleanup function is called
[2025-06-03 10:58:28] 2025-06-03 17:58:11,914 | INFO     | --- collectZombieJob: --- 10, [3074330]
[2025-06-03 10:58:28] 2025-06-03 17:58:11,914 | INFO     | zombie collector waiting for pid 3074330
[2025-06-03 10:58:28] 2025-06-03 17:58:11,914 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 10:58:28] 2025-06-03 17:58:11,914 | INFO     | collected zombie processes
[2025-06-03 10:58:28] 2025-06-03 17:58:11,914 | INFO     | will attempt to kill all subprocesses of pid=3074330
[2025-06-03 10:58:28] 2025-06-03 17:58:12,592 | INFO     | process IDs to be killed: [3074330] (in reverse order)
[2025-06-03 10:58:28] 2025-06-03 17:58:12,960 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 10:58:28] 2025-06-03 17:58:12,961 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 10:58:28] 2025-06-03 17:58:12,995 | INFO     | did not find any defunct processes belonging to 3074330
[2025-06-03 10:58:28] 2025-06-03 17:58:13,010 | INFO     | did not find any defunct processes belonging to 3074330
[2025-06-03 10:58:28] 2025-06-03 17:58:13,010 | INFO     | ready for new job
[2025-06-03 10:58:28] 2025-06-03 17:58:13,011 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 10:58:28] 2025-06-03 17:58:13,012 | INFO     | **************************************
[2025-06-03 10:58:28] 2025-06-03 17:58:13,012 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 10:58:28] 2025-06-03 17:58:13,012 | INFO     | **************************************
[2025-06-03 10:58:28] 2025-06-03 17:58:13,012 | INFO     | 
[2025-06-03 10:58:28] 2025-06-03 17:58:13,018 | INFO     | architecture information:
[2025-06-03 10:58:28] 2025-06-03 17:58:13,026 | INFO     | executing command: cat /etc/os-release
[2025-06-03 10:58:28] 2025-06-03 17:58:13,096 | INFO     | cat /etc/os-release:
[2025-06-03 10:58:28] NAME="CentOS Linux"
[2025-06-03 10:58:28] VERSION="7 (Core)"
[2025-06-03 10:58:28] ID="centos"
[2025-06-03 10:58:28] ID_LIKE="rhel fedora"
[2025-06-03 10:58:28] VERSION_ID="7"
[2025-06-03 10:58:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 10:58:28] ANSI_COLOR="0;31"
[2025-06-03 10:58:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 10:58:28] HOME_URL="https://www.centos.org/"
[2025-06-03 10:58:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 10:58:28] 
[2025-06-03 10:58:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 10:58:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 10:58:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 10:58:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 10:58:28] 
[2025-06-03 10:58:28] 2025-06-03 17:58:13,096 | INFO     | **************************************
[2025-06-03 10:58:28] 2025-06-03 17:58:13,600 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 10:58:28] 2025-06-03 17:58:13,683 | INFO     | sufficient remaining disk space (1000296415232 B)
[2025-06-03 10:58:28] 2025-06-03 17:58:13,684 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 10:58:28] 2025-06-03 17:58:13,684 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 10:58:28] 2025-06-03 17:58:13,684 | INFO     | update_server=False
[2025-06-03 10:58:28] 2025-06-03 17:58:13,684 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 10:58:28] 2025-06-03 17:58:13,720 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 10:58:28] 2025-06-03 17:58:13,721 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 10:58:28] 2025-06-03 17:58:13,721 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 10:58:28] 2025-06-03 17:58:13,721 | INFO     | will abort loop
[2025-06-03 10:58:28] 2025-06-03 17:58:13,764 | INFO     | all job control threads have been joined
[2025-06-03 10:58:28] 2025-06-03 17:58:13,859 | INFO     | all data control threads have been joined
[2025-06-03 10:58:28] 2025-06-03 17:58:14,066 | INFO     | all payload control threads have been joined
[2025-06-03 10:58:28] 2025-06-03 17:58:14,130 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 10:58:28] 2025-06-03 17:58:14,552 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 10:58:28] 2025-06-03 17:58:14,552 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 10:58:28] 2025-06-03 17:58:14,552 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 10:58:28] 2025-06-03 17:58:14,690 | INFO     | [job] retrieve thread has finished
[2025-06-03 10:58:28] 2025-06-03 17:58:14,727 | INFO     | [job] job monitor thread has finished
[2025-06-03 10:58:28] 2025-06-03 17:58:14,770 | INFO     | [job] control thread has finished
[2025-06-03 10:58:28] 2025-06-03 17:58:14,822 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 10:58:28] 2025-06-03 17:58:14,865 | INFO     | [data] control thread has finished
[2025-06-03 10:58:28] 2025-06-03 17:58:15,002 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 10:58:28] 2025-06-03 17:58:15,072 | INFO     | [payload] control thread has finished
[2025-06-03 10:58:28] 2025-06-03 17:58:15,328 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 10:58:28] 2025-06-03 17:58:15,410 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 10:58:28] 2025-06-03 17:58:15,598 | INFO     | [payload] validate_post thread has finished
[2025-06-03 10:58:28] 2025-06-03 17:58:15,871 | INFO     | [data] copytool_in thread has finished
[2025-06-03 10:58:28] 2025-06-03 17:58:15,897 | INFO     | [job] validate thread has finished
[2025-06-03 10:58:28] 2025-06-03 17:58:15,911 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 10:58:28] 2025-06-03 17:58:15,923 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 10:58:28] 2025-06-03 17:58:16,106 | INFO     | [payload] failed_post thread has finished
[2025-06-03 10:58:28] 2025-06-03 17:58:16,148 | INFO     | [data] copytool_out thread has finished
[2025-06-03 10:58:28] 2025-06-03 17:58:16,917 | INFO     | [job] queue monitor thread has finished
[2025-06-03 10:58:28] 2025-06-03 17:58:19,337 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 10:58:28] 2025-06-03 17:58:21,135 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139903921882944)>', '<ExcThread(monitor, started 139903383889664)>']
[2025-06-03 10:58:28] 2025-06-03 17:58:21,595 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 10:58:28] 2025-06-03 17:58:21,595 | INFO     | [monitor] control thread has ended
[2025-06-03 10:58:28] 2025-06-03 17:58:26,161 | INFO     | all workflow threads have been joined
[2025-06-03 10:58:28] 2025-06-03 17:58:26,161 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 10:58:28] 2025-06-03 17:58:26,161 | INFO     | traces error code: 0
[2025-06-03 10:58:28] 2025-06-03 17:58:26,162 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 10:58:28] 2025-06-03 17:58:26,903 [wrapper] ==== pilot stdout END ====
[2025-06-03 10:58:28] 2025-06-03 17:58:26,942 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 10:58:28] 2025-06-03 17:58:26,970 [wrapper] pilotpid: 3056518
[2025-06-03 10:58:28] 2025-06-03 17:58:27,010 [wrapper] Pilot exit status: 0
[2025-06-03 10:58:28] 2025-06-03 17:58:27,137 [wrapper] pandaids: 6677783104
[2025-06-03 10:58:28] 2025-06-03 17:58:27,597 [wrapper] cleanup supervisor_pilot 3056530 3056519
[2025-06-03 10:58:28] 2025-06-03 17:58:27,604 [wrapper] Test setup, not cleaning
[2025-06-03 10:58:28] 2025-06-03 17:58:27,615 [wrapper] apfmon messages muted
[2025-06-03 10:58:28] 2025-06-03 17:58:27,638 [wrapper] ==== wrapper stdout END ====
[2025-06-03 10:58:28] 2025-06-03 17:58:27,657 [wrapper] ==== wrapper stderr END ====
[2025-06-03 10:58:28]  *** Error codes and diagnostics ***
[2025-06-03 10:58:28]     "exeErrorCode": 65,
[2025-06-03 10:58:28]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 10:58:28]     "pilotErrorCode": 1305,
[2025-06-03 10:58:28]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 10:58:28]  *** Listing of results directory ***
[2025-06-03 10:58:28] total 215828
[2025-06-03 10:58:28] -rwx------. 1 boinc boinc     37140 Jun  3 09:42 runpilot2-wrapper.sh
[2025-06-03 10:58:28] -rw-r--r--. 1 boinc boinc      5111 Jun  3 09:42 queuedata.json
[2025-06-03 10:58:28] -rw-r--r--. 1 boinc boinc    495897 Jun  3 09:42 pilot3.tar.gz
[2025-06-03 10:58:28] -rw-r--r--. 1 boinc boinc       100 Jun  3 10:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 10:58:28] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 10:53 run_atlas
[2025-06-03 10:58:28] -rw-r--r--. 1 boinc boinc       105 Jun  3 10:53 job.xml
[2025-06-03 10:58:28] -rw-r--r--. 1 boinc boinc      6601 Jun  3 10:53 init_data.xml
[2025-06-03 10:58:28] -rw-r--r--. 2 boinc boinc 216968742 Jun  3 10:53 EVNT.45006593._001567.pool.root.1
[2025-06-03 10:58:28] -rw-r--r--. 2 boinc boinc     15093 Jun  3 10:53 start_atlas.sh
[2025-06-03 10:58:28] drwxrwx--x. 2 boinc boinc      4096 Jun  3 10:53 shared
[2025-06-03 10:58:28] -rw-r--r--. 2 boinc boinc    508876 Jun  3 10:53 input.tar.gz
[2025-06-03 10:58:28] -rw-r--r--. 1 boinc boinc         0 Jun  3 10:53 boinc_lockfile
[2025-06-03 10:58:28] -rw-r--r--. 1 boinc boinc      2525 Jun  3 10:53 pandaJob.out
[2025-06-03 10:58:28] -rw-------. 1 boinc boinc    985078 Jun  3 10:53 agis_schedconf.cvmfs.json
[2025-06-03 10:58:28] -rw-------. 1 boinc boinc   1603667 Jun  3 10:53 agis_ddmendpoints.agis.ALL.json
[2025-06-03 10:58:28] drwx------. 4 boinc boinc      4096 Jun  3 10:53 pilot3
[2025-06-03 10:58:28] -rw-------. 1 boinc boinc       963 Jun  3 10:55 memory_monitor_summary.json
[2025-06-03 10:58:28] -rw-------. 1 boinc boinc     20848 Jun  3 10:55 log.45006595._039068.job.log.tgz.1
[2025-06-03 10:58:28] -rw-------. 1 boinc boinc        95 Jun  3 10:57 pilot_heartbeat.json
[2025-06-03 10:58:28] -rw-------. 1 boinc boinc      8335 Jun  3 10:58 heartbeat.json
[2025-06-03 10:58:28] -rw-------. 1 boinc boinc      4538 Jun  3 10:58 pilotlog.txt
[2025-06-03 10:58:28] -rw-r--r--. 1 boinc boinc      8192 Jun  3 10:58 boinc_mmap_file
[2025-06-03 10:58:28] -rw-r--r--. 1 boinc boinc        22 Jun  3 10:58 wrapper_checkpoint.txt
[2025-06-03 10:58:28] -rw-------. 1 boinc boinc     79928 Jun  3 10:58 log.45006595._039068.job.log.1
[2025-06-03 10:58:28] -rw-------. 1 boinc boinc       188 Jun  3 10:58 output.list
[2025-06-03 10:58:28] -rw-r--r--. 1 boinc boinc       620 Jun  3 10:58 runtime_log
[2025-06-03 10:58:28] -rw-------. 1 boinc boinc    122880 Jun  3 10:58 result.tar.gz
[2025-06-03 10:58:28] -rw-r--r--. 1 boinc boinc      8484 Jun  3 10:58 runtime_log.err
[2025-06-03 10:58:28] -rw-------. 1 boinc boinc       645 Jun  3 10:58 GzQNDmUtjg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmTIZKDme6UWJo.diag
[2025-06-03 10:58:28] -rw-r--r--. 1 boinc boinc       524 Jun  3 10:58 boinc_task_state.xml
[2025-06-03 10:58:28] -rw-r--r--. 1 boinc boinc     21631 Jun  3 10:58 stderr.txt
[2025-06-03 10:58:28] No HITS result produced
[2025-06-03 10:58:28]  *** Contents of shared directory: ***
[2025-06-03 10:58:28] total 212524
[2025-06-03 10:58:28] -rw-r--r--. 2 boinc boinc 216968742 Jun  3 10:53 ATLAS.root_0
[2025-06-03 10:58:28] -rw-r--r--. 2 boinc boinc     15093 Jun  3 10:53 start_atlas.sh
[2025-06-03 10:58:28] -rw-r--r--. 2 boinc boinc    508876 Jun  3 10:53 input.tar.gz
[2025-06-03 10:58:28] -rw-------. 1 boinc boinc    122880 Jun  3 10:58 result.tar.gz
10:58:29 (3044361): run_atlas exited; CPU time 27.669360
10:58:29 (3044361): called boinc_finish(0)

</stderr_txt>
]]>

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