Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:33:44 (2985106): wrapper (7.7.26015): starting
13:33:44 (2985106): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 13:33:44] Arguments: --nthreads 8
[2025-06-03 13:33:44] Threads: 8
[2025-06-03 13:33:44] Checking for CVMFS
[2025-06-03 13:33:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:33:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:33:44] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:33:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:33:44] 2.12.6.0 4122838 22153 428040 146750 1 197 22556992 32935937 4998 16776704 0 61877612 99.625 74454731 33516 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 13:33:44] CVMFS is ok
[2025-06-03 13:33:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 13:33:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 13:33:44] Further information can be found at the LHC@home message board.
[2025-06-03 13:33:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:33:44] Checking for apptainer binary...
[2025-06-03 13:33:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:33:44] Running /usr/bin/apptainer --version
[2025-06-03 13:33:44] apptainer version 1.4.1-1.el9
[2025-06-03 13:33:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:33:44] c6-6-39-3.aglt2.org
[2025-06-03 13:33:44] apptainer works
[2025-06-03 13:33:44] Set ATHENA_PROC_NUMBER=8
[2025-06-03 13:33:44] Set ATHENA_CORE_NUMBER=8
[2025-06-03 13:33:44] Starting ATLAS job with PandaID=6677675706
[2025-06-03 13:33:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 14:42:57]  *** The last 200 lines of the pilot log: ***
[2025-06-03 14:42:57]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 14:42:57]  is_altstaged=None
[2025-06-03 14:42:57]  is_tar=False
[2025-06-03 14:42:57]  lfn=log.45006595._036006.job.log.tgz.1
[2025-06-03 14:42:57]  mtime=0
[2025-06-03 14:42:57]  protocol_id=None
[2025-06-03 14:42:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 14:42:57]  replicas=None
[2025-06-03 14:42:57]  scope=mc23_13p6TeV
[2025-06-03 14:42:57]  status=None
[2025-06-03 14:42:57]  status_code=0
[2025-06-03 14:42:57]  storage_token=
[2025-06-03 14:42:57]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6677675706/log.45006595._036006.job.log.tgz.1
[2025-06-03 14:42:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/70/51/log.45006595._036006.job.log.tgz.1
[2025-06-03 14:42:57]  workdir=None
[2025-06-03 14:42:57] ]
[2025-06-03 14:42:57] 2025-06-03 18:42:30,392 | INFO     | transferring file log.45006595._036006.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6677675706/log.45006595._036006.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 14:42:57] 2025-06-03 18:42:30,392 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6677675706/log.45006595._036006.job.log.tgz.1 /tmp/boinchome/slots/3/log.45006595._036006.job
[2025-06-03 14:42:57] 2025-06-03 18:42:30,410 | INFO     | adding to output.list: log.45006595._036006.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/70/51/log.45006595._036006.job.log.tg
[2025-06-03 14:42:57] 2025-06-03 18:42:30,411 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 14:42:57] 2025-06-03 18:42:30,411 | INFO     | summary of transferred files:
[2025-06-03 14:42:57] 2025-06-03 18:42:30,411 | INFO     |  -- lfn=log.45006595._036006.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 14:42:57] 2025-06-03 18:42:30,411 | INFO     | stage-out finished correctly
[2025-06-03 14:42:57] 2025-06-03 18:42:31,497 | INFO     | monitor loop #310: job 0:6677675706 is in state 'finished'
[2025-06-03 14:42:57] 2025-06-03 18:42:31,498 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 14:42:57] 2025-06-03 18:42:32,272 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 14:42:57] 2025-06-03 18:42:34,000 | INFO     | monitor loop #311: job 0:6677675706 is in state 'finished'
[2025-06-03 14:42:57] 2025-06-03 18:42:34,001 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 14:42:57] 2025-06-03 18:42:34,164 | INFO     | job 6677675706 has state=finished
[2025-06-03 14:42:57] 2025-06-03 18:42:34,165 | INFO     | preparing for final server update for job 6677675706 in state='finished'
[2025-06-03 14:42:57] 2025-06-03 18:42:34,165 | INFO     | this job has now completed (state=finished)
[2025-06-03 14:42:57] 2025-06-03 18:42:34,165 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 14:42:57] 2025-06-03 18:42:34,165 | INFO     | log transfer has been attempted: DONE
[2025-06-03 14:42:57] 2025-06-03 18:42:34,165 | INFO     | job 6677675706 has finished - writing final server update
[2025-06-03 14:42:57] 2025-06-03 18:42:34,166 | INFO     | total number of processed events: 400 (read)
[2025-06-03 14:42:57] 2025-06-03 18:42:34,180 | INFO     | executing command: lscpu
[2025-06-03 14:42:57] 2025-06-03 18:42:34,241 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 14:42:57] 2025-06-03 18:42:36,503 | INFO     | monitor loop #312: job 0:6677675706 is in state 'finished'
[2025-06-03 14:42:57] 2025-06-03 18:42:36,504 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 14:42:57] 2025-06-03 18:42:37,800 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 14:42:57] 2025-06-03 18:42:37,800 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6677675706/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 14:42:57] 2025-06-03 18:42:37,801 | INFO     | extracted standard info from prmon json
[2025-06-03 14:42:57] 2025-06-03 18:42:37,801 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 14:42:57] 2025-06-03 18:42:37,802 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 14:42:57] 2025-06-03 18:42:37,802 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 14:42:57] 2025-06-03 18:42:37,802 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 14:42:57] 2025-06-03 18:42:37,804 | INFO     | fitting pss+swap vs Time
[2025-06-03 14:42:57] 2025-06-03 18:42:37,804 | INFO     | sum of square deviations: 66959395.0
[2025-06-03 14:42:57] 2025-06-03 18:42:37,805 | INFO     | sum of deviations: 6702940104.0
[2025-06-03 14:42:57] 2025-06-03 18:42:37,805 | INFO     | mean x: 1748974163.5
[2025-06-03 14:42:57] 2025-06-03 18:42:37,805 | INFO     | mean y: 2105226.3333333335
[2025-06-03 14:42:57] 2025-06-03 18:42:37,805 | INFO     | -- intersect: -175078166352.94247
[2025-06-03 14:42:57] 2025-06-03 18:42:37,805 | INFO     | intersect: -175078166352.94247
[2025-06-03 14:42:57] 2025-06-03 18:42:37,805 | INFO     | chi2: 0.8948657339737744
[2025-06-03 14:42:57] 2025-06-03 18:42:37,805 | INFO     | -- intersect: -175078166352.94247
[2025-06-03 14:42:57] 2025-06-03 18:42:37,805 | INFO     | current memory leak: 100.10 B/s (using 60 data points, chi2=0.89)
[2025-06-03 14:42:57] 2025-06-03 18:42:37,806 | INFO     | ..............................
[2025-06-03 14:42:57] 2025-06-03 18:42:37,806 | INFO     | . Timing measurements:
[2025-06-03 14:42:57] 2025-06-03 18:42:37,806 | INFO     | . get job = 0 s
[2025-06-03 14:42:57] 2025-06-03 18:42:37,806 | INFO     | . initial setup = 2 s
[2025-06-03 14:42:57] 2025-06-03 18:42:37,806 | INFO     | . payload setup = 6 s
[2025-06-03 14:42:57] 2025-06-03 18:42:37,806 | INFO     | . stage-in = 0 s
[2025-06-03 14:42:57] 2025-06-03 18:42:37,806 | INFO     | . payload execution = 4090 s
[2025-06-03 14:42:57] 2025-06-03 18:42:37,806 | INFO     | . stage-out = 0 s
[2025-06-03 14:42:57] 2025-06-03 18:42:37,806 | INFO     | . log creation = 0 s
[2025-06-03 14:42:57] 2025-06-03 18:42:37,806 | INFO     | ..............................
[2025-06-03 14:42:57] 2025-06-03 18:42:37,890 | INFO     | 
[2025-06-03 14:42:57] 2025-06-03 18:42:37,890 | INFO     | job summary report
[2025-06-03 14:42:57] 2025-06-03 18:42:37,890 | INFO     | --------------------------------------------------
[2025-06-03 14:42:57] 2025-06-03 18:42:37,890 | INFO     | PanDA job id: 6677675706
[2025-06-03 14:42:57] 2025-06-03 18:42:37,890 | INFO     | task id: 45006595
[2025-06-03 14:42:57] 2025-06-03 18:42:37,891 | INFO     | errors: (none)
[2025-06-03 14:42:57] 2025-06-03 18:42:37,891 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 14:42:57] 2025-06-03 18:42:37,891 | INFO     | pilot state: finished 
[2025-06-03 14:42:57] 2025-06-03 18:42:37,891 | INFO     | transexitcode: 0
[2025-06-03 14:42:57] 2025-06-03 18:42:37,891 | INFO     | exeerrorcode: 0
[2025-06-03 14:42:57] 2025-06-03 18:42:37,891 | INFO     | exeerrordiag: 
[2025-06-03 14:42:57] 2025-06-03 18:42:37,891 | INFO     | exitcode: 0
[2025-06-03 14:42:57] 2025-06-03 18:42:37,891 | INFO     | exitmsg: OK
[2025-06-03 14:42:57] 2025-06-03 18:42:37,891 | INFO     | cpuconsumptiontime: 27617 s
[2025-06-03 14:42:57] 2025-06-03 18:42:37,891 | INFO     | nevents: 400
[2025-06-03 14:42:57] 2025-06-03 18:42:37,891 | INFO     | neventsw: 0
[2025-06-03 14:42:57] 2025-06-03 18:42:37,891 | INFO     | pid: 2996324
[2025-06-03 14:42:57] 2025-06-03 18:42:37,891 | INFO     | pgrp: 2996324
[2025-06-03 14:42:57] 2025-06-03 18:42:37,891 | INFO     | corecount: 8
[2025-06-03 14:42:57] 2025-06-03 18:42:37,892 | INFO     | event service: False
[2025-06-03 14:42:57] 2025-06-03 18:42:37,892 | INFO     | sizes: {0: 2405184, 4: 2405390, 11: 2405418, 4100: 2431240, 4101: 2440181, 4103: 2440237, 4109: 2440535}
[2025-06-03 14:42:57] 2025-06-03 18:42:37,892 | INFO     | --------------------------------------------------
[2025-06-03 14:42:57] 2025-06-03 18:42:37,892 | INFO     | 
[2025-06-03 14:42:57] 2025-06-03 18:42:37,892 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-06-03 14:42:57] 2025-06-03 18:42:37,909 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 14:42:57] 2025-06-03 18:42:37,909 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 14:42:57] 2025-06-03 18:42:37,909 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 14:42:57] 2025-06-03 18:42:37,909 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 14:42:57] 2025-06-03 18:42:37,909 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 14:42:57] 2025-06-03 18:42:37,909 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 14:42:57] 2025-06-03 18:42:37,910 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 14:42:57] 2025-06-03 18:42:37,910 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 14:42:57] 2025-06-03 18:42:37,910 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 14:42:57] 2025-06-03 18:42:37,910 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 14:42:57] 2025-06-03 18:42:37,910 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 14:42:57] 2025-06-03 18:42:37,910 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 14:42:57] 2025-06-03 18:42:37,910 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 14:42:57] 2025-06-03 18:42:37,910 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 14:42:57] 2025-06-03 18:42:37,910 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 14:42:57] 2025-06-03 18:42:37,910 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 14:42:57] 2025-06-03 18:42:37,910 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 14:42:57] 2025-06-03 18:42:37,910 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 14:42:57] 2025-06-03 18:42:37,910 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 14:42:57] 2025-06-03 18:42:37,910 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 14:42:57] 2025-06-03 18:42:37,911 | INFO     | job 6677675706 has completed (purged errors)
[2025-06-03 14:42:57] 2025-06-03 18:42:37,911 | INFO     | overall cleanup function is called
[2025-06-03 14:42:57] 2025-06-03 18:42:38,918 | INFO     | --- collectZombieJob: --- 10, [2996324]
[2025-06-03 14:42:57] 2025-06-03 18:42:38,919 | INFO     | zombie collector waiting for pid 2996324
[2025-06-03 14:42:57] 2025-06-03 18:42:38,919 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 14:42:57] 2025-06-03 18:42:38,919 | INFO     | collected zombie processes
[2025-06-03 14:42:57] 2025-06-03 18:42:38,919 | INFO     | will attempt to kill all subprocesses of pid=2996324
[2025-06-03 14:42:57] 2025-06-03 18:42:39,158 | INFO     | process IDs to be killed: [2996324] (in reverse order)
[2025-06-03 14:42:57] 2025-06-03 18:42:39,232 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 14:42:57] 2025-06-03 18:42:39,232 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 14:42:57] 2025-06-03 18:42:39,241 | INFO     | did not find any defunct processes belonging to 2996324
[2025-06-03 14:42:57] 2025-06-03 18:42:39,248 | INFO     | did not find any defunct processes belonging to 2996324
[2025-06-03 14:42:57] 2025-06-03 18:42:39,248 | INFO     | ready for new job
[2025-06-03 14:42:57] 2025-06-03 18:42:39,248 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 14:42:57] 2025-06-03 18:42:39,250 | INFO     | **************************************
[2025-06-03 14:42:57] 2025-06-03 18:42:39,250 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 14:42:57] 2025-06-03 18:42:39,250 | INFO     | **************************************
[2025-06-03 14:42:57] 2025-06-03 18:42:39,250 | INFO     | 
[2025-06-03 14:42:57] 2025-06-03 18:42:39,265 | INFO     | architecture information:
[2025-06-03 14:42:57] 2025-06-03 18:42:39,265 | INFO     | executing command: cat /etc/os-release
[2025-06-03 14:42:57] 2025-06-03 18:42:39,279 | INFO     | cat /etc/os-release:
[2025-06-03 14:42:57] NAME="CentOS Linux"
[2025-06-03 14:42:57] VERSION="7 (Core)"
[2025-06-03 14:42:57] ID="centos"
[2025-06-03 14:42:57] ID_LIKE="rhel fedora"
[2025-06-03 14:42:57] VERSION_ID="7"
[2025-06-03 14:42:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 14:42:57] ANSI_COLOR="0;31"
[2025-06-03 14:42:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 14:42:57] HOME_URL="https://www.centos.org/"
[2025-06-03 14:42:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 14:42:57] 
[2025-06-03 14:42:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 14:42:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 14:42:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 14:42:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 14:42:57] 
[2025-06-03 14:42:57] 2025-06-03 18:42:39,280 | INFO     | **************************************
[2025-06-03 14:42:57] 2025-06-03 18:42:39,781 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-06-03 14:42:57] 2025-06-03 18:42:39,795 | INFO     | sufficient remaining disk space (73305948160 B)
[2025-06-03 14:42:57] 2025-06-03 18:42:39,795 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 14:42:57] 2025-06-03 18:42:39,795 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 14:42:57] 2025-06-03 18:42:39,795 | INFO     | update_server=False
[2025-06-03 14:42:57] 2025-06-03 18:42:39,795 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 14:42:57] 2025-06-03 18:42:39,795 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:42:57] 2025-06-03 18:42:39,796 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 14:42:57] 2025-06-03 18:42:39,796 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 14:42:57] 2025-06-03 18:42:39,796 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 14:42:57] 2025-06-03 18:42:39,796 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 14:42:57] 2025-06-03 18:42:40,011 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:42:57] 2025-06-03 18:42:40,011 | INFO     | aborting loop
[2025-06-03 14:42:57] 2025-06-03 18:42:40,131 | INFO     | all payload control threads have been joined
[2025-06-03 14:42:57] 2025-06-03 18:42:40,274 | INFO     | all data control threads have been joined
[2025-06-03 14:42:57] 2025-06-03 18:42:40,800 | INFO     | [job] queue monitor thread has finished
[2025-06-03 14:42:57] 2025-06-03 18:42:40,801 | INFO     | [job] retrieve thread has finished
[2025-06-03 14:42:57] 2025-06-03 18:42:41,006 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 14:42:57] 2025-06-03 18:42:41,016 | INFO     | [job] job monitor thread has finished
[2025-06-03 14:42:57] 2025-06-03 18:42:41,136 | INFO     | [payload] control thread has finished
[2025-06-03 14:42:57] 2025-06-03 18:42:41,165 | INFO     | [payload] failed_post thread has finished
[2025-06-03 14:42:57] 2025-06-03 18:42:41,280 | INFO     | [data] control thread has finished
[2025-06-03 14:42:57] 2025-06-03 18:42:41,292 | INFO     | [data] copytool_in thread has finished
[2025-06-03 14:42:57] 2025-06-03 18:42:41,442 | INFO     | all job control threads have been joined
[2025-06-03 14:42:57] 2025-06-03 18:42:41,607 | INFO     | [job] validate thread has finished
[2025-06-03 14:42:57] 2025-06-03 18:42:41,758 | INFO     | [payload] validate_post thread has finished
[2025-06-03 14:42:57] 2025-06-03 18:42:41,798 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 14:42:57] 2025-06-03 18:42:41,945 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 14:42:57] 2025-06-03 18:42:41,990 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 14:42:57] 2025-06-03 18:42:42,444 | INFO     | [job] control thread has finished
[2025-06-03 14:42:57] 2025-06-03 18:42:42,867 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 14:42:57] 2025-06-03 18:42:43,011 | INFO     | [data] copytool_out thread has finished
[2025-06-03 14:42:57] 2025-06-03 18:42:46,873 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 14:42:57] 2025-06-03 18:42:50,517 | INFO     | job.realtimelogging is not enabled
[2025-06-03 14:42:57] 2025-06-03 18:42:51,522 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 14:42:57] 2025-06-03 18:42:51,768 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139636835501888)>', '<ExcThread(monitor, started 139636206716672)>']
[2025-06-03 14:42:57] 2025-06-03 18:42:51,850 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 14:42:57] 2025-06-03 18:42:51,850 | INFO     | [monitor] control thread has ended
[2025-06-03 14:42:57] 2025-06-03 18:42:56,793 | INFO     | all workflow threads have been joined
[2025-06-03 14:42:57] 2025-06-03 18:42:56,793 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 14:42:57] 2025-06-03 18:42:56,793 | INFO     | traces error code: 0
[2025-06-03 14:42:57] 2025-06-03 18:42:56,794 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 14:42:57] 2025-06-03 18:42:56,904 [wrapper] ==== pilot stdout END ====
[2025-06-03 14:42:57] 2025-06-03 18:42:56,907 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 14:42:57] 2025-06-03 18:42:56,909 [wrapper] pilotpid: 2989412
[2025-06-03 14:42:57] 2025-06-03 18:42:56,912 [wrapper] Pilot exit status: 0
[2025-06-03 14:42:57] 2025-06-03 18:42:56,921 [wrapper] pandaids: 6677675706
[2025-06-03 14:42:57] 2025-06-03 18:42:56,970 [wrapper] cleanup supervisor_pilot 3166523 2989413
[2025-06-03 14:42:57] 2025-06-03 18:42:56,973 [wrapper] Test setup, not cleaning
[2025-06-03 14:42:57] 2025-06-03 18:42:56,975 [wrapper] apfmon messages muted
[2025-06-03 14:42:57] 2025-06-03 18:42:56,977 [wrapper] ==== wrapper stdout END ====
[2025-06-03 14:42:57] 2025-06-03 18:42:56,979 [wrapper] ==== wrapper stderr END ====
[2025-06-03 14:42:57]  *** Error codes and diagnostics ***
[2025-06-03 14:42:57]     "exeErrorCode": 0,
[2025-06-03 14:42:57]     "exeErrorDiag": "",
[2025-06-03 14:42:57]     "pilotErrorCode": 0,
[2025-06-03 14:42:57]     "pilotErrorDiag": "",
[2025-06-03 14:42:57]  *** Listing of results directory ***
[2025-06-03 14:42:57] total 388932
[2025-06-03 14:42:57] -rwx------. 1 boincer umatlas     37140 Jun  3 10:52 runpilot2-wrapper.sh
[2025-06-03 14:42:57] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 10:52 pilot3.tar.gz
[2025-06-03 14:42:57] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 10:52 queuedata.json
[2025-06-03 14:42:57] -rw-r--r--. 1 boincer umatlas       100 Jun  3 13:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 14:42:57] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 13:33 run_atlas
[2025-06-03 14:42:57] -rw-r--r--. 1 boincer umatlas       105 Jun  3 13:33 job.xml
[2025-06-03 14:42:57] -rw-r--r--. 2 boincer umatlas 214539274 Jun  3 13:33 EVNT.45006593._001447.pool.root.1
[2025-06-03 14:42:57] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:33 start_atlas.sh
[2025-06-03 14:42:57] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 13:33 shared
[2025-06-03 14:42:57] -rw-r--r--. 2 boincer umatlas    508878 Jun  3 13:33 input.tar.gz
[2025-06-03 14:42:57] -rw-r--r--. 1 boincer umatlas         0 Jun  3 13:33 boinc_lockfile
[2025-06-03 14:42:57] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 13:33 pandaJob.out
[2025-06-03 14:42:57] -rw-------. 1 boincer umatlas    985078 Jun  3 13:33 agis_schedconf.cvmfs.json
[2025-06-03 14:42:57] -rw-------. 1 boincer umatlas   1603667 Jun  3 13:33 agis_ddmendpoints.agis.ALL.json
[2025-06-03 14:42:57] drwx------. 4 boincer umatlas      4096 Jun  3 13:33 pilot3
[2025-06-03 14:42:57] -rw-r--r--. 1 boincer umatlas      6840 Jun  3 14:40 init_data.xml
[2025-06-03 14:42:57] -rw-------. 1 boincer umatlas        95 Jun  3 14:41 pilot_heartbeat.json
[2025-06-03 14:42:57] -rw-r--r--. 1 boincer umatlas       530 Jun  3 14:41 boinc_task_state.xml
[2025-06-03 14:42:57] -rw-------. 1 boincer umatlas 178478817 Jun  3 14:41 HITS.45006595._036006.pool.root.1
[2025-06-03 14:42:57] -rw-------. 1 boincer umatlas      1034 Jun  3 14:42 memory_monitor_summary.json
[2025-06-03 14:42:57] -rw-------. 1 boincer umatlas    291831 Jun  3 14:42 log.45006595._036006.job.log.tgz.1
[2025-06-03 14:42:57] -rw-------. 1 boincer umatlas      7717 Jun  3 14:42 heartbeat.json
[2025-06-03 14:42:57] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 14:42 boinc_mmap_file
[2025-06-03 14:42:57] -rw-r--r--. 1 boincer umatlas        27 Jun  3 14:42 wrapper_checkpoint.txt
[2025-06-03 14:42:57] -rw-------. 1 boincer umatlas      4548 Jun  3 14:42 pilotlog.txt
[2025-06-03 14:42:57] -rw-------. 1 boincer umatlas    414589 Jun  3 14:42 log.45006595._036006.job.log.1
[2025-06-03 14:42:57] -rw-------. 1 boincer umatlas       357 Jun  3 14:42 output.list
[2025-06-03 14:42:57] -rw-r--r--. 1 boincer umatlas       620 Jun  3 14:42 runtime_log
[2025-06-03 14:42:57] -rw-------. 1 boincer umatlas    727040 Jun  3 14:42 result.tar.gz
[2025-06-03 14:42:57] -rw-------. 1 boincer umatlas       651 Jun  3 14:42 SqNODm6Aig7n9Rq4apOajLDm4fhM0noT9bVof3QYDm1yYKDm0w949n.diag
[2025-06-03 14:42:57] -rw-r--r--. 1 boincer umatlas      8664 Jun  3 14:42 runtime_log.err
[2025-06-03 14:42:57] -rw-r--r--. 1 boincer umatlas     21364 Jun  3 14:42 stderr.txt
[2025-06-03 14:42:57] HITS file was successfully produced:
[2025-06-03 14:42:57] -rw-------. 1 boincer umatlas 178478817 Jun  3 14:41 shared/HITS.pool.root.1
[2025-06-03 14:42:57]  *** Contents of shared directory: ***
[2025-06-03 14:42:57] total 385040
[2025-06-03 14:42:57] -rw-r--r--. 2 boincer umatlas 214539274 Jun  3 13:33 ATLAS.root_0
[2025-06-03 14:42:57] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:33 start_atlas.sh
[2025-06-03 14:42:57] -rw-r--r--. 2 boincer umatlas    508878 Jun  3 13:33 input.tar.gz
[2025-06-03 14:42:57] -rw-------. 1 boincer umatlas 178478817 Jun  3 14:41 HITS.pool.root.1
[2025-06-03 14:42:57] -rw-------. 1 boincer umatlas    727040 Jun  3 14:42 result.tar.gz
14:42:58 (2985106): run_atlas exited; CPU time 27703.276323
14:42:58 (2985106): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN