Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
03:55:56 (1337891): wrapper (7.7.26015): starting
03:55:56 (1337891): wrapper: running run_atlas (--nthreads 2)
[2025-06-04 03:55:56] Arguments: --nthreads 2
[2025-06-04 03:55:56] Threads: 2
[2025-06-04 03:55:56] Checking for CVMFS
[2025-06-04 03:55:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 03:55:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 03:55:56] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 03:55:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 03:55:57] 2.9.2.0 906415 1825 55744 146763 0 55 29509696 36864000 0 130560 0 1170252 99.990 443632 66973 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 03:55:57] CVMFS is ok
[2025-06-04 03:55:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 03:55:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 03:55:57] Further information can be found at the LHC@home message board.
[2025-06-04 03:55:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 03:55:57] Checking for apptainer binary...
[2025-06-04 03:55:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 03:55:57] Running /usr/bin/apptainer --version
[2025-06-04 03:55:57] apptainer version 1.3.6-6.1
[2025-06-04 03:55:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 03:55:57] madmaxA275
[2025-06-04 03:55:57] apptainer works
[2025-06-04 03:55:57] Set ATHENA_PROC_NUMBER=2
[2025-06-04 03:55:57] Set ATHENA_CORE_NUMBER=2
[2025-06-04 03:55:57] Starting ATLAS job with PandaID=6677637413
[2025-06-04 03:55:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 05:47:41]  *** The last 200 lines of the pilot log: ***
[2025-06-04 05:47:41] 2025-06-04 03:47:17,879 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677637413/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 05:47:41] 2025-06-04 03:47:17,927 | INFO     | number of running child processes to parent process 1347972: 1
[2025-06-04 05:47:41] 2025-06-04 03:47:17,927 | INFO     | maximum number of monitored processes: 6
[2025-06-04 05:47:41] 2025-06-04 03:47:20,430 | INFO     | monitor loop #514: job 0:6677637413 is in state 'finished'
[2025-06-04 05:47:41] 2025-06-04 03:47:20,430 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:47:41] 2025-06-04 03:47:22,473 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 05:47:41] 2025-06-04 03:47:22,473 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677637413/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 05:47:41] 2025-06-04 03:47:22,473 | INFO     | extracted standard info from prmon json
[2025-06-04 05:47:41] 2025-06-04 03:47:22,473 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 05:47:41] 2025-06-04 03:47:22,473 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 05:47:41] 2025-06-04 03:47:22,473 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 05:47:41] 2025-06-04 03:47:22,473 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 05:47:41] 2025-06-04 03:47:22,474 | INFO     | fitting pss+swap vs Time
[2025-06-04 05:47:41] 2025-06-04 03:47:22,475 | INFO     | sum of square deviations: 401533110.0
[2025-06-04 05:47:41] 2025-06-04 03:47:22,475 | INFO     | sum of deviations: -8780633654.0
[2025-06-04 05:47:41] 2025-06-04 03:47:22,475 | INFO     | mean x: 1749005495.0
[2025-06-04 05:47:41] 2025-06-04 03:47:22,475 | INFO     | mean y: 2386086.981651376
[2025-06-04 05:47:41] 2025-06-04 03:47:22,475 | INFO     | -- intersect: 38249235793.66693
[2025-06-04 05:47:41] 2025-06-04 03:47:22,475 | INFO     | intersect: 38249235793.66693
[2025-06-04 05:47:41] 2025-06-04 03:47:22,475 | INFO     | chi2: 1.5484990835832149
[2025-06-04 05:47:41] 2025-06-04 03:47:22,475 | INFO     | sum of square deviations: 348769330.0
[2025-06-04 05:47:41] 2025-06-04 03:47:22,475 | INFO     | sum of deviations: -7429492072.0
[2025-06-04 05:47:41] 2025-06-04 03:47:22,475 | INFO     | mean x: 1749005342.5
[2025-06-04 05:47:41] 2025-06-04 03:47:22,475 | INFO     | mean y: 2389994.8076923075
[2025-06-04 05:47:41] 2025-06-04 03:47:22,475 | INFO     | -- intersect: 37259740937.8777
[2025-06-04 05:47:41] 2025-06-04 03:47:22,475 | INFO     | intersect: 37259740937.8777
[2025-06-04 05:47:41] 2025-06-04 03:47:22,476 | INFO     | chi2: 1.5497545094130307
[2025-06-04 05:47:41] 2025-06-04 03:47:22,476 | INFO     | current chi2=1.5497545094130307 (change=-0.0810737212004552 %)
[2025-06-04 05:47:41] 2025-06-04 03:47:22,476 | INFO     | right removable region: 103
[2025-06-04 05:47:41] 2025-06-04 03:47:22,476 | INFO     | sum of square deviations: 348769330.0
[2025-06-04 05:47:41] 2025-06-04 03:47:22,476 | INFO     | sum of deviations: -22064408606.500004
[2025-06-04 05:47:41] 2025-06-04 03:47:22,476 | INFO     | mean x: 1749005647.5
[2025-06-04 05:47:41] 2025-06-04 03:47:22,476 | INFO     | mean y: 2423377.951923077
[2025-06-04 05:47:41] 2025-06-04 03:47:22,476 | INFO     | -- intersect: 110650843241.92366
[2025-06-04 05:47:41] 2025-06-04 03:47:22,476 | INFO     | intersect: 110650843241.92366
[2025-06-04 05:47:41] 2025-06-04 03:47:22,476 | INFO     | chi2: 0.06910137386343476
[2025-06-04 05:47:41] 2025-06-04 03:47:22,476 | INFO     | current chi2=0.06910137386343476 (change=95.537525685612 %)
[2025-06-04 05:47:41] 2025-06-04 03:47:22,476 | INFO     | sum of square deviations: 300842850.0
[2025-06-04 05:47:41] 2025-06-04 03:47:22,476 | INFO     | sum of deviations: -18087801129.999996
[2025-06-04 05:47:41] 2025-06-04 03:47:22,477 | INFO     | mean x: 1749005800.0
[2025-06-04 05:47:41] 2025-06-04 03:47:22,477 | INFO     | mean y: 2410706.9191919193
[2025-06-04 05:47:41] 2025-06-04 03:47:22,477 | INFO     | -- intersect: 105159202984.40408
[2025-06-04 05:47:41] 2025-06-04 03:47:22,477 | INFO     | intersect: 105159202984.40408
[2025-06-04 05:47:41] 2025-06-04 03:47:22,477 | INFO     | chi2: 0.0655833299690115
[2025-06-04 05:47:41] 2025-06-04 03:47:22,477 | INFO     | current chi2=0.0655833299690115 (change=5.091134514019903 %)
[2025-06-04 05:47:41] 2025-06-04 03:47:22,477 | INFO     | left removable region: 20
[2025-06-04 05:47:41] 2025-06-04 03:47:22,477 | INFO     | sum of square deviations: 177275882.0
[2025-06-04 05:47:41] 2025-06-04 03:47:22,477 | INFO     | sum of deviations: -11748990278.0
[2025-06-04 05:47:41] 2025-06-04 03:47:22,477 | INFO     | mean x: 1749005922.0
[2025-06-04 05:47:41] 2025-06-04 03:47:22,477 | INFO     | mean y: 2399179.4096385543
[2025-06-04 05:47:41] 2025-06-04 03:47:22,477 | INFO     | -- intersect: 115918074464.23167
[2025-06-04 05:47:41] 2025-06-04 03:47:22,477 | INFO     | intersect: 115918074464.23167
[2025-06-04 05:47:41] 2025-06-04 03:47:22,477 | INFO     | chi2: 0.05453778030826694
[2025-06-04 05:47:41] 2025-06-04 03:47:22,477 | INFO     | -- intersect: 115918074464.23167
[2025-06-04 05:47:41] 2025-06-04 03:47:22,477 | INFO     | current memory leak: -66.28 B/s (using 83 data points, chi2=0.05)
[2025-06-04 05:47:41] 2025-06-04 03:47:22,478 | INFO     | ..............................
[2025-06-04 05:47:41] 2025-06-04 03:47:22,478 | INFO     | . Timing measurements:
[2025-06-04 05:47:41] 2025-06-04 03:47:22,478 | INFO     | . get job = 0 s
[2025-06-04 05:47:41] 2025-06-04 03:47:22,478 | INFO     | . initial setup = 1 s
[2025-06-04 05:47:41] 2025-06-04 03:47:22,478 | INFO     | . payload setup = 8 s
[2025-06-04 05:47:41] 2025-06-04 03:47:22,478 | INFO     | . stage-in = 0 s
[2025-06-04 05:47:41] 2025-06-04 03:47:22,478 | INFO     | . payload execution = 6630 s
[2025-06-04 05:47:41] 2025-06-04 03:47:22,478 | INFO     | . stage-out = 0 s
[2025-06-04 05:47:41] 2025-06-04 03:47:22,478 | INFO     | . log creation = 0 s
[2025-06-04 05:47:41] 2025-06-04 03:47:22,478 | INFO     | ..............................
[2025-06-04 05:47:41] 2025-06-04 03:47:22,507 | INFO     | 
[2025-06-04 05:47:41] 2025-06-04 03:47:22,507 | INFO     | job summary report
[2025-06-04 05:47:41] 2025-06-04 03:47:22,507 | INFO     | --------------------------------------------------
[2025-06-04 05:47:41] 2025-06-04 03:47:22,507 | INFO     | PanDA job id: 6677637413
[2025-06-04 05:47:41] 2025-06-04 03:47:22,507 | INFO     | task id: 45006595
[2025-06-04 05:47:41] 2025-06-04 03:47:22,507 | INFO     | errors: (none)
[2025-06-04 05:47:41] 2025-06-04 03:47:22,507 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 05:47:41] 2025-06-04 03:47:22,507 | INFO     | pilot state: finished 
[2025-06-04 05:47:41] 2025-06-04 03:47:22,508 | INFO     | transexitcode: 0
[2025-06-04 05:47:41] 2025-06-04 03:47:22,508 | INFO     | exeerrorcode: 0
[2025-06-04 05:47:41] 2025-06-04 03:47:22,508 | INFO     | exeerrordiag: 
[2025-06-04 05:47:41] 2025-06-04 03:47:22,508 | INFO     | exitcode: 0
[2025-06-04 05:47:41] 2025-06-04 03:47:22,508 | INFO     | exitmsg: OK
[2025-06-04 05:47:41] 2025-06-04 03:47:22,508 | INFO     | cpuconsumptiontime: 12878 s
[2025-06-04 05:47:41] 2025-06-04 03:47:22,508 | INFO     | nevents: 400
[2025-06-04 05:47:41] 2025-06-04 03:47:22,508 | INFO     | neventsw: 0
[2025-06-04 05:47:41] 2025-06-04 03:47:22,508 | INFO     | pid: 1347972
[2025-06-04 05:47:41] 2025-06-04 03:47:22,508 | INFO     | pgrp: 1347972
[2025-06-04 05:47:41] 2025-06-04 03:47:22,508 | INFO     | corecount: 2
[2025-06-04 05:47:41] 2025-06-04 03:47:22,508 | INFO     | event service: False
[2025-06-04 05:47:41] 2025-06-04 03:47:22,508 | INFO     | sizes: {0: 2405187, 8: 2405393, 11: 2405421, 6643: 2441437, 6644: 2441437, 6654: 2441607}
[2025-06-04 05:47:41] 2025-06-04 03:47:22,508 | INFO     | --------------------------------------------------
[2025-06-04 05:47:41] 2025-06-04 03:47:22,508 | INFO     | 
[2025-06-04 05:47:41] 2025-06-04 03:47:22,508 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 05:47:41] 2025-06-04 03:47:22,519 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 05:47:41] 2025-06-04 03:47:22,519 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 05:47:41] 2025-06-04 03:47:22,519 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 05:47:41] 2025-06-04 03:47:22,519 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 05:47:41] 2025-06-04 03:47:22,519 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 05:47:41] 2025-06-04 03:47:22,519 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 05:47:41] 2025-06-04 03:47:22,519 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 05:47:41] 2025-06-04 03:47:22,519 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 05:47:41] 2025-06-04 03:47:22,519 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 05:47:41] 2025-06-04 03:47:22,519 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 05:47:41] 2025-06-04 03:47:22,519 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 05:47:41] 2025-06-04 03:47:22,519 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 05:47:41] 2025-06-04 03:47:22,519 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 05:47:41] 2025-06-04 03:47:22,519 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 05:47:41] 2025-06-04 03:47:22,519 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 05:47:41] 2025-06-04 03:47:22,519 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 05:47:41] 2025-06-04 03:47:22,519 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 05:47:41] 2025-06-04 03:47:22,519 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 05:47:41] 2025-06-04 03:47:22,519 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 05:47:41] 2025-06-04 03:47:22,519 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 05:47:41] 2025-06-04 03:47:22,520 | INFO     | job 6677637413 has completed (purged errors)
[2025-06-04 05:47:41] 2025-06-04 03:47:22,520 | INFO     | overall cleanup function is called
[2025-06-04 05:47:41] 2025-06-04 03:47:23,526 | INFO     | --- collectZombieJob: --- 10, [1347972]
[2025-06-04 05:47:41] 2025-06-04 03:47:23,526 | INFO     | zombie collector waiting for pid 1347972
[2025-06-04 05:47:41] 2025-06-04 03:47:23,526 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 05:47:41] 2025-06-04 03:47:23,527 | INFO     | collected zombie processes
[2025-06-04 05:47:41] 2025-06-04 03:47:23,527 | INFO     | will attempt to kill all subprocesses of pid=1347972
[2025-06-04 05:47:41] 2025-06-04 03:47:23,559 | INFO     | process IDs to be killed: [1347972] (in reverse order)
[2025-06-04 05:47:41] 2025-06-04 03:47:23,580 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 05:47:41] 2025-06-04 03:47:23,580 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 05:47:41] 2025-06-04 03:47:23,581 | INFO     | did not find any defunct processes belonging to 1347972
[2025-06-04 05:47:41] 2025-06-04 03:47:23,582 | INFO     | did not find any defunct processes belonging to 1347972
[2025-06-04 05:47:41] 2025-06-04 03:47:23,582 | INFO     | ready for new job
[2025-06-04 05:47:41] 2025-06-04 03:47:23,582 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 05:47:41] 2025-06-04 03:47:23,582 | INFO     | **************************************
[2025-06-04 05:47:41] 2025-06-04 03:47:23,582 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 05:47:41] 2025-06-04 03:47:23,582 | INFO     | **************************************
[2025-06-04 05:47:41] 2025-06-04 03:47:23,582 | INFO     | 
[2025-06-04 05:47:41] 2025-06-04 03:47:23,582 | INFO     | architecture information:
[2025-06-04 05:47:41] 2025-06-04 03:47:23,583 | INFO     | executing command: cat /etc/os-release
[2025-06-04 05:47:41] 2025-06-04 03:47:23,592 | INFO     | cat /etc/os-release:
[2025-06-04 05:47:41] NAME="CentOS Linux"
[2025-06-04 05:47:41] VERSION="7 (Core)"
[2025-06-04 05:47:41] ID="centos"
[2025-06-04 05:47:41] ID_LIKE="rhel fedora"
[2025-06-04 05:47:41] VERSION_ID="7"
[2025-06-04 05:47:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 05:47:41] ANSI_COLOR="0;31"
[2025-06-04 05:47:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 05:47:41] HOME_URL="https://www.centos.org/"
[2025-06-04 05:47:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 05:47:41] 
[2025-06-04 05:47:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 05:47:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 05:47:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 05:47:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 05:47:41] 
[2025-06-04 05:47:41] 2025-06-04 03:47:23,592 | INFO     | **************************************
[2025-06-04 05:47:41] 2025-06-04 03:47:23,627 | INFO     | PID=1341511 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 05:47:41] 2025-06-04 03:47:24,095 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 05:47:41] 2025-06-04 03:47:24,107 | INFO     | sufficient remaining disk space (250201767936 B)
[2025-06-04 05:47:41] 2025-06-04 03:47:24,107 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 05:47:41] 2025-06-04 03:47:24,107 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 05:47:41] 2025-06-04 03:47:24,107 | INFO     | update_server=False
[2025-06-04 05:47:41] 2025-06-04 03:47:24,107 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 05:47:41] 2025-06-04 03:47:24,107 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:47:41] 2025-06-04 03:47:24,108 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:47:41] 2025-06-04 03:47:24,108 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 05:47:41] 2025-06-04 03:47:24,108 | INFO     | aborting loop
[2025-06-04 05:47:41] 2025-06-04 03:47:24,108 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 05:47:41] 2025-06-04 03:47:24,108 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 05:47:41] 2025-06-04 03:47:24,108 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 05:47:41] 2025-06-04 03:47:24,352 | INFO     | all data control threads have been joined
[2025-06-04 05:47:41] 2025-06-04 03:47:24,982 | INFO     | all payload control threads have been joined
[2025-06-04 05:47:41] 2025-06-04 03:47:25,113 | INFO     | [job] retrieve thread has finished
[2025-06-04 05:47:41] 2025-06-04 03:47:25,114 | INFO     | [job] queue monitor thread has finished
[2025-06-04 05:47:41] 2025-06-04 03:47:25,114 | INFO     | [job] job monitor thread has finished
[2025-06-04 05:47:41] 2025-06-04 03:47:25,190 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 05:47:41] 2025-06-04 03:47:25,245 | INFO     | [payload] failed_post thread has finished
[2025-06-04 05:47:41] 2025-06-04 03:47:25,357 | INFO     | [data] control thread has finished
[2025-06-04 05:47:41] 2025-06-04 03:47:25,582 | INFO     | all job control threads have been joined
[2025-06-04 05:47:41] 2025-06-04 03:47:25,704 | INFO     | [payload] validate_post thread has finished
[2025-06-04 05:47:41] 2025-06-04 03:47:25,988 | INFO     | [payload] control thread has finished
[2025-06-04 05:47:41] 2025-06-04 03:47:26,168 | INFO     | [data] copytool_in thread has finished
[2025-06-04 05:47:41] 2025-06-04 03:47:26,307 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 05:47:41] 2025-06-04 03:47:26,322 | INFO     | [job] validate thread has finished
[2025-06-04 05:47:41] 2025-06-04 03:47:26,344 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 05:47:41] 2025-06-04 03:47:26,445 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 05:47:41] 2025-06-04 03:47:26,588 | INFO     | [job] control thread has finished
[2025-06-04 05:47:41] 2025-06-04 03:47:27,196 | INFO     | [data] copytool_out thread has finished
[2025-06-04 05:47:41] 2025-06-04 03:47:27,545 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 05:47:41] 2025-06-04 03:47:31,552 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 05:47:41] 2025-06-04 03:47:34,194 | INFO     | job.realtimelogging is not enabled
[2025-06-04 05:47:41] 2025-06-04 03:47:35,200 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 05:47:41] 2025-06-04 03:47:36,461 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139734855370560)>', '<ExcThread(monitor, started 139734001116928)>']
[2025-06-04 05:47:41] 2025-06-04 03:47:37,178 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 05:47:41] 2025-06-04 03:47:37,179 | INFO     | [monitor] control thread has ended
[2025-06-04 05:47:41] 2025-06-04 03:47:41,467 | INFO     | all workflow threads have been joined
[2025-06-04 05:47:41] 2025-06-04 03:47:41,467 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 05:47:41] 2025-06-04 03:47:41,468 | INFO     | traces error code: 0
[2025-06-04 05:47:41] 2025-06-04 03:47:41,468 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 05:47:41] 2025-06-04 03:47:41,511 [wrapper] ==== pilot stdout END ====
[2025-06-04 05:47:41] 2025-06-04 03:47:41,514 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 05:47:41] 2025-06-04 03:47:41,517 [wrapper] pilotpid: 1341511
[2025-06-04 05:47:41] 2025-06-04 03:47:41,519 [wrapper] Pilot exit status: 0
[2025-06-04 05:47:41] 2025-06-04 03:47:41,527 [wrapper] pandaids: 6677637413
[2025-06-04 05:47:41] 2025-06-04 03:47:41,541 [wrapper] cleanup supervisor_pilot 1361890 1341512
[2025-06-04 05:47:41] 2025-06-04 03:47:41,543 [wrapper] Test setup, not cleaning
[2025-06-04 05:47:41] 2025-06-04 03:47:41,545 [wrapper] apfmon messages muted
[2025-06-04 05:47:41] 2025-06-04 03:47:41,548 [wrapper] ==== wrapper stdout END ====
[2025-06-04 05:47:41] 2025-06-04 03:47:41,550 [wrapper] ==== wrapper stderr END ====
[2025-06-04 05:47:41]  *** Error codes and diagnostics ***
[2025-06-04 05:47:41]     "exeErrorCode": 0,
[2025-06-04 05:47:41]     "exeErrorDiag": "",
[2025-06-04 05:47:41]     "pilotErrorCode": 0,
[2025-06-04 05:47:41]     "pilotErrorDiag": "",
[2025-06-04 05:47:41]  *** Listing of results directory ***
[2025-06-04 05:47:41] total 391168
[2025-06-04 05:47:41] -rw-r--r-- 1 boinc boinc    495897 Jun  3 15:40 pilot3.tar.gz
[2025-06-04 05:47:41] -rw-r--r-- 1 boinc boinc      5111 Jun  3 15:51 queuedata.json
[2025-06-04 05:47:41] -rwx------ 1 boinc boinc     37140 Jun  3 15:51 runpilot2-wrapper.sh
[2025-06-04 05:47:41] -rw-r--r-- 1 boinc boinc       100 Jun  4 03:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 05:47:41] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 03:55 run_atlas
[2025-06-04 05:47:41] -rw-r--r-- 1 boinc boinc       105 Jun  4 03:55 job.xml
[2025-06-04 05:47:41] -rw-r--r-- 2 boinc boinc 214100975 Jun  4 03:55 EVNT.45006593._001396.pool.root.1
[2025-06-04 05:47:41] -rw-r--r-- 1 boinc boinc      6692 Jun  4 03:55 init_data.xml
[2025-06-04 05:47:41] drwxrwx--x 2 boinc boinc      4096 Jun  4 03:55 shared
[2025-06-04 05:47:41] -rw-r--r-- 2 boinc boinc    508882 Jun  4 03:55 input.tar.gz
[2025-06-04 05:47:41] -rw-r--r-- 2 boinc boinc     15093 Jun  4 03:55 start_atlas.sh
[2025-06-04 05:47:41] -rw-r--r-- 1 boinc boinc         0 Jun  4 03:55 boinc_lockfile
[2025-06-04 05:47:41] -rw-r--r-- 1 boinc boinc      2525 Jun  4 03:55 pandaJob.out
[2025-06-04 05:47:41] -rw------- 1 boinc boinc    986077 Jun  4 03:56 agis_schedconf.cvmfs.json
[2025-06-04 05:47:41] -rw------- 1 boinc boinc   1603667 Jun  4 03:56 agis_ddmendpoints.agis.ALL.json
[2025-06-04 05:47:41] drwx------ 4 boinc boinc      4096 Jun  4 03:56 pilot3
[2025-06-04 05:47:41] -rw------- 1 boinc boinc        95 Jun  4 05:46 pilot_heartbeat.json
[2025-06-04 05:47:41] -rw------- 1 boinc boinc 180910379 Jun  4 05:46 HITS.45006595._034708.pool.root.1
[2025-06-04 05:47:41] -rw-r--r-- 1 boinc boinc       529 Jun  4 05:47 boinc_task_state.xml
[2025-06-04 05:47:41] -rw------- 1 boinc boinc      1017 Jun  4 05:47 memory_monitor_summary.json
[2025-06-04 05:47:41] -rw------- 1 boinc boinc    221911 Jun  4 05:47 log.45006595._034708.job.log.tgz.1
[2025-06-04 05:47:41] -rw------- 1 boinc boinc      7662 Jun  4 05:47 heartbeat.json
[2025-06-04 05:47:41] -rw-r--r-- 1 boinc boinc        27 Jun  4 05:47 wrapper_checkpoint.txt
[2025-06-04 05:47:41] -rw-r--r-- 1 boinc boinc      8192 Jun  4 05:47 boinc_mmap_file
[2025-06-04 05:47:41] -rw------- 1 boinc boinc      4871 Jun  4 05:47 pilotlog.txt
[2025-06-04 05:47:41] -rw------- 1 boinc boinc    633265 Jun  4 05:47 log.45006595._034708.job.log.1
[2025-06-04 05:47:41] -rw------- 1 boinc boinc       357 Jun  4 05:47 output.list
[2025-06-04 05:47:41] -rw-r--r-- 1 boinc boinc       620 Jun  4 05:47 runtime_log
[2025-06-04 05:47:41] -rw------- 1 boinc boinc    870400 Jun  4 05:47 result.tar.gz
[2025-06-04 05:47:41] -rw-r--r-- 1 boinc boinc      8753 Jun  4 05:47 runtime_log.err
[2025-06-04 05:47:41] -rw------- 1 boinc boinc       663 Jun  4 05:47 4vjLDm7Dhg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmbpYKDmBSYYQo.diag
[2025-06-04 05:47:41] -rw-r--r-- 1 boinc boinc     21126 Jun  4 05:47 stderr.txt
[2025-06-04 05:47:41] HITS file was successfully produced:
[2025-06-04 05:47:41] -rw------- 1 boinc boinc 180910379 Jun  4 05:46 shared/HITS.pool.root.1
[2025-06-04 05:47:41]  *** Contents of shared directory: ***
[2025-06-04 05:47:41] total 387132
[2025-06-04 05:47:41] -rw-r--r-- 2 boinc boinc 214100975 Jun  4 03:55 ATLAS.root_0
[2025-06-04 05:47:41] -rw-r--r-- 2 boinc boinc    508882 Jun  4 03:55 input.tar.gz
[2025-06-04 05:47:41] -rw-r--r-- 2 boinc boinc     15093 Jun  4 03:55 start_atlas.sh
[2025-06-04 05:47:41] -rw------- 1 boinc boinc 180910379 Jun  4 05:46 HITS.pool.root.1
[2025-06-04 05:47:41] -rw------- 1 boinc boinc    870400 Jun  4 05:47 result.tar.gz
05:47:43 (1337891): run_atlas exited; CPU time 12903.805890
05:47:43 (1337891): called boinc_finish(0)

</stderr_txt>
]]>

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