Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:41:23 (1410772): wrapper (7.7.26015): starting
13:41:23 (1410772): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 13:41:23] Arguments: --nthreads 8
[2025-06-03 13:41:23] Threads: 8
[2025-06-03 13:41:23] Checking for CVMFS
[2025-06-03 13:41:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:41:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:41:24] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:41:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:41:24] 2.12.6.0 814677 89516 881132 146750 1 197 17362021 21551105 4192 16776704 1 293615830 99.329 535928260 27517 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 13:41:24] CVMFS is ok
[2025-06-03 13:41:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 13:41:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 13:41:24] Further information can be found at the LHC@home message board.
[2025-06-03 13:41:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:41:24] Checking for apptainer binary...
[2025-06-03 13:41:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:41:24] Running /usr/bin/apptainer --version
[2025-06-03 13:41:24] apptainer version 1.4.1-1.el9
[2025-06-03 13:41:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:41:24] c-16-30.aglt2.org
[2025-06-03 13:41:24] apptainer works
[2025-06-03 13:41:24] Set ATHENA_PROC_NUMBER=8
[2025-06-03 13:41:24] Set ATHENA_CORE_NUMBER=8
[2025-06-03 13:41:24] Starting ATLAS job with PandaID=6677782318
[2025-06-03 13:41:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/condor/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 21:33:27]  *** The last 200 lines of the pilot log: ***
[2025-06-03 21:33:27] 2025-06-04 01:33:10,125 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-03 21:33:27] 2025-06-04 01:33:10,125 | INFO     | using path: /var/lib/condor/boinchome/slots/3/PanDA_Pilot-6677782318/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 21:33:27] 2025-06-04 01:33:10,126 | INFO     | extracted standard info from prmon json
[2025-06-03 21:33:27] 2025-06-04 01:33:10,140 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:33:27] 2025-06-04 01:33:10,140 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:33:27] 2025-06-04 01:33:10,144 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:33:27] 2025-06-04 01:33:10,144 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:33:27] 2025-06-04 01:33:10,277 | INFO     | fitting pss+swap vs Time
[2025-06-03 21:33:27] 2025-06-04 01:33:10,317 | INFO     | sum of square deviations: 30777172347.663147
[2025-06-03 21:33:27] 2025-06-04 01:33:10,403 | INFO     | sum of deviations: -63821630292.8272
[2025-06-03 21:33:27] 2025-06-04 01:33:10,403 | INFO     | mean x: 1748986614.5939524
[2025-06-03 21:33:27] 2025-06-04 01:33:10,403 | INFO     | mean y: 2025848.4902807774
[2025-06-03 21:33:27] 2025-06-04 01:33:10,403 | INFO     | -- intersect: 3628843018.138227
[2025-06-03 21:33:27] 2025-06-04 01:33:10,403 | INFO     | intersect: 3628843018.138227
[2025-06-03 21:33:27] 2025-06-04 01:33:10,404 | INFO     | chi2: 4.747650080527046
[2025-06-03 21:33:27] 2025-06-04 01:33:10,461 | INFO     | sum of square deviations: 29790902843.37992
[2025-06-03 21:33:27] 2025-06-04 01:33:10,524 | INFO     | sum of deviations: -21825615041.856
[2025-06-03 21:33:27] 2025-06-04 01:33:10,525 | INFO     | mean x: 1748986462.1004367
[2025-06-03 21:33:27] 2025-06-04 01:33:10,525 | INFO     | mean y: 2032319.2794759825
[2025-06-03 21:33:27] 2025-06-04 01:33:10,525 | INFO     | -- intersect: 1283386746.02873
[2025-06-03 21:33:27] 2025-06-04 01:33:10,525 | INFO     | intersect: 1283386746.02873
[2025-06-03 21:33:27] 2025-06-04 01:33:10,526 | INFO     | chi2: 4.002427165750046
[2025-06-03 21:33:27] 2025-06-04 01:33:10,526 | INFO     | current chi2=4.002427165750046 (change=15.696668923297551 %)
[2025-06-03 21:33:27] 2025-06-04 01:33:10,526 | INFO     | right removable region: 457
[2025-06-03 21:33:27] 2025-06-04 01:33:10,527 | INFO     | sum of square deviations: 29790735093.3799
[2025-06-03 21:33:27] 2025-06-04 01:33:10,574 | INFO     | sum of deviations: -156744905564.9387
[2025-06-03 21:33:27] 2025-06-04 01:33:10,575 | INFO     | mean x: 1748986767.1004367
[2025-06-03 21:33:27] 2025-06-04 01:33:10,575 | INFO     | mean y: 2040194.6943231442
[2025-06-03 21:33:27] 2025-06-04 01:33:10,575 | INFO     | -- intersect: 9204390011.983854
[2025-06-03 21:33:27] 2025-06-04 01:33:10,575 | INFO     | intersect: 9204390011.983854
[2025-06-03 21:33:27] 2025-06-04 01:33:10,576 | INFO     | chi2: 2.3181941784994526
[2025-06-03 21:33:27] 2025-06-04 01:33:10,576 | INFO     | current chi2=2.3181941784994526 (change=51.17175572800207 %)
[2025-06-03 21:33:27] 2025-06-04 01:33:10,598 | INFO     | sum of square deviations: 28825600564.057392
[2025-06-03 21:33:27] 2025-06-04 01:33:10,625 | INFO     | sum of deviations: -213537317616.84088
[2025-06-03 21:33:27] 2025-06-04 01:33:10,626 | INFO     | mean x: 1748986919.607064
[2025-06-03 21:33:27] 2025-06-04 01:33:10,626 | INFO     | mean y: 2049160.4503311259
[2025-06-03 21:33:27] 2025-06-04 01:33:10,626 | INFO     | -- intersect: 12958378536.13446
[2025-06-03 21:33:27] 2025-06-04 01:33:10,626 | INFO     | intersect: 12958378536.13446
[2025-06-03 21:33:27] 2025-06-04 01:33:10,667 | INFO     | chi2: 1.3796183266895248
[2025-06-03 21:33:27] 2025-06-04 01:33:10,690 | INFO     | current chi2=1.3796183266895248 (change=40.487369889672486 %)
[2025-06-03 21:33:27] 2025-06-04 01:33:10,691 | INFO     | sum of square deviations: 27881536197.194134
[2025-06-03 21:33:27] 2025-06-04 01:33:10,738 | INFO     | sum of deviations: -211949673233.93985
[2025-06-03 21:33:27] 2025-06-04 01:33:10,739 | INFO     | mean x: 1748987072.1138394
[2025-06-03 21:33:27] 2025-06-04 01:33:10,739 | INFO     | mean y: 2048890.5870535714
[2025-06-03 21:33:27] 2025-06-04 01:33:10,739 | INFO     | -- intersect: 13297486982.775772
[2025-06-03 21:33:27] 2025-06-04 01:33:10,739 | INFO     | intersect: 13297486982.775772
[2025-06-03 21:33:27] 2025-06-04 01:33:10,764 | INFO     | chi2: 1.3286319709076084
[2025-06-03 21:33:27] 2025-06-04 01:33:10,765 | INFO     | current chi2=1.3286319709076084 (change=3.6956855961939197 %)
[2025-06-03 21:33:27] 2025-06-04 01:33:10,765 | INFO     | left removable region: 30
[2025-06-03 21:33:27] 2025-06-04 01:33:10,765 | INFO     | sum of square deviations: 24141504859.89233
[2025-06-03 21:33:27] 2025-06-04 01:33:10,798 | INFO     | sum of deviations: -131816165273.2084
[2025-06-03 21:33:27] 2025-06-04 01:33:10,798 | INFO     | mean x: 1748987346.6440282
[2025-06-03 21:33:27] 2025-06-04 01:33:10,807 | INFO     | mean y: 2050360.7025761125
[2025-06-03 21:33:27] 2025-06-04 01:33:10,807 | INFO     | -- intersect: 9551778369.953432
[2025-06-03 21:33:27] 2025-06-04 01:33:10,807 | INFO     | intersect: 9551778369.953432
[2025-06-03 21:33:27] 2025-06-04 01:33:10,808 | INFO     | chi2: 0.523119104472659
[2025-06-03 21:33:27] 2025-06-04 01:33:10,808 | INFO     | -- intersect: 9551778369.953432
[2025-06-03 21:33:27] 2025-06-04 01:33:10,809 | INFO     | current memory leak: -5.46 B/s (using 427 data points, chi2=0.52)
[2025-06-03 21:33:27] 2025-06-04 01:33:10,810 | INFO     | ..............................
[2025-06-03 21:33:27] 2025-06-04 01:33:10,810 | INFO     | . Timing measurements:
[2025-06-03 21:33:27] 2025-06-04 01:33:10,810 | INFO     | . get job = 0 s
[2025-06-03 21:33:27] 2025-06-04 01:33:10,823 | INFO     | . initial setup = 2 s
[2025-06-03 21:33:27] 2025-06-04 01:33:10,823 | INFO     | . payload setup = 7 s
[2025-06-03 21:33:27] 2025-06-04 01:33:10,823 | INFO     | . stage-in = 0 s
[2025-06-03 21:33:27] 2025-06-04 01:33:10,823 | INFO     | . payload execution = 28231 s
[2025-06-03 21:33:27] 2025-06-04 01:33:10,823 | INFO     | . stage-out = 6 s
[2025-06-03 21:33:27] 2025-06-04 01:33:10,823 | INFO     | . log creation = 1 s
[2025-06-03 21:33:27] 2025-06-04 01:33:10,824 | INFO     | ..............................
[2025-06-03 21:33:27] 2025-06-04 01:33:11,328 | INFO     | 
[2025-06-03 21:33:27] 2025-06-04 01:33:11,329 | INFO     | job summary report
[2025-06-03 21:33:27] 2025-06-04 01:33:11,329 | INFO     | --------------------------------------------------
[2025-06-03 21:33:27] 2025-06-04 01:33:11,329 | INFO     | PanDA job id: 6677782318
[2025-06-03 21:33:27] 2025-06-04 01:33:11,329 | INFO     | task id: 45006595
[2025-06-03 21:33:27] 2025-06-04 01:33:11,329 | INFO     | errors: (none)
[2025-06-03 21:33:27] 2025-06-04 01:33:11,330 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 21:33:27] 2025-06-04 01:33:11,330 | INFO     | pilot state: finished 
[2025-06-03 21:33:27] 2025-06-04 01:33:11,330 | INFO     | transexitcode: 0
[2025-06-03 21:33:27] 2025-06-04 01:33:11,330 | INFO     | exeerrorcode: 0
[2025-06-03 21:33:27] 2025-06-04 01:33:11,330 | INFO     | exeerrordiag: 
[2025-06-03 21:33:27] 2025-06-04 01:33:11,330 | INFO     | exitcode: 0
[2025-06-03 21:33:27] 2025-06-04 01:33:11,330 | INFO     | exitmsg: OK
[2025-06-03 21:33:27] 2025-06-04 01:33:11,331 | INFO     | cpuconsumptiontime: 66910 s
[2025-06-03 21:33:27] 2025-06-04 01:33:11,331 | INFO     | nevents: 400
[2025-06-03 21:33:27] 2025-06-04 01:33:11,331 | INFO     | neventsw: 0
[2025-06-03 21:33:27] 2025-06-04 01:33:11,331 | INFO     | pid: 1421891
[2025-06-03 21:33:27] 2025-06-04 01:33:11,331 | INFO     | pgrp: 1421891
[2025-06-03 21:33:27] 2025-06-04 01:33:11,331 | INFO     | corecount: 8
[2025-06-03 21:33:27] 2025-06-04 01:33:11,332 | INFO     | event service: False
[2025-06-03 21:33:27] 2025-06-04 01:33:11,332 | INFO     | sizes: {0: 2405024, 1: 2405223, 5: 2405429, 12: 2405485, 28243: 2441498, 28251: 2450645, 28280: 2450759}
[2025-06-03 21:33:27] 2025-06-04 01:33:11,359 | INFO     | --------------------------------------------------
[2025-06-03 21:33:27] 2025-06-04 01:33:11,359 | INFO     | 
[2025-06-03 21:33:27] 2025-06-04 01:33:11,359 | INFO     | executing command: ls -lF /var/lib/condor/boinchome/slots/3
[2025-06-03 21:33:27] 2025-06-04 01:33:11,468 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 21:33:27] 2025-06-04 01:33:11,468 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 21:33:27] 2025-06-04 01:33:11,469 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 21:33:27] 2025-06-04 01:33:11,469 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 21:33:27] 2025-06-04 01:33:11,469 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 21:33:27] 2025-06-04 01:33:11,469 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 21:33:27] 2025-06-04 01:33:11,469 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 21:33:27] 2025-06-04 01:33:11,469 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 21:33:27] 2025-06-04 01:33:11,469 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 21:33:27] 2025-06-04 01:33:11,470 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 21:33:27] 2025-06-04 01:33:11,470 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 21:33:27] 2025-06-04 01:33:11,470 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 21:33:27] 2025-06-04 01:33:11,470 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 21:33:27] 2025-06-04 01:33:11,470 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 21:33:27] 2025-06-04 01:33:11,470 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 21:33:27] 2025-06-04 01:33:11,470 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 21:33:27] 2025-06-04 01:33:11,471 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 21:33:27] 2025-06-04 01:33:11,471 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 21:33:27] 2025-06-04 01:33:11,471 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 21:33:27] 2025-06-04 01:33:11,471 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 21:33:27] 2025-06-04 01:33:11,471 | INFO     | job 6677782318 has completed (purged errors)
[2025-06-03 21:33:27] 2025-06-04 01:33:11,496 | INFO     | overall cleanup function is called
[2025-06-03 21:33:27] 2025-06-04 01:33:12,533 | INFO     | --- collectZombieJob: --- 10, [1421891]
[2025-06-03 21:33:27] 2025-06-04 01:33:12,533 | INFO     | zombie collector waiting for pid 1421891
[2025-06-03 21:33:27] 2025-06-04 01:33:12,533 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 21:33:27] 2025-06-04 01:33:12,533 | INFO     | collected zombie processes
[2025-06-03 21:33:27] 2025-06-04 01:33:12,533 | INFO     | will attempt to kill all subprocesses of pid=1421891
[2025-06-03 21:33:27] 2025-06-04 01:33:13,193 | INFO     | process IDs to be killed: [1421891] (in reverse order)
[2025-06-03 21:33:27] 2025-06-04 01:33:13,364 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 21:33:27] 2025-06-04 01:33:13,364 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 21:33:27] 2025-06-04 01:33:13,400 | INFO     | did not find any defunct processes belonging to 1421891
[2025-06-03 21:33:27] 2025-06-04 01:33:13,433 | INFO     | did not find any defunct processes belonging to 1421891
[2025-06-03 21:33:27] 2025-06-04 01:33:13,433 | INFO     | ready for new job
[2025-06-03 21:33:27] 2025-06-04 01:33:13,433 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 21:33:27] 2025-06-04 01:33:13,436 | INFO     | **************************************
[2025-06-03 21:33:27] 2025-06-04 01:33:13,436 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 21:33:27] 2025-06-04 01:33:13,436 | INFO     | **************************************
[2025-06-03 21:33:27] 2025-06-04 01:33:13,436 | INFO     | 
[2025-06-03 21:33:27] 2025-06-04 01:33:13,452 | INFO     | architecture information:
[2025-06-03 21:33:27] 2025-06-04 01:33:13,454 | INFO     | executing command: cat /etc/os-release
[2025-06-03 21:33:27] 2025-06-04 01:33:13,550 | INFO     | cat /etc/os-release:
[2025-06-03 21:33:27] NAME="CentOS Linux"
[2025-06-03 21:33:27] VERSION="7 (Core)"
[2025-06-03 21:33:27] ID="centos"
[2025-06-03 21:33:27] ID_LIKE="rhel fedora"
[2025-06-03 21:33:27] VERSION_ID="7"
[2025-06-03 21:33:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 21:33:27] ANSI_COLOR="0;31"
[2025-06-03 21:33:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 21:33:27] HOME_URL="https://www.centos.org/"
[2025-06-03 21:33:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 21:33:27] 
[2025-06-03 21:33:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 21:33:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 21:33:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 21:33:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 21:33:27] 
[2025-06-03 21:33:27] 2025-06-04 01:33:13,550 | INFO     | **************************************
[2025-06-03 21:33:27] 2025-06-04 01:33:14,054 | INFO     | executing command: df -mP /var/lib/condor/boinchome/slots/3
[2025-06-03 21:33:27] 2025-06-04 01:33:14,133 | INFO     | sufficient remaining disk space (1856367493120 B)
[2025-06-03 21:33:27] 2025-06-04 01:33:14,134 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 21:33:27] 2025-06-04 01:33:14,134 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 21:33:27] 2025-06-04 01:33:14,134 | INFO     | update_server=False
[2025-06-03 21:33:27] 2025-06-04 01:33:14,134 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 21:33:27] 2025-06-04 01:33:14,516 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:33:27] 2025-06-04 01:33:14,516 | INFO     | aborting loop
[2025-06-03 21:33:27] 2025-06-04 01:33:14,622 | INFO     | all payload control threads have been joined
[2025-06-03 21:33:27] 2025-06-04 01:33:14,878 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 21:33:27] 2025-06-04 01:33:14,878 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 21:33:27] 2025-06-04 01:33:14,878 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 21:33:27] 2025-06-04 01:33:15,140 | INFO     | [job] retrieve thread has finished
[2025-06-03 21:33:27] 2025-06-04 01:33:15,157 | INFO     | all data control threads have been joined
[2025-06-03 21:33:27] 2025-06-04 01:33:15,434 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 21:33:27] 2025-06-04 01:33:15,484 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 21:33:27] 2025-06-04 01:33:15,528 | INFO     | [job] job monitor thread has finished
[2025-06-03 21:33:27] 2025-06-04 01:33:15,589 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 21:33:27] 2025-06-04 01:33:15,607 | INFO     | [data] copytool_in thread has finished
[2025-06-03 21:33:27] 2025-06-04 01:33:15,628 | INFO     | [payload] control thread has finished
[2025-06-03 21:33:27] 2025-06-04 01:33:15,716 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 21:33:27] 2025-06-04 01:33:15,753 | INFO     | all job control threads have been joined
[2025-06-03 21:33:27] 2025-06-04 01:33:15,809 | INFO     | [payload] failed_post thread has finished
[2025-06-03 21:33:27] 2025-06-04 01:33:16,163 | INFO     | [data] control thread has finished
[2025-06-03 21:33:27] 2025-06-04 01:33:16,274 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 21:33:27] 2025-06-04 01:33:16,316 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:33:27] 2025-06-04 01:33:16,375 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 21:33:27] 2025-06-04 01:33:16,459 | INFO     | [job] validate thread has finished
[2025-06-03 21:33:27] 2025-06-04 01:33:16,464 | INFO     | [payload] validate_post thread has finished
[2025-06-03 21:33:27] 2025-06-04 01:33:16,759 | INFO     | [job] control thread has finished
[2025-06-03 21:33:27] 2025-06-04 01:33:17,322 | INFO     | [job] queue monitor thread has finished
[2025-06-03 21:33:27] 2025-06-04 01:33:17,441 | INFO     | [data] copytool_out thread has finished
[2025-06-03 21:33:27] 2025-06-04 01:33:19,742 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 21:33:27] 2025-06-04 01:33:21,502 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140389285119808)>', '<ExcThread(monitor, started 140388522260224)>']
[2025-06-03 21:33:27] 2025-06-04 01:33:22,011 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 21:33:27] 2025-06-04 01:33:22,011 | INFO     | [monitor] control thread has ended
[2025-06-03 21:33:27] 2025-06-04 01:33:26,528 | INFO     | all workflow threads have been joined
[2025-06-03 21:33:27] 2025-06-04 01:33:26,528 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 21:33:27] 2025-06-04 01:33:26,528 | INFO     | traces error code: 0
[2025-06-03 21:33:27] 2025-06-04 01:33:26,529 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 21:33:27] 2025-06-04 01:33:26,808 [wrapper] ==== pilot stdout END ====
[2025-06-03 21:33:27] 2025-06-04 01:33:26,811 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 21:33:27] 2025-06-04 01:33:26,814 [wrapper] pilotpid: 1414401
[2025-06-03 21:33:27] 2025-06-04 01:33:26,817 [wrapper] Pilot exit status: 0
[2025-06-03 21:33:27] 2025-06-04 01:33:26,853 [wrapper] pandaids: 6677782318
[2025-06-03 21:33:27] 2025-06-04 01:33:26,976 [wrapper] cleanup supervisor_pilot 3958496 1414402
[2025-06-03 21:33:27] 2025-06-04 01:33:26,980 [wrapper] Test setup, not cleaning
[2025-06-03 21:33:27] 2025-06-04 01:33:26,983 [wrapper] apfmon messages muted
[2025-06-03 21:33:27] 2025-06-04 01:33:26,987 [wrapper] ==== wrapper stdout END ====
[2025-06-03 21:33:27] 2025-06-04 01:33:26,991 [wrapper] ==== wrapper stderr END ====
[2025-06-03 21:33:27]  *** Error codes and diagnostics ***
[2025-06-03 21:33:27]     "exeErrorCode": 0,
[2025-06-03 21:33:27]     "exeErrorDiag": "",
[2025-06-03 21:33:27]     "pilotErrorCode": 0,
[2025-06-03 21:33:27]     "pilotErrorDiag": "",
[2025-06-03 21:33:27]  *** Listing of results directory ***
[2025-06-03 21:33:27] total 390656
[2025-06-03 21:33:27] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 12:39 pilot3.tar.gz
[2025-06-03 21:33:27] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 12:40 queuedata.json
[2025-06-03 21:33:27] -rwx------. 1 boincer umatlas     37140 Jun  3 12:41 runpilot2-wrapper.sh
[2025-06-03 21:33:27] -rw-r--r--. 1 boincer umatlas       100 Jun  3 13:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 21:33:27] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 13:41 run_atlas
[2025-06-03 21:33:27] -rw-r--r--. 1 boincer umatlas       105 Jun  3 13:41 job.xml
[2025-06-03 21:33:27] -rw-r--r--. 2 boincer umatlas 215337647 Jun  3 13:41 EVNT.45006593._001559.pool.root.1
[2025-06-03 21:33:27] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:41 start_atlas.sh
[2025-06-03 21:33:27] drwxrwx--x. 2 boincer umatlas        68 Jun  3 13:41 shared
[2025-06-03 21:33:27] -rw-r--r--. 2 boincer umatlas    508872 Jun  3 13:41 input.tar.gz
[2025-06-03 21:33:27] -rw-r--r--. 1 boincer umatlas         0 Jun  3 13:41 boinc_lockfile
[2025-06-03 21:33:27] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 13:41 pandaJob.out
[2025-06-03 21:33:27] -rw-------. 1 boincer umatlas    985078 Jun  3 13:41 agis_schedconf.cvmfs.json
[2025-06-03 21:33:27] drwx------. 4 boincer umatlas      4096 Jun  3 13:41 pilot3
[2025-06-03 21:33:27] -rw-r--r--. 1 boincer umatlas      6549 Jun  3 21:29 init_data.xml
[2025-06-03 21:33:27] -rw-------. 1 boincer umatlas 175599125 Jun  3 21:31 HITS.45006595._038862.pool.root.1
[2025-06-03 21:33:27] -rw-r--r--. 1 boincer umatlas       531 Jun  3 21:31 boinc_task_state.xml
[2025-06-03 21:33:27] -rw-------. 1 boincer umatlas      1035 Jun  3 21:32 memory_monitor_summary.json
[2025-06-03 21:33:27] -rw-------. 1 boincer umatlas        95 Jun  3 21:32 pilot_heartbeat.json
[2025-06-03 21:33:27] -rw-------. 1 boincer umatlas   1603667 Jun  3 21:32 agis_ddmendpoints.agis.ALL.json
[2025-06-03 21:33:27] -rw-------. 1 boincer umatlas    489030 Jun  3 21:32 log.45006595._038862.job.log.tgz.1
[2025-06-03 21:33:27] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 21:32 boinc_mmap_file
[2025-06-03 21:33:27] -rw-r--r--. 1 boincer umatlas        28 Jun  3 21:33 wrapper_checkpoint.txt
[2025-06-03 21:33:27] -rw-------. 1 boincer umatlas      7707 Jun  3 21:33 heartbeat.json
[2025-06-03 21:33:27] -rw-------. 1 boincer umatlas      4366 Jun  3 21:33 pilotlog.txt
[2025-06-03 21:33:27] -rw-------. 1 boincer umatlas   2143126 Jun  3 21:33 log.45006595._038862.job.log.1
[2025-06-03 21:33:27] -rw-------. 1 boincer umatlas       357 Jun  3 21:33 output.list
[2025-06-03 21:33:27] -rw-r--r--. 1 boincer umatlas       620 Jun  3 21:33 runtime_log
[2025-06-03 21:33:27] -rw-------. 1 boincer umatlas   2652160 Jun  3 21:33 result.tar.gz
[2025-06-03 21:33:27] -rw-r--r--. 1 boincer umatlas      8809 Jun  3 21:33 runtime_log.err
[2025-06-03 21:33:27] -rw-------. 1 boincer umatlas       657 Jun  3 21:33 1lyKDmWsjg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmW5kKDm71w9Sn.diag
[2025-06-03 21:33:27] -rw-r--r--. 1 boincer umatlas     20920 Jun  3 21:33 stderr.txt
[2025-06-03 21:33:27] HITS file was successfully produced:
[2025-06-03 21:33:27] -rw-------. 1 boincer umatlas 175599125 Jun  3 21:31 shared/HITS.pool.root.1
[2025-06-03 21:33:27]  *** Contents of shared directory: ***
[2025-06-03 21:33:27] total 384888
[2025-06-03 21:33:27] -rw-r--r--. 2 boincer umatlas 215337647 Jun  3 13:41 ATLAS.root_0
[2025-06-03 21:33:27] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:41 start_atlas.sh
[2025-06-03 21:33:27] -rw-r--r--. 2 boincer umatlas    508872 Jun  3 13:41 input.tar.gz
[2025-06-03 21:33:27] -rw-------. 1 boincer umatlas 175599125 Jun  3 21:31 HITS.pool.root.1
[2025-06-03 21:33:27] -rw-------. 1 boincer umatlas   2652160 Jun  3 21:33 result.tar.gz
21:33:29 (1410772): run_atlas exited; CPU time 68457.952911
21:33:29 (1410772): called boinc_finish(0)

</stderr_txt>
]]>

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