Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:45:09 (3951044): wrapper (7.7.26015): starting
13:45:09 (3951044): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 13:45:09] Arguments: --nthreads 8
[2025-06-03 13:45:09] Threads: 8
[2025-06-03 13:45:09] Checking for CVMFS
[2025-06-03 13:45:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:45:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:45:09] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:45:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:45:09] 2.12.6.0 551375 177880 293788 146750 1 196 31832516 32935936 4104 130560 1 370469818 99.657 340836120 26769 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 13:45:09] CVMFS is ok
[2025-06-03 13:45:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 13:45:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 13:45:09] Further information can be found at the LHC@home message board.
[2025-06-03 13:45:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:45:09] Checking for apptainer binary...
[2025-06-03 13:45:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:45:09] Running /usr/bin/apptainer --version
[2025-06-03 13:45:09] apptainer version 1.4.1-1.el9
[2025-06-03 13:45:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:45:09] c-4-40.aglt2.org
[2025-06-03 13:45:09] apptainer works
[2025-06-03 13:45:10] Set ATHENA_PROC_NUMBER=8
[2025-06-03 13:45:10] Set ATHENA_CORE_NUMBER=8
[2025-06-03 13:45:10] Starting ATLAS job with PandaID=6677676653
[2025-06-03 13:45:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 17:03:21]  *** The last 200 lines of the pilot log: ***
[2025-06-03 17:03:21] 2025-06-03 20:35:17,600 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 17:03:21] 2025-06-03 20:35:17,601 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6677676653/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 17:03:21] 2025-06-03 20:35:17,602 | INFO     | extracted standard info from prmon json
[2025-06-03 17:03:21] 2025-06-03 20:35:17,602 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 17:03:21] 2025-06-03 20:35:17,602 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 17:03:21] 2025-06-03 20:35:17,603 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 17:03:21] 2025-06-03 20:35:17,603 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 17:03:21] 2025-06-03 20:35:17,607 | INFO     | fitting pss+swap vs Time
[2025-06-03 17:03:21] 2025-06-03 20:35:17,608 | INFO     | sum of square deviations: 1444161105.4012022
[2025-06-03 17:03:21] 2025-06-03 20:35:17,609 | INFO     | sum of deviations: 13790884064.17967
[2025-06-03 17:03:21] 2025-06-03 20:35:17,609 | INFO     | mean x: 1748977806.0598803
[2025-06-03 17:03:21] 2025-06-03 20:35:17,609 | INFO     | mean y: 2011470.9820359282
[2025-06-03 17:03:21] 2025-06-03 20:35:17,609 | INFO     | -- intersect: -16699691728.18726
[2025-06-03 17:03:21] 2025-06-03 20:35:17,609 | INFO     | intersect: -16699691728.18726
[2025-06-03 17:03:21] 2025-06-03 20:35:17,609 | INFO     | chi2: 4.212546933031047
[2025-06-03 17:03:21] 2025-06-03 20:35:17,610 | INFO     | sum of square deviations: 1318292027.8827162
[2025-06-03 17:03:21] 2025-06-03 20:35:17,611 | INFO     | sum of deviations: 29952164428.518555
[2025-06-03 17:03:21] 2025-06-03 20:35:17,611 | INFO     | mean x: 1748977653.5617285
[2025-06-03 17:03:21] 2025-06-03 20:35:17,611 | INFO     | mean y: 2030891.148148148
[2025-06-03 17:03:21] 2025-06-03 20:35:17,611 | INFO     | -- intersect: -39735497026.25956
[2025-06-03 17:03:21] 2025-06-03 20:35:17,611 | INFO     | intersect: -39735497026.25956
[2025-06-03 17:03:21] 2025-06-03 20:35:17,612 | INFO     | chi2: 3.4218723301472647
[2025-06-03 17:03:21] 2025-06-03 20:35:17,612 | INFO     | current chi2=3.4218723301472647 (change=18.769514392445462 %)
[2025-06-03 17:03:21] 2025-06-03 20:35:17,612 | INFO     | right removable region: 161
[2025-06-03 17:03:21] 2025-06-03 20:35:17,612 | INFO     | sum of square deviations: 1318285927.8827162
[2025-06-03 17:03:21] 2025-06-03 20:35:17,613 | INFO     | sum of deviations: -17820283903.728394
[2025-06-03 17:03:21] 2025-06-03 20:35:17,613 | INFO     | mean x: 1748977958.5617285
[2025-06-03 17:03:21] 2025-06-03 20:35:17,613 | INFO     | mean y: 2049610.172839506
[2025-06-03 17:03:21] 2025-06-03 20:35:17,614 | INFO     | -- intersect: 23644328651.253654
[2025-06-03 17:03:21] 2025-06-03 20:35:17,614 | INFO     | intersect: 23644328651.253654
[2025-06-03 17:03:21] 2025-06-03 20:35:17,614 | INFO     | chi2: 1.8694989098621528
[2025-06-03 17:03:21] 2025-06-03 20:35:17,614 | INFO     | current chi2=1.8694989098621528 (change=55.620698366510645 %)
[2025-06-03 17:03:21] 2025-06-03 20:35:17,614 | INFO     | sum of square deviations: 1199945775.3630538
[2025-06-03 17:03:21] 2025-06-03 20:35:17,615 | INFO     | sum of deviations: -37167374508.87262
[2025-06-03 17:03:21] 2025-06-03 20:35:17,615 | INFO     | mean x: 1748978111.0636942
[2025-06-03 17:03:21] 2025-06-03 20:35:17,616 | INFO     | mean y: 2074453.9872611465
[2025-06-03 17:03:21] 2025-06-03 20:35:17,616 | INFO     | -- intersect: 54175292774.671074
[2025-06-03 17:03:21] 2025-06-03 20:35:17,616 | INFO     | intersect: 54175292774.671074
[2025-06-03 17:03:21] 2025-06-03 20:35:17,616 | INFO     | chi2: 0.9406162620500635
[2025-06-03 17:03:21] 2025-06-03 20:35:17,616 | INFO     | current chi2=0.9406162620500635 (change=49.68618290772795 %)
[2025-06-03 17:03:21] 2025-06-03 20:35:17,617 | INFO     | sum of square deviations: 1088908085.3421052
[2025-06-03 17:03:21] 2025-06-03 20:35:17,617 | INFO     | sum of deviations: -34309862558.302635
[2025-06-03 17:03:21] 2025-06-03 20:35:17,618 | INFO     | mean x: 1748978263.5657895
[2025-06-03 17:03:21] 2025-06-03 20:35:17,618 | INFO     | mean y: 2070441.980263158
[2025-06-03 17:03:21] 2025-06-03 20:35:17,618 | INFO     | -- intersect: 55109755514.91129
[2025-06-03 17:03:21] 2025-06-03 20:35:17,618 | INFO     | intersect: 55109755514.91129
[2025-06-03 17:03:21] 2025-06-03 20:35:17,618 | INFO     | chi2: 0.9090092987399125
[2025-06-03 17:03:21] 2025-06-03 20:35:17,618 | INFO     | current chi2=0.9090092987399125 (change=3.360239939001687 %)
[2025-06-03 17:03:21] 2025-06-03 20:35:17,618 | INFO     | left removable region: 30
[2025-06-03 17:03:21] 2025-06-03 20:35:17,619 | INFO     | sum of square deviations: 697051527.2366428
[2025-06-03 17:03:21] 2025-06-03 20:35:17,620 | INFO     | sum of deviations: -11618496515.86261
[2025-06-03 17:03:21] 2025-06-03 20:35:17,620 | INFO     | mean x: 1748978538.076336
[2025-06-03 17:03:21] 2025-06-03 20:35:17,620 | INFO     | mean y: 2087175.786259542
[2025-06-03 17:03:21] 2025-06-03 20:35:17,620 | INFO     | -- intersect: 29154165977.644703
[2025-06-03 17:03:21] 2025-06-03 20:35:17,620 | INFO     | intersect: 29154165977.644703
[2025-06-03 17:03:21] 2025-06-03 20:35:17,620 | INFO     | chi2: 0.0981287444331109
[2025-06-03 17:03:21] 2025-06-03 20:35:17,621 | INFO     | -- intersect: 29154165977.644703
[2025-06-03 17:03:21] 2025-06-03 20:35:17,621 | INFO     | current memory leak: -16.67 B/s (using 131 data points, chi2=0.10)
[2025-06-03 17:03:21] 2025-06-03 20:35:17,621 | INFO     | ..............................
[2025-06-03 17:03:21] 2025-06-03 20:35:17,622 | INFO     | . Timing measurements:
[2025-06-03 17:03:21] 2025-06-03 20:35:17,622 | INFO     | . get job = 0 s
[2025-06-03 17:03:21] 2025-06-03 20:35:17,622 | INFO     | . initial setup = 2 s
[2025-06-03 17:03:21] 2025-06-03 20:35:17,622 | INFO     | . payload setup = 5 s
[2025-06-03 17:03:21] 2025-06-03 20:35:17,622 | INFO     | . stage-in = 0 s
[2025-06-03 17:03:21] 2025-06-03 20:35:17,622 | INFO     | . payload execution = 10157 s
[2025-06-03 17:03:21] 2025-06-03 20:35:17,622 | INFO     | . stage-out = 2 s
[2025-06-03 17:03:21] 2025-06-03 20:35:17,622 | INFO     | . log creation = 0 s
[2025-06-03 17:03:21] 2025-06-03 20:35:17,622 | INFO     | ..............................
[2025-06-03 17:03:21] 2025-06-03 20:35:17,773 | INFO     | 
[2025-06-03 17:03:21] 2025-06-03 20:35:17,775 | INFO     | job summary report
[2025-06-03 17:03:21] 2025-06-03 20:35:17,775 | INFO     | --------------------------------------------------
[2025-06-03 17:03:21] 2025-06-03 20:35:17,775 | INFO     | PanDA job id: 6677676653
[2025-06-03 17:03:21] 2025-06-03 20:35:17,775 | INFO     | task id: 45006595
[2025-06-03 17:03:21] 2025-06-03 20:35:17,775 | INFO     | errors: (none)
[2025-06-03 17:03:21] 2025-06-03 20:35:17,775 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 17:03:21] 2025-06-03 20:35:17,776 | INFO     | pilot state: finished 
[2025-06-03 17:03:21] 2025-06-03 20:35:17,776 | INFO     | transexitcode: 0
[2025-06-03 17:03:21] 2025-06-03 20:35:17,776 | INFO     | exeerrorcode: 0
[2025-06-03 17:03:21] 2025-06-03 20:35:17,776 | INFO     | exeerrordiag: 
[2025-06-03 17:03:21] 2025-06-03 20:35:17,783 | INFO     | exitcode: 0
[2025-06-03 17:03:21] 2025-06-03 20:35:17,783 | INFO     | exitmsg: OK
[2025-06-03 17:03:21] 2025-06-03 20:35:17,783 | INFO     | cpuconsumptiontime: 39659 s
[2025-06-03 17:03:21] 2025-06-03 20:35:17,783 | INFO     | nevents: 400
[2025-06-03 17:03:21] 2025-06-03 20:35:17,784 | INFO     | neventsw: 0
[2025-06-03 17:03:21] 2025-06-03 20:35:17,784 | INFO     | pid: 3961052
[2025-06-03 17:03:21] 2025-06-03 20:35:17,784 | INFO     | pgrp: 3961052
[2025-06-03 17:03:21] 2025-06-03 20:35:17,784 | INFO     | corecount: 8
[2025-06-03 17:03:21] 2025-06-03 20:35:17,784 | INFO     | event service: False
[2025-06-03 17:03:21] 2025-06-03 20:35:17,784 | INFO     | sizes: {0: 2405013, 1: 2405212, 5: 2405418, 12: 2405474, 10167: 2434087, 10170: 2443028, 10172: 2443240, 10184: 2443410}
[2025-06-03 17:03:21] 2025-06-03 20:35:17,784 | INFO     | --------------------------------------------------
[2025-06-03 17:03:21] 2025-06-03 20:35:17,784 | INFO     | 
[2025-06-03 17:03:21] 2025-06-03 20:35:17,784 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-03 17:03:21] 2025-06-03 20:35:18,020 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 20:35:18,021 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 20:35:18,021 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 20:35:18,021 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 20:35:18,021 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 20:35:18,021 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 20:35:18,021 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 20:35:18,021 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 20:35:18,021 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 20:35:18,022 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 20:35:18,022 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 20:35:18,022 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 20:35:18,022 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 20:35:18,022 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 20:35:18,022 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 20:35:18,022 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 20:35:18,022 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 20:35:18,022 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 17:03:21] 2025-06-03 20:35:18,022 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 20:35:18,023 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 17:03:21] 2025-06-03 20:35:18,023 | INFO     | job 6677676653 has completed (purged errors)
[2025-06-03 17:03:21] 2025-06-03 20:35:18,027 | INFO     | overall cleanup function is called
[2025-06-03 17:03:21] 2025-06-03 20:35:19,044 | INFO     | --- collectZombieJob: --- 10, [3961052]
[2025-06-03 17:03:21] 2025-06-03 20:35:19,045 | INFO     | zombie collector waiting for pid 3961052
[2025-06-03 17:03:21] 2025-06-03 20:35:19,045 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 17:03:21] 2025-06-03 20:35:19,045 | INFO     | collected zombie processes
[2025-06-03 17:03:21] 2025-06-03 20:35:19,045 | INFO     | will attempt to kill all subprocesses of pid=3961052
[2025-06-03 17:03:21] 2025-06-03 20:35:19,469 | INFO     | process IDs to be killed: [3961052] (in reverse order)
[2025-06-03 17:03:21] 2025-06-03 20:35:19,575 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 17:03:21] 2025-06-03 20:35:19,575 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 17:03:21] 2025-06-03 20:35:19,588 | INFO     | did not find any defunct processes belonging to 3961052
[2025-06-03 17:03:21] 2025-06-03 20:35:19,601 | INFO     | did not find any defunct processes belonging to 3961052
[2025-06-03 17:03:21] 2025-06-03 20:35:19,602 | INFO     | ready for new job
[2025-06-03 17:03:21] 2025-06-03 20:35:19,602 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 17:03:21] 2025-06-03 20:35:19,604 | INFO     | **************************************
[2025-06-03 17:03:21] 2025-06-03 20:35:19,604 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 17:03:21] 2025-06-03 20:35:19,604 | INFO     | **************************************
[2025-06-03 17:03:21] 2025-06-03 20:35:19,604 | INFO     | 
[2025-06-03 17:03:21] 2025-06-03 20:35:19,618 | INFO     | architecture information:
[2025-06-03 17:03:21] 2025-06-03 20:35:19,619 | INFO     | executing command: cat /etc/os-release
[2025-06-03 17:03:21] 2025-06-03 20:35:19,634 | INFO     | cat /etc/os-release:
[2025-06-03 17:03:21] NAME="CentOS Linux"
[2025-06-03 17:03:21] VERSION="7 (Core)"
[2025-06-03 17:03:21] ID="centos"
[2025-06-03 17:03:21] ID_LIKE="rhel fedora"
[2025-06-03 17:03:21] VERSION_ID="7"
[2025-06-03 17:03:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 17:03:21] ANSI_COLOR="0;31"
[2025-06-03 17:03:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 17:03:21] HOME_URL="https://www.centos.org/"
[2025-06-03 17:03:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 17:03:21] 
[2025-06-03 17:03:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 17:03:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 17:03:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 17:03:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 17:03:21] 
[2025-06-03 17:03:21] 2025-06-03 20:35:19,635 | INFO     | **************************************
[2025-06-03 17:03:21] 2025-06-03 20:35:20,137 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-03 17:03:21] 2025-06-03 20:35:20,252 | INFO     | sufficient remaining disk space (74102865920 B)
[2025-06-03 17:03:21] 2025-06-03 20:35:20,254 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 17:03:21] 2025-06-03 20:35:20,255 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 17:03:21] 2025-06-03 20:35:20,255 | INFO     | update_server=False
[2025-06-03 17:03:21] 2025-06-03 20:35:20,255 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 17:03:21] 2025-06-03 20:35:20,268 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 17:03:21] 2025-06-03 20:35:20,594 | INFO     | all data control threads have been joined
[2025-06-03 17:03:21] 2025-06-03 20:35:21,109 | INFO     | all job control threads have been joined
[2025-06-03 17:03:21] 2025-06-03 20:35:21,145 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:03:21] 2025-06-03 20:35:21,145 | INFO     | aborting loop
[2025-06-03 17:03:21] 2025-06-03 20:35:21,151 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 17:03:21] 2025-06-03 20:35:21,152 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 17:03:21] 2025-06-03 20:35:21,152 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 17:03:21] 2025-06-03 20:35:21,281 | INFO     | [job] retrieve thread has finished
[2025-06-03 17:03:21] 2025-06-03 20:35:21,423 | INFO     | [payload] validate_post thread has finished
[2025-06-03 17:03:21] 2025-06-03 20:35:21,469 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 17:03:21] 2025-06-03 20:35:21,588 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 17:03:21] 2025-06-03 20:35:21,600 | INFO     | [data] control thread has finished
[2025-06-03 17:03:21] 2025-06-03 20:35:21,601 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 17:03:21] 2025-06-03 20:35:21,711 | INFO     | all payload control threads have been joined
[2025-06-03 17:03:21] 2025-06-03 20:35:21,882 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 17:03:21] 2025-06-03 20:35:22,003 | INFO     | [job] validate thread has finished
[2025-06-03 17:03:21] 2025-06-03 20:35:22,121 | INFO     | [job] control thread has finished
[2025-06-03 17:03:21] 2025-06-03 20:35:22,151 | INFO     | [job] job monitor thread has finished
[2025-06-03 17:03:21] 2025-06-03 20:35:22,277 | INFO     | [data] copytool_out thread has finished
[2025-06-03 17:03:21] 2025-06-03 20:35:22,321 | INFO     | [payload] failed_post thread has finished
[2025-06-03 17:03:21] 2025-06-03 20:35:22,551 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 17:03:21] 2025-06-03 20:35:22,715 | INFO     | [data] copytool_in thread has finished
[2025-06-03 17:03:21] 2025-06-03 20:35:22,717 | INFO     | [payload] control thread has finished
[2025-06-03 17:03:21] 2025-06-03 20:35:22,811 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:03:21] 2025-06-03 20:35:23,822 | INFO     | [job] queue monitor thread has finished
[2025-06-03 17:03:21] 2025-06-03 20:35:25,484 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 17:03:21] 2025-06-03 20:35:26,353 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140340631615296)>', '<ExcThread(monitor, started 140339994158848)>']
[2025-06-03 17:03:21] 2025-06-03 20:35:27,195 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 17:03:21] 2025-06-03 20:35:27,195 | INFO     | [monitor] control thread has ended
[2025-06-03 17:03:21] 2025-06-03 20:35:31,378 | INFO     | all workflow threads have been joined
[2025-06-03 17:03:21] 2025-06-03 20:35:31,378 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 17:03:21] 2025-06-03 20:35:31,379 | INFO     | traces error code: 0
[2025-06-03 17:03:21] 2025-06-03 20:35:31,379 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 17:03:21] 2025-06-03 20:35:31,714 [wrapper] ==== pilot stdout END ====
[2025-06-03 17:03:21] 2025-06-03 20:35:31,776 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 17:03:21] 2025-06-03 20:35:31,796 [wrapper] pilotpid: 3954631
[2025-06-03 17:03:21] 2025-06-03 20:35:31,833 [wrapper] Pilot exit status: 0
[2025-06-03 17:03:21] 2025-06-03 20:35:31,978 [wrapper] pandaids: 6677676653
[2025-06-03 17:03:21] 2025-06-03 20:35:32,207 [wrapper] cleanup supervisor_pilot 1024442 3954632
[2025-06-03 17:03:21] 2025-06-03 20:35:32,231 [wrapper] Test setup, not cleaning
[2025-06-03 17:03:21] 2025-06-03 20:35:32,246 [wrapper] apfmon messages muted
[2025-06-03 17:03:21] 2025-06-03 20:35:32,269 [wrapper] ==== wrapper stdout END ====
[2025-06-03 17:03:21] 2025-06-03 20:35:32,287 [wrapper] ==== wrapper stderr END ====
[2025-06-03 17:03:21]  *** Error codes and diagnostics ***
[2025-06-03 17:03:21]     "exeErrorCode": 0,
[2025-06-03 17:03:21]     "exeErrorDiag": "",
[2025-06-03 17:03:21]     "pilotErrorCode": 0,
[2025-06-03 17:03:21]     "pilotErrorDiag": "",
[2025-06-03 17:03:21]  *** Listing of results directory ***
[2025-06-03 17:03:21] total 393628
[2025-06-03 17:03:21] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 10:52 pilot3.tar.gz
[2025-06-03 17:03:21] -rwx------. 1 boincer umatlas     37140 Jun  3 11:16 runpilot2-wrapper.sh
[2025-06-03 17:03:21] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 11:16 queuedata.json
[2025-06-03 17:03:21] -rw-r--r--. 1 boincer umatlas       100 Jun  3 13:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 17:03:21] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 13:45 run_atlas
[2025-06-03 17:03:21] -rw-r--r--. 1 boincer umatlas       105 Jun  3 13:45 job.xml
[2025-06-03 17:03:21] -rw-r--r--. 2 boincer umatlas 217305694 Jun  3 13:45 EVNT.45006593._001476.pool.root.1
[2025-06-03 17:03:21] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:45 start_atlas.sh
[2025-06-03 17:03:21] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 13:45 shared
[2025-06-03 17:03:21] -rw-r--r--. 2 boincer umatlas    508878 Jun  3 13:45 input.tar.gz
[2025-06-03 17:03:21] -rw-r--r--. 1 boincer umatlas         0 Jun  3 13:45 boinc_lockfile
[2025-06-03 17:03:21] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 13:45 pandaJob.out
[2025-06-03 17:03:21] -rw-------. 1 boincer umatlas    985078 Jun  3 13:45 agis_schedconf.cvmfs.json
[2025-06-03 17:03:21] -rw-------. 1 boincer umatlas   1603667 Jun  3 13:45 agis_ddmendpoints.agis.ALL.json
[2025-06-03 17:03:21] drwx------. 4 boincer umatlas      4096 Jun  3 13:45 pilot3
[2025-06-03 17:03:21] -rw-------. 1 boincer umatlas 179351517 Jun  3 16:34 HITS.45006595._036743.pool.root.1
[2025-06-03 17:03:21] -rw-r--r--. 1 boincer umatlas       529 Jun  3 16:34 boinc_task_state.xml
[2025-06-03 17:03:21] -rw-------. 1 boincer umatlas        95 Jun  3 16:34 pilot_heartbeat.json
[2025-06-03 17:03:21] -rw-------. 1 boincer umatlas      1038 Jun  3 16:34 memory_monitor_summary.json
[2025-06-03 17:03:21] -rw-------. 1 boincer umatlas    365073 Jun  3 16:35 log.45006595._036743.job.log.tgz.1
[2025-06-03 17:03:21] -rw-------. 1 boincer umatlas      7719 Jun  3 16:35 heartbeat.json
[2025-06-03 17:03:21] -rw-------. 1 boincer umatlas      4353 Jun  3 16:35 pilotlog.txt
[2025-06-03 17:03:21] -rw-------. 1 boincer umatlas    928665 Jun  3 16:35 log.45006595._036743.job.log.1
[2025-06-03 17:03:21] -rw-------. 1 boincer umatlas       357 Jun  3 16:35 output.list
[2025-06-03 17:03:21] -rw-r--r--. 1 boincer umatlas       620 Jun  3 16:35 runtime_log
[2025-06-03 17:03:21] -rw-------. 1 boincer umatlas   1310720 Jun  3 16:35 result.tar.gz
[2025-06-03 17:03:21] -rw-r--r--. 1 boincer umatlas      8650 Jun  3 16:35 runtime_log.err
[2025-06-03 17:03:21] -rw-------. 1 boincer umatlas       653 Jun  3 16:35 3XFLDmSYig7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYmkKDmW2J1Fn.diag
[2025-06-03 17:03:21] -rw-r--r--. 1 boincer umatlas      6673 Jun  3 17:03 init_data.xml
[2025-06-03 17:03:21] -rw-r--r--. 1 boincer umatlas        27 Jun  3 17:03 wrapper_checkpoint.txt
[2025-06-03 17:03:21] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 17:03 boinc_mmap_file
[2025-06-03 17:03:21] -rw-r--r--. 1 boincer umatlas     20903 Jun  3 17:03 stderr.txt
[2025-06-03 17:03:21] HITS file was successfully produced:
[2025-06-03 17:03:21] -rw-------. 1 boincer umatlas 179351517 Jun  3 16:34 shared/HITS.pool.root.1
[2025-06-03 17:03:21]  *** Contents of shared directory: ***
[2025-06-03 17:03:21] total 389164
[2025-06-03 17:03:21] -rw-r--r--. 2 boincer umatlas 217305694 Jun  3 13:45 ATLAS.root_0
[2025-06-03 17:03:21] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:45 start_atlas.sh
[2025-06-03 17:03:21] -rw-r--r--. 2 boincer umatlas    508878 Jun  3 13:45 input.tar.gz
[2025-06-03 17:03:21] -rw-------. 1 boincer umatlas 179351517 Jun  3 16:34 HITS.pool.root.1
[2025-06-03 17:03:21] -rw-------. 1 boincer umatlas   1310720 Jun  3 16:35 result.tar.gz
17:03:23 (3951044): run_atlas exited; CPU time 40058.167936
17:03:23 (3951044): called boinc_finish(0)

</stderr_txt>
]]>

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