Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:20:32 (4451): wrapper (7.7.26015): starting
05:20:32 (4451): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 05:20:32] Arguments: --nthreads 8
[2025-06-04 05:20:32] Threads: 8
[2025-06-04 05:20:32] Checking for CVMFS
[2025-06-04 05:20:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 05:20:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 05:20:33] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 05:20:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 05:20:34] 2.11.2.0 7198 32679 95164 146765 3 16 24158517 25165825 3521 130560 0 17253160 99.796 19061173 2157 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 05:20:34] CVMFS is ok
[2025-06-04 05:20:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 05:20:34] Checking for apptainer binary...
[2025-06-04 05:20:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 05:20:34] Running /usr/bin/apptainer --version
[2025-06-04 05:20:34] apptainer version 1.3.2-1.el7
[2025-06-04 05:20:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 05:20:47] cg-vwn468.simple-grid.lan
[2025-06-04 05:20:47] apptainer works
[2025-06-04 05:20:47] Set ATHENA_PROC_NUMBER=8
[2025-06-04 05:20:47] Set ATHENA_CORE_NUMBER=8
[2025-06-04 05:20:48] Starting ATLAS job with PandaID=6677618655
[2025-06-04 05:20:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:46:48]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:46:48] 2025-06-04 07:03:24,101 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:46:48] 2025-06-04 07:03:24,101 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:46:48] 2025-06-04 07:03:24,101 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:46:48] 2025-06-04 07:03:24,101 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:46:48] 2025-06-04 07:03:24,107 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:46:48] 2025-06-04 07:03:24,107 | INFO     | sum of square deviations: 2671343110.0
[2025-06-04 11:46:48] 2025-06-04 07:03:24,109 | INFO     | sum of deviations: 116623583220.0
[2025-06-04 11:46:48] 2025-06-04 07:03:24,109 | INFO     | mean x: 1749014264.0
[2025-06-04 11:46:48] 2025-06-04 07:03:24,109 | INFO     | mean y: 2376630.424390244
[2025-06-04 11:46:48] 2025-06-04 07:03:24,109 | INFO     | -- intersect: -76354834768.96454
[2025-06-04 11:46:48] 2025-06-04 07:03:24,109 | INFO     | intersect: -76354834768.96454
[2025-06-04 11:46:48] 2025-06-04 07:03:24,109 | INFO     | chi2: 8.51419595682271
[2025-06-04 11:46:48] 2025-06-04 07:03:24,110 | INFO     | sum of square deviations: 2480604650.0
[2025-06-04 11:46:48] 2025-06-04 07:03:24,111 | INFO     | sum of deviations: 126676330699.0
[2025-06-04 11:46:48] 2025-06-04 07:03:24,112 | INFO     | mean x: 1749014111.5
[2025-06-04 11:46:48] 2025-06-04 07:03:24,112 | INFO     | mean y: 2384455.25
[2025-06-04 11:46:48] 2025-06-04 07:03:24,112 | INFO     | -- intersect: -89314020714.59102
[2025-06-04 11:46:48] 2025-06-04 07:03:24,112 | INFO     | intersect: -89314020714.59102
[2025-06-04 11:46:48] 2025-06-04 07:03:24,112 | INFO     | chi2: 7.825350376888039
[2025-06-04 11:46:48] 2025-06-04 07:03:24,112 | INFO     | current chi2=7.825350376888039 (change=8.090553511194166 %)
[2025-06-04 11:46:48] 2025-06-04 07:03:24,112 | INFO     | right removable region: 199
[2025-06-04 11:46:48] 2025-06-04 07:03:24,113 | INFO     | sum of square deviations: 2480604650.0
[2025-06-04 11:46:48] 2025-06-04 07:03:24,114 | INFO     | sum of deviations: 44988159196.5
[2025-06-04 11:46:48] 2025-06-04 07:03:24,114 | INFO     | mean x: 1749014416.5
[2025-06-04 11:46:48] 2025-06-04 07:03:24,114 | INFO     | mean y: 2433881.505
[2025-06-04 11:46:48] 2025-06-04 07:03:24,114 | INFO     | -- intersect: -31717630420.751125
[2025-06-04 11:46:48] 2025-06-04 07:03:24,114 | INFO     | intersect: -31717630420.751125
[2025-06-04 11:46:48] 2025-06-04 07:03:24,115 | INFO     | chi2: 3.1699310851220033
[2025-06-04 11:46:48] 2025-06-04 07:03:24,115 | INFO     | current chi2=3.1699310851220033 (change=62.768873288829674 %)
[2025-06-04 11:46:48] 2025-06-04 07:03:24,115 | INFO     | sum of square deviations: 2299168690.0
[2025-06-04 11:46:48] 2025-06-04 07:03:24,117 | INFO     | sum of deviations: -3821476637.999998
[2025-06-04 11:46:48] 2025-06-04 07:03:24,117 | INFO     | mean x: 1749014569.0
[2025-06-04 11:46:48] 2025-06-04 07:03:24,117 | INFO     | mean y: 2474807.769230769
[2025-06-04 11:46:48] 2025-06-04 07:03:24,117 | INFO     | -- intersect: 2909533495.55744
[2025-06-04 11:46:48] 2025-06-04 07:03:24,117 | INFO     | intersect: 2909533495.55744
[2025-06-04 11:46:48] 2025-06-04 07:03:24,117 | INFO     | chi2: 0.8715745035134376
[2025-06-04 11:46:48] 2025-06-04 07:03:24,117 | INFO     | current chi2=0.8715745035134376 (change=72.50493843212706 %)
[2025-06-04 11:46:48] 2025-06-04 07:03:24,118 | INFO     | sum of square deviations: 2126802667.5
[2025-06-04 11:46:48] 2025-06-04 07:03:24,119 | INFO     | sum of deviations: -9463447402.0
[2025-06-04 11:46:48] 2025-06-04 07:03:24,119 | INFO     | mean x: 1749014721.5
[2025-06-04 11:46:48] 2025-06-04 07:03:24,119 | INFO     | mean y: 2479741.294736842
[2025-06-04 11:46:48] 2025-06-04 07:03:24,119 | INFO     | -- intersect: 7784917235.458228
[2025-06-04 11:46:48] 2025-06-04 07:03:24,119 | INFO     | intersect: 7784917235.458228
[2025-06-04 11:46:48] 2025-06-04 07:03:24,120 | INFO     | chi2: 0.8178944335410823
[2025-06-04 11:46:48] 2025-06-04 07:03:24,120 | INFO     | current chi2=0.8178944335410823 (change=6.15897662861448 %)
[2025-06-04 11:46:48] 2025-06-04 07:03:24,120 | INFO     | left removable region: 30
[2025-06-04 11:46:48] 2025-06-04 07:03:24,120 | INFO     | sum of square deviations: 1496660620.0
[2025-06-04 11:46:48] 2025-06-04 07:03:24,121 | INFO     | sum of deviations: 3627422583.9999995
[2025-06-04 11:46:48] 2025-06-04 07:03:24,121 | INFO     | mean x: 1749014996.0
[2025-06-04 11:46:48] 2025-06-04 07:03:24,122 | INFO     | mean y: 2490330.579881657
[2025-06-04 11:46:48] 2025-06-04 07:03:24,122 | INFO     | -- intersect: -4236557862.0859137
[2025-06-04 11:46:48] 2025-06-04 07:03:24,122 | INFO     | intersect: -4236557862.0859137
[2025-06-04 11:46:48] 2025-06-04 07:03:24,122 | INFO     | chi2: 0.0005111006021678931
[2025-06-04 11:46:48] 2025-06-04 07:03:24,122 | INFO     | -- intersect: -4236557862.0859137
[2025-06-04 11:46:48] 2025-06-04 07:03:24,122 | INFO     | current memory leak: 2.42 B/s (using 169 data points, chi2=0.00)
[2025-06-04 11:46:48] 2025-06-04 07:03:24,123 | INFO     | ..............................
[2025-06-04 11:46:48] 2025-06-04 07:03:24,123 | INFO     | . Timing measurements:
[2025-06-04 11:46:48] 2025-06-04 07:03:24,123 | INFO     | . get job = 0 s
[2025-06-04 11:46:48] 2025-06-04 07:03:24,123 | INFO     | . initial setup = 43 s
[2025-06-04 11:46:48] 2025-06-04 07:03:24,124 | INFO     | . payload setup = 185 s
[2025-06-04 11:46:48] 2025-06-04 07:03:24,124 | INFO     | . stage-in = 0 s
[2025-06-04 11:46:48] 2025-06-04 07:03:24,124 | INFO     | . payload execution = 12618 s
[2025-06-04 11:46:48] 2025-06-04 07:03:24,124 | INFO     | . stage-out = 4 s
[2025-06-04 11:46:48] 2025-06-04 07:03:24,124 | INFO     | . log creation = 1 s
[2025-06-04 11:46:48] 2025-06-04 07:03:24,124 | INFO     | ..............................
[2025-06-04 11:46:48] 2025-06-04 07:03:24,238 | INFO     | 
[2025-06-04 11:46:48] 2025-06-04 07:03:24,238 | INFO     | job summary report
[2025-06-04 11:46:48] 2025-06-04 07:03:24,238 | INFO     | --------------------------------------------------
[2025-06-04 11:46:48] 2025-06-04 07:03:24,238 | INFO     | PanDA job id: 6677618655
[2025-06-04 11:46:48] 2025-06-04 07:03:24,238 | INFO     | task id: 45006595
[2025-06-04 11:46:48] 2025-06-04 07:03:24,238 | INFO     | errors: (none)
[2025-06-04 11:46:48] 2025-06-04 07:03:24,239 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:46:48] 2025-06-04 07:03:24,239 | INFO     | pilot state: finished 
[2025-06-04 11:46:48] 2025-06-04 07:03:24,239 | INFO     | transexitcode: 0
[2025-06-04 11:46:48] 2025-06-04 07:03:24,239 | INFO     | exeerrorcode: 0
[2025-06-04 11:46:48] 2025-06-04 07:03:24,239 | INFO     | exeerrordiag: 
[2025-06-04 11:46:48] 2025-06-04 07:03:24,239 | INFO     | exitcode: 0
[2025-06-04 11:46:48] 2025-06-04 07:03:24,239 | INFO     | exitmsg: OK
[2025-06-04 11:46:48] 2025-06-04 07:03:24,239 | INFO     | cpuconsumptiontime: 45238 s
[2025-06-04 11:46:48] 2025-06-04 07:03:24,239 | INFO     | nevents: 400
[2025-06-04 11:46:48] 2025-06-04 07:03:24,239 | INFO     | neventsw: 0
[2025-06-04 11:46:48] 2025-06-04 07:03:24,239 | INFO     | pid: 20446
[2025-06-04 11:46:48] 2025-06-04 07:03:24,239 | INFO     | pgrp: 20446
[2025-06-04 11:46:48] 2025-06-04 07:03:24,240 | INFO     | corecount: 8
[2025-06-04 11:46:48] 2025-06-04 07:03:24,240 | INFO     | event service: False
[2025-06-04 11:46:48] 2025-06-04 07:03:24,240 | INFO     | sizes: {0: 2404356, 1: 2405212, 2: 2405212, 13: 2405240, 23: 2405296, 34: 2405324, 45: 2405480, 56: 2405508, 66: 2405536, 77: 2405564, 88: 2405620, 99: 2406134, 10
[2025-06-04 11:46:48] 2025-06-04 07:03:24,240 | INFO     | --------------------------------------------------
[2025-06-04 11:46:48] 2025-06-04 07:03:24,240 | INFO     | 
[2025-06-04 11:46:48] 2025-06-04 07:03:24,240 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-04 11:46:48] 2025-06-04 07:03:24,605 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:46:48] 2025-06-04 07:03:24,606 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:46:48] 2025-06-04 07:03:24,606 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:46:48] 2025-06-04 07:03:24,606 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:46:48] 2025-06-04 07:03:24,606 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:46:48] 2025-06-04 07:03:24,606 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:46:48] 2025-06-04 07:03:24,606 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:46:48] 2025-06-04 07:03:24,606 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:46:48] 2025-06-04 07:03:24,606 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:46:48] 2025-06-04 07:03:24,606 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:46:48] 2025-06-04 07:03:24,607 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:46:48] 2025-06-04 07:03:24,607 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:46:48] 2025-06-04 07:03:24,607 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:46:48] 2025-06-04 07:03:24,607 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:46:48] 2025-06-04 07:03:24,607 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:46:48] 2025-06-04 07:03:24,607 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:46:48] 2025-06-04 07:03:24,607 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:46:48] 2025-06-04 07:03:24,607 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:46:48] 2025-06-04 07:03:24,607 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:46:48] 2025-06-04 07:03:24,607 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:46:48] 2025-06-04 07:03:24,608 | INFO     | job 6677618655 has completed (purged errors)
[2025-06-04 11:46:48] 2025-06-04 07:03:24,608 | INFO     | overall cleanup function is called
[2025-06-04 11:46:48] 2025-06-04 07:03:25,616 | INFO     | --- collectZombieJob: --- 10, [20446]
[2025-06-04 11:46:48] 2025-06-04 07:03:25,616 | INFO     | zombie collector waiting for pid 20446
[2025-06-04 11:46:48] 2025-06-04 07:03:25,616 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:46:48] 2025-06-04 07:03:25,616 | INFO     | collected zombie processes
[2025-06-04 11:46:48] 2025-06-04 07:03:25,616 | INFO     | will attempt to kill all subprocesses of pid=20446
[2025-06-04 11:46:48] 2025-06-04 07:03:25,738 | INFO     | process IDs to be killed: [20446] (in reverse order)
[2025-06-04 11:46:48] 2025-06-04 07:03:26,182 | INFO     | PID=9822 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-04 11:46:48] 2025-06-04 07:03:26,182 | INFO     | .. there are 9 such processes running
[2025-06-04 11:46:48] 2025-06-04 07:03:26,438 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:46:48] 2025-06-04 07:03:26,439 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:46:48] 2025-06-04 07:03:26,442 | INFO     | did not find any defunct processes belonging to 20446
[2025-06-04 11:46:48] 2025-06-04 07:03:26,445 | INFO     | did not find any defunct processes belonging to 20446
[2025-06-04 11:46:48] 2025-06-04 07:03:26,445 | INFO     | ready for new job
[2025-06-04 11:46:48] 2025-06-04 07:03:26,446 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:46:48] 2025-06-04 07:03:26,447 | INFO     | **************************************
[2025-06-04 11:46:48] 2025-06-04 07:03:26,447 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:46:48] 2025-06-04 07:03:26,448 | INFO     | **************************************
[2025-06-04 11:46:48] 2025-06-04 07:03:26,448 | INFO     | 
[2025-06-04 11:46:48] 2025-06-04 07:03:26,448 | INFO     | pilot is running in a VM
[2025-06-04 11:46:48] 2025-06-04 07:03:26,448 | INFO     | architecture information:
[2025-06-04 11:46:48] 2025-06-04 07:03:26,461 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:46:48] 2025-06-04 07:03:26,700 | INFO     | cat /etc/os-release:
[2025-06-04 11:46:48] NAME="CentOS Linux"
[2025-06-04 11:46:48] VERSION="7 (Core)"
[2025-06-04 11:46:48] ID="centos"
[2025-06-04 11:46:48] ID_LIKE="rhel fedora"
[2025-06-04 11:46:48] VERSION_ID="7"
[2025-06-04 11:46:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:46:48] ANSI_COLOR="0;31"
[2025-06-04 11:46:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:46:48] HOME_URL="https://www.centos.org/"
[2025-06-04 11:46:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:46:48] 
[2025-06-04 11:46:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:46:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:46:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:46:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:46:48] 
[2025-06-04 11:46:48] 2025-06-04 07:03:26,700 | INFO     | **************************************
[2025-06-04 11:46:48] 2025-06-04 07:03:27,203 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-04 11:46:48] 2025-06-04 07:03:27,488 | INFO     | sufficient remaining disk space (497066967040 B)
[2025-06-04 11:46:48] 2025-06-04 07:03:27,488 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:46:48] 2025-06-04 07:03:27,488 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:46:48] 2025-06-04 07:03:27,488 | INFO     | update_server=False
[2025-06-04 11:46:48] 2025-06-04 07:03:27,488 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:46:48] 2025-06-04 07:03:27,489 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:46:48] 2025-06-04 07:03:27,744 | INFO     | all data control threads have been joined
[2025-06-04 11:46:48] 2025-06-04 07:03:27,785 | INFO     | all payload control threads have been joined
[2025-06-04 11:46:48] 2025-06-04 07:03:28,189 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:46:48] 2025-06-04 07:03:28,189 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:46:48] 2025-06-04 07:03:28,189 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:46:48] 2025-06-04 07:03:28,207 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:46:48] 2025-06-04 07:03:28,207 | INFO     | aborting loop
[2025-06-04 11:46:48] 2025-06-04 07:03:28,495 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:46:48] 2025-06-04 07:03:28,521 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:46:48] 2025-06-04 07:03:28,747 | INFO     | [job] validate thread has finished
[2025-06-04 11:46:48] 2025-06-04 07:03:28,749 | INFO     | [data] control thread has finished
[2025-06-04 11:46:48] 2025-06-04 07:03:28,790 | INFO     | [payload] control thread has finished
[2025-06-04 11:46:48] 2025-06-04 07:03:28,899 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:46:48] 2025-06-04 07:03:28,936 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:46:48] 2025-06-04 07:03:29,013 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:46:48] 2025-06-04 07:03:29,203 | INFO     | all job control threads have been joined
[2025-06-04 11:46:48] 2025-06-04 07:03:29,213 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:46:48] 2025-06-04 07:03:29,252 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:46:48] 2025-06-04 07:03:29,352 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:46:48] 2025-06-04 07:03:29,405 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:46:48] 2025-06-04 07:03:29,496 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:46:48] 2025-06-04 07:03:29,585 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:46:48] 2025-06-04 07:03:29,839 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:46:48] 2025-06-04 07:03:30,209 | INFO     | [job] control thread has finished
[2025-06-04 11:46:48] 2025-06-04 07:03:30,258 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:46:48] 2025-06-04 07:03:33,415 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:46:48] 2025-06-04 07:03:33,804 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140266772621120)>', '<ExcThread(monitor, started 140266031798016)>']
[2025-06-04 11:46:48] 2025-06-04 07:03:34,226 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:46:48] 2025-06-04 07:03:34,226 | INFO     | [monitor] control thread has ended
[2025-06-04 11:46:48] 2025-06-04 07:03:38,830 | INFO     | all workflow threads have been joined
[2025-06-04 11:46:48] 2025-06-04 07:03:38,830 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:46:48] 2025-06-04 07:03:38,830 | INFO     | traces error code: 0
[2025-06-04 11:46:48] 2025-06-04 07:03:38,831 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:46:48] 2025-06-04 07:03:39,179 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:46:48] 2025-06-04 07:03:39,299 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:46:48] 2025-06-04 07:03:39,355 [wrapper] pilotpid: 9822
[2025-06-04 11:46:48] 2025-06-04 07:03:39,415 [wrapper] Pilot exit status: 0
[2025-06-04 11:46:48] 2025-06-04 07:03:39,677 [wrapper] pandaids: 6677618655
[2025-06-04 11:46:48] 2025-06-04 07:03:40,254 [wrapper] cleanup supervisor_pilot  8319 9823
[2025-06-04 11:46:48] 2025-06-04 07:03:40,342 [wrapper] Test setup, not cleaning
[2025-06-04 11:46:48] 2025-06-04 07:03:40,379 [wrapper] apfmon messages muted
[2025-06-04 11:46:48] 2025-06-04 07:03:40,460 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:46:48] 2025-06-04 07:03:40,509 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:46:48]  *** Error codes and diagnostics ***
[2025-06-04 11:46:48]     "exeErrorCode": 0,
[2025-06-04 11:46:48]     "exeErrorDiag": "",
[2025-06-04 11:46:48]     "pilotErrorCode": 0,
[2025-06-04 11:46:48]     "pilotErrorDiag": "",
[2025-06-04 11:46:48]  *** Listing of results directory ***
[2025-06-04 11:46:48] total 390892
[2025-06-04 11:46:48] -rw-r--r--. 1 boinc boinc    495897 Jun  3 14:14 pilot3.tar.gz
[2025-06-04 11:46:48] -rw-r--r--. 1 boinc boinc      5111 Jun  3 14:27 queuedata.json
[2025-06-04 11:46:48] -rwx------. 1 boinc boinc     37140 Jun  3 14:28 runpilot2-wrapper.sh
[2025-06-04 11:46:48] -rw-r--r--. 1 boinc boinc       100 Jun  4 05:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:46:48] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 05:20 run_atlas
[2025-06-04 11:46:48] -rw-r--r--. 1 boinc boinc       105 Jun  4 05:20 job.xml
[2025-06-04 11:46:48] -rw-r--r--. 2 boinc boinc 215740649 Jun  4 05:20 EVNT.45006593._001303.pool.root.1
[2025-06-04 11:46:48] drwxrwx--x. 2 boinc boinc        68 Jun  4 05:20 shared
[2025-06-04 11:46:48] -rw-r--r--. 2 boinc boinc    508880 Jun  4 05:20 input.tar.gz
[2025-06-04 11:46:48] -rw-r--r--. 1 boinc boinc      6392 Jun  4 05:20 init_data.xml
[2025-06-04 11:46:48] -rw-r--r--. 2 boinc boinc     15093 Jun  4 05:20 start_atlas.sh
[2025-06-04 11:46:48] -rw-r--r--. 1 boinc boinc         0 Jun  4 05:20 boinc_lockfile
[2025-06-04 11:46:48] -rw-r--r--. 1 boinc boinc      2525 Jun  4 05:20 pandaJob.out
[2025-06-04 11:46:48] -rw-------. 1 boinc boinc    986077 Jun  4 05:24 agis_schedconf.cvmfs.json
[2025-06-04 11:46:48] drwx------. 4 boinc boinc      4096 Jun  4 05:24 pilot3
[2025-06-04 11:46:48] -rw-------. 1 boinc boinc 177719253 Jun  4 09:00 HITS.45006595._032370.pool.root.1
[2025-06-04 11:46:48] -rw-r--r--. 1 boinc boinc       530 Jun  4 09:00 boinc_task_state.xml
[2025-06-04 11:46:48] -rw-------. 1 boinc boinc      1027 Jun  4 09:01 memory_monitor_summary.json
[2025-06-04 11:46:48] -rw-------. 1 boinc boinc   1603667 Jun  4 09:01 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:46:48] -rw-------. 1 boinc boinc    364543 Jun  4 09:01 log.45006595._032370.job.log.tgz.1
[2025-06-04 11:46:48] -rw-------. 1 boinc boinc        95 Jun  4 09:03 pilot_heartbeat.json
[2025-06-04 11:46:48] -rw-------. 1 boinc boinc      7692 Jun  4 09:03 heartbeat.json
[2025-06-04 11:46:48] -rw-------. 1 boinc boinc      4416 Jun  4 09:03 pilotlog.txt
[2025-06-04 11:46:48] -rw-------. 1 boinc boinc   1132023 Jun  4 09:03 log.45006595._032370.job.log.1
[2025-06-04 11:46:48] -rw-------. 1 boinc boinc       357 Jun  4 09:03 output.list
[2025-06-04 11:46:48] -rw-r--r--. 1 boinc boinc       620 Jun  4 09:03 runtime_log
[2025-06-04 11:46:48] -rw-------. 1 boinc boinc   1515520 Jun  4 09:03 result.tar.gz
[2025-06-04 11:46:48] -rw-------. 1 boinc boinc       657 Jun  4 09:03 zkCLDmbvfg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmccYKDmioOsQo.diag
[2025-06-04 11:46:48] -rw-r--r--. 1 boinc boinc      8659 Jun  4 09:03 runtime_log.err
[2025-06-04 11:46:48] -rw-r--r--. 1 boinc boinc      8192 Jun  4 11:46 boinc_mmap_file
[2025-06-04 11:46:48] -rw-r--r--. 1 boinc boinc        28 Jun  4 11:46 wrapper_checkpoint.txt
[2025-06-04 11:46:48] -rw-r--r--. 1 boinc boinc     20560 Jun  4 11:46 stderr.txt
[2025-06-04 11:46:48] HITS file was successfully produced:
[2025-06-04 11:46:48] -rw-------. 1 boinc boinc 177719253 Jun  4 09:00 shared/HITS.pool.root.1
[2025-06-04 11:46:48]  *** Contents of shared directory: ***
[2025-06-04 11:46:48] total 386240
[2025-06-04 11:46:48] -rw-r--r--. 2 boinc boinc 215740649 Jun  4 05:20 ATLAS.root_0
[2025-06-04 11:46:48] -rw-r--r--. 2 boinc boinc    508880 Jun  4 05:20 input.tar.gz
[2025-06-04 11:46:48] -rw-r--r--. 2 boinc boinc     15093 Jun  4 05:20 start_atlas.sh
[2025-06-04 11:46:48] -rw-------. 1 boinc boinc 177719253 Jun  4 09:00 HITS.pool.root.1
[2025-06-04 11:46:48] -rw-------. 1 boinc boinc   1515520 Jun  4 09:03 result.tar.gz
11:46:50 (4451): run_atlas exited; CPU time 45407.591221
11:46:50 (4451): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN