Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:43:40 (21689): wrapper (7.7.26015): starting
13:43:40 (21689): wrapper: running run_atlas (--nthreads 4)
[2025-06-03 13:43:40] Arguments: --nthreads 4
[2025-06-03 13:43:40] Threads: 4
[2025-06-03 13:43:40] Checking for CVMFS
[2025-06-03 13:43:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:43:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:43:40] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:43:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:43:40] 2.11.2.0 2853 34557 96604 146750 3 59 12147720 20275201 1 130560 0 11152195 99.956 6690774 7701 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 13:43:40] CVMFS is ok
[2025-06-03 13:43:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 13:43:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 13:43:40] Further information can be found at the LHC@home message board.
[2025-06-03 13:43:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:43:40] Checking for apptainer binary...
[2025-06-03 13:43:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:43:40] Running /usr/bin/apptainer --version
[2025-06-03 13:43:40] apptainer version 1.3.2-1.el7
[2025-06-03 13:43:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:43:41] c-204-7.aglt2.org
[2025-06-03 13:43:41] apptainer works
[2025-06-03 13:43:41] Set ATHENA_PROC_NUMBER=4
[2025-06-03 13:43:41] Set ATHENA_CORE_NUMBER=4
[2025-06-03 13:43:41] Starting ATLAS job with PandaID=6677676373
[2025-06-03 13:43:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 17:18:09]  *** The last 200 lines of the pilot log: ***
[2025-06-03 17:18:09] 2025-06-03 21:17:49,223 | INFO     | total number of processed events: 400 (read)
[2025-06-03 17:18:09] 2025-06-03 21:17:49,225 | INFO     | executing command: lscpu
[2025-06-03 17:18:09] 2025-06-03 21:17:49,264 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 17:18:09] 2025-06-03 21:17:50,144 | INFO     | monitor loop #975: job 0:6677676373 is in state 'finished'
[2025-06-03 17:18:09] 2025-06-03 21:17:50,152 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 17:18:09] 2025-06-03 21:17:52,655 | INFO     | monitor loop #976: job 0:6677676373 is in state 'finished'
[2025-06-03 17:18:09] 2025-06-03 21:17:52,655 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 17:18:09] 2025-06-03 21:17:55,070 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-03 17:18:09] 2025-06-03 21:17:55,071 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677676373/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 17:18:09] 2025-06-03 21:17:55,072 | INFO     | extracted standard info from prmon json
[2025-06-03 17:18:09] 2025-06-03 21:17:55,072 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 17:18:09] 2025-06-03 21:17:55,073 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 17:18:09] 2025-06-03 21:17:55,073 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 17:18:09] 2025-06-03 21:17:55,073 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 17:18:09] 2025-06-03 21:17:55,079 | INFO     | fitting pss+swap vs Time
[2025-06-03 17:18:09] 2025-06-03 21:17:55,079 | INFO     | sum of square deviations: 2871616632.5
[2025-06-03 17:18:09] 2025-06-03 21:17:55,081 | INFO     | sum of deviations: 1625510615.000004
[2025-06-03 17:18:09] 2025-06-03 21:17:55,081 | INFO     | mean x: 1748979032.5
[2025-06-03 17:18:09] 2025-06-03 21:17:55,082 | INFO     | mean y: 2323187.7523809522
[2025-06-03 17:18:09] 2025-06-03 21:17:55,082 | INFO     | -- intersect: -987705895.714138
[2025-06-03 17:18:09] 2025-06-03 21:17:55,082 | INFO     | intersect: -987705895.714138
[2025-06-03 17:18:09] 2025-06-03 21:17:55,082 | INFO     | chi2: 1.4583762158421794
[2025-06-03 17:18:09] 2025-06-03 21:17:55,083 | INFO     | sum of square deviations: 2671343110.0
[2025-06-03 17:18:09] 2025-06-03 21:17:55,084 | INFO     | sum of deviations: 1687537062.0000024
[2025-06-03 17:18:09] 2025-06-03 21:17:55,084 | INFO     | mean x: 1748978880.0
[2025-06-03 17:18:09] 2025-06-03 21:17:55,084 | INFO     | mean y: 2323234.287804878
[2025-06-03 17:18:09] 2025-06-03 21:17:55,084 | INFO     | -- intersect: -1102539210.9767628
[2025-06-03 17:18:09] 2025-06-03 21:17:55,084 | INFO     | intersect: -1102539210.9767628
[2025-06-03 17:18:09] 2025-06-03 21:17:55,085 | INFO     | chi2: 1.4586664294692262
[2025-06-03 17:18:09] 2025-06-03 21:17:55,085 | INFO     | current chi2=1.4586664294692262 (change=-0.019899777841566806 %)
[2025-06-03 17:18:09] 2025-06-03 21:17:55,085 | INFO     | right removable region: 204
[2025-06-03 17:18:09] 2025-06-03 21:17:55,085 | INFO     | sum of square deviations: 2671343110.0
[2025-06-03 17:18:09] 2025-06-03 21:17:55,087 | INFO     | sum of deviations: -22839565710.0
[2025-06-03 17:18:09] 2025-06-03 21:17:55,087 | INFO     | mean x: 1748979185.0
[2025-06-03 17:18:09] 2025-06-03 21:17:55,087 | INFO     | mean y: 2341552.0341463415
[2025-06-03 17:18:09] 2025-06-03 21:17:55,087 | INFO     | -- intersect: 14955839989.46615
[2025-06-03 17:18:09] 2025-06-03 21:17:55,087 | INFO     | intersect: 14955839989.46615
[2025-06-03 17:18:09] 2025-06-03 21:17:55,087 | INFO     | chi2: 0.1606740161984167
[2025-06-03 17:18:09] 2025-06-03 21:17:55,087 | INFO     | current chi2=0.1606740161984167 (change=88.98267714098512 %)
[2025-06-03 17:18:09] 2025-06-03 21:17:55,088 | INFO     | sum of square deviations: 2480604650.0
[2025-06-03 17:18:09] 2025-06-03 21:17:55,089 | INFO     | sum of deviations: -16867069007.999998
[2025-06-03 17:18:09] 2025-06-03 21:17:55,089 | INFO     | mean x: 1748979337.5
[2025-06-03 17:18:09] 2025-06-03 21:17:55,089 | INFO     | mean y: 2336759.48
[2025-06-03 17:18:09] 2025-06-03 21:17:55,089 | INFO     | -- intersect: 11894661148.68834
[2025-06-03 17:18:09] 2025-06-03 21:17:55,090 | INFO     | intersect: 11894661148.68834
[2025-06-03 17:18:09] 2025-06-03 21:17:55,090 | INFO     | chi2: 0.1398457222923505
[2025-06-03 17:18:09] 2025-06-03 21:17:55,090 | INFO     | current chi2=0.1398457222923505 (change=12.963075423685982 %)
[2025-06-03 17:18:09] 2025-06-03 21:17:55,090 | INFO     | left removable region: 20
[2025-06-03 17:18:09] 2025-06-03 21:17:55,090 | INFO     | sum of square deviations: 1931608310.0
[2025-06-03 17:18:09] 2025-06-03 21:17:55,091 | INFO     | sum of deviations: -1537818540.0
[2025-06-03 17:18:09] 2025-06-03 21:17:55,092 | INFO     | mean x: 1748979459.5
[2025-06-03 17:18:09] 2025-06-03 21:17:55,092 | INFO     | mean y: 2323641.782608696
[2025-06-03 17:18:09] 2025-06-03 21:17:55,092 | INFO     | -- intersect: 1394745192.7637594
[2025-06-03 17:18:09] 2025-06-03 21:17:55,092 | INFO     | intersect: 1394745192.7637594
[2025-06-03 17:18:09] 2025-06-03 21:17:55,092 | INFO     | chi2: 0.04408289144061425
[2025-06-03 17:18:09] 2025-06-03 21:17:55,092 | INFO     | -- intersect: 1394745192.7637594
[2025-06-03 17:18:09] 2025-06-03 21:17:55,093 | INFO     | current memory leak: -0.80 B/s (using 184 data points, chi2=0.04)
[2025-06-03 17:18:09] 2025-06-03 21:17:55,093 | INFO     | ..............................
[2025-06-03 17:18:09] 2025-06-03 21:17:55,093 | INFO     | . Timing measurements:
[2025-06-03 17:18:09] 2025-06-03 21:17:55,093 | INFO     | . get job = 0 s
[2025-06-03 17:18:09] 2025-06-03 21:17:55,093 | INFO     | . initial setup = 2 s
[2025-06-03 17:18:09] 2025-06-03 21:17:55,093 | INFO     | . payload setup = 7 s
[2025-06-03 17:18:09] 2025-06-03 21:17:55,094 | INFO     | . stage-in = 0 s
[2025-06-03 17:18:09] 2025-06-03 21:17:55,094 | INFO     | . payload execution = 12804 s
[2025-06-03 17:18:09] 2025-06-03 21:17:55,094 | INFO     | . stage-out = 2 s
[2025-06-03 17:18:09] 2025-06-03 21:17:55,094 | INFO     | . log creation = 0 s
[2025-06-03 17:18:09] 2025-06-03 21:17:55,094 | INFO     | ..............................
[2025-06-03 17:18:09] 2025-06-03 21:17:55,190 | INFO     | 
[2025-06-03 17:18:09] 2025-06-03 21:17:55,190 | INFO     | job summary report
[2025-06-03 17:18:09] 2025-06-03 21:17:55,194 | INFO     | --------------------------------------------------
[2025-06-03 17:18:09] 2025-06-03 21:17:55,194 | INFO     | PanDA job id: 6677676373
[2025-06-03 17:18:09] 2025-06-03 21:17:55,194 | INFO     | task id: 45006595
[2025-06-03 17:18:09] 2025-06-03 21:17:55,194 | INFO     | errors: (none)
[2025-06-03 17:18:09] 2025-06-03 21:17:55,194 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 17:18:09] 2025-06-03 21:17:55,194 | INFO     | pilot state: finished 
[2025-06-03 17:18:09] 2025-06-03 21:17:55,194 | INFO     | transexitcode: 0
[2025-06-03 17:18:09] 2025-06-03 21:17:55,195 | INFO     | exeerrorcode: 0
[2025-06-03 17:18:09] 2025-06-03 21:17:55,195 | INFO     | exeerrordiag: 
[2025-06-03 17:18:09] 2025-06-03 21:17:55,195 | INFO     | exitcode: 0
[2025-06-03 17:18:09] 2025-06-03 21:17:55,195 | INFO     | exitmsg: OK
[2025-06-03 17:18:09] 2025-06-03 21:17:55,195 | INFO     | cpuconsumptiontime: 49913 s
[2025-06-03 17:18:09] 2025-06-03 21:17:55,195 | INFO     | nevents: 400
[2025-06-03 17:18:09] 2025-06-03 21:17:55,195 | INFO     | neventsw: 0
[2025-06-03 17:18:09] 2025-06-03 21:17:55,196 | INFO     | pid: 32742
[2025-06-03 17:18:09] 2025-06-03 21:17:55,196 | INFO     | pgrp: 32742
[2025-06-03 17:18:09] 2025-06-03 21:17:55,196 | INFO     | corecount: 4
[2025-06-03 17:18:09] 2025-06-03 21:17:55,196 | INFO     | event service: False
[2025-06-03 17:18:09] 2025-06-03 21:17:55,196 | INFO     | sizes: {0: 2404356, 1: 2405212, 5: 2405418, 12: 2405474, 12816: 2435286, 12819: 2444227, 12821: 2444411, 12828: 2444581}
[2025-06-03 17:18:09] 2025-06-03 21:17:55,196 | INFO     | --------------------------------------------------
[2025-06-03 17:18:09] 2025-06-03 21:17:55,196 | INFO     | 
[2025-06-03 17:18:09] 2025-06-03 21:17:55,196 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 17:18:09] 2025-06-03 21:17:55,226 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 17:18:09] 2025-06-03 21:17:55,226 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 17:18:09] 2025-06-03 21:17:55,227 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 17:18:09] 2025-06-03 21:17:55,227 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 17:18:09] 2025-06-03 21:17:55,227 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 17:18:09] 2025-06-03 21:17:55,227 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 17:18:09] 2025-06-03 21:17:55,227 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 17:18:09] 2025-06-03 21:17:55,228 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 17:18:09] 2025-06-03 21:17:55,228 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 17:18:09] 2025-06-03 21:17:55,228 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 17:18:09] 2025-06-03 21:17:55,228 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 17:18:09] 2025-06-03 21:17:55,228 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 17:18:09] 2025-06-03 21:17:55,229 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 17:18:09] 2025-06-03 21:17:55,229 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 17:18:09] 2025-06-03 21:17:55,229 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 17:18:09] 2025-06-03 21:17:55,229 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 17:18:09] 2025-06-03 21:17:55,229 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 17:18:09] 2025-06-03 21:17:55,229 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 17:18:09] 2025-06-03 21:17:55,230 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 17:18:09] 2025-06-03 21:17:55,230 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 17:18:09] 2025-06-03 21:17:55,230 | INFO     | job 6677676373 has completed (purged errors)
[2025-06-03 17:18:09] 2025-06-03 21:17:55,230 | INFO     | overall cleanup function is called
[2025-06-03 17:18:09] 2025-06-03 21:17:56,235 | INFO     | --- collectZombieJob: --- 10, [32742]
[2025-06-03 17:18:09] 2025-06-03 21:17:56,235 | INFO     | zombie collector waiting for pid 32742
[2025-06-03 17:18:09] 2025-06-03 21:17:56,236 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 17:18:09] 2025-06-03 21:17:56,236 | INFO     | collected zombie processes
[2025-06-03 17:18:09] 2025-06-03 21:17:56,236 | INFO     | will attempt to kill all subprocesses of pid=32742
[2025-06-03 17:18:09] 2025-06-03 21:17:56,326 | INFO     | process IDs to be killed: [32742] (in reverse order)
[2025-06-03 17:18:09] 2025-06-03 21:17:56,383 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 17:18:09] 2025-06-03 21:17:56,384 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 17:18:09] 2025-06-03 21:17:56,388 | INFO     | did not find any defunct processes belonging to 32742
[2025-06-03 17:18:09] 2025-06-03 21:17:56,392 | INFO     | did not find any defunct processes belonging to 32742
[2025-06-03 17:18:09] 2025-06-03 21:17:56,392 | INFO     | ready for new job
[2025-06-03 17:18:09] 2025-06-03 21:17:56,392 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 17:18:09] 2025-06-03 21:17:56,394 | INFO     | **************************************
[2025-06-03 17:18:09] 2025-06-03 21:17:56,394 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 17:18:09] 2025-06-03 21:17:56,394 | INFO     | **************************************
[2025-06-03 17:18:09] 2025-06-03 21:17:56,394 | INFO     | 
[2025-06-03 17:18:09] 2025-06-03 21:17:56,395 | INFO     | architecture information:
[2025-06-03 17:18:09] 2025-06-03 21:17:56,395 | INFO     | executing command: cat /etc/os-release
[2025-06-03 17:18:09] 2025-06-03 21:17:56,414 | INFO     | cat /etc/os-release:
[2025-06-03 17:18:09] NAME="CentOS Linux"
[2025-06-03 17:18:09] VERSION="7 (Core)"
[2025-06-03 17:18:09] ID="centos"
[2025-06-03 17:18:09] ID_LIKE="rhel fedora"
[2025-06-03 17:18:09] VERSION_ID="7"
[2025-06-03 17:18:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 17:18:09] ANSI_COLOR="0;31"
[2025-06-03 17:18:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 17:18:09] HOME_URL="https://www.centos.org/"
[2025-06-03 17:18:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 17:18:09] 
[2025-06-03 17:18:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 17:18:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 17:18:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 17:18:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 17:18:09] 
[2025-06-03 17:18:09] 2025-06-03 21:17:56,414 | INFO     | **************************************
[2025-06-03 17:18:09] 2025-06-03 21:17:56,918 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 17:18:09] 2025-06-03 21:17:56,940 | INFO     | sufficient remaining disk space (18644729856 B)
[2025-06-03 17:18:09] 2025-06-03 21:17:56,941 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 17:18:09] 2025-06-03 21:17:56,941 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 17:18:09] 2025-06-03 21:17:56,941 | INFO     | update_server=False
[2025-06-03 17:18:09] 2025-06-03 21:17:56,941 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 17:18:09] 2025-06-03 21:17:56,942 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:18:09] 2025-06-03 21:17:56,942 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 17:18:09] 2025-06-03 21:17:56,942 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:18:09] 2025-06-03 21:17:56,943 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 17:18:09] 2025-06-03 21:17:56,943 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 17:18:09] 2025-06-03 21:17:56,943 | INFO     | aborting loop
[2025-06-03 17:18:09] 2025-06-03 21:17:56,944 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 17:18:09] 2025-06-03 21:17:56,944 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 17:18:09] 2025-06-03 21:17:57,255 | INFO     | all data control threads have been joined
[2025-06-03 17:18:09] 2025-06-03 21:17:57,469 | INFO     | all payload control threads have been joined
[2025-06-03 17:18:09] 2025-06-03 21:17:57,945 | INFO     | [job] retrieve thread has finished
[2025-06-03 17:18:09] 2025-06-03 21:17:57,946 | INFO     | [job] job monitor thread has finished
[2025-06-03 17:18:09] 2025-06-03 21:17:57,947 | INFO     | [job] queue monitor thread has finished
[2025-06-03 17:18:09] 2025-06-03 21:17:57,967 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 17:18:09] 2025-06-03 21:17:58,134 | INFO     | [payload] validate_post thread has finished
[2025-06-03 17:18:09] 2025-06-03 21:17:58,187 | INFO     | [payload] failed_post thread has finished
[2025-06-03 17:18:09] 2025-06-03 21:17:58,261 | INFO     | [data] control thread has finished
[2025-06-03 17:18:09] 2025-06-03 21:17:58,298 | INFO     | [job] validate thread has finished
[2025-06-03 17:18:09] 2025-06-03 21:17:58,405 | INFO     | [data] copytool_in thread has finished
[2025-06-03 17:18:09] 2025-06-03 21:17:58,474 | INFO     | [payload] control thread has finished
[2025-06-03 17:18:09] 2025-06-03 21:17:58,565 | INFO     | all job control threads have been joined
[2025-06-03 17:18:09] 2025-06-03 21:17:58,640 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 17:18:09] 2025-06-03 21:17:58,898 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 17:18:09] 2025-06-03 21:17:58,933 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 17:18:09] 2025-06-03 21:17:58,948 | INFO     | [data] copytool_out thread has finished
[2025-06-03 17:18:09] 2025-06-03 21:17:59,045 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 17:18:09] 2025-06-03 21:17:59,570 | INFO     | [job] control thread has finished
[2025-06-03 17:18:09] 2025-06-03 21:18:01,973 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 17:18:09] 2025-06-03 21:18:03,788 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139970952062784)>', '<ExcThread(monitor, started 139969830057728)>']
[2025-06-03 17:18:09] 2025-06-03 21:18:03,974 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 17:18:09] 2025-06-03 21:18:03,974 | INFO     | [monitor] control thread has ended
[2025-06-03 17:18:09] 2025-06-03 21:18:08,801 | INFO     | all workflow threads have been joined
[2025-06-03 17:18:09] 2025-06-03 21:18:08,801 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 17:18:09] 2025-06-03 21:18:08,801 | INFO     | traces error code: 0
[2025-06-03 17:18:09] 2025-06-03 21:18:08,802 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 17:18:09] 2025-06-03 21:18:08,911 [wrapper] ==== pilot stdout END ====
[2025-06-03 17:18:09] 2025-06-03 21:18:08,916 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 17:18:09] 2025-06-03 21:18:08,921 [wrapper] pilotpid: 25280
[2025-06-03 17:18:09] 2025-06-03 21:18:08,925 [wrapper] Pilot exit status: 0
[2025-06-03 17:18:09] 2025-06-03 21:18:08,948 [wrapper] pandaids: 6677676373
[2025-06-03 17:18:09] 2025-06-03 21:18:08,992 [wrapper] cleanup supervisor_pilot  8287 25281
[2025-06-03 17:18:09] 2025-06-03 21:18:08,997 [wrapper] Test setup, not cleaning
[2025-06-03 17:18:09] 2025-06-03 21:18:09,002 [wrapper] apfmon messages muted
[2025-06-03 17:18:09] 2025-06-03 21:18:09,007 [wrapper] ==== wrapper stdout END ====
[2025-06-03 17:18:09] 2025-06-03 21:18:09,012 [wrapper] ==== wrapper stderr END ====
[2025-06-03 17:18:09]  *** Error codes and diagnostics ***
[2025-06-03 17:18:09]     "exeErrorCode": 0,
[2025-06-03 17:18:09]     "exeErrorDiag": "",
[2025-06-03 17:18:09]     "pilotErrorCode": 0,
[2025-06-03 17:18:09]     "pilotErrorDiag": "",
[2025-06-03 17:18:09]  *** Listing of results directory ***
[2025-06-03 17:18:09] total 390380
[2025-06-03 17:18:09] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 10:52 pilot3.tar.gz
[2025-06-03 17:18:09] -rwx------ 1 boincer umatlas     37140 Jun  3 11:02 runpilot2-wrapper.sh
[2025-06-03 17:18:09] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 11:02 queuedata.json
[2025-06-03 17:18:09] -rw-r--r-- 1 boincer umatlas       100 Jun  3 13:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 17:18:09] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 13:43 run_atlas
[2025-06-03 17:18:09] -rw-r--r-- 1 boincer umatlas       105 Jun  3 13:43 job.xml
[2025-06-03 17:18:09] -rw-r--r-- 2 boincer umatlas 214458636 Jun  3 13:43 EVNT.45006593._001466.pool.root.1
[2025-06-03 17:18:09] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 13:43 start_atlas.sh
[2025-06-03 17:18:09] drwxrwx--x 2 boincer umatlas      4096 Jun  3 13:43 shared
[2025-06-03 17:18:09] -rw-r--r-- 2 boincer umatlas    508878 Jun  3 13:43 input.tar.gz
[2025-06-03 17:18:09] -rw-r--r-- 1 boincer umatlas         0 Jun  3 13:43 boinc_lockfile
[2025-06-03 17:18:09] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 13:43 pandaJob.out
[2025-06-03 17:18:09] -rw-r--r-- 1 boincer umatlas      2058 Jun  3 13:43 stderr.txt
[2025-06-03 17:18:09] -rw------- 1 boincer umatlas    985078 Jun  3 13:43 agis_schedconf.cvmfs.json
[2025-06-03 17:18:09] drwx------ 4 boincer umatlas      4096 Jun  3 13:43 pilot3
[2025-06-03 17:18:09] -rw-r--r-- 1 boincer umatlas      5825 Jun  3 17:12 init_data.xml
[2025-06-03 17:18:09] -rw------- 1 boincer umatlas 178497292 Jun  3 17:17 HITS.45006595._036497.pool.root.1
[2025-06-03 17:18:09] -rw------- 1 boincer umatlas        95 Jun  3 17:17 pilot_heartbeat.json
[2025-06-03 17:18:09] -rw-r--r-- 1 boincer umatlas       530 Jun  3 17:17 boinc_task_state.xml
[2025-06-03 17:18:09] -rw------- 1 boincer umatlas      1056 Jun  3 17:17 memory_monitor_summary.json
[2025-06-03 17:18:09] -rw------- 1 boincer umatlas   1603667 Jun  3 17:17 agis_ddmendpoints.agis.ALL.json
[2025-06-03 17:18:09] -rw------- 1 boincer umatlas    330750 Jun  3 17:17 log.45006595._036497.job.log.tgz.1
[2025-06-03 17:18:09] -rw------- 1 boincer umatlas      7749 Jun  3 17:17 heartbeat.json
[2025-06-03 17:18:09] -rw-r--r-- 1 boincer umatlas        28 Jun  3 17:18 wrapper_checkpoint.txt
[2025-06-03 17:18:09] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 17:18 boinc_mmap_file
[2025-06-03 17:18:09] -rw------- 1 boincer umatlas      4476 Jun  3 17:18 pilotlog.txt
[2025-06-03 17:18:09] -rw------- 1 boincer umatlas   1159916 Jun  3 17:18 log.45006595._036497.job.log.1
[2025-06-03 17:18:09] -rw------- 1 boincer umatlas       357 Jun  3 17:18 output.list
[2025-06-03 17:18:09] -rw-r--r-- 1 boincer umatlas       620 Jun  3 17:18 runtime_log
[2025-06-03 17:18:09] -rw------- 1 boincer umatlas   1505280 Jun  3 17:18 result.tar.gz
[2025-06-03 17:18:09] -rw-r--r-- 1 boincer umatlas      8655 Jun  3 17:18 runtime_log.err
[2025-06-03 17:18:09] -rw------- 1 boincer umatlas       662 Jun  3 17:18 edmNDmOLig7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzjkKDmFWty3n.diag
[2025-06-03 17:18:09] HITS file was successfully produced:
[2025-06-03 17:18:09] -rw------- 1 boincer umatlas 178497292 Jun  3 17:17 shared/HITS.pool.root.1
[2025-06-03 17:18:09]  *** Contents of shared directory: ***
[2025-06-03 17:18:09] total 385744
[2025-06-03 17:18:09] -rw-r--r-- 2 boincer umatlas 214458636 Jun  3 13:43 ATLAS.root_0
[2025-06-03 17:18:09] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 13:43 start_atlas.sh
[2025-06-03 17:18:09] -rw-r--r-- 2 boincer umatlas    508878 Jun  3 13:43 input.tar.gz
[2025-06-03 17:18:09] -rw------- 1 boincer umatlas 178497292 Jun  3 17:17 HITS.pool.root.1
[2025-06-03 17:18:09] -rw------- 1 boincer umatlas   1505280 Jun  3 17:18 result.tar.gz
17:18:11 (21689): run_atlas exited; CPU time 49634.593695
17:18:11 (21689): called boinc_finish(0)

</stderr_txt>
]]>

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