Name xEwKDmDZgg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJGkKDmDISsJm_2
Workunit 232819385
Created 3 Jun 2025, 16:33:48 UTC
Sent 3 Jun 2025, 17:37:54 UTC
Report deadline 11 Jun 2025, 17:37:54 UTC
Received 6 Jun 2025, 15:54:05 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10875047
Run time 5 hours 32 min 33 sec
CPU time 1 days 14 hours 10 min 49 sec
Validate state Valid
Credit 338.78
Device peak FLOPS 12.00 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.66 GB
Peak swap size 31.65 GB
Peak disk usage 967.25 MB

Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:38:27 (556387): wrapper (7.7.26015): starting
13:38:27 (556387): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 13:38:27] Arguments: --nthreads 8
[2025-06-03 13:38:27] Threads: 8
[2025-06-03 13:38:27] Checking for CVMFS
[2025-06-03 13:38:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:38:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:38:27] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:38:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:38:27] 2.12.6.0 2097083 99873 850312 146750 1 194 19929357 21042177 3039 130560 3 167634159 99.315 304981478 23293 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 13:38:27] CVMFS is ok
[2025-06-03 13:38:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 13:38:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 13:38:27] Further information can be found at the LHC@home message board.
[2025-06-03 13:38:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:38:27] Checking for apptainer binary...
[2025-06-03 13:38:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:38:27] Running /usr/bin/apptainer --version
[2025-06-03 13:38:27] apptainer version 1.4.1-1.el9
[2025-06-03 13:38:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:38:27] c-16-16.aglt2.org
[2025-06-03 13:38:27] apptainer works
[2025-06-03 13:38:27] Set ATHENA_PROC_NUMBER=8
[2025-06-03 13:38:27] Set ATHENA_CORE_NUMBER=8
[2025-06-03 13:38:27] Starting ATLAS job with PandaID=6677621011
[2025-06-03 13:38:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
07:12:36 (1729225): wrapper (7.7.26015): starting
07:12:36 (1729225): wrapper: running run_atlas (--nthreads 10)
[2025-06-06 07:12:36] Arguments: --nthreads 10
[2025-06-06 07:12:36] Threads: 10
[2025-06-06 07:12:36] This job has been restarted, cleaning up previous attempt
[2025-06-06 07:12:36] Checking for CVMFS
[2025-06-06 07:12:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 07:12:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 07:12:37] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 07:12:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 07:12:37] 2.12.6.0 3989 757 97340 146854 3 209 19000408 21042177 8423 16776704 0 2009505 97.370 10891977 35738 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 07:12:37] CVMFS is ok
[2025-06-06 07:12:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 07:12:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 07:12:37] Further information can be found at the LHC@home message board.
[2025-06-06 07:12:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 07:12:37] Checking for apptainer binary...
[2025-06-06 07:12:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 07:12:37] Running /usr/bin/apptainer --version
[2025-06-06 07:12:37] apptainer version 1.4.1-1.el9
[2025-06-06 07:12:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 07:12:37] c-16-16.aglt2.org
[2025-06-06 07:12:37] apptainer works
[2025-06-06 07:12:37] Set ATHENA_PROC_NUMBER=10
[2025-06-06 07:12:37] Set ATHENA_CORE_NUMBER=10
[2025-06-06 07:12:37] Starting ATLAS job with PandaID=6677621011
[2025-06-06 07:12:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 07:15:44] Job failed
[2025-06-06 07:15:44] ++ pwd
[2025-06-06 07:15:44] + export RUNTIME_CONFIG_DIR=/tmp/boinchome/slots/0/
[2025-06-06 07:15:44] + RUNTIME_CONFIG_DIR=/tmp/boinchome/slots/0/
[2025-06-06 07:15:44] + mv ATLAS.root_0 EVNT.45006593._001340.pool.root.1
[2025-06-06 07:15:44] mv: &#226;&#128;&#152;ATLAS.root_0&#226;&#128;&#153; and &#226;&#128;&#152;EVNT.45006593._001340.pool.root.1&#226;&#128;&#153; are the same file
[2025-06-06 07:15:44] + tar --strip-components=5 -xvf input.tar.gz
[2025-06-06 07:15:44] + umask 077
[2025-06-06 07:15:44] ++ date +%s
[2025-06-06 07:15:44] + ACCOUNTING_STARTTIME=1749208357
[2025-06-06 07:15:44] + echo 'Detecting resource accounting method available for the job.'
[2025-06-06 07:15:44] Detecting resource accounting method available for the job.
[2025-06-06 07:15:44] + JOB_ACCOUNTING=
[2025-06-06 07:15:44] + command -v arc-job-cgroup
[2025-06-06 07:15:44] + '[' -z '' ']'
[2025-06-06 07:15:44] + GNU_TIME=/usr/bin/time
[2025-06-06 07:15:44] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2025-06-06 07:15:44] Looking for /usr/bin/time tool for accounting measurements
[2025-06-06 07:15:44] + '[' '!' -z /usr/bin/time ']'
[2025-06-06 07:15:44] + /usr/bin/time --version
[2025-06-06 07:15:44] + echo 'GNU time found and will be used for job accounting.'
[2025-06-06 07:15:44] GNU time found and will be used for job accounting.
[2025-06-06 07:15:44] + JOB_ACCOUNTING=gnutime
[2025-06-06 07:15:44] + '[' -z gnutime ']'
[2025-06-06 07:15:44] + export PANDA_JSID=harvester-CERN_central_ACTA
[2025-06-06 07:15:44] + PANDA_JSID=harvester-CERN_central_ACTA
[2025-06-06 07:15:44] + export GTAG=http://aipanda404.cern.ch/data/jobs/2025-06-03/BOINC_MCORE/6677621011.out
[2025-06-06 07:15:44] + GTAG=http://aipanda404.cern.ch/data/jobs/2025-06-03/BOINC_MCORE/6677621011.out
[2025-06-06 07:15:44] + export PILOT_NOKILL=YES
[2025-06-06 07:15:44] + PILOT_NOKILL=YES
[2025-06-06 07:15:44] + export GRID_GLOBAL_JOBID=xEwKDmDZgg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJGkKDmDISsJm
[2025-06-06 07:15:44] + GRID_GLOBAL_JOBID=xEwKDmDZgg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJGkKDmDISsJm
[2025-06-06 07:15:44] + export GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/xEwKDmDZgg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJGkKDmDISsJm
[2025-06-06 07:15:44] + GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/xEwKDmDZgg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJGkKDmDISsJm
[2025-06-06 07:15:44] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-06-06 07:15:44] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-06-06 07:15:44] + export GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-06-06 07:15:44] + GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-06-06 07:15:44] ++ pwd
[2025-06-06 07:15:44] + RUNTIME_JOB_DIR=/tmp/boinchome/slots/0
[2025-06-06 07:15:44] + RUNTIME_JOB_STDIN=/dev/null
[2025-06-06 07:15:44] ++ pwd
[2025-06-06 07:15:44] + RUNTIME_JOB_STDOUT=/tmp/boinchome/slots/0/log.45006595._033305.job.log.1
[2025-06-06 07:15:44] ++ pwd
[2025-06-06 07:15:44] + RUNTIME_JOB_STDERR=/tmp/boinchome/slots/0/log.45006595._033305.job.log.1
[2025-06-06 07:15:44] ++ pwd
[2025-06-06 07:15:44] + RUNTIME_JOB_DIAG=/tmp/boinchome/slots/0.diag
[2025-06-06 07:15:44] + '[' '!' -z '' ']'
[2025-06-06 07:15:44] + RUNTIME_LOCAL_SCRATCH_DIR=
[2025-06-06 07:15:44] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2025-06-06 07:15:44] + RUNTIME_FRONTEND_SEES_NODE=
[2025-06-06 07:15:44] + RUNTIME_NODE_SEES_FRONTEND=yes
[2025-06-06 07:15:44] + '[' '!' -z '' ']'
[2025-06-06 07:15:44] + '[' -z yes ']'
[2025-06-06 07:15:44] ++ pwd
[2025-06-06 07:15:44] + RUNTIME_JOB_DIAG=/tmp/boinchome/slots/0/xEwKDmDZgg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJGkKDmDISsJm.diag
[2025-06-06 07:15:44] + runtimeenvironments=
[2025-06-06 07:15:44] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-06-06 07:15:44] + RTE_function_0 1
[2025-06-06 07:15:44] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-06-06 07:15:44] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-06-06 07:15:44] + export BOINC_APP=ATLAS
[2025-06-06 07:15:44] + BOINC_APP=ATLAS
[2025-06-06 07:15:44] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-06-06 07:15:44] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-06-06 07:15:44] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-06-06 07:15:44] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-06-06 07:15:44] + '[' -z 1 ']'
[2025-06-06 07:15:44] + '[' 1 == 1 ']'
[2025-06-06 07:15:44] + shift
[2025-06-06 07:15:44] + export ATLAS_LOCAL_AREA=/tmp/boinchome/slots/0/
[2025-06-06 07:15:44] + ATLAS_LOCAL_AREA=/tmp/boinchome/slots/0/
[2025-06-06 07:15:44] + '[' 0 -ne 0 ']'
[2025-06-06 07:15:44] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2025-06-06 07:15:44] + '[' -f /etc/os-release ']'
[2025-06-06 07:15:44] +++ cat /etc/os-release
[2025-06-06 07:15:44] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2025-06-06 07:15:44] +++ NAME='CentOS Linux'
[2025-06-06 07:15:44] +++ VERSION='7 (Core)'
[2025-06-06 07:15:44] +++ ID=centos
[2025-06-06 07:15:44] +++ ID_LIKE='rhel fedora'
[2025-06-06 07:15:44] +++ VERSION_ID=7
[2025-06-06 07:15:44] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2025-06-06 07:15:44] +++ ANSI_COLOR='0;31'
[2025-06-06 07:15:44] +++ CPE_NAME=cpe:/o:centos:centos:7
[2025-06-06 07:15:44] +++ HOME_URL=https://www.centos.org/
[2025-06-06 07:15:44] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2025-06-06 07:15:44] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2025-06-06 07:15:44] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2025-06-06 07:15:44] +++ REDHAT_SUPPORT_PRODUCT=centos
[2025-06-06 07:15:44] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2025-06-06 07:15:44] ++ echo 'CentOS Linux 7 (Core)'
[2025-06-06 07:15:44] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2025-06-06 07:15:44] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2025-06-06 07:15:44] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2025-06-06 07:15:44] + HOME=/tmp/boinchome/slots/0
[2025-06-06 07:15:44] + export HOME
[2025-06-06 07:15:44] + cd /tmp/boinchome/slots/0
[2025-06-06 07:15:44] + '[' '!' -z '' ']'
[2025-06-06 07:15:44] + '[' -z '' ']'
[2025-06-06 07:15:44] ++ /bin/hostname -f
[2025-06-06 07:15:44] + nodename=c-16-16.aglt2.org
[2025-06-06 07:15:44] + echo nodename=c-16-16.aglt2.org
[2025-06-06 07:15:44] + echo Processors=2
[2025-06-06 07:15:44] + echo Nodecount=1
[2025-06-06 07:15:44] + echo Benchmark=HEPSPEC:1.0
[2025-06-06 07:15:44] + executable=./runpilot2-wrapper.sh
[2025-06-06 07:15:44] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2025-06-06 07:15:44] ++ dd if=./runpilot2-wrapper.sh count=1
[2025-06-06 07:15:44] ++ head -n 1
[2025-06-06 07:15:44] ++ tr -d '\0'
[2025-06-06 07:15:44] + line1='#!/bin/bash'
[2025-06-06 07:15:44] ++ echo '#!/bin/bash'
[2025-06-06 07:15:44] ++ sed -n 's/^#! *//p'
[2025-06-06 07:15:44] + shebang=/bin/bash
[2025-06-06 07:15:44] ++ echo /bin/bash
[2025-06-06 07:15:44] ++ awk '{print $1}'
[2025-06-06 07:15:44] + interpreter=/bin/bash
[2025-06-06 07:15:44] + '[' /bin/bash = /usr/bin/env ']'
[2025-06-06 07:15:44] + '[' x/bin/bash = x ']'
[2025-06-06 07:15:44] + type /bin/bash
[2025-06-06 07:15:44] + '[' xgnutime = xgnutime ']'
[2025-06-06 07:15:44] + /usr/bin/time -o /tmp/boinchome/slots/0/xEwKDmDZgg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJGkKDmDISsJm.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.10.2.2 -z -t --piloturl local --mute --container
[2025-06-06 07:15:44] + RESULT=2
[2025-06-06 07:15:44] + sed -i -e /nodename=/d /tmp/boinchome/slots/0/xEwKDmDZgg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJGkKDmDISsJm.diag
[2025-06-06 07:15:44] ++ grep domain_name init_data.xml
[2025-06-06 07:15:44] ++ awk -F '>' '{print $2}'
[2025-06-06 07:15:44] ++ awk -F '<' '{print $1}'
[2025-06-06 07:15:44] ++ sed -e 's# #_#g'
[2025-06-06 07:15:44] + hostname=c-16-16.aglt2.org
[2025-06-06 07:15:44] ++ grep user_name init_data.xml
[2025-06-06 07:15:44] ++ awk -F '>' '{print $2}'
[2025-06-06 07:15:44] ++ awk -F '<' '{print $1}'
[2025-06-06 07:15:44] ++ sed -e 's# #_#g'
[2025-06-06 07:15:44] + username=AGLT2
[2025-06-06 07:15:44] + nodename=AGLT2@c-16-16.aglt2.org
[2025-06-06 07:15:44] + echo nodename=AGLT2@c-16-16.aglt2.org
[2025-06-06 07:15:44] + '[' -n 10 ']'
[2025-06-06 07:15:44] + sed -i -e s/Processors=1/Processors=10/ /tmp/boinchome/slots/0/xEwKDmDZgg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJGkKDmDISsJm.diag
[2025-06-06 07:15:44] + echo exitcode=2
[2025-06-06 07:15:44] + runtimeenvironments=
[2025-06-06 07:15:44] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-06-06 07:15:44] + RTE_function_0 2
[2025-06-06 07:15:44] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-06-06 07:15:44] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-06-06 07:15:44] + export BOINC_APP=ATLAS
[2025-06-06 07:15:44] + BOINC_APP=ATLAS
[2025-06-06 07:15:44] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-06-06 07:15:44] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-06-06 07:15:44] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-06-06 07:15:44] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-06-06 07:15:44] + '[' -z 2 ']'
[2025-06-06 07:15:44] + '[' 2 == 1 ']'
[2025-06-06 07:15:44] + '[' 0 -ne 0 ']'
[2025-06-06 07:15:44] + echo 'zip all output files'
[2025-06-06 07:15:44] + flist='*.diag '
[2025-06-06 07:15:44] + for f in ./heartbeat.json ./output.list ./log.45006595._033305.job.log.1 ./log.45006595._033305.job.log.1 ./gmlog/
[2025-06-06 07:15:44] + '[' -e ./heartbeat.json ']'
[2025-06-06 07:15:44] + flist='*.diag  ./heartbeat.json'
[2025-06-06 07:15:44] + for f in ./heartbeat.json ./output.list ./log.45006595._033305.job.log.1 ./log.45006595._033305.job.log.1 ./gmlog/
[2025-06-06 07:15:44] + '[' -e ./output.list ']'
[2025-06-06 07:15:44] + for f in ./heartbeat.json ./output.list ./log.45006595._033305.job.log.1 ./log.45006595._033305.job.log.1 ./gmlog/
[2025-06-06 07:15:44] + '[' -e ./log.45006595._033305.job.log.1 ']'
[2025-06-06 07:15:44] + flist='*.diag  ./heartbeat.json ./log.45006595._033305.job.log.1'
[2025-06-06 07:15:44] + for f in ./heartbeat.json ./output.list ./log.45006595._033305.job.log.1 ./log.45006595._033305.job.log.1 ./gmlog/
[2025-06-06 07:15:44] + '[' -e ./log.45006595._033305.job.log.1 ']'
[2025-06-06 07:15:44] + flist='*.diag  ./heartbeat.json ./log.45006595._033305.job.log.1 ./log.45006595._033305.job.log.1'
[2025-06-06 07:15:44] + for f in ./heartbeat.json ./output.list ./log.45006595._033305.job.log.1 ./log.45006595._033305.job.log.1 ./gmlog/
[2025-06-06 07:15:44] + '[' -e ./gmlog/ ']'
[2025-06-06 07:15:44] + '[' -f output.list ']'
[2025-06-06 07:15:44] + tar cvf result.tar.gz xEwKDmDZgg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJGkKDmDISsJm.diag ./heartbeat.json ./log.45006595._033305.job.log.1 ./log.45006595._033305.job.log.1
[2025-06-06 07:15:44] + '[' xgnutime = xcgroup ']'
[2025-06-06 07:15:44] + '[' -n '' ']'
[2025-06-06 07:15:44] + '[' -n '' ']'
[2025-06-06 07:15:44] ++ date +%s
[2025-06-06 07:15:44] + ACCOUNTING_ENDTIME=1749208544
[2025-06-06 07:15:44] ++ date -d '1970-01-01 UTC 1749208357 seconds' +%Y%m%d%H%M%SZ
[2025-06-06 07:15:44] + echo LRMSStartTime=20250606071237Z
[2025-06-06 07:15:44] ++ date -d '1970-01-01 UTC 1749208544 seconds' +%Y%m%d%H%M%SZ
[2025-06-06 07:15:44] + echo LRMSEndTime=20250606071544Z
[2025-06-06 07:15:44] + echo walltime=187
[2025-06-06 07:15:44] + echo exitcode=2
[2025-06-06 07:15:44] + exit 2
[2025-06-06 07:15:44] ./log.45006595._033305.job.log.1
[2025-06-06 07:15:44] ./pilot3/pilot/util/loggingsupport.py
[2025-06-06 07:15:44] ./pilot3/pilot/util/lokirealtimelogger.py
[2025-06-06 07:15:44] ./pilot3/pilot/util/realtimelogger.py
[2025-06-06 07:15:44] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2025-06-06 07:15:44] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2025-06-06 07:15:44] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2025-06-06 07:15:44] ./log.45006595._033305.job.log.tgz.1
[2025-06-06 07:15:44] ./PanDA_Pilot-6677621011/prmon.log
[2025-06-06 07:15:44] ./PanDA_Pilot-6677621011/log.EVNTtoHITS
[2025-06-06 07:15:44] ./PanDA_Pilot-6677621011/PoolFileCatalog.xml
[2025-06-06 07:15:44] ./PanDA_Pilot-6677621011/pilotlog.txt
[2025-06-06 07:15:44] ./runtime_log
[2025-06-06 07:15:44] ./runtime_log.err
[2025-06-06 07:15:44] ./pilotlog.txt
07:30:27 (1814553): wrapper (7.7.26015): starting
07:30:27 (1814553): wrapper: running run_atlas (--nthreads 10)
[2025-06-06 07:30:27] Arguments: --nthreads 10
[2025-06-06 07:30:27] Threads: 10
[2025-06-06 07:30:27] This job has been restarted, cleaning up previous attempt
[2025-06-06 07:30:27] Checking for CVMFS
[2025-06-06 07:30:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 07:30:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 07:30:28] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 07:30:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 07:30:29] 2.12.6.0 3989 775 147652 146854 1 614 19617702 21042177 11874 16776704 0 2130338 97.491 11047362 35656 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-06 07:30:29] CVMFS is ok
[2025-06-06 07:30:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 07:30:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 07:30:29] Further information can be found at the LHC@home message board.
[2025-06-06 07:30:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 07:30:29] Checking for apptainer binary...
[2025-06-06 07:30:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 07:30:29] Running /usr/bin/apptainer --version
[2025-06-06 07:30:29] apptainer version 1.4.1-1.el9
[2025-06-06 07:30:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 07:30:30] c-16-16.aglt2.org
[2025-06-06 07:30:30] apptainer works
[2025-06-06 07:30:30] Set ATHENA_PROC_NUMBER=10
[2025-06-06 07:30:30] Set ATHENA_CORE_NUMBER=10
[2025-06-06 07:30:30] Starting ATLAS job with PandaID=6677621011
[2025-06-06 07:30:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 11:50:10]  *** The last 200 lines of the pilot log: ***
[2025-06-06 11:50:10] 2025-06-06 15:49:55,769 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-06 11:50:10] 2025-06-06 15:49:55,785 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677621011/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 11:50:10] 2025-06-06 15:49:55,786 | INFO     | extracted standard info from prmon json
[2025-06-06 11:50:10] 2025-06-06 15:49:55,787 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 11:50:10] 2025-06-06 15:49:55,787 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 11:50:10] 2025-06-06 15:49:55,788 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 11:50:10] 2025-06-06 15:49:55,788 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 11:50:10] 2025-06-06 15:49:55,822 | INFO     | fitting pss+swap vs Time
[2025-06-06 11:50:10] 2025-06-06 15:49:55,823 | INFO     | sum of square deviations: 5021706752.632396
[2025-06-06 11:50:10] 2025-06-06 15:49:55,825 | INFO     | sum of deviations: 44576913404.84584
[2025-06-06 11:50:10] 2025-06-06 15:49:55,834 | INFO     | mean x: 1749217223.450593
[2025-06-06 11:50:10] 2025-06-06 15:49:55,834 | INFO     | mean y: 2205423.0276679844
[2025-06-06 11:50:10] 2025-06-06 15:49:55,834 | INFO     | -- intersect: -15525325063.524012
[2025-06-06 11:50:10] 2025-06-06 15:49:55,834 | INFO     | intersect: -15525325063.524012
[2025-06-06 11:50:10] 2025-06-06 15:49:55,835 | INFO     | chi2: 2.176471971149267
[2025-06-06 11:50:10] 2025-06-06 15:49:55,835 | INFO     | sum of square deviations: 4729866281.596795
[2025-06-06 11:50:10] 2025-06-06 15:49:55,857 | INFO     | sum of deviations: 50665347859.27415
[2025-06-06 11:50:10] 2025-06-06 15:49:55,857 | INFO     | mean x: 1749217070.9596775
[2025-06-06 11:50:10] 2025-06-06 15:49:55,857 | INFO     | mean y: 2208607.9274193547
[2025-06-06 11:50:10] 2025-06-06 15:49:55,857 | INFO     | -- intersect: -18735042321.634407
[2025-06-06 11:50:10] 2025-06-06 15:49:55,857 | INFO     | intersect: -18735042321.634407
[2025-06-06 11:50:10] 2025-06-06 15:49:55,858 | INFO     | chi2: 2.1333185143796176
[2025-06-06 11:50:10] 2025-06-06 15:49:55,858 | INFO     | current chi2=2.1333185143796176 (change=1.9827251323095436 %)
[2025-06-06 11:50:10] 2025-06-06 15:49:55,858 | INFO     | right removable region: 247
[2025-06-06 11:50:10] 2025-06-06 15:49:55,859 | INFO     | sum of square deviations: 4729796741.596796
[2025-06-06 11:50:10] 2025-06-06 15:49:55,869 | INFO     | sum of deviations: -531380881.7419441
[2025-06-06 11:50:10] 2025-06-06 15:49:55,869 | INFO     | mean x: 1749217375.9596775
[2025-06-06 11:50:10] 2025-06-06 15:49:55,869 | INFO     | mean y: 2228894.2258064514
[2025-06-06 11:50:10] 2025-06-06 15:49:55,869 | INFO     | -- intersect: 198749109.02090997
[2025-06-06 11:50:10] 2025-06-06 15:49:55,870 | INFO     | intersect: 198749109.02090997
[2025-06-06 11:50:10] 2025-06-06 15:49:55,870 | INFO     | chi2: 0.3902016898032081
[2025-06-06 11:50:10] 2025-06-06 15:49:55,870 | INFO     | current chi2=0.3902016898032081 (change=82.07182564371985 %)
[2025-06-06 11:50:10] 2025-06-06 15:49:55,871 | INFO     | sum of square deviations: 4449421830.518543
[2025-06-06 11:50:10] 2025-06-06 15:49:55,888 | INFO     | sum of deviations: -14781156231.530869
[2025-06-06 11:50:10] 2025-06-06 15:49:55,888 | INFO     | mean x: 1749217528.4691358
[2025-06-06 11:50:10] 2025-06-06 15:49:55,888 | INFO     | mean y: 2236577.329218107
[2025-06-06 11:50:10] 2025-06-06 15:49:55,888 | INFO     | -- intersect: 5813206756.3965845
[2025-06-06 11:50:10] 2025-06-06 15:49:55,889 | INFO     | intersect: 5813206756.3965845
[2025-06-06 11:50:10] 2025-06-06 15:49:55,889 | INFO     | chi2: 0.14082053069781617
[2025-06-06 11:50:10] 2025-06-06 15:49:55,889 | INFO     | current chi2=0.14082053069781617 (change=63.9108352480901 %)
[2025-06-06 11:50:10] 2025-06-06 15:49:55,890 | INFO     | sum of square deviations: 4180393435.731077
[2025-06-06 11:50:10] 2025-06-06 15:49:55,901 | INFO     | sum of deviations: -13895954016.99159
[2025-06-06 11:50:10] 2025-06-06 15:49:55,901 | INFO     | mean x: 1749217680.9663866
[2025-06-06 11:50:10] 2025-06-06 15:49:55,901 | INFO     | mean y: 2236071.62605042
[2025-06-06 11:50:10] 2025-06-06 15:49:55,902 | INFO     | -- intersect: 5816772151.569612
[2025-06-06 11:50:10] 2025-06-06 15:49:55,902 | INFO     | intersect: 5816772151.569612
[2025-06-06 11:50:10] 2025-06-06 15:49:55,902 | INFO     | chi2: 0.14013925342060324
[2025-06-06 11:50:10] 2025-06-06 15:49:55,902 | INFO     | current chi2=0.14013925342060324 (change=0.4837911587443637 %)
[2025-06-06 11:50:10] 2025-06-06 15:49:55,903 | INFO     | left removable region: 30
[2025-06-06 11:50:10] 2025-06-06 15:49:55,903 | INFO     | sum of square deviations: 3168622632.221211
[2025-06-06 11:50:10] 2025-06-06 15:49:55,915 | INFO     | sum of deviations: -2880475010.433179
[2025-06-06 11:50:10] 2025-06-06 15:49:55,915 | INFO     | mean x: 1749217955.4884794
[2025-06-06 11:50:10] 2025-06-06 15:49:55,916 | INFO     | mean y: 2238560.6267281105
[2025-06-06 11:50:10] 2025-06-06 15:49:55,916 | INFO     | -- intersect: 1592386455.5982184
[2025-06-06 11:50:10] 2025-06-06 15:49:55,916 | INFO     | intersect: 1592386455.5982184
[2025-06-06 11:50:10] 2025-06-06 15:49:55,916 | INFO     | chi2: 0.09034184282237279
[2025-06-06 11:50:10] 2025-06-06 15:49:55,917 | INFO     | -- intersect: 1592386455.5982184
[2025-06-06 11:50:10] 2025-06-06 15:49:55,917 | INFO     | current memory leak: -0.91 B/s (using 217 data points, chi2=0.09)
[2025-06-06 11:50:10] 2025-06-06 15:49:55,918 | INFO     | ..............................
[2025-06-06 11:50:10] 2025-06-06 15:49:55,918 | INFO     | . Timing measurements:
[2025-06-06 11:50:10] 2025-06-06 15:49:55,918 | INFO     | . get job = 0 s
[2025-06-06 11:50:10] 2025-06-06 15:49:55,918 | INFO     | . initial setup = 2 s
[2025-06-06 11:50:10] 2025-06-06 15:49:55,918 | INFO     | . payload setup = 15 s
[2025-06-06 11:50:10] 2025-06-06 15:49:55,918 | INFO     | . stage-in = 0 s
[2025-06-06 11:50:10] 2025-06-06 15:49:55,928 | INFO     | . payload execution = 15443 s
[2025-06-06 11:50:10] 2025-06-06 15:49:55,928 | INFO     | . stage-out = 4 s
[2025-06-06 11:50:10] 2025-06-06 15:49:55,928 | INFO     | . log creation = 0 s
[2025-06-06 11:50:10] 2025-06-06 15:49:55,928 | INFO     | ..............................
[2025-06-06 11:50:10] 2025-06-06 15:49:56,246 | INFO     | 
[2025-06-06 11:50:10] 2025-06-06 15:49:56,247 | INFO     | job summary report
[2025-06-06 11:50:10] 2025-06-06 15:49:56,247 | INFO     | --------------------------------------------------
[2025-06-06 11:50:10] 2025-06-06 15:49:56,247 | INFO     | PanDA job id: 6677621011
[2025-06-06 11:50:10] 2025-06-06 15:49:56,247 | INFO     | task id: 45006595
[2025-06-06 11:50:10] 2025-06-06 15:49:56,247 | INFO     | errors: (none)
[2025-06-06 11:50:10] 2025-06-06 15:49:56,248 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 11:50:10] 2025-06-06 15:49:56,248 | INFO     | pilot state: finished 
[2025-06-06 11:50:10] 2025-06-06 15:49:56,248 | INFO     | transexitcode: 0
[2025-06-06 11:50:10] 2025-06-06 15:49:56,248 | INFO     | exeerrorcode: 0
[2025-06-06 11:50:10] 2025-06-06 15:49:56,248 | INFO     | exeerrordiag: 
[2025-06-06 11:50:10] 2025-06-06 15:49:56,248 | INFO     | exitcode: 0
[2025-06-06 11:50:10] 2025-06-06 15:49:56,248 | INFO     | exitmsg: OK
[2025-06-06 11:50:10] 2025-06-06 15:49:56,248 | INFO     | cpuconsumptiontime: 68891 s
[2025-06-06 11:50:10] 2025-06-06 15:49:56,249 | INFO     | nevents: 400
[2025-06-06 11:50:10] 2025-06-06 15:49:56,249 | INFO     | neventsw: 0
[2025-06-06 11:50:10] 2025-06-06 15:49:56,249 | INFO     | pid: 1825166
[2025-06-06 11:50:10] 2025-06-06 15:49:56,249 | INFO     | pgrp: 1825166
[2025-06-06 11:50:10] 2025-06-06 15:49:56,249 | INFO     | corecount: 10
[2025-06-06 11:50:10] 2025-06-06 15:49:56,249 | INFO     | event service: False
[2025-06-06 11:50:10] 2025-06-06 15:49:56,249 | INFO     | sizes: {0: 2396514, 1: 2397199, 2: 2397398, 13: 2397398, 19: 2397660, 24: 2397688, 15463: 2428552, 15468: 2437549, 15490: 2437663}
[2025-06-06 11:50:10] 2025-06-06 15:49:56,249 | INFO     | --------------------------------------------------
[2025-06-06 11:50:10] 2025-06-06 15:49:56,250 | INFO     | 
[2025-06-06 11:50:10] 2025-06-06 15:49:56,250 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-06 11:50:10] 2025-06-06 15:49:56,276 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 11:50:10] 2025-06-06 15:49:56,276 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 11:50:10] 2025-06-06 15:49:56,276 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 11:50:10] 2025-06-06 15:49:56,277 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 11:50:10] 2025-06-06 15:49:56,277 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 11:50:10] 2025-06-06 15:49:56,277 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 11:50:10] 2025-06-06 15:49:56,277 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 11:50:10] 2025-06-06 15:49:56,277 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 11:50:10] 2025-06-06 15:49:56,277 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 11:50:10] 2025-06-06 15:49:56,277 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 11:50:10] 2025-06-06 15:49:56,278 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 11:50:10] 2025-06-06 15:49:56,278 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 11:50:10] 2025-06-06 15:49:56,278 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 11:50:10] 2025-06-06 15:49:56,278 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 11:50:10] 2025-06-06 15:49:56,278 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 11:50:10] 2025-06-06 15:49:56,278 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 11:50:10] 2025-06-06 15:49:56,279 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 11:50:10] 2025-06-06 15:49:56,279 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 11:50:10] 2025-06-06 15:49:56,279 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 11:50:10] 2025-06-06 15:49:56,279 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 11:50:10] 2025-06-06 15:49:56,279 | INFO     | job 6677621011 has completed (purged errors)
[2025-06-06 11:50:10] 2025-06-06 15:49:56,285 | INFO     | overall cleanup function is called
[2025-06-06 11:50:10] 2025-06-06 15:49:57,294 | INFO     | --- collectZombieJob: --- 10, [1825166]
[2025-06-06 11:50:10] 2025-06-06 15:49:57,294 | INFO     | zombie collector waiting for pid 1825166
[2025-06-06 11:50:10] 2025-06-06 15:49:57,294 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 11:50:10] 2025-06-06 15:49:57,294 | INFO     | collected zombie processes
[2025-06-06 11:50:10] 2025-06-06 15:49:57,294 | INFO     | will attempt to kill all subprocesses of pid=1825166
[2025-06-06 11:50:10] 2025-06-06 15:49:57,668 | INFO     | process IDs to be killed: [1825166] (in reverse order)
[2025-06-06 11:50:10] 2025-06-06 15:49:57,759 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 11:50:10] 2025-06-06 15:49:57,759 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 11:50:10] 2025-06-06 15:49:57,773 | INFO     | did not find any defunct processes belonging to 1825166
[2025-06-06 11:50:10] 2025-06-06 15:49:57,785 | INFO     | did not find any defunct processes belonging to 1825166
[2025-06-06 11:50:10] 2025-06-06 15:49:57,786 | INFO     | ready for new job
[2025-06-06 11:50:10] 2025-06-06 15:49:57,786 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 11:50:10] 2025-06-06 15:49:57,788 | INFO     | **************************************
[2025-06-06 11:50:10] 2025-06-06 15:49:57,788 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 11:50:10] 2025-06-06 15:49:57,788 | INFO     | **************************************
[2025-06-06 11:50:10] 2025-06-06 15:49:57,788 | INFO     | 
[2025-06-06 11:50:10] 2025-06-06 15:49:57,804 | INFO     | architecture information:
[2025-06-06 11:50:10] 2025-06-06 15:49:57,823 | INFO     | executing command: cat /etc/os-release
[2025-06-06 11:50:10] 2025-06-06 15:49:57,949 | INFO     | cat /etc/os-release:
[2025-06-06 11:50:10] NAME="CentOS Linux"
[2025-06-06 11:50:10] VERSION="7 (Core)"
[2025-06-06 11:50:10] ID="centos"
[2025-06-06 11:50:10] ID_LIKE="rhel fedora"
[2025-06-06 11:50:10] VERSION_ID="7"
[2025-06-06 11:50:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 11:50:10] ANSI_COLOR="0;31"
[2025-06-06 11:50:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 11:50:10] HOME_URL="https://www.centos.org/"
[2025-06-06 11:50:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 11:50:10] 
[2025-06-06 11:50:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 11:50:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 11:50:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 11:50:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 11:50:10] 
[2025-06-06 11:50:10] 2025-06-06 15:49:57,957 | INFO     | **************************************
[2025-06-06 11:50:10] 2025-06-06 15:49:58,461 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-06 11:50:10] 2025-06-06 15:49:58,479 | INFO     | sufficient remaining disk space (53884223488 B)
[2025-06-06 11:50:10] 2025-06-06 15:49:58,480 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 11:50:10] 2025-06-06 15:49:58,480 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 11:50:10] 2025-06-06 15:49:58,480 | INFO     | update_server=False
[2025-06-06 11:50:10] 2025-06-06 15:49:58,480 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 11:50:10] 2025-06-06 15:49:58,481 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 11:50:10] 2025-06-06 15:49:58,812 | INFO     | all data control threads have been joined
[2025-06-06 11:50:10] 2025-06-06 15:49:58,939 | INFO     | all payload control threads have been joined
[2025-06-06 11:50:10] 2025-06-06 15:49:59,408 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 11:50:10] 2025-06-06 15:49:59,408 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 11:50:10] 2025-06-06 15:49:59,408 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 11:50:10] 2025-06-06 15:49:59,478 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 11:50:10] 2025-06-06 15:49:59,478 | INFO     | aborting loop
[2025-06-06 11:50:10] 2025-06-06 15:49:59,487 | INFO     | [job] retrieve thread has finished
[2025-06-06 11:50:10] 2025-06-06 15:49:59,502 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 11:50:10] 2025-06-06 15:49:59,632 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 11:50:10] 2025-06-06 15:49:59,810 | INFO     | [payload] validate_post thread has finished
[2025-06-06 11:50:10] 2025-06-06 15:49:59,818 | INFO     | [data] control thread has finished
[2025-06-06 11:50:10] 2025-06-06 15:49:59,867 | INFO     | [data] copytool_in thread has finished
[2025-06-06 11:50:10] 2025-06-06 15:49:59,869 | INFO     | [job] validate thread has finished
[2025-06-06 11:50:10] 2025-06-06 15:49:59,945 | INFO     | [payload] control thread has finished
[2025-06-06 11:50:10] 2025-06-06 15:50:00,032 | INFO     | all job control threads have been joined
[2025-06-06 11:50:10] 2025-06-06 15:50:00,411 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 11:50:10] 2025-06-06 15:50:00,484 | INFO     | [job] job monitor thread has finished
[2025-06-06 11:50:10] 2025-06-06 15:50:00,504 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 11:50:10] 2025-06-06 15:50:00,767 | INFO     | [payload] failed_post thread has finished
[2025-06-06 11:50:10] 2025-06-06 15:50:00,969 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 11:50:10] 2025-06-06 15:50:01,040 | INFO     | [job] control thread has finished
[2025-06-06 11:50:10] 2025-06-06 15:50:01,265 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 11:50:10] 2025-06-06 15:50:01,639 | INFO     | [data] copytool_out thread has finished
[2025-06-06 11:50:10] 2025-06-06 15:50:02,271 | INFO     | [job] queue monitor thread has finished
[2025-06-06 11:50:10] 2025-06-06 15:50:02,490 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 11:50:10] 2025-06-06 15:50:04,158 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140606472013632)>', '<ExcThread(monitor, started 140605543933696)>']
[2025-06-06 11:50:10] 2025-06-06 15:50:04,437 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 11:50:10] 2025-06-06 15:50:04,438 | INFO     | [monitor] control thread has ended
[2025-06-06 11:50:10] 2025-06-06 15:50:09,184 | INFO     | all workflow threads have been joined
[2025-06-06 11:50:10] 2025-06-06 15:50:09,184 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 11:50:10] 2025-06-06 15:50:09,184 | INFO     | traces error code: 0
[2025-06-06 11:50:10] 2025-06-06 15:50:09,184 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 11:50:10] 2025-06-06 15:50:09,533 [wrapper] ==== pilot stdout END ====
[2025-06-06 11:50:10] 2025-06-06 15:50:09,566 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 11:50:10] 2025-06-06 15:50:09,588 [wrapper] pilotpid: 1818173
[2025-06-06 11:50:10] 2025-06-06 15:50:09,615 [wrapper] Pilot exit status: 0
[2025-06-06 11:50:10] 2025-06-06 15:50:09,777 [wrapper] pandaids: 6677621011 6677621011 6677621011
[2025-06-06 11:50:10] 2025-06-06 15:50:09,836 [wrapper] cleanup supervisor_pilot 2290055 1818174
[2025-06-06 11:50:10] 2025-06-06 15:50:09,840 [wrapper] Test setup, not cleaning
[2025-06-06 11:50:10] 2025-06-06 15:50:09,843 [wrapper] apfmon messages muted
[2025-06-06 11:50:10] 2025-06-06 15:50:09,851 [wrapper] ==== wrapper stdout END ====
[2025-06-06 11:50:10] 2025-06-06 15:50:09,883 [wrapper] ==== wrapper stderr END ====
[2025-06-06 11:50:10]  *** Error codes and diagnostics ***
[2025-06-06 11:50:10]     "exeErrorCode": 0,
[2025-06-06 11:50:10]     "exeErrorDiag": "",
[2025-06-06 11:50:10]     "pilotErrorCode": 0,
[2025-06-06 11:50:10]     "pilotErrorDiag": "",
[2025-06-06 11:50:10]  *** Listing of results directory ***
[2025-06-06 11:50:10] total 600532
[2025-06-06 11:50:10] drwx------. 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-06-06 11:50:10] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 08:59 pilot3.tar.gz
[2025-06-06 11:50:10] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 09:08 queuedata.json
[2025-06-06 11:50:10] -rwx------. 1 boincer umatlas     37140 Jun  3 09:09 runpilot2-wrapper.sh
[2025-06-06 11:50:10] -rw-r--r--. 1 boincer umatlas       100 Jun  3 13:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 11:50:10] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 13:38 run_atlas
[2025-06-06 11:50:10] -rw-r--r--. 1 boincer umatlas       105 Jun  3 13:38 job.xml
[2025-06-06 11:50:10] -rw-r--r--. 3 boincer umatlas 214973674 Jun  3 13:38 EVNT.45006593._001340.pool.root.1
[2025-06-06 11:50:10] -rw-r--r--. 3 boincer umatlas 214973674 Jun  3 13:38 ATLAS.root_0
[2025-06-06 11:50:10] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:38 start_atlas.sh
[2025-06-06 11:50:10] -rw-r--r--. 2 boincer umatlas    508879 Jun  3 13:38 input.tar.gz
[2025-06-06 11:50:10] -rw-r--r--. 1 boincer umatlas         0 Jun  3 13:38 boinc_lockfile
[2025-06-06 11:50:10] -rw-------. 1 boincer umatlas         0 Jun  6 07:12 wrapper_sigint_1732808
[2025-06-06 11:50:10] -rw-------. 1 boincer umatlas         0 Jun  6 07:15 wrapper_sigkill_1732808
[2025-06-06 11:50:10] drwxrwx--x. 2 boincer umatlas      4096 Jun  6 07:15 shared
[2025-06-06 11:50:10] -rw-r--r--. 1 boincer umatlas      2525 Jun  6 07:30 pandaJob.out
[2025-06-06 11:50:10] -rw-------. 1 boincer umatlas    985732 Jun  6 07:31 agis_schedconf.cvmfs.json
[2025-06-06 11:50:10] -rw-r--r--. 1 boincer umatlas      6524 Jun  6 11:47 init_data.xml
[2025-06-06 11:50:10] -rw-------. 1 boincer umatlas 177757024 Jun  6 11:48 HITS.45006595._033305.pool.root.1
[2025-06-06 11:50:10] -rw-r--r--. 1 boincer umatlas       533 Jun  6 11:48 boinc_task_state.xml
[2025-06-06 11:50:10] -rw-------. 1 boincer umatlas      1049 Jun  6 11:49 memory_monitor_summary.json
[2025-06-06 11:50:10] -rw-------. 1 boincer umatlas   1598969 Jun  6 11:49 agis_ddmendpoints.agis.ALL.json
[2025-06-06 11:50:10] -rw-------. 1 boincer umatlas    434203 Jun  6 11:49 log.45006595._033305.job.log.tgz.1
[2025-06-06 11:50:10] -rw-------. 1 boincer umatlas        99 Jun  6 11:49 pilot_heartbeat.json
[2025-06-06 11:50:10] -rw-r--r--. 1 boincer umatlas      8192 Jun  6 11:49 boinc_mmap_file
[2025-06-06 11:50:10] -rw-r--r--. 1 boincer umatlas        29 Jun  6 11:49 wrapper_checkpoint.txt
[2025-06-06 11:50:10] -rw-------. 1 boincer umatlas      7734 Jun  6 11:49 heartbeat.json
[2025-06-06 11:50:10] -rw-------. 1 boincer umatlas      4353 Jun  6 11:50 pilotlog.txt
[2025-06-06 11:50:10] -rw-------. 1 boincer umatlas   1258713 Jun  6 11:50 log.45006595._033305.job.log.1
[2025-06-06 11:50:10] -rw-------. 1 boincer umatlas       357 Jun  6 11:50 output.list
[2025-06-06 11:50:10] -rw-r--r--. 1 boincer umatlas       620 Jun  6 11:50 runtime_log
[2025-06-06 11:50:10] -rw-r--r--. 2 boincer umatlas   1710080 Jun  6 11:50 result.tar.gz
[2025-06-06 11:50:10] -rw-------. 1 boincer umatlas      1887 Jun  6 11:50 xEwKDmDZgg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJGkKDmDISsJm.diag
[2025-06-06 11:50:10] -rw-r--r--. 1 boincer umatlas      8742 Jun  6 11:50 runtime_log.err
[2025-06-06 11:50:10] -rw-r--r--. 1 boincer umatlas     38260 Jun  6 11:50 stderr.txt
[2025-06-06 11:50:10] HITS file was successfully produced:
[2025-06-06 11:50:10] -rw-------. 1 boincer umatlas 177757024 Jun  6 11:48 shared/HITS.pool.root.1
[2025-06-06 11:50:10]  *** Contents of shared directory: ***
[2025-06-06 11:50:10] total 385724
[2025-06-06 11:50:10] -rw-r--r--. 3 boincer umatlas 214973674 Jun  3 13:38 ATLAS.root_0
[2025-06-06 11:50:10] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:38 start_atlas.sh
[2025-06-06 11:50:10] -rw-r--r--. 2 boincer umatlas    508879 Jun  3 13:38 input.tar.gz
[2025-06-06 11:50:10] -rw-------. 1 boincer umatlas 177757024 Jun  6 11:48 HITS.pool.root.1
[2025-06-06 11:50:10] -rw-r--r--. 2 boincer umatlas   1710080 Jun  6 11:50 result.tar.gz
11:50:12 (1814553): run_atlas exited; CPU time 69318.621606
11:50:12 (1814553): called boinc_finish(0)

</stderr_txt>
]]>


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