Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:37:34 (4171359): wrapper (7.7.26015): starting
13:37:34 (4171359): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 13:37:34] Arguments: --nthreads 8
[2025-06-03 13:37:34] Threads: 8
[2025-06-03 13:37:34] Checking for CVMFS
[2025-06-03 13:37:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:37:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:37:34] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:37:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:37:34] 2.12.6.0 1303481 22156 300324 146750 3 71 27346129 32935937 5053 16776704 0 68971546 99.645 72004352 34284 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 13:37:34] CVMFS is ok
[2025-06-03 13:37:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 13:37:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 13:37:34] Further information can be found at the LHC@home message board.
[2025-06-03 13:37:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:37:34] Checking for apptainer binary...
[2025-06-03 13:37:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:37:34] Running /usr/bin/apptainer --version
[2025-06-03 13:37:34] apptainer version 1.4.1-1.el9
[2025-06-03 13:37:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:37:34] c6-6-39-4.aglt2.org
[2025-06-03 13:37:34] apptainer works
[2025-06-03 13:37:34] Set ATHENA_PROC_NUMBER=8
[2025-06-03 13:37:34] Set ATHENA_CORE_NUMBER=8
[2025-06-03 13:37:34] Starting ATLAS job with PandaID=6677676354
[2025-06-03 13:37:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 14:41:13]  *** The last 200 lines of the pilot log: ***
[2025-06-03 14:41:13]  lfn=log.45006595._036478.job.log.tgz.1
[2025-06-03 14:41:13]  mtime=0
[2025-06-03 14:41:13]  protocol_id=None
[2025-06-03 14:41:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 14:41:13]  replicas=None
[2025-06-03 14:41:13]  scope=mc23_13p6TeV
[2025-06-03 14:41:13]  status=None
[2025-06-03 14:41:13]  status_code=0
[2025-06-03 14:41:13]  storage_token=
[2025-06-03 14:41:13]  surl=/tmp/boinchome/slots/6/PanDA_Pilot-6677676354/log.45006595._036478.job.log.tgz.1
[2025-06-03 14:41:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b4/99/log.45006595._036478.job.log.tgz.1
[2025-06-03 14:41:13]  workdir=None
[2025-06-03 14:41:13] ]
[2025-06-03 14:41:13] 2025-06-03 18:40:47,252 | INFO     | transferring file log.45006595._036478.job.log.tgz.1 from /tmp/boinchome/slots/6/PanDA_Pilot-6677676354/log.45006595._036478.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 14:41:13] 2025-06-03 18:40:47,253 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/6/PanDA_Pilot-6677676354/log.45006595._036478.job.log.tgz.1 /tmp/boinchome/slots/6/log.45006595._036478.job
[2025-06-03 14:41:13] 2025-06-03 18:40:47,270 | INFO     | adding to output.list: log.45006595._036478.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b4/99/log.45006595._036478.job.log.tg
[2025-06-03 14:41:13] 2025-06-03 18:40:47,271 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 14:41:13] 2025-06-03 18:40:47,271 | INFO     | summary of transferred files:
[2025-06-03 14:41:13] 2025-06-03 18:40:47,272 | INFO     |  -- lfn=log.45006595._036478.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 14:41:13] 2025-06-03 18:40:47,272 | INFO     | stage-out finished correctly
[2025-06-03 14:41:13] 2025-06-03 18:40:47,294 | INFO     | 3785s have passed since pilot start - server update state is 'RUNNING'
[2025-06-03 14:41:13] 2025-06-03 18:40:47,479 | WARNING  | process 4181393 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 14:41:13] 2025-06-03 18:40:47,479 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6677676354/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 14:41:13] 2025-06-03 18:40:47,705 | INFO     | number of running child processes to parent process 4181393: 1
[2025-06-03 14:41:13] 2025-06-03 18:40:47,705 | INFO     | maximum number of monitored processes: 6
[2025-06-03 14:41:13] 2025-06-03 18:40:48,633 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 14:41:13] 2025-06-03 18:40:50,213 | INFO     | monitor loop #284: job 0:6677676354 is in state 'finished'
[2025-06-03 14:41:13] 2025-06-03 18:40:50,213 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 14:41:13] 2025-06-03 18:40:51,509 | INFO     | job 6677676354 has state=finished
[2025-06-03 14:41:13] 2025-06-03 18:40:51,510 | INFO     | preparing for final server update for job 6677676354 in state='finished'
[2025-06-03 14:41:13] 2025-06-03 18:40:51,510 | INFO     | this job has now completed (state=finished)
[2025-06-03 14:41:13] 2025-06-03 18:40:51,510 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 14:41:13] 2025-06-03 18:40:51,510 | INFO     | log transfer has been attempted: DONE
[2025-06-03 14:41:13] 2025-06-03 18:40:51,511 | INFO     | job 6677676354 has finished - writing final server update
[2025-06-03 14:41:13] 2025-06-03 18:40:51,511 | INFO     | total number of processed events: 400 (read)
[2025-06-03 14:41:13] 2025-06-03 18:40:51,526 | INFO     | executing command: lscpu
[2025-06-03 14:41:13] 2025-06-03 18:40:51,584 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 14:41:13] 2025-06-03 18:40:52,716 | INFO     | monitor loop #285: job 0:6677676354 is in state 'finished'
[2025-06-03 14:41:13] 2025-06-03 18:40:52,716 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 14:41:13] 2025-06-03 18:40:54,889 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 14:41:13] 2025-06-03 18:40:54,889 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6677676354/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 14:41:13] 2025-06-03 18:40:54,890 | INFO     | extracted standard info from prmon json
[2025-06-03 14:41:13] 2025-06-03 18:40:54,890 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 14:41:13] 2025-06-03 18:40:54,890 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 14:41:13] 2025-06-03 18:40:54,890 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 14:41:13] 2025-06-03 18:40:54,891 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 14:41:13] 2025-06-03 18:40:54,892 | INFO     | fitting pss+swap vs Time
[2025-06-03 14:41:13] 2025-06-03 18:40:54,893 | INFO     | sum of square deviations: 51573060.0
[2025-06-03 14:41:13] 2025-06-03 18:40:54,893 | INFO     | sum of deviations: 2951215746.0000005
[2025-06-03 14:41:13] 2025-06-03 18:40:54,893 | INFO     | mean x: 1748974241.0
[2025-06-03 14:41:13] 2025-06-03 18:40:54,893 | INFO     | mean y: 2142797.8
[2025-06-03 14:41:13] 2025-06-03 18:40:54,893 | INFO     | -- intersect: -100081123919.1177
[2025-06-03 14:41:13] 2025-06-03 18:40:54,893 | INFO     | intersect: -100081123919.1177
[2025-06-03 14:41:13] 2025-06-03 18:40:54,893 | INFO     | chi2: 0.6408357139829599
[2025-06-03 14:41:13] 2025-06-03 18:40:54,893 | INFO     | -- intersect: -100081123919.1177
[2025-06-03 14:41:13] 2025-06-03 18:40:54,894 | INFO     | current memory leak: 57.22 B/s (using 55 data points, chi2=0.64)
[2025-06-03 14:41:13] 2025-06-03 18:40:54,894 | INFO     | ..............................
[2025-06-03 14:41:13] 2025-06-03 18:40:54,894 | INFO     | . Timing measurements:
[2025-06-03 14:41:13] 2025-06-03 18:40:54,894 | INFO     | . get job = 0 s
[2025-06-03 14:41:13] 2025-06-03 18:40:54,894 | INFO     | . initial setup = 2 s
[2025-06-03 14:41:13] 2025-06-03 18:40:54,894 | INFO     | . payload setup = 5 s
[2025-06-03 14:41:13] 2025-06-03 18:40:54,894 | INFO     | . stage-in = 0 s
[2025-06-03 14:41:13] 2025-06-03 18:40:54,894 | INFO     | . payload execution = 3757 s
[2025-06-03 14:41:13] 2025-06-03 18:40:54,894 | INFO     | . stage-out = 0 s
[2025-06-03 14:41:13] 2025-06-03 18:40:54,895 | INFO     | . log creation = 0 s
[2025-06-03 14:41:13] 2025-06-03 18:40:54,895 | INFO     | ..............................
[2025-06-03 14:41:13] 2025-06-03 18:40:55,002 | INFO     | 
[2025-06-03 14:41:13] 2025-06-03 18:40:55,002 | INFO     | job summary report
[2025-06-03 14:41:13] 2025-06-03 18:40:55,003 | INFO     | --------------------------------------------------
[2025-06-03 14:41:13] 2025-06-03 18:40:55,003 | INFO     | PanDA job id: 6677676354
[2025-06-03 14:41:13] 2025-06-03 18:40:55,003 | INFO     | task id: 45006595
[2025-06-03 14:41:13] 2025-06-03 18:40:55,003 | INFO     | errors: (none)
[2025-06-03 14:41:13] 2025-06-03 18:40:55,003 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 14:41:13] 2025-06-03 18:40:55,003 | INFO     | pilot state: finished 
[2025-06-03 14:41:13] 2025-06-03 18:40:55,003 | INFO     | transexitcode: 0
[2025-06-03 14:41:13] 2025-06-03 18:40:55,003 | INFO     | exeerrorcode: 0
[2025-06-03 14:41:13] 2025-06-03 18:40:55,004 | INFO     | exeerrordiag: 
[2025-06-03 14:41:13] 2025-06-03 18:40:55,004 | INFO     | exitcode: 0
[2025-06-03 14:41:13] 2025-06-03 18:40:55,004 | INFO     | exitmsg: OK
[2025-06-03 14:41:13] 2025-06-03 18:40:55,004 | INFO     | cpuconsumptiontime: 24156 s
[2025-06-03 14:41:13] 2025-06-03 18:40:55,004 | INFO     | nevents: 400
[2025-06-03 14:41:13] 2025-06-03 18:40:55,004 | INFO     | neventsw: 0
[2025-06-03 14:41:13] 2025-06-03 18:40:55,004 | INFO     | pid: 4181393
[2025-06-03 14:41:13] 2025-06-03 18:40:55,004 | INFO     | pgrp: 4181393
[2025-06-03 14:41:13] 2025-06-03 18:40:55,004 | INFO     | corecount: 8
[2025-06-03 14:41:13] 2025-06-03 18:40:55,004 | INFO     | event service: False
[2025-06-03 14:41:13] 2025-06-03 18:40:55,004 | INFO     | sizes: {0: 2404354, 1: 2405210, 5: 2405416, 12: 2405472, 3766: 2431182, 3767: 2431181, 3768: 2440306, 3770: 2440362, 3776: 2440532}
[2025-06-03 14:41:13] 2025-06-03 18:40:55,004 | INFO     | --------------------------------------------------
[2025-06-03 14:41:13] 2025-06-03 18:40:55,004 | INFO     | 
[2025-06-03 14:41:13] 2025-06-03 18:40:55,004 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-06-03 14:41:13] 2025-06-03 18:40:55,021 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 14:41:13] 2025-06-03 18:40:55,021 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 14:41:13] 2025-06-03 18:40:55,021 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 14:41:13] 2025-06-03 18:40:55,021 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 14:41:13] 2025-06-03 18:40:55,021 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 14:41:13] 2025-06-03 18:40:55,022 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 14:41:13] 2025-06-03 18:40:55,022 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 14:41:13] 2025-06-03 18:40:55,022 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 14:41:13] 2025-06-03 18:40:55,022 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 14:41:13] 2025-06-03 18:40:55,022 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 14:41:13] 2025-06-03 18:40:55,022 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 14:41:13] 2025-06-03 18:40:55,022 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 14:41:13] 2025-06-03 18:40:55,022 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 14:41:13] 2025-06-03 18:40:55,022 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 14:41:13] 2025-06-03 18:40:55,022 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 14:41:13] 2025-06-03 18:40:55,022 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 14:41:13] 2025-06-03 18:40:55,022 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 14:41:13] 2025-06-03 18:40:55,022 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 14:41:13] 2025-06-03 18:40:55,022 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 14:41:13] 2025-06-03 18:40:55,023 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 14:41:13] 2025-06-03 18:40:55,023 | INFO     | job 6677676354 has completed (purged errors)
[2025-06-03 14:41:13] 2025-06-03 18:40:55,023 | INFO     | overall cleanup function is called
[2025-06-03 14:41:13] 2025-06-03 18:40:56,030 | INFO     | --- collectZombieJob: --- 10, [4181393]
[2025-06-03 14:41:13] 2025-06-03 18:40:56,030 | INFO     | zombie collector waiting for pid 4181393
[2025-06-03 14:41:13] 2025-06-03 18:40:56,030 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 14:41:13] 2025-06-03 18:40:56,030 | INFO     | collected zombie processes
[2025-06-03 14:41:13] 2025-06-03 18:40:56,030 | INFO     | will attempt to kill all subprocesses of pid=4181393
[2025-06-03 14:41:13] 2025-06-03 18:40:56,177 | INFO     | process IDs to be killed: [4181393] (in reverse order)
[2025-06-03 14:41:13] 2025-06-03 18:40:56,230 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 14:41:13] 2025-06-03 18:40:56,230 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 14:41:13] 2025-06-03 18:40:56,236 | INFO     | did not find any defunct processes belonging to 4181393
[2025-06-03 14:41:13] 2025-06-03 18:40:56,242 | INFO     | did not find any defunct processes belonging to 4181393
[2025-06-03 14:41:13] 2025-06-03 18:40:56,242 | INFO     | ready for new job
[2025-06-03 14:41:13] 2025-06-03 18:40:56,242 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 14:41:13] 2025-06-03 18:40:56,244 | INFO     | **************************************
[2025-06-03 14:41:13] 2025-06-03 18:40:56,244 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 14:41:13] 2025-06-03 18:40:56,244 | INFO     | **************************************
[2025-06-03 14:41:13] 2025-06-03 18:40:56,244 | INFO     | 
[2025-06-03 14:41:13] 2025-06-03 18:40:56,259 | INFO     | architecture information:
[2025-06-03 14:41:13] 2025-06-03 18:40:56,259 | INFO     | executing command: cat /etc/os-release
[2025-06-03 14:41:13] 2025-06-03 18:40:56,272 | INFO     | cat /etc/os-release:
[2025-06-03 14:41:13] NAME="CentOS Linux"
[2025-06-03 14:41:13] VERSION="7 (Core)"
[2025-06-03 14:41:13] ID="centos"
[2025-06-03 14:41:13] ID_LIKE="rhel fedora"
[2025-06-03 14:41:13] VERSION_ID="7"
[2025-06-03 14:41:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 14:41:13] ANSI_COLOR="0;31"
[2025-06-03 14:41:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 14:41:13] HOME_URL="https://www.centos.org/"
[2025-06-03 14:41:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 14:41:13] 
[2025-06-03 14:41:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 14:41:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 14:41:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 14:41:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 14:41:13] 
[2025-06-03 14:41:13] 2025-06-03 18:40:56,272 | INFO     | **************************************
[2025-06-03 14:41:13] 2025-06-03 18:40:56,775 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-06-03 14:41:13] 2025-06-03 18:40:56,791 | INFO     | sufficient remaining disk space (73525100544 B)
[2025-06-03 14:41:13] 2025-06-03 18:40:56,791 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 14:41:13] 2025-06-03 18:40:56,792 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 14:41:13] 2025-06-03 18:40:56,792 | INFO     | update_server=False
[2025-06-03 14:41:13] 2025-06-03 18:40:56,792 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 14:41:13] 2025-06-03 18:40:56,792 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:41:13] 2025-06-03 18:40:56,792 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 14:41:13] 2025-06-03 18:40:56,793 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:41:13] 2025-06-03 18:40:56,793 | INFO     | aborting loop
[2025-06-03 14:41:13] 2025-06-03 18:40:56,793 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 14:41:13] 2025-06-03 18:40:56,793 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 14:41:13] 2025-06-03 18:40:56,794 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 14:41:13] 2025-06-03 18:40:57,797 | INFO     | [job] retrieve thread has finished
[2025-06-03 14:41:13] 2025-06-03 18:40:57,798 | INFO     | [job] job monitor thread has finished
[2025-06-03 14:41:13] 2025-06-03 18:40:57,799 | INFO     | [job] queue monitor thread has finished
[2025-06-03 14:41:13] 2025-06-03 18:40:57,855 | INFO     | [job] validate thread has finished
[2025-06-03 14:41:13] 2025-06-03 18:40:57,885 | INFO     | all payload control threads have been joined
[2025-06-03 14:41:13] 2025-06-03 18:40:57,885 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 14:41:13] 2025-06-03 18:40:57,892 | INFO     | all data control threads have been joined
[2025-06-03 14:41:13] 2025-06-03 18:40:57,908 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 14:41:13] 2025-06-03 18:40:58,009 | INFO     | [payload] validate_post thread has finished
[2025-06-03 14:41:13] 2025-06-03 18:40:58,252 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 14:41:13] 2025-06-03 18:40:58,300 | INFO     | all job control threads have been joined
[2025-06-03 14:41:13] 2025-06-03 18:40:58,356 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 14:41:13] 2025-06-03 18:40:58,847 | INFO     | [data] copytool_in thread has finished
[2025-06-03 14:41:13] 2025-06-03 18:40:58,887 | INFO     | [payload] control thread has finished
[2025-06-03 14:41:13] 2025-06-03 18:40:58,897 | INFO     | [data] control thread has finished
[2025-06-03 14:41:13] 2025-06-03 18:40:59,169 | INFO     | [payload] failed_post thread has finished
[2025-06-03 14:41:13] 2025-06-03 18:40:59,227 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 14:41:13] 2025-06-03 18:40:59,305 | INFO     | [job] control thread has finished
[2025-06-03 14:41:13] 2025-06-03 18:40:59,891 | INFO     | [data] copytool_out thread has finished
[2025-06-03 14:41:13] 2025-06-03 18:41:03,233 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 14:41:13] 2025-06-03 18:41:06,891 | INFO     | job.realtimelogging is not enabled
[2025-06-03 14:41:13] 2025-06-03 18:41:07,896 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 14:41:13] 2025-06-03 18:41:08,667 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140492235331392)>', '<ExcThread(monitor, started 140491458864896)>']
[2025-06-03 14:41:13] 2025-06-03 18:41:08,851 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 14:41:13] 2025-06-03 18:41:08,852 | INFO     | [monitor] control thread has ended
[2025-06-03 14:41:13] 2025-06-03 18:41:13,693 | INFO     | all workflow threads have been joined
[2025-06-03 14:41:13] 2025-06-03 18:41:13,693 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 14:41:13] 2025-06-03 18:41:13,693 | INFO     | traces error code: 0
[2025-06-03 14:41:13] 2025-06-03 18:41:13,694 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 14:41:13] 2025-06-03 18:41:13,844 [wrapper] ==== pilot stdout END ====
[2025-06-03 14:41:13] 2025-06-03 18:41:13,846 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 14:41:13] 2025-06-03 18:41:13,849 [wrapper] pilotpid: 4174972
[2025-06-03 14:41:13] 2025-06-03 18:41:13,851 [wrapper] Pilot exit status: 0
[2025-06-03 14:41:13] 2025-06-03 18:41:13,860 [wrapper] pandaids: 6677676354
[2025-06-03 14:41:13] 2025-06-03 18:41:13,908 [wrapper] cleanup supervisor_pilot  182121 4174973
[2025-06-03 14:41:13] 2025-06-03 18:41:13,910 [wrapper] Test setup, not cleaning
[2025-06-03 14:41:13] 2025-06-03 18:41:13,913 [wrapper] apfmon messages muted
[2025-06-03 14:41:13] 2025-06-03 18:41:13,915 [wrapper] ==== wrapper stdout END ====
[2025-06-03 14:41:13] 2025-06-03 18:41:13,917 [wrapper] ==== wrapper stderr END ====
[2025-06-03 14:41:13]  *** Error codes and diagnostics ***
[2025-06-03 14:41:13]     "exeErrorCode": 0,
[2025-06-03 14:41:13]     "exeErrorDiag": "",
[2025-06-03 14:41:13]     "pilotErrorCode": 0,
[2025-06-03 14:41:13]     "pilotErrorDiag": "",
[2025-06-03 14:41:13]  *** Listing of results directory ***
[2025-06-03 14:41:13] total 386748
[2025-06-03 14:41:13] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 10:52 pilot3.tar.gz
[2025-06-03 14:41:13] -rwx------. 1 boincer umatlas     37140 Jun  3 11:02 runpilot2-wrapper.sh
[2025-06-03 14:41:13] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 11:02 queuedata.json
[2025-06-03 14:41:13] -rw-r--r--. 1 boincer umatlas       100 Jun  3 13:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 14:41:13] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 13:37 run_atlas
[2025-06-03 14:41:13] -rw-r--r--. 1 boincer umatlas       105 Jun  3 13:37 job.xml
[2025-06-03 14:41:13] -rw-r--r--. 2 boincer umatlas 214458636 Jun  3 13:37 EVNT.45006593._001466.pool.root.1
[2025-06-03 14:41:13] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:37 start_atlas.sh
[2025-06-03 14:41:13] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 13:37 shared
[2025-06-03 14:41:13] -rw-r--r--. 2 boincer umatlas    508874 Jun  3 13:37 input.tar.gz
[2025-06-03 14:41:13] -rw-r--r--. 1 boincer umatlas         0 Jun  3 13:37 boinc_lockfile
[2025-06-03 14:41:13] -rw-r--r--. 1 boincer umatlas      2524 Jun  3 13:37 pandaJob.out
[2025-06-03 14:41:13] -rw-------. 1 boincer umatlas    985078 Jun  3 13:37 agis_schedconf.cvmfs.json
[2025-06-03 14:41:13] -rw-------. 1 boincer umatlas   1603667 Jun  3 13:37 agis_ddmendpoints.agis.ALL.json
[2025-06-03 14:41:13] drwx------. 4 boincer umatlas      4096 Jun  3 13:37 pilot3
[2025-06-03 14:41:13] -rw-r--r--. 1 boincer umatlas      6842 Jun  3 14:36 init_data.xml
[2025-06-03 14:41:13] -rw-------. 1 boincer umatlas 176401491 Jun  3 14:40 HITS.45006595._036478.pool.root.1
[2025-06-03 14:41:13] -rw-r--r--. 1 boincer umatlas       530 Jun  3 14:40 boinc_task_state.xml
[2025-06-03 14:41:13] -rw-------. 1 boincer umatlas      1032 Jun  3 14:40 memory_monitor_summary.json
[2025-06-03 14:41:13] -rw-------. 1 boincer umatlas        95 Jun  3 14:40 pilot_heartbeat.json
[2025-06-03 14:41:13] -rw-------. 1 boincer umatlas    280995 Jun  3 14:40 log.45006595._036478.job.log.tgz.1
[2025-06-03 14:41:13] -rw-------. 1 boincer umatlas      7710 Jun  3 14:40 heartbeat.json
[2025-06-03 14:41:13] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 14:41 boinc_mmap_file
[2025-06-03 14:41:13] -rw-r--r--. 1 boincer umatlas        27 Jun  3 14:41 wrapper_checkpoint.txt
[2025-06-03 14:41:13] -rw-------. 1 boincer umatlas      4548 Jun  3 14:41 pilotlog.txt
[2025-06-03 14:41:13] -rw-------. 1 boincer umatlas    385712 Jun  3 14:41 log.45006595._036478.job.log.1
[2025-06-03 14:41:13] -rw-------. 1 boincer umatlas       357 Jun  3 14:41 output.list
[2025-06-03 14:41:13] -rw-r--r--. 1 boincer umatlas       620 Jun  3 14:41 runtime_log
[2025-06-03 14:41:13] -rw-------. 1 boincer umatlas    686080 Jun  3 14:41 result.tar.gz
[2025-06-03 14:41:13] -rw-r--r--. 1 boincer umatlas      8664 Jun  3 14:41 runtime_log.err
[2025-06-03 14:41:13] -rw-------. 1 boincer umatlas       651 Jun  3 14:41 iDpMDmOLig7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgjkKDmZKMTVn.diag
[2025-06-03 14:41:13] -rw-r--r--. 1 boincer umatlas     21623 Jun  3 14:41 stderr.txt
[2025-06-03 14:41:13] HITS file was successfully produced:
[2025-06-03 14:41:13] -rw-------. 1 boincer umatlas 176401491 Jun  3 14:40 shared/HITS.pool.root.1
[2025-06-03 14:41:13]  *** Contents of shared directory: ***
[2025-06-03 14:41:13] total 382896
[2025-06-03 14:41:13] -rw-r--r--. 2 boincer umatlas 214458636 Jun  3 13:37 ATLAS.root_0
[2025-06-03 14:41:13] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:37 start_atlas.sh
[2025-06-03 14:41:13] -rw-r--r--. 2 boincer umatlas    508874 Jun  3 13:37 input.tar.gz
[2025-06-03 14:41:13] -rw-------. 1 boincer umatlas 176401491 Jun  3 14:40 HITS.pool.root.1
[2025-06-03 14:41:13] -rw-------. 1 boincer umatlas    686080 Jun  3 14:41 result.tar.gz
14:41:15 (4171359): run_atlas exited; CPU time 24226.671313
14:41:15 (4171359): called boinc_finish(0)

</stderr_txt>
]]>

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