Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
19:34:43 (1458970): wrapper (7.7.26015): starting
19:34:43 (1458970): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 19:34:43] Arguments: --nthreads 12
[2025-06-05 19:34:43] Threads: 12
[2025-06-05 19:34:43] Checking for CVMFS
[2025-06-05 19:34:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 19:34:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 19:34:44] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 19:34:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 19:34:47] 2.12.7.0 359462 3486 63160 146830 3 56 2430503 4096001 912 130560 0 2962585 99.991 796837 135 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-05 19:34:47] CVMFS is ok
[2025-06-05 19:34:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 19:34:47] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-05 19:34:47] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-05 19:34:47] Further information can be found at the LHC@home message board.
[2025-06-05 19:34:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 19:34:47] Checking for apptainer binary...
[2025-06-05 19:34:47] apptainer is not installed, using version from CVMFS
[2025-06-05 19:34:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 19:34:47] ggg3250
[2025-06-05 19:34:47] apptainer works
[2025-06-05 19:34:47] Set ATHENA_PROC_NUMBER=12
[2025-06-05 19:34:47] Set ATHENA_CORE_NUMBER=12
[2025-06-05 19:34:48] Starting ATLAS job with PandaID=6677675850
[2025-06-05 19:34:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 23:47:22]  *** The last 200 lines of the pilot log: ***
[2025-06-05 23:47:22] 2025-06-05 23:47:08,667 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 23:47:22] 2025-06-05 23:47:08,667 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 23:47:22] 2025-06-05 23:47:08,679 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 23:47:22] 2025-06-05 23:47:08,679 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 23:47:22] 2025-06-05 23:47:08,681 | INFO     | fitting pss+swap vs Time
[2025-06-05 23:47:22] 2025-06-05 23:47:08,681 | INFO     | sum of square deviations: 4394577280.5
[2025-06-05 23:47:22] 2025-06-05 23:47:08,682 | INFO     | sum of deviations: 53178102888.50002
[2025-06-05 23:47:22] 2025-06-05 23:47:08,682 | INFO     | mean x: 1749159761.5
[2025-06-05 23:47:22] 2025-06-05 23:47:08,682 | INFO     | mean y: 2609330.367768595
[2025-06-05 23:47:22] 2025-06-05 23:47:08,682 | INFO     | -- intersect: -21163703565.804127
[2025-06-05 23:47:22] 2025-06-05 23:47:08,682 | INFO     | intersect: -21163703565.804127
[2025-06-05 23:47:22] 2025-06-05 23:47:08,682 | INFO     | chi2: 6.216970871534702
[2025-06-05 23:47:22] 2025-06-05 23:47:08,682 | INFO     | sum of square deviations: 4127772278.0
[2025-06-05 23:47:22] 2025-06-05 23:47:08,699 | INFO     | sum of deviations: 84547704645.00014
[2025-06-05 23:47:22] 2025-06-05 23:47:08,699 | INFO     | mean x: 1749159609.0
[2025-06-05 23:47:22] 2025-06-05 23:47:08,699 | INFO     | mean y: 2627025.6497890297
[2025-06-05 23:47:22] 2025-06-05 23:47:08,699 | INFO     | -- intersect: -35824792715.23542
[2025-06-05 23:47:22] 2025-06-05 23:47:08,699 | INFO     | intersect: -35824792715.23542
[2025-06-05 23:47:22] 2025-06-05 23:47:08,700 | INFO     | chi2: 4.848461158573655
[2025-06-05 23:47:22] 2025-06-05 23:47:08,700 | INFO     | current chi2=4.848461158573655 (change=22.01248391281623 %)
[2025-06-05 23:47:22] 2025-06-05 23:47:08,700 | INFO     | right removable region: 236
[2025-06-05 23:47:22] 2025-06-05 23:47:08,700 | INFO     | sum of square deviations: 4127772278.0
[2025-06-05 23:47:22] 2025-06-05 23:47:08,701 | INFO     | sum of deviations: -26328873313.999992
[2025-06-05 23:47:22] 2025-06-05 23:47:08,701 | INFO     | mean x: 1749159914.0
[2025-06-05 23:47:22] 2025-06-05 23:47:08,701 | INFO     | mean y: 2654686.2784810127
[2025-06-05 23:47:22] 2025-06-05 23:47:08,701 | INFO     | -- intersect: 11159619431.423542
[2025-06-05 23:47:22] 2025-06-05 23:47:08,701 | INFO     | intersect: 11159619431.423542
[2025-06-05 23:47:22] 2025-06-05 23:47:08,701 | INFO     | chi2: 2.439421900211314
[2025-06-05 23:47:22] 2025-06-05 23:47:08,701 | INFO     | current chi2=2.439421900211314 (change=60.761889501838276 %)
[2025-06-05 23:47:22] 2025-06-05 23:47:08,701 | INFO     | sum of square deviations: 3871990738.0
[2025-06-05 23:47:22] 2025-06-05 23:47:08,702 | INFO     | sum of deviations: -55607548333.0
[2025-06-05 23:47:22] 2025-06-05 23:47:08,702 | INFO     | mean x: 1749160066.5
[2025-06-05 23:47:22] 2025-06-05 23:47:08,702 | INFO     | mean y: 2672049.025862069
[2025-06-05 23:47:22] 2025-06-05 23:47:08,702 | INFO     | -- intersect: 25123213269.714146
[2025-06-05 23:47:22] 2025-06-05 23:47:08,702 | INFO     | intersect: 25123213269.714146
[2025-06-05 23:47:22] 2025-06-05 23:47:08,718 | INFO     | chi2: 1.8125979902081626
[2025-06-05 23:47:22] 2025-06-05 23:47:08,719 | INFO     | current chi2=1.8125979902081626 (change=25.69559246593848 %)
[2025-06-05 23:47:22] 2025-06-05 23:47:08,719 | INFO     | sum of square deviations: 3627000098.0
[2025-06-05 23:47:22] 2025-06-05 23:47:08,720 | INFO     | sum of deviations: -65191079847.0
[2025-06-05 23:47:22] 2025-06-05 23:47:08,720 | INFO     | mean x: 1749160219.0
[2025-06-05 23:47:22] 2025-06-05 23:47:08,720 | INFO     | mean y: 2677990.167400881
[2025-06-05 23:47:22] 2025-06-05 23:47:08,720 | INFO     | -- intersect: 31441784805.991096
[2025-06-05 23:47:22] 2025-06-05 23:47:08,720 | INFO     | intersect: 31441784805.991096
[2025-06-05 23:47:22] 2025-06-05 23:47:08,720 | INFO     | chi2: 1.7236403648893588
[2025-06-05 23:47:22] 2025-06-05 23:47:08,720 | INFO     | current chi2=1.7236403648893588 (change=4.907741584143968 %)
[2025-06-05 23:47:22] 2025-06-05 23:47:08,720 | INFO     | left removable region: 30
[2025-06-05 23:47:22] 2025-06-05 23:47:08,720 | INFO     | sum of square deviations: 2710627567.5
[2025-06-05 23:47:22] 2025-06-05 23:47:08,721 | INFO     | sum of deviations: -4542774767.499999
[2025-06-05 23:47:22] 2025-06-05 23:47:08,721 | INFO     | mean x: 1749160493.5
[2025-06-05 23:47:22] 2025-06-05 23:47:08,721 | INFO     | mean y: 2677626.3155339807
[2025-06-05 23:47:22] 2025-06-05 23:47:08,721 | INFO     | -- intersect: 2934117654.9832296
[2025-06-05 23:47:22] 2025-06-05 23:47:08,721 | INFO     | intersect: 2934117654.9832296
[2025-06-05 23:47:22] 2025-06-05 23:47:08,721 | INFO     | chi2: 0.1025595693754468
[2025-06-05 23:47:22] 2025-06-05 23:47:08,721 | INFO     | -- intersect: 2934117654.9832296
[2025-06-05 23:47:22] 2025-06-05 23:47:08,721 | INFO     | current memory leak: -1.68 B/s (using 206 data points, chi2=0.10)
[2025-06-05 23:47:22] 2025-06-05 23:47:08,722 | INFO     | ..............................
[2025-06-05 23:47:22] 2025-06-05 23:47:08,722 | INFO     | . Timing measurements:
[2025-06-05 23:47:22] 2025-06-05 23:47:08,722 | INFO     | . get job = 0 s
[2025-06-05 23:47:22] 2025-06-05 23:47:08,722 | INFO     | . initial setup = 22 s
[2025-06-05 23:47:22] 2025-06-05 23:47:08,722 | INFO     | . payload setup = 121 s
[2025-06-05 23:47:22] 2025-06-05 23:47:08,722 | INFO     | . stage-in = 0 s
[2025-06-05 23:47:22] 2025-06-05 23:47:08,722 | INFO     | . payload execution = 14742 s
[2025-06-05 23:47:22] 2025-06-05 23:47:08,722 | INFO     | . stage-out = 80 s
[2025-06-05 23:47:22] 2025-06-05 23:47:08,722 | INFO     | . log creation = 78 s
[2025-06-05 23:47:22] 2025-06-05 23:47:08,722 | INFO     | ..............................
[2025-06-05 23:47:22] 2025-06-05 23:47:08,958 | INFO     | 
[2025-06-05 23:47:22] 2025-06-05 23:47:08,959 | INFO     | job summary report
[2025-06-05 23:47:22] 2025-06-05 23:47:08,959 | INFO     | --------------------------------------------------
[2025-06-05 23:47:22] 2025-06-05 23:47:08,959 | INFO     | PanDA job id: 6677675850
[2025-06-05 23:47:22] 2025-06-05 23:47:08,959 | INFO     | task id: 45006595
[2025-06-05 23:47:22] 2025-06-05 23:47:08,959 | INFO     | errors: (none)
[2025-06-05 23:47:22] 2025-06-05 23:47:08,959 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 23:47:22] 2025-06-05 23:47:08,959 | INFO     | pilot state: finished 
[2025-06-05 23:47:22] 2025-06-05 23:47:08,959 | INFO     | transexitcode: 0
[2025-06-05 23:47:22] 2025-06-05 23:47:08,959 | INFO     | exeerrorcode: 0
[2025-06-05 23:47:22] 2025-06-05 23:47:08,959 | INFO     | exeerrordiag: 
[2025-06-05 23:47:22] 2025-06-05 23:47:08,959 | INFO     | exitcode: 0
[2025-06-05 23:47:22] 2025-06-05 23:47:08,959 | INFO     | exitmsg: OK
[2025-06-05 23:47:22] 2025-06-05 23:47:08,959 | INFO     | cpuconsumptiontime: 21610 s
[2025-06-05 23:47:22] 2025-06-05 23:47:08,959 | INFO     | nevents: 400
[2025-06-05 23:47:22] 2025-06-05 23:47:08,959 | INFO     | neventsw: 0
[2025-06-05 23:47:22] 2025-06-05 23:47:08,959 | INFO     | pid: 1468981
[2025-06-05 23:47:22] 2025-06-05 23:47:08,959 | INFO     | pgrp: 1468981
[2025-06-05 23:47:22] 2025-06-05 23:47:08,959 | INFO     | corecount: 12
[2025-06-05 23:47:22] 2025-06-05 23:47:08,959 | INFO     | event service: False
[2025-06-05 23:47:22] 2025-06-05 23:47:08,959 | INFO     | sizes: {0: 2397194, 1: 2397393, 2: 2397393, 12: 2397421, 23: 2397449, 34: 2397477, 36: 2397839, 45: 2397867, 14868: 2427804, 14949: 2436961, 14950: 2437017, 14975:
[2025-06-05 23:47:22] 2025-06-05 23:47:08,960 | INFO     | --------------------------------------------------
[2025-06-05 23:47:22] 2025-06-05 23:47:08,960 | INFO     | 
[2025-06-05 23:47:22] 2025-06-05 23:47:08,960 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/0
[2025-06-05 23:47:22] 2025-06-05 23:47:09,031 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 23:47:22] 2025-06-05 23:47:09,031 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 23:47:22] 2025-06-05 23:47:09,031 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 23:47:22] 2025-06-05 23:47:09,031 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 23:47:22] 2025-06-05 23:47:09,031 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 23:47:22] 2025-06-05 23:47:09,031 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 23:47:22] 2025-06-05 23:47:09,031 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 23:47:22] 2025-06-05 23:47:09,031 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 23:47:22] 2025-06-05 23:47:09,031 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 23:47:22] 2025-06-05 23:47:09,031 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 23:47:22] 2025-06-05 23:47:09,031 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 23:47:22] 2025-06-05 23:47:09,031 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 23:47:22] 2025-06-05 23:47:09,031 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 23:47:22] 2025-06-05 23:47:09,031 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 23:47:22] 2025-06-05 23:47:09,031 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 23:47:22] 2025-06-05 23:47:09,031 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 23:47:22] 2025-06-05 23:47:09,032 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 23:47:22] 2025-06-05 23:47:09,032 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 23:47:22] 2025-06-05 23:47:09,032 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 23:47:22] 2025-06-05 23:47:09,032 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 23:47:22] 2025-06-05 23:47:09,032 | INFO     | job 6677675850 has completed (purged errors)
[2025-06-05 23:47:22] 2025-06-05 23:47:09,032 | INFO     | overall cleanup function is called
[2025-06-05 23:47:22] 2025-06-05 23:47:10,038 | INFO     | --- collectZombieJob: --- 10, [1468981]
[2025-06-05 23:47:22] 2025-06-05 23:47:10,039 | INFO     | zombie collector waiting for pid 1468981
[2025-06-05 23:47:22] 2025-06-05 23:47:10,039 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 23:47:22] 2025-06-05 23:47:10,039 | INFO     | collected zombie processes
[2025-06-05 23:47:22] 2025-06-05 23:47:10,039 | INFO     | will attempt to kill all subprocesses of pid=1468981
[2025-06-05 23:47:22] 2025-06-05 23:47:10,224 | INFO     | process IDs to be killed: [1468981] (in reverse order)
[2025-06-05 23:47:22] 2025-06-05 23:47:10,847 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 23:47:22] 2025-06-05 23:47:10,847 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 23:47:22] 2025-06-05 23:47:10,848 | INFO     | did not find any defunct processes belonging to 1468981
[2025-06-05 23:47:22] 2025-06-05 23:47:10,849 | INFO     | did not find any defunct processes belonging to 1468981
[2025-06-05 23:47:22] 2025-06-05 23:47:10,849 | INFO     | ready for new job
[2025-06-05 23:47:22] 2025-06-05 23:47:10,849 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 23:47:22] 2025-06-05 23:47:10,850 | INFO     | **************************************
[2025-06-05 23:47:22] 2025-06-05 23:47:10,850 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 23:47:22] 2025-06-05 23:47:10,850 | INFO     | **************************************
[2025-06-05 23:47:22] 2025-06-05 23:47:10,850 | INFO     | 
[2025-06-05 23:47:22] 2025-06-05 23:47:10,871 | INFO     | architecture information:
[2025-06-05 23:47:22] 2025-06-05 23:47:10,871 | INFO     | executing command: cat /etc/os-release
[2025-06-05 23:47:22] 2025-06-05 23:47:10,959 | INFO     | cat /etc/os-release:
[2025-06-05 23:47:22] NAME="CentOS Linux"
[2025-06-05 23:47:22] VERSION="7 (Core)"
[2025-06-05 23:47:22] ID="centos"
[2025-06-05 23:47:22] ID_LIKE="rhel fedora"
[2025-06-05 23:47:22] VERSION_ID="7"
[2025-06-05 23:47:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 23:47:22] ANSI_COLOR="0;31"
[2025-06-05 23:47:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 23:47:22] HOME_URL="https://www.centos.org/"
[2025-06-05 23:47:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 23:47:22] 
[2025-06-05 23:47:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 23:47:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 23:47:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 23:47:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 23:47:22] 
[2025-06-05 23:47:22] 2025-06-05 23:47:10,959 | INFO     | **************************************
[2025-06-05 23:47:22] 2025-06-05 23:47:11,463 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/0
[2025-06-05 23:47:22] 2025-06-05 23:47:11,559 | INFO     | sufficient remaining disk space (187862876160 B)
[2025-06-05 23:47:22] 2025-06-05 23:47:11,560 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 23:47:22] 2025-06-05 23:47:11,560 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 23:47:22] 2025-06-05 23:47:11,560 | INFO     | update_server=False
[2025-06-05 23:47:22] 2025-06-05 23:47:11,560 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 23:47:22] 2025-06-05 23:47:11,560 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 23:47:22] 2025-06-05 23:47:11,560 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 23:47:22] 2025-06-05 23:47:11,560 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 23:47:22] 2025-06-05 23:47:11,560 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 23:47:22] 2025-06-05 23:47:11,562 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 23:47:22] 2025-06-05 23:47:11,750 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 23:47:22] 2025-06-05 23:47:11,810 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 23:47:22] 2025-06-05 23:47:11,811 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 23:47:22] 2025-06-05 23:47:11,811 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 23:47:22] 2025-06-05 23:47:11,811 | INFO     | will abort loop
[2025-06-05 23:47:22] 2025-06-05 23:47:12,368 | INFO     | all job control threads have been joined
[2025-06-05 23:47:22] 2025-06-05 23:47:12,563 | INFO     | [job] retrieve thread has finished
[2025-06-05 23:47:22] 2025-06-05 23:47:12,678 | INFO     | all data control threads have been joined
[2025-06-05 23:47:22] 2025-06-05 23:47:12,815 | INFO     | [payload] failed_post thread has finished
[2025-06-05 23:47:22] 2025-06-05 23:47:12,815 | INFO     | [job] job monitor thread has finished
[2025-06-05 23:47:22] 2025-06-05 23:47:12,974 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 23:47:22] 2025-06-05 23:47:12,975 | INFO     | [data] copytool_in thread has finished
[2025-06-05 23:47:22] 2025-06-05 23:47:12,990 | INFO     | all payload control threads have been joined
[2025-06-05 23:47:22] 2025-06-05 23:47:13,239 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 23:47:22] 2025-06-05 23:47:13,374 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 23:47:22] 2025-06-05 23:47:13,375 | INFO     | [job] control thread has finished
[2025-06-05 23:47:22] 2025-06-05 23:47:13,570 | INFO     | [data] copytool_out thread has finished
[2025-06-05 23:47:22] 2025-06-05 23:47:13,682 | INFO     | [data] control thread has finished
[2025-06-05 23:47:22] 2025-06-05 23:47:13,686 | INFO     | [job] validate thread has finished
[2025-06-05 23:47:22] 2025-06-05 23:47:13,974 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 23:47:22] 2025-06-05 23:47:13,994 | INFO     | [payload] control thread has finished
[2025-06-05 23:47:22] 2025-06-05 23:47:14,030 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 23:47:22] 2025-06-05 23:47:14,170 | INFO     | [payload] validate_post thread has finished
[2025-06-05 23:47:22] 2025-06-05 23:47:14,978 | INFO     | [job] queue monitor thread has finished
[2025-06-05 23:47:22] 2025-06-05 23:47:15,770 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 23:47:22] 2025-06-05 23:47:16,798 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139637112497984)>', '<ExcThread(monitor, started 139636676478720)>']
[2025-06-05 23:47:22] 2025-06-05 23:47:17,586 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 23:47:22] 2025-06-05 23:47:17,587 | INFO     | [monitor] control thread has ended
[2025-06-05 23:47:22] 2025-06-05 23:47:21,822 | INFO     | all workflow threads have been joined
[2025-06-05 23:47:22] 2025-06-05 23:47:21,823 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 23:47:22] 2025-06-05 23:47:21,823 | INFO     | traces error code: 0
[2025-06-05 23:47:22] 2025-06-05 23:47:21,823 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 23:47:22] 2025-06-05 23:47:22,163 [wrapper] ==== pilot stdout END ====
[2025-06-05 23:47:22] 2025-06-05 23:47:22,191 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 23:47:22] 2025-06-05 23:47:22,227 [wrapper] pilotpid: 1462554
[2025-06-05 23:47:22] 2025-06-05 23:47:22,259 [wrapper] Pilot exit status: 0
[2025-06-05 23:47:22] 2025-06-05 23:47:22,415 [wrapper] pandaids: 6677675850
[2025-06-05 23:47:22] 2025-06-05 23:47:22,483 [wrapper] cleanup supervisor_pilot 1527951 1462555
[2025-06-05 23:47:22] 2025-06-05 23:47:22,511 [wrapper] Test setup, not cleaning
[2025-06-05 23:47:22] 2025-06-05 23:47:22,542 [wrapper] apfmon messages muted
[2025-06-05 23:47:22] 2025-06-05 23:47:22,571 [wrapper] ==== wrapper stdout END ====
[2025-06-05 23:47:22] 2025-06-05 23:47:22,583 [wrapper] ==== wrapper stderr END ====
[2025-06-05 23:47:22]  *** Error codes and diagnostics ***
[2025-06-05 23:47:22]     "exeErrorCode": 0,
[2025-06-05 23:47:22]     "exeErrorDiag": "",
[2025-06-05 23:47:22]     "pilotErrorCode": 0,
[2025-06-05 23:47:22]     "pilotErrorDiag": "",
[2025-06-05 23:47:22]  *** Listing of results directory ***
[2025-06-05 23:47:23] total 386920
[2025-06-05 23:47:23] -rw-r--r-- 1 boinc boinc    495897 Jun  3 14:52 pilot3.tar.gz
[2025-06-05 23:47:23] -rw-r--r-- 1 boinc boinc      5111 Jun  3 14:56 queuedata.json
[2025-06-05 23:47:23] -rwx------ 1 boinc boinc     37140 Jun  3 14:56 runpilot2-wrapper.sh
[2025-06-05 23:47:23] -rw-rw-r-- 1 boinc boinc       100 Jun  5 19:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 23:47:23] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 19:34 run_atlas
[2025-06-05 23:47:23] -rw-rw-r-- 1 boinc boinc       105 Jun  5 19:34 job.xml
[2025-06-05 23:47:23] -rw-rw-r-- 1 boinc boinc      9361 Jun  5 19:34 init_data.xml
[2025-06-05 23:47:23] -rw-r--r-- 2 boinc boinc 212637074 Jun  5 19:34 EVNT.45006593._001452.pool.root.1
[2025-06-05 23:47:23] -rw-r--r-- 2 boinc boinc     15093 Jun  5 19:34 start_atlas.sh
[2025-06-05 23:47:23] drwxrwx--x 2 boinc boinc      4096 Jun  5 19:34 shared
[2025-06-05 23:47:23] -rw-r--r-- 2 boinc boinc    508873 Jun  5 19:34 input.tar.gz
[2025-06-05 23:47:23] -rw-rw-r-- 1 boinc boinc         0 Jun  5 19:34 boinc_lockfile
[2025-06-05 23:47:23] -rw-rw-r-- 1 boinc boinc      2525 Jun  5 19:34 pandaJob.out
[2025-06-05 23:47:23] -rw------- 1 boinc boinc    987599 Jun  5 19:36 agis_schedconf.cvmfs.json
[2025-06-05 23:47:23] drwx------ 4 boinc boinc      4096 Jun  5 19:36 pilot3
[2025-06-05 23:47:23] -rw------- 1 boinc boinc 176092722 Jun  5 23:43 HITS.45006595._036150.pool.root.1
[2025-06-05 23:47:23] -rw-rw-r-- 1 boinc boinc       530 Jun  5 23:44 boinc_task_state.xml
[2025-06-05 23:47:23] -rw------- 1 boinc boinc      1018 Jun  5 23:45 memory_monitor_summary.json
[2025-06-05 23:47:23] -rw------- 1 boinc boinc   1598969 Jun  5 23:45 agis_ddmendpoints.agis.ALL.json
[2025-06-05 23:47:23] -rw------- 1 boinc boinc        95 Jun  5 23:46 pilot_heartbeat.json
[2025-06-05 23:47:23] -rw------- 1 boinc boinc    468012 Jun  5 23:46 log.45006595._036150.job.log.tgz.1
[2025-06-05 23:47:23] -rw-rw-r-- 1 boinc boinc        28 Jun  5 23:47 wrapper_checkpoint.txt
[2025-06-05 23:47:23] -rw-rw-r-- 1 boinc boinc      8192 Jun  5 23:47 boinc_mmap_file
[2025-06-05 23:47:23] -rw------- 1 boinc boinc      7670 Jun  5 23:47 heartbeat.json
[2025-06-05 23:47:23] -rw------- 1 boinc boinc      4686 Jun  5 23:47 pilotlog.txt
[2025-06-05 23:47:23] -rw------- 1 boinc boinc   1348605 Jun  5 23:47 log.45006595._036150.job.log.1
[2025-06-05 23:47:23] -rw------- 1 boinc boinc       357 Jun  5 23:47 output.list
[2025-06-05 23:47:23] -rw-rw-r-- 1 boinc boinc       620 Jun  5 23:47 runtime_log
[2025-06-05 23:47:23] -rw------- 1 boinc boinc   1832960 Jun  5 23:47 result.tar.gz
[2025-06-05 23:47:23] -rw-rw-r-- 1 boinc boinc      8959 Jun  5 23:47 runtime_log.err
[2025-06-05 23:47:23] -rw------- 1 boinc boinc       653 Jun  5 23:47 ik7LDm1Eig7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmigkKDmwsRaYm.diag
[2025-06-05 23:47:23] -rw-rw-r-- 1 boinc boinc     21028 Jun  5 23:47 stderr.txt
[2025-06-05 23:47:23] HITS file was successfully produced:
[2025-06-05 23:47:23] -rw------- 1 boinc boinc 176092722 Jun  5 23:43 shared/HITS.pool.root.1
[2025-06-05 23:47:23]  *** Contents of shared directory: ***
[2025-06-05 23:47:23] total 381940
[2025-06-05 23:47:23] -rw-r--r-- 2 boinc boinc 212637074 Jun  5 19:34 ATLAS.root_0
[2025-06-05 23:47:23] -rw-r--r-- 2 boinc boinc     15093 Jun  5 19:34 start_atlas.sh
[2025-06-05 23:47:23] -rw-r--r-- 2 boinc boinc    508873 Jun  5 19:34 input.tar.gz
[2025-06-05 23:47:23] -rw------- 1 boinc boinc 176092722 Jun  5 23:43 HITS.pool.root.1
[2025-06-05 23:47:23] -rw------- 1 boinc boinc   1832960 Jun  5 23:47 result.tar.gz
23:47:24 (1458970): run_atlas exited; CPU time 21670.612307
23:47:24 (1458970): called boinc_finish(0)

</stderr_txt>
]]>

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