Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:37:32 (36773): wrapper (7.7.26015): starting
13:37:32 (36773): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 13:37:32] Arguments: --nthreads 8
[2025-06-03 13:37:32] Threads: 8
[2025-06-03 13:37:32] Checking for CVMFS
[2025-06-03 13:37:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:37:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:37:32] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:37:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:37:32] 2.11.2.0 1570 107712 233804 146750 2 187 18151778 18432001 3577 130560 0 475249590 99.061 990483324 35399 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 13:37:32] CVMFS is ok
[2025-06-03 13:37:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 13:37:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 13:37:32] Further information can be found at the LHC@home message board.
[2025-06-03 13:37:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:37:32] Checking for apptainer binary...
[2025-06-03 13:37:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:37:32] Running /usr/bin/apptainer --version
[2025-06-03 13:37:32] apptainer version 1.3.2-1.el7
[2025-06-03 13:37:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:37:33] c-210-9.aglt2.org
[2025-06-03 13:37:33] apptainer works
[2025-06-03 13:37:33] Set ATHENA_PROC_NUMBER=8
[2025-06-03 13:37:33] Set ATHENA_CORE_NUMBER=8
[2025-06-03 13:37:33] Starting ATLAS job with PandaID=6677637464
[2025-06-03 13:37:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 18:08:15]  *** The last 200 lines of the pilot log: ***
[2025-06-03 18:08:15] 2025-06-03 22:08:01,673 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 18:08:15] 2025-06-03 22:08:01,674 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6677637464/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 18:08:15] 2025-06-03 22:08:01,675 | INFO     | extracted standard info from prmon json
[2025-06-03 18:08:15] 2025-06-03 22:08:01,675 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 18:08:15] 2025-06-03 22:08:01,675 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 18:08:15] 2025-06-03 22:08:01,675 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 18:08:15] 2025-06-03 22:08:01,675 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 18:08:15] 2025-06-03 22:08:01,681 | INFO     | fitting pss+swap vs Time
[2025-06-03 18:08:15] 2025-06-03 22:08:01,682 | INFO     | sum of square deviations: 5836205399.281947
[2025-06-03 18:08:15] 2025-06-03 22:08:01,684 | INFO     | sum of deviations: 8655680629.80074
[2025-06-03 18:08:15] 2025-06-03 22:08:01,684 | INFO     | mean x: 1748980368.8533835
[2025-06-03 18:08:15] 2025-06-03 22:08:01,685 | INFO     | mean y: 2462089.9436090225
[2025-06-03 18:08:15] 2025-06-03 22:08:01,685 | INFO     | -- intersect: -2591452014.3215613
[2025-06-03 18:08:15] 2025-06-03 22:08:01,685 | INFO     | intersect: -2591452014.3215613
[2025-06-03 18:08:15] 2025-06-03 22:08:01,685 | INFO     | chi2: 1.9513345829710218
[2025-06-03 18:08:15] 2025-06-03 22:08:01,686 | INFO     | sum of square deviations: 5513230863.271997
[2025-06-03 18:08:15] 2025-06-03 22:08:01,688 | INFO     | sum of deviations: 25723096025.996193
[2025-06-03 18:08:15] 2025-06-03 22:08:01,688 | INFO     | mean x: 1748980216.348659
[2025-06-03 18:08:15] 2025-06-03 22:08:01,688 | INFO     | mean y: 2470024.417624521
[2025-06-03 18:08:15] 2025-06-03 22:08:01,688 | INFO     | -- intersect: -8157751662.000914
[2025-06-03 18:08:15] 2025-06-03 22:08:01,689 | INFO     | intersect: -8157751662.000914
[2025-06-03 18:08:15] 2025-06-03 22:08:01,689 | INFO     | chi2: 1.1776667115607096
[2025-06-03 18:08:15] 2025-06-03 22:08:01,689 | INFO     | current chi2=1.1776667115607096 (change=39.64814020937185 %)
[2025-06-03 18:08:15] 2025-06-03 22:08:01,690 | INFO     | sum of square deviations: 5202427810.359375
[2025-06-03 18:08:15] 2025-06-03 22:08:01,692 | INFO     | sum of deviations: 25187286823.703125
[2025-06-03 18:08:15] 2025-06-03 22:08:01,692 | INFO     | mean x: 1748980063.8515625
[2025-06-03 18:08:15] 2025-06-03 22:08:01,692 | INFO     | mean y: 2469761.4921875
[2025-06-03 18:08:15] 2025-06-03 22:08:01,692 | INFO     | -- intersect: -8465127314.905278
[2025-06-03 18:08:15] 2025-06-03 22:08:01,692 | INFO     | intersect: -8465127314.905278
[2025-06-03 18:08:15] 2025-06-03 22:08:01,693 | INFO     | chi2: 1.1780527112369104
[2025-06-03 18:08:15] 2025-06-03 22:08:01,693 | INFO     | current chi2=1.1780527112369104 (change=-0.03277664830053993 %)
[2025-06-03 18:08:15] 2025-06-03 22:08:01,693 | INFO     | right removable region: 255
[2025-06-03 18:08:15] 2025-06-03 22:08:01,693 | INFO     | sum of square deviations: 5513221836.145571
[2025-06-03 18:08:15] 2025-06-03 22:08:01,695 | INFO     | sum of deviations: -25037480246.670498
[2025-06-03 18:08:15] 2025-06-03 22:08:01,696 | INFO     | mean x: 1748980521.3601532
[2025-06-03 18:08:15] 2025-06-03 22:08:01,696 | INFO     | mean y: 2477861.7624521074
[2025-06-03 18:08:15] 2025-06-03 22:08:01,696 | INFO     | -- intersect: 7945213807.606602
[2025-06-03 18:08:15] 2025-06-03 22:08:01,696 | INFO     | intersect: 7945213807.606602
[2025-06-03 18:08:15] 2025-06-03 22:08:01,696 | INFO     | chi2: 0.8003647199283228
[2025-06-03 18:08:15] 2025-06-03 22:08:01,696 | INFO     | current chi2=0.8003647199283228 (change=58.983726988032956 %)
[2025-06-03 18:08:15] 2025-06-03 22:08:01,697 | INFO     | sum of square deviations: 5202378035.484375
[2025-06-03 18:08:15] 2025-06-03 22:08:01,699 | INFO     | sum of deviations: -23842747037.273438
[2025-06-03 18:08:15] 2025-06-03 22:08:01,699 | INFO     | mean x: 1748980673.8671875
[2025-06-03 18:08:15] 2025-06-03 22:08:01,699 | INFO     | mean y: 2477270.05078125
[2025-06-03 18:08:15] 2025-06-03 22:08:01,699 | INFO     | -- intersect: 8018139241.492425
[2025-06-03 18:08:15] 2025-06-03 22:08:01,699 | INFO     | intersect: 8018139241.492425
[2025-06-03 18:08:15] 2025-06-03 22:08:01,700 | INFO     | chi2: 0.7999176395907894
[2025-06-03 18:08:15] 2025-06-03 22:08:01,700 | INFO     | current chi2=0.7999176395907894 (change=0.05585957581606262 %)
[2025-06-03 18:08:15] 2025-06-03 22:08:01,700 | INFO     | left removable region: 20
[2025-06-03 18:08:15] 2025-06-03 22:08:01,700 | INFO     | sum of square deviations: 4024203291.293606
[2025-06-03 18:08:15] 2025-06-03 22:08:01,702 | INFO     | sum of deviations: -1580307478.1148942
[2025-06-03 18:08:15] 2025-06-03 22:08:01,702 | INFO     | mean x: 1748980643.3787234
[2025-06-03 18:08:15] 2025-06-03 22:08:01,702 | INFO     | mean y: 2482954.4170212764
[2025-06-03 18:08:15] 2025-06-03 22:08:01,703 | INFO     | -- intersect: 689308889.823757
[2025-06-03 18:08:15] 2025-06-03 22:08:01,703 | INFO     | intersect: 689308889.823757
[2025-06-03 18:08:15] 2025-06-03 22:08:01,703 | INFO     | chi2: 0.00663308714666301
[2025-06-03 18:08:15] 2025-06-03 22:08:01,703 | INFO     | -- intersect: 689308889.823757
[2025-06-03 18:08:15] 2025-06-03 22:08:01,703 | INFO     | current memory leak: -0.39 B/s (using 235 data points, chi2=0.01)
[2025-06-03 18:08:15] 2025-06-03 22:08:01,704 | INFO     | ..............................
[2025-06-03 18:08:15] 2025-06-03 22:08:01,704 | INFO     | . Timing measurements:
[2025-06-03 18:08:15] 2025-06-03 22:08:01,704 | INFO     | . get job = 0 s
[2025-06-03 18:08:15] 2025-06-03 22:08:01,705 | INFO     | . initial setup = 2 s
[2025-06-03 18:08:15] 2025-06-03 22:08:01,705 | INFO     | . payload setup = 5 s
[2025-06-03 18:08:15] 2025-06-03 22:08:01,705 | INFO     | . stage-in = 0 s
[2025-06-03 18:08:15] 2025-06-03 22:08:01,705 | INFO     | . payload execution = 16178 s
[2025-06-03 18:08:15] 2025-06-03 22:08:01,705 | INFO     | . stage-out = 2 s
[2025-06-03 18:08:15] 2025-06-03 22:08:01,705 | INFO     | . log creation = 0 s
[2025-06-03 18:08:15] 2025-06-03 22:08:01,705 | INFO     | ..............................
[2025-06-03 18:08:15] 2025-06-03 22:08:01,817 | INFO     | 
[2025-06-03 18:08:15] 2025-06-03 22:08:01,817 | INFO     | job summary report
[2025-06-03 18:08:15] 2025-06-03 22:08:01,817 | INFO     | --------------------------------------------------
[2025-06-03 18:08:15] 2025-06-03 22:08:01,817 | INFO     | PanDA job id: 6677637464
[2025-06-03 18:08:15] 2025-06-03 22:08:01,817 | INFO     | task id: 45006595
[2025-06-03 18:08:15] 2025-06-03 22:08:01,817 | INFO     | errors: (none)
[2025-06-03 18:08:15] 2025-06-03 22:08:01,817 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 18:08:15] 2025-06-03 22:08:01,818 | INFO     | pilot state: finished 
[2025-06-03 18:08:15] 2025-06-03 22:08:01,818 | INFO     | transexitcode: 0
[2025-06-03 18:08:15] 2025-06-03 22:08:01,818 | INFO     | exeerrorcode: 0
[2025-06-03 18:08:15] 2025-06-03 22:08:01,818 | INFO     | exeerrordiag: 
[2025-06-03 18:08:15] 2025-06-03 22:08:01,818 | INFO     | exitcode: 0
[2025-06-03 18:08:15] 2025-06-03 22:08:01,818 | INFO     | exitmsg: OK
[2025-06-03 18:08:15] 2025-06-03 22:08:01,818 | INFO     | cpuconsumptiontime: 45230 s
[2025-06-03 18:08:15] 2025-06-03 22:08:01,818 | INFO     | nevents: 400
[2025-06-03 18:08:15] 2025-06-03 22:08:01,818 | INFO     | neventsw: 0
[2025-06-03 18:08:15] 2025-06-03 22:08:01,818 | INFO     | pid: 7626
[2025-06-03 18:08:15] 2025-06-03 22:08:01,818 | INFO     | pgrp: 7626
[2025-06-03 18:08:15] 2025-06-03 22:08:01,818 | INFO     | corecount: 8
[2025-06-03 18:08:15] 2025-06-03 22:08:01,819 | INFO     | event service: False
[2025-06-03 18:08:15] 2025-06-03 22:08:01,819 | INFO     | sizes: {0: 2405013, 1: 2405212, 4: 2405418, 11: 2405446, 16187: 2436566, 16188: 2436565, 16192: 2445690, 16193: 2445746, 16205: 2445916}
[2025-06-03 18:08:15] 2025-06-03 22:08:01,819 | INFO     | --------------------------------------------------
[2025-06-03 18:08:15] 2025-06-03 22:08:01,819 | INFO     | 
[2025-06-03 18:08:15] 2025-06-03 22:08:01,819 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-03 18:08:15] 2025-06-03 22:08:01,866 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 18:08:15] 2025-06-03 22:08:01,866 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 18:08:15] 2025-06-03 22:08:01,866 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 18:08:15] 2025-06-03 22:08:01,867 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 18:08:15] 2025-06-03 22:08:01,867 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 18:08:15] 2025-06-03 22:08:01,867 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 18:08:15] 2025-06-03 22:08:01,867 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 18:08:15] 2025-06-03 22:08:01,867 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 18:08:15] 2025-06-03 22:08:01,867 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 18:08:15] 2025-06-03 22:08:01,867 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 18:08:15] 2025-06-03 22:08:01,867 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 18:08:15] 2025-06-03 22:08:01,867 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 18:08:15] 2025-06-03 22:08:01,867 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 18:08:15] 2025-06-03 22:08:01,868 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 18:08:15] 2025-06-03 22:08:01,868 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 18:08:15] 2025-06-03 22:08:01,868 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 18:08:15] 2025-06-03 22:08:01,868 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 18:08:15] 2025-06-03 22:08:01,868 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 18:08:15] 2025-06-03 22:08:01,868 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 18:08:15] 2025-06-03 22:08:01,868 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 18:08:15] 2025-06-03 22:08:01,868 | INFO     | job 6677637464 has completed (purged errors)
[2025-06-03 18:08:15] 2025-06-03 22:08:01,868 | INFO     | overall cleanup function is called
[2025-06-03 18:08:15] 2025-06-03 22:08:02,877 | INFO     | --- collectZombieJob: --- 10, [7626]
[2025-06-03 18:08:15] 2025-06-03 22:08:02,877 | INFO     | zombie collector waiting for pid 7626
[2025-06-03 18:08:15] 2025-06-03 22:08:02,877 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 18:08:15] 2025-06-03 22:08:02,877 | INFO     | collected zombie processes
[2025-06-03 18:08:15] 2025-06-03 22:08:02,877 | INFO     | will attempt to kill all subprocesses of pid=7626
[2025-06-03 18:08:15] 2025-06-03 22:08:03,200 | INFO     | process IDs to be killed: [7626] (in reverse order)
[2025-06-03 18:08:15] 2025-06-03 22:08:03,398 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 18:08:15] 2025-06-03 22:08:03,398 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 18:08:15] 2025-06-03 22:08:03,405 | INFO     | did not find any defunct processes belonging to 7626
[2025-06-03 18:08:15] 2025-06-03 22:08:03,411 | INFO     | did not find any defunct processes belonging to 7626
[2025-06-03 18:08:15] 2025-06-03 22:08:03,412 | INFO     | ready for new job
[2025-06-03 18:08:15] 2025-06-03 22:08:03,412 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 18:08:15] 2025-06-03 22:08:03,413 | INFO     | **************************************
[2025-06-03 18:08:15] 2025-06-03 22:08:03,413 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 18:08:15] 2025-06-03 22:08:03,413 | INFO     | **************************************
[2025-06-03 18:08:15] 2025-06-03 22:08:03,413 | INFO     | 
[2025-06-03 18:08:15] 2025-06-03 22:08:03,415 | INFO     | architecture information:
[2025-06-03 18:08:15] 2025-06-03 22:08:03,415 | INFO     | executing command: cat /etc/os-release
[2025-06-03 18:08:15] 2025-06-03 22:08:03,429 | INFO     | cat /etc/os-release:
[2025-06-03 18:08:15] NAME="CentOS Linux"
[2025-06-03 18:08:15] VERSION="7 (Core)"
[2025-06-03 18:08:15] ID="centos"
[2025-06-03 18:08:15] ID_LIKE="rhel fedora"
[2025-06-03 18:08:15] VERSION_ID="7"
[2025-06-03 18:08:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 18:08:15] ANSI_COLOR="0;31"
[2025-06-03 18:08:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 18:08:15] HOME_URL="https://www.centos.org/"
[2025-06-03 18:08:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 18:08:15] 
[2025-06-03 18:08:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 18:08:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 18:08:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 18:08:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 18:08:15] 
[2025-06-03 18:08:15] 2025-06-03 22:08:03,430 | INFO     | **************************************
[2025-06-03 18:08:15] 2025-06-03 22:08:03,933 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-03 18:08:15] 2025-06-03 22:08:04,199 | INFO     | sufficient remaining disk space (55603888128 B)
[2025-06-03 18:08:15] 2025-06-03 22:08:04,199 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 18:08:15] 2025-06-03 22:08:04,199 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 18:08:15] 2025-06-03 22:08:04,200 | INFO     | update_server=False
[2025-06-03 18:08:15] 2025-06-03 22:08:04,200 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 18:08:15] 2025-06-03 22:08:04,209 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:08:15] 2025-06-03 22:08:04,209 | INFO     | aborting loop
[2025-06-03 18:08:15] 2025-06-03 22:08:04,209 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 18:08:15] 2025-06-03 22:08:04,426 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 18:08:15] 2025-06-03 22:08:04,426 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 18:08:15] 2025-06-03 22:08:04,426 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 18:08:15] 2025-06-03 22:08:04,561 | INFO     | all data control threads have been joined
[2025-06-03 18:08:15] 2025-06-03 22:08:04,759 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 18:08:15] 2025-06-03 22:08:04,860 | INFO     | all payload control threads have been joined
[2025-06-03 18:08:15] 2025-06-03 22:08:05,206 | INFO     | [job] retrieve thread has finished
[2025-06-03 18:08:15] 2025-06-03 22:08:05,217 | INFO     | [job] job monitor thread has finished
[2025-06-03 18:08:15] 2025-06-03 22:08:05,338 | INFO     | [job] validate thread has finished
[2025-06-03 18:08:15] 2025-06-03 22:08:05,564 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 18:08:15] 2025-06-03 22:08:05,567 | INFO     | [data] control thread has finished
[2025-06-03 18:08:15] 2025-06-03 22:08:05,567 | INFO     | all job control threads have been joined
[2025-06-03 18:08:15] 2025-06-03 22:08:05,866 | INFO     | [payload] control thread has finished
[2025-06-03 18:08:15] 2025-06-03 22:08:05,884 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 18:08:15] 2025-06-03 22:08:05,964 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 18:08:15] 2025-06-03 22:08:06,131 | INFO     | [payload] validate_post thread has finished
[2025-06-03 18:08:15] 2025-06-03 22:08:06,218 | INFO     | [data] copytool_out thread has finished
[2025-06-03 18:08:15] 2025-06-03 22:08:06,283 | INFO     | [payload] failed_post thread has finished
[2025-06-03 18:08:15] 2025-06-03 22:08:06,283 | INFO     | [data] copytool_in thread has finished
[2025-06-03 18:08:15] 2025-06-03 22:08:06,423 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 18:08:15] 2025-06-03 22:08:06,575 | INFO     | [job] control thread has finished
[2025-06-03 18:08:15] 2025-06-03 22:08:06,832 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:08:15] 2025-06-03 22:08:07,838 | INFO     | [job] queue monitor thread has finished
[2025-06-03 18:08:15] 2025-06-03 22:08:08,766 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 18:08:15] 2025-06-03 22:08:10,050 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140067458787136)>', '<ExcThread(monitor, started 140067154663168)>']
[2025-06-03 18:08:15] 2025-06-03 22:08:10,458 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 18:08:15] 2025-06-03 22:08:10,458 | INFO     | [monitor] control thread has ended
[2025-06-03 18:08:15] 2025-06-03 22:08:15,074 | INFO     | all workflow threads have been joined
[2025-06-03 18:08:15] 2025-06-03 22:08:15,075 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 18:08:15] 2025-06-03 22:08:15,075 | INFO     | traces error code: 0
[2025-06-03 18:08:15] 2025-06-03 22:08:15,075 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 18:08:15] 2025-06-03 22:08:15,383 [wrapper] ==== pilot stdout END ====
[2025-06-03 18:08:15] 2025-06-03 22:08:15,386 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 18:08:15] 2025-06-03 22:08:15,406 [wrapper] pilotpid: 309
[2025-06-03 18:08:15] 2025-06-03 22:08:15,409 [wrapper] Pilot exit status: 0
[2025-06-03 18:08:15] 2025-06-03 22:08:15,428 [wrapper] pandaids: 6677637464
[2025-06-03 18:08:15] 2025-06-03 22:08:15,514 [wrapper] cleanup supervisor_pilot 11151 311
[2025-06-03 18:08:15] 2025-06-03 22:08:15,518 [wrapper] Test setup, not cleaning
[2025-06-03 18:08:15] 2025-06-03 22:08:15,522 [wrapper] apfmon messages muted
[2025-06-03 18:08:15] 2025-06-03 22:08:15,526 [wrapper] ==== wrapper stdout END ====
[2025-06-03 18:08:15] 2025-06-03 22:08:15,529 [wrapper] ==== wrapper stderr END ====
[2025-06-03 18:08:15]  *** Error codes and diagnostics ***
[2025-06-03 18:08:15]     "exeErrorCode": 0,
[2025-06-03 18:08:15]     "exeErrorDiag": "",
[2025-06-03 18:08:15]     "pilotErrorCode": 0,
[2025-06-03 18:08:15]     "pilotErrorDiag": "",
[2025-06-03 18:08:15]  *** Listing of results directory ***
[2025-06-03 18:08:15] total 390168
[2025-06-03 18:08:15] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 09:40 pilot3.tar.gz
[2025-06-03 18:08:15] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 09:51 queuedata.json
[2025-06-03 18:08:15] -rwx------ 1 boincer umatlas     37140 Jun  3 09:52 runpilot2-wrapper.sh
[2025-06-03 18:08:15] -rw-r--r-- 1 boincer umatlas       100 Jun  3 13:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 18:08:15] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 13:37 run_atlas
[2025-06-03 18:08:15] -rw-r--r-- 1 boincer umatlas       105 Jun  3 13:37 job.xml
[2025-06-03 18:08:15] -rw-r--r-- 2 boincer umatlas 214114227 Jun  3 13:37 EVNT.45006593._001398.pool.root.1
[2025-06-03 18:08:15] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 13:37 start_atlas.sh
[2025-06-03 18:08:15] drwxrwx--x 2 boincer umatlas      4096 Jun  3 13:37 shared
[2025-06-03 18:08:15] -rw-r--r-- 2 boincer umatlas    508887 Jun  3 13:37 input.tar.gz
[2025-06-03 18:08:15] -rw-r--r-- 1 boincer umatlas         0 Jun  3 13:37 boinc_lockfile
[2025-06-03 18:08:15] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 13:37 pandaJob.out
[2025-06-03 18:08:15] -rw------- 1 boincer umatlas    985078 Jun  3 13:37 agis_schedconf.cvmfs.json
[2025-06-03 18:08:15] drwx------ 4 boincer umatlas      4096 Jun  3 13:37 pilot3
[2025-06-03 18:08:15] -rw-r--r-- 1 boincer umatlas      6227 Jun  3 18:02 init_data.xml
[2025-06-03 18:08:15] -rw------- 1 boincer umatlas 178163705 Jun  3 18:07 HITS.45006595._034759.pool.root.1
[2025-06-03 18:08:15] -rw-r--r-- 1 boincer umatlas       531 Jun  3 18:07 boinc_task_state.xml
[2025-06-03 18:08:15] -rw------- 1 boincer umatlas      1057 Jun  3 18:07 memory_monitor_summary.json
[2025-06-03 18:08:15] -rw------- 1 boincer umatlas        95 Jun  3 18:07 pilot_heartbeat.json
[2025-06-03 18:08:15] -rw------- 1 boincer umatlas   1603667 Jun  3 18:07 agis_ddmendpoints.agis.ALL.json
[2025-06-03 18:08:15] -rw------- 1 boincer umatlas    398955 Jun  3 18:07 log.45006595._034759.job.log.tgz.1
[2025-06-03 18:08:15] -rw------- 1 boincer umatlas      7742 Jun  3 18:08 heartbeat.json
[2025-06-03 18:08:15] -rw-r--r-- 1 boincer umatlas        28 Jun  3 18:08 wrapper_checkpoint.txt
[2025-06-03 18:08:15] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 18:08 boinc_mmap_file
[2025-06-03 18:08:15] -rw------- 1 boincer umatlas      4353 Jun  3 18:08 pilotlog.txt
[2025-06-03 18:08:15] -rw------- 1 boincer umatlas   1313850 Jun  3 18:08 log.45006595._034759.job.log.1
[2025-06-03 18:08:15] -rw------- 1 boincer umatlas       357 Jun  3 18:08 output.list
[2025-06-03 18:08:15] -rw-r--r-- 1 boincer umatlas       620 Jun  3 18:08 runtime_log
[2025-06-03 18:08:15] -rw------- 1 boincer umatlas   1730560 Jun  3 18:08 result.tar.gz
[2025-06-03 18:08:15] -rw-r--r-- 1 boincer umatlas      8655 Jun  3 18:08 runtime_log.err
[2025-06-03 18:08:15] -rw------- 1 boincer umatlas       660 Jun  3 18:08 OzFNDmFFhg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCTkKDmEWZqKn.diag
[2025-06-03 18:08:15] -rw-r--r-- 1 boincer umatlas     20872 Jun  3 18:08 stderr.txt
[2025-06-03 18:08:15] HITS file was successfully produced:
[2025-06-03 18:08:15] -rw------- 1 boincer umatlas 178163705 Jun  3 18:07 shared/HITS.pool.root.1
[2025-06-03 18:08:15]  *** Contents of shared directory: ***
[2025-06-03 18:08:15] total 385296
[2025-06-03 18:08:15] -rw-r--r-- 2 boincer umatlas 214114227 Jun  3 13:37 ATLAS.root_0
[2025-06-03 18:08:15] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 13:37 start_atlas.sh
[2025-06-03 18:08:15] -rw-r--r-- 2 boincer umatlas    508887 Jun  3 13:37 input.tar.gz
[2025-06-03 18:08:15] -rw------- 1 boincer umatlas 178163705 Jun  3 18:07 HITS.pool.root.1
[2025-06-03 18:08:15] -rw------- 1 boincer umatlas   1730560 Jun  3 18:08 result.tar.gz
18:08:17 (36773): run_atlas exited; CPU time 45685.470525
18:08:17 (36773): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN