Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:32:47 (584837): wrapper (7.7.26015): starting
13:32:47 (584837): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 13:32:47] Arguments: --nthreads 8
[2025-06-03 13:32:47] Threads: 8
[2025-06-03 13:32:47] Checking for CVMFS
[2025-06-03 13:32:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:32:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:32:47] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:32:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:32:47] 2.12.6.0 1132017 119366 238604 146750 0 179 30122693 32935937 3664 130560 2 385411095 99.633 393566104 23144 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 13:32:47] CVMFS is ok
[2025-06-03 13:32:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 13:32:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 13:32:47] Further information can be found at the LHC@home message board.
[2025-06-03 13:32:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:32:47] Checking for apptainer binary...
[2025-06-03 13:32:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:32:47] Running /usr/bin/apptainer --version
[2025-06-03 13:32:47] apptainer version 1.4.1-1.el9
[2025-06-03 13:32:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:32:48] c-5-5.aglt2.org
[2025-06-03 13:32:48] apptainer works
[2025-06-03 13:32:48] Set ATHENA_PROC_NUMBER=8
[2025-06-03 13:32:48] Set ATHENA_CORE_NUMBER=8
[2025-06-03 13:32:48] Starting ATLAS job with PandaID=6677675847
[2025-06-03 13:32:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 18:25:01]  *** The last 200 lines of the pilot log: ***
[2025-06-03 18:25:01] 2025-06-03 21:19:34,685 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 18:25:01] 2025-06-03 21:19:34,686 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677675847/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 18:25:01] 2025-06-03 21:19:34,687 | INFO     | extracted standard info from prmon json
[2025-06-03 18:25:01] 2025-06-03 21:19:34,687 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 18:25:01] 2025-06-03 21:19:34,687 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 18:25:01] 2025-06-03 21:19:34,688 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 18:25:01] 2025-06-03 21:19:34,688 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 18:25:01] 2025-06-03 21:19:34,781 | INFO     | fitting pss+swap vs Time
[2025-06-03 18:25:01] 2025-06-03 21:19:34,782 | INFO     | sum of square deviations: 3392634920.6351237
[2025-06-03 18:25:01] 2025-06-03 21:19:34,784 | INFO     | sum of deviations: 43329512808.25676
[2025-06-03 18:25:01] 2025-06-03 21:19:34,784 | INFO     | mean x: 1748978743.9594595
[2025-06-03 18:25:01] 2025-06-03 21:19:34,784 | INFO     | mean y: 2104510.1396396398
[2025-06-03 18:25:01] 2025-06-03 21:19:34,784 | INFO     | -- intersect: -22335222865.354465
[2025-06-03 18:25:01] 2025-06-03 21:19:34,784 | INFO     | intersect: -22335222865.354465
[2025-06-03 18:25:01] 2025-06-03 21:19:34,785 | INFO     | chi2: 4.285021251697986
[2025-06-03 18:25:01] 2025-06-03 21:19:34,785 | INFO     | sum of square deviations: 3168559502.055295
[2025-06-03 18:25:01] 2025-06-03 21:19:34,791 | INFO     | sum of deviations: 55260042995.46543
[2025-06-03 18:25:01] 2025-06-03 21:19:34,791 | INFO     | mean x: 1748978591.470046
[2025-06-03 18:25:01] 2025-06-03 21:19:34,791 | INFO     | mean y: 2112480.456221198
[2025-06-03 18:25:01] 2025-06-03 21:19:34,791 | INFO     | -- intersect: -30500275781.49433
[2025-06-03 18:25:01] 2025-06-03 21:19:34,791 | INFO     | intersect: -30500275781.49433
[2025-06-03 18:25:01] 2025-06-03 21:19:34,792 | INFO     | chi2: 3.624046585739555
[2025-06-03 18:25:01] 2025-06-03 21:19:34,792 | INFO     | current chi2=3.624046585739555 (change=15.425236588885365 %)
[2025-06-03 18:25:01] 2025-06-03 21:19:34,792 | INFO     | right removable region: 216
[2025-06-03 18:25:01] 2025-06-03 21:19:34,792 | INFO     | sum of square deviations: 3168497282.055295
[2025-06-03 18:25:01] 2025-06-03 21:19:34,794 | INFO     | sum of deviations: -3041463280.2580633
[2025-06-03 18:25:01] 2025-06-03 21:19:34,794 | INFO     | mean x: 1748978896.470046
[2025-06-03 18:25:01] 2025-06-03 21:19:34,794 | INFO     | mean y: 2135973.806451613
[2025-06-03 18:25:01] 2025-06-03 21:19:34,794 | INFO     | -- intersect: 1680993368.3469217
[2025-06-03 18:25:01] 2025-06-03 21:19:34,794 | INFO     | intersect: 1680993368.3469217
[2025-06-03 18:25:01] 2025-06-03 21:19:34,795 | INFO     | chi2: 1.8330163444391876
[2025-06-03 18:25:01] 2025-06-03 21:19:34,795 | INFO     | current chi2=1.8330163444391876 (change=57.22270120100723 %)
[2025-06-03 18:25:01] 2025-06-03 21:19:34,799 | INFO     | sum of square deviations: 2954452855.924526
[2025-06-03 18:25:01] 2025-06-03 21:19:34,801 | INFO     | sum of deviations: -32530603673.792442
[2025-06-03 18:25:01] 2025-06-03 21:19:34,813 | INFO     | mean x: 1748979048.981132
[2025-06-03 18:25:01] 2025-06-03 21:19:34,813 | INFO     | mean y: 2156936.3018867923
[2025-06-03 18:25:01] 2025-06-03 21:19:34,813 | INFO     | -- intersect: 19259646241.66688
[2025-06-03 18:25:01] 2025-06-03 21:19:34,813 | INFO     | intersect: 19259646241.66688
[2025-06-03 18:25:01] 2025-06-03 21:19:34,814 | INFO     | chi2: 0.845831541831456
[2025-06-03 18:25:01] 2025-06-03 21:19:34,814 | INFO     | current chi2=0.845831541831456 (change=53.85575560210083 %)
[2025-06-03 18:25:01] 2025-06-03 21:19:34,814 | INFO     | sum of square deviations: 2750269079.739119
[2025-06-03 18:25:01] 2025-06-03 21:19:34,816 | INFO     | sum of deviations: -31701240183.333336
[2025-06-03 18:25:01] 2025-06-03 21:19:34,816 | INFO     | mean x: 1748979201.4927535
[2025-06-03 18:25:01] 2025-06-03 21:19:34,816 | INFO     | mean y: 2156279.777777778
[2025-06-03 18:25:01] 2025-06-03 21:19:34,816 | INFO     | -- intersect: 20161932699.7038
[2025-06-03 18:25:01] 2025-06-03 21:19:34,816 | INFO     | intersect: 20161932699.7038
[2025-06-03 18:25:01] 2025-06-03 21:19:34,817 | INFO     | chi2: 0.8210603784656434
[2025-06-03 18:25:01] 2025-06-03 21:19:34,830 | INFO     | current chi2=0.8210603784656434 (change=2.9286166500927973 %)
[2025-06-03 18:25:01] 2025-06-03 21:19:34,830 | INFO     | left removable region: 30
[2025-06-03 18:25:01] 2025-06-03 21:19:34,831 | INFO     | sum of square deviations: 1995201710.5645106
[2025-06-03 18:25:01] 2025-06-03 21:19:34,836 | INFO     | sum of deviations: -5119045857.935484
[2025-06-03 18:25:01] 2025-06-03 21:19:34,836 | INFO     | mean x: 1748979476.048387
[2025-06-03 18:25:01] 2025-06-03 21:19:34,836 | INFO     | mean y: 2153682.2150537632
[2025-06-03 18:25:01] 2025-06-03 21:19:34,836 | INFO     | -- intersect: 4489472480.646982
[2025-06-03 18:25:01] 2025-06-03 21:19:34,836 | INFO     | intersect: 4489472480.646982
[2025-06-03 18:25:01] 2025-06-03 21:19:34,837 | INFO     | chi2: 0.07577749152163282
[2025-06-03 18:25:01] 2025-06-03 21:19:34,837 | INFO     | -- intersect: 4489472480.646982
[2025-06-03 18:25:01] 2025-06-03 21:19:34,837 | INFO     | current memory leak: -2.57 B/s (using 186 data points, chi2=0.08)
[2025-06-03 18:25:01] 2025-06-03 21:19:34,838 | INFO     | ..............................
[2025-06-03 18:25:01] 2025-06-03 21:19:34,838 | INFO     | . Timing measurements:
[2025-06-03 18:25:01] 2025-06-03 21:19:34,838 | INFO     | . get job = 0 s
[2025-06-03 18:25:01] 2025-06-03 21:19:34,838 | INFO     | . initial setup = 2 s
[2025-06-03 18:25:01] 2025-06-03 21:19:34,838 | INFO     | . payload setup = 6 s
[2025-06-03 18:25:01] 2025-06-03 21:19:34,839 | INFO     | . stage-in = 0 s
[2025-06-03 18:25:01] 2025-06-03 21:19:34,839 | INFO     | . payload execution = 13529 s
[2025-06-03 18:25:01] 2025-06-03 21:19:34,839 | INFO     | . stage-out = 6 s
[2025-06-03 18:25:01] 2025-06-03 21:19:34,839 | INFO     | . log creation = 0 s
[2025-06-03 18:25:01] 2025-06-03 21:19:34,839 | INFO     | ..............................
[2025-06-03 18:25:01] 2025-06-03 21:19:35,468 | INFO     | 
[2025-06-03 18:25:01] 2025-06-03 21:19:35,469 | INFO     | job summary report
[2025-06-03 18:25:01] 2025-06-03 21:19:35,469 | INFO     | --------------------------------------------------
[2025-06-03 18:25:01] 2025-06-03 21:19:35,469 | INFO     | PanDA job id: 6677675847
[2025-06-03 18:25:01] 2025-06-03 21:19:35,469 | INFO     | task id: 45006595
[2025-06-03 18:25:01] 2025-06-03 21:19:35,469 | INFO     | errors: (none)
[2025-06-03 18:25:01] 2025-06-03 21:19:35,469 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 18:25:01] 2025-06-03 21:19:35,469 | INFO     | pilot state: finished 
[2025-06-03 18:25:01] 2025-06-03 21:19:35,469 | INFO     | transexitcode: 0
[2025-06-03 18:25:01] 2025-06-03 21:19:35,470 | INFO     | exeerrorcode: 0
[2025-06-03 18:25:01] 2025-06-03 21:19:35,470 | INFO     | exeerrordiag: 
[2025-06-03 18:25:01] 2025-06-03 21:19:35,470 | INFO     | exitcode: 0
[2025-06-03 18:25:01] 2025-06-03 21:19:35,470 | INFO     | exitmsg: OK
[2025-06-03 18:25:01] 2025-06-03 21:19:35,470 | INFO     | cpuconsumptiontime: 43047 s
[2025-06-03 18:25:01] 2025-06-03 21:19:35,470 | INFO     | nevents: 400
[2025-06-03 18:25:01] 2025-06-03 21:19:35,470 | INFO     | neventsw: 0
[2025-06-03 18:25:01] 2025-06-03 21:19:35,470 | INFO     | pid: 595466
[2025-06-03 18:25:01] 2025-06-03 21:19:35,470 | INFO     | pgrp: 595466
[2025-06-03 18:25:01] 2025-06-03 21:19:35,471 | INFO     | corecount: 8
[2025-06-03 18:25:01] 2025-06-03 21:19:35,471 | INFO     | event service: False
[2025-06-03 18:25:01] 2025-06-03 21:19:35,471 | INFO     | sizes: {0: 2405013, 1: 2405212, 4: 2405418, 11: 2405446, 13539: 2435446, 13540: 2435445, 13548: 2444570, 13549: 2444626, 13582: 2444796}
[2025-06-03 18:25:01] 2025-06-03 21:19:35,471 | INFO     | --------------------------------------------------
[2025-06-03 18:25:01] 2025-06-03 21:19:35,471 | INFO     | 
[2025-06-03 18:25:01] 2025-06-03 21:19:35,471 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 18:25:01] 2025-06-03 21:19:35,520 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 18:25:01] 2025-06-03 21:19:35,521 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 18:25:01] 2025-06-03 21:19:35,521 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 18:25:01] 2025-06-03 21:19:35,521 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 18:25:01] 2025-06-03 21:19:35,521 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 18:25:01] 2025-06-03 21:19:35,521 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 18:25:01] 2025-06-03 21:19:35,522 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 18:25:01] 2025-06-03 21:19:35,522 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 18:25:01] 2025-06-03 21:19:35,522 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 18:25:01] 2025-06-03 21:19:35,522 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 18:25:01] 2025-06-03 21:19:35,522 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 18:25:01] 2025-06-03 21:19:35,522 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 18:25:01] 2025-06-03 21:19:35,522 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 18:25:01] 2025-06-03 21:19:35,522 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 18:25:01] 2025-06-03 21:19:35,522 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 18:25:01] 2025-06-03 21:19:35,523 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 18:25:01] 2025-06-03 21:19:35,523 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 18:25:01] 2025-06-03 21:19:35,523 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 18:25:01] 2025-06-03 21:19:35,523 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 18:25:01] 2025-06-03 21:19:35,523 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 18:25:01] 2025-06-03 21:19:35,523 | INFO     | job 6677675847 has completed (purged errors)
[2025-06-03 18:25:01] 2025-06-03 21:19:35,524 | INFO     | overall cleanup function is called
[2025-06-03 18:25:01] 2025-06-03 21:19:36,537 | INFO     | --- collectZombieJob: --- 10, [595466]
[2025-06-03 18:25:01] 2025-06-03 21:19:36,537 | INFO     | zombie collector waiting for pid 595466
[2025-06-03 18:25:01] 2025-06-03 21:19:36,537 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 18:25:01] 2025-06-03 21:19:36,538 | INFO     | collected zombie processes
[2025-06-03 18:25:01] 2025-06-03 21:19:36,538 | INFO     | will attempt to kill all subprocesses of pid=595466
[2025-06-03 18:25:01] 2025-06-03 21:19:38,162 | INFO     | process IDs to be killed: [595466] (in reverse order)
[2025-06-03 18:25:01] 2025-06-03 21:19:38,393 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 18:25:01] 2025-06-03 21:19:38,393 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 18:25:01] 2025-06-03 21:19:38,413 | INFO     | did not find any defunct processes belonging to 595466
[2025-06-03 18:25:01] 2025-06-03 21:19:38,429 | INFO     | did not find any defunct processes belonging to 595466
[2025-06-03 18:25:01] 2025-06-03 21:19:38,429 | INFO     | ready for new job
[2025-06-03 18:25:01] 2025-06-03 21:19:38,429 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 18:25:01] 2025-06-03 21:19:38,431 | INFO     | **************************************
[2025-06-03 18:25:01] 2025-06-03 21:19:38,431 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 18:25:01] 2025-06-03 21:19:38,432 | INFO     | **************************************
[2025-06-03 18:25:01] 2025-06-03 21:19:38,432 | INFO     | 
[2025-06-03 18:25:01] 2025-06-03 21:19:38,448 | INFO     | architecture information:
[2025-06-03 18:25:01] 2025-06-03 21:19:38,467 | INFO     | executing command: cat /etc/os-release
[2025-06-03 18:25:01] 2025-06-03 21:19:38,613 | INFO     | cat /etc/os-release:
[2025-06-03 18:25:01] NAME="CentOS Linux"
[2025-06-03 18:25:01] VERSION="7 (Core)"
[2025-06-03 18:25:01] ID="centos"
[2025-06-03 18:25:01] ID_LIKE="rhel fedora"
[2025-06-03 18:25:01] VERSION_ID="7"
[2025-06-03 18:25:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 18:25:01] ANSI_COLOR="0;31"
[2025-06-03 18:25:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 18:25:01] HOME_URL="https://www.centos.org/"
[2025-06-03 18:25:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 18:25:01] 
[2025-06-03 18:25:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 18:25:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 18:25:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 18:25:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 18:25:01] 
[2025-06-03 18:25:01] 2025-06-03 21:19:38,613 | INFO     | **************************************
[2025-06-03 18:25:01] 2025-06-03 21:19:39,121 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 18:25:01] 2025-06-03 21:19:39,180 | INFO     | sufficient remaining disk space (74228695040 B)
[2025-06-03 18:25:01] 2025-06-03 21:19:39,181 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 18:25:01] 2025-06-03 21:19:39,181 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 18:25:01] 2025-06-03 21:19:39,181 | INFO     | update_server=False
[2025-06-03 18:25:01] 2025-06-03 21:19:39,181 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 18:25:01] 2025-06-03 21:19:39,247 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:25:01] 2025-06-03 21:19:39,247 | INFO     | aborting loop
[2025-06-03 18:25:01] 2025-06-03 21:19:39,265 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 18:25:01] 2025-06-03 21:19:39,437 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 18:25:01] 2025-06-03 21:19:39,437 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 18:25:01] 2025-06-03 21:19:39,438 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 18:25:01] 2025-06-03 21:19:39,503 | INFO     | all data control threads have been joined
[2025-06-03 18:25:01] 2025-06-03 21:19:39,991 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 18:25:01] 2025-06-03 21:19:40,187 | INFO     | [job] retrieve thread has finished
[2025-06-03 18:25:01] 2025-06-03 21:19:40,237 | INFO     | [payload] failed_post thread has finished
[2025-06-03 18:25:01] 2025-06-03 21:19:40,253 | INFO     | [job] job monitor thread has finished
[2025-06-03 18:25:01] 2025-06-03 21:19:40,463 | INFO     | all payload control threads have been joined
[2025-06-03 18:25:01] 2025-06-03 21:19:40,494 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:25:01] 2025-06-03 21:19:40,508 | INFO     | [data] control thread has finished
[2025-06-03 18:25:01] 2025-06-03 21:19:40,655 | INFO     | all job control threads have been joined
[2025-06-03 18:25:01] 2025-06-03 21:19:40,904 | INFO     | [job] validate thread has finished
[2025-06-03 18:25:01] 2025-06-03 21:19:40,912 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 18:25:01] 2025-06-03 21:19:40,947 | INFO     | [payload] validate_post thread has finished
[2025-06-03 18:25:01] 2025-06-03 21:19:40,988 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 18:25:01] 2025-06-03 21:19:41,035 | INFO     | [data] copytool_in thread has finished
[2025-06-03 18:25:01] 2025-06-03 21:19:41,272 | INFO     | [data] copytool_out thread has finished
[2025-06-03 18:25:01] 2025-06-03 21:19:41,469 | INFO     | [payload] control thread has finished
[2025-06-03 18:25:01] 2025-06-03 21:19:41,499 | INFO     | [job] queue monitor thread has finished
[2025-06-03 18:25:01] 2025-06-03 21:19:41,597 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 18:25:01] 2025-06-03 21:19:41,656 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 18:25:01] 2025-06-03 21:19:41,660 | INFO     | [job] control thread has finished
[2025-06-03 18:25:01] 2025-06-03 21:19:44,011 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 18:25:01] 2025-06-03 21:19:45,645 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139911760566080)>', '<ExcThread(monitor, started 139910883297024)>']
[2025-06-03 18:25:01] 2025-06-03 21:19:46,490 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 18:25:01] 2025-06-03 21:19:46,490 | INFO     | [monitor] control thread has ended
[2025-06-03 18:25:01] 2025-06-03 21:19:50,675 | INFO     | all workflow threads have been joined
[2025-06-03 18:25:01] 2025-06-03 21:19:50,675 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 18:25:01] 2025-06-03 21:19:50,676 | INFO     | traces error code: 0
[2025-06-03 18:25:01] 2025-06-03 21:19:50,677 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 18:25:01] 2025-06-03 21:19:51,938 [wrapper] ==== pilot stdout END ====
[2025-06-03 18:25:01] 2025-06-03 21:19:52,030 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 18:25:01] 2025-06-03 21:19:52,076 [wrapper] pilotpid: 588844
[2025-06-03 18:25:01] 2025-06-03 21:19:52,143 [wrapper] Pilot exit status: 0
[2025-06-03 18:25:01] 2025-06-03 21:19:52,361 [wrapper] pandaids: 6677675847
[2025-06-03 18:25:01] 2025-06-03 21:19:52,667 [wrapper] cleanup supervisor_pilot 2773944 588845
[2025-06-03 18:25:01] 2025-06-03 21:19:52,711 [wrapper] Test setup, not cleaning
[2025-06-03 18:25:01] 2025-06-03 21:19:52,729 [wrapper] apfmon messages muted
[2025-06-03 18:25:01] 2025-06-03 21:19:52,759 [wrapper] ==== wrapper stdout END ====
[2025-06-03 18:25:01] 2025-06-03 21:19:52,821 [wrapper] ==== wrapper stderr END ====
[2025-06-03 18:25:01]  *** Error codes and diagnostics ***
[2025-06-03 18:25:01]     "exeErrorCode": 0,
[2025-06-03 18:25:01]     "exeErrorDiag": "",
[2025-06-03 18:25:01]     "pilotErrorCode": 0,
[2025-06-03 18:25:01]     "pilotErrorDiag": "",
[2025-06-03 18:25:01]  *** Listing of results directory ***
[2025-06-03 18:25:01] total 390020
[2025-06-03 18:25:01] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 10:52 pilot3.tar.gz
[2025-06-03 18:25:01] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 10:56 queuedata.json
[2025-06-03 18:25:01] -rwx------. 1 boincer umatlas     37140 Jun  3 10:56 runpilot2-wrapper.sh
[2025-06-03 18:25:01] -rw-r--r--. 1 boincer umatlas       100 Jun  3 13:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 18:25:01] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 13:32 run_atlas
[2025-06-03 18:25:01] -rw-r--r--. 1 boincer umatlas       105 Jun  3 13:32 job.xml
[2025-06-03 18:25:01] -rw-r--r--. 2 boincer umatlas 212637074 Jun  3 13:32 EVNT.45006593._001452.pool.root.1
[2025-06-03 18:25:01] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:32 start_atlas.sh
[2025-06-03 18:25:01] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 13:32 shared
[2025-06-03 18:25:01] -rw-r--r--. 2 boincer umatlas    508876 Jun  3 13:32 input.tar.gz
[2025-06-03 18:25:01] -rw-r--r--. 1 boincer umatlas         0 Jun  3 13:32 boinc_lockfile
[2025-06-03 18:25:01] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 13:32 pandaJob.out
[2025-06-03 18:25:01] -rw-------. 1 boincer umatlas    985078 Jun  3 13:32 agis_schedconf.cvmfs.json
[2025-06-03 18:25:01] drwx------. 4 boincer umatlas      4096 Jun  3 13:32 pilot3
[2025-06-03 18:25:01] -rw-------. 1 boincer umatlas 179890454 Jun  3 17:17 HITS.45006595._036147.pool.root.1
[2025-06-03 18:25:01] -rw-r--r--. 1 boincer umatlas       529 Jun  3 17:17 boinc_task_state.xml
[2025-06-03 18:25:01] -rw-------. 1 boincer umatlas      1050 Jun  3 17:18 memory_monitor_summary.json
[2025-06-03 18:25:01] -rw-------. 1 boincer umatlas   1603667 Jun  3 17:18 agis_ddmendpoints.agis.ALL.json
[2025-06-03 18:25:01] -rw-------. 1 boincer umatlas        95 Jun  3 17:18 pilot_heartbeat.json
[2025-06-03 18:25:01] -rw-------. 1 boincer umatlas    398309 Jun  3 17:18 log.45006595._036147.job.log.tgz.1
[2025-06-03 18:25:01] -rw-------. 1 boincer umatlas      7736 Jun  3 17:19 heartbeat.json
[2025-06-03 18:25:01] -rw-------. 1 boincer umatlas      4353 Jun  3 17:19 pilotlog.txt
[2025-06-03 18:25:01] -rw-------. 1 boincer umatlas   1108166 Jun  3 17:19 log.45006595._036147.job.log.1
[2025-06-03 18:25:01] -rw-------. 1 boincer umatlas       357 Jun  3 17:19 output.list
[2025-06-03 18:25:01] -rw-r--r--. 1 boincer umatlas       620 Jun  3 17:19 runtime_log
[2025-06-03 18:25:01] -rw-------. 1 boincer umatlas   1525760 Jun  3 17:19 result.tar.gz
[2025-06-03 18:25:01] -rw-r--r--. 1 boincer umatlas      8645 Jun  3 17:19 runtime_log.err
[2025-06-03 18:25:01] -rw-------. 1 boincer umatlas       656 Jun  3 17:19 Qy1LDm1Eig7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfgkKDmTpMu0n.diag
[2025-06-03 18:25:01] -rw-r--r--. 1 boincer umatlas      6672 Jun  3 18:20 init_data.xml
[2025-06-03 18:25:01] -rw-r--r--. 1 boincer umatlas        27 Jun  3 18:24 wrapper_checkpoint.txt
[2025-06-03 18:25:01] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 18:25 boinc_mmap_file
[2025-06-03 18:25:01] -rw-r--r--. 1 boincer umatlas     20893 Jun  3 18:25 stderr.txt
[2025-06-03 18:25:01] HITS file was successfully produced:
[2025-06-03 18:25:01] -rw-------. 1 boincer umatlas 179890454 Jun  3 17:17 shared/HITS.pool.root.1
[2025-06-03 18:25:01]  *** Contents of shared directory: ***
[2025-06-03 18:25:01] total 385348
[2025-06-03 18:25:01] -rw-r--r--. 2 boincer umatlas 212637074 Jun  3 13:32 ATLAS.root_0
[2025-06-03 18:25:01] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:32 start_atlas.sh
[2025-06-03 18:25:01] -rw-r--r--. 2 boincer umatlas    508876 Jun  3 13:32 input.tar.gz
[2025-06-03 18:25:01] -rw-------. 1 boincer umatlas 179890454 Jun  3 17:17 HITS.pool.root.1
[2025-06-03 18:25:01] -rw-------. 1 boincer umatlas   1525760 Jun  3 17:19 result.tar.gz
18:25:03 (584837): run_atlas exited; CPU time 43566.838274
18:25:03 (584837): called boinc_finish(0)

</stderr_txt>
]]>

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