Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:36:07 (16822): wrapper (7.7.26015): starting
13:36:07 (16822): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 13:36:07] Arguments: --nthreads 8
[2025-06-03 13:36:07] Threads: 8
[2025-06-03 13:36:07] Checking for CVMFS
[2025-06-03 13:36:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:36:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:36:07] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:36:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:36:07] 2.11.2.0 1570 107710 234336 146750 0 186 18151778 18432001 2892 130560 0 475182767 99.061 990483324 35399 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 13:36:07] CVMFS is ok
[2025-06-03 13:36:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 13:36:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 13:36:07] Further information can be found at the LHC@home message board.
[2025-06-03 13:36:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:36:07] Checking for apptainer binary...
[2025-06-03 13:36:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:36:07] Running /usr/bin/apptainer --version
[2025-06-03 13:36:08] apptainer version 1.3.2-1.el7
[2025-06-03 13:36:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:36:08] c-210-9.aglt2.org
[2025-06-03 13:36:08] apptainer works
[2025-06-03 13:36:08] Set ATHENA_PROC_NUMBER=8
[2025-06-03 13:36:08] Set ATHENA_CORE_NUMBER=8
[2025-06-03 13:36:08] Starting ATLAS job with PandaID=6677676300
[2025-06-03 13:36:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 18:08:09]  *** The last 200 lines of the pilot log: ***
[2025-06-03 18:08:09] 2025-06-03 22:06:10,138 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 18:08:09] 2025-06-03 22:06:10,138 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 18:08:09] 2025-06-03 22:06:10,139 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 18:08:09] 2025-06-03 22:06:10,139 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 18:08:09] 2025-06-03 22:06:10,144 | INFO     | fitting pss+swap vs Time
[2025-06-03 18:08:09] 2025-06-03 22:06:10,145 | INFO     | sum of square deviations: 5770606398.339595
[2025-06-03 18:08:09] 2025-06-03 22:06:10,147 | INFO     | sum of deviations: -11204889609.584885
[2025-06-03 18:08:09] 2025-06-03 22:06:10,147 | INFO     | mean x: 1748980252.4150944
[2025-06-03 18:08:09] 2025-06-03 22:06:10,148 | INFO     | mean y: 2456302.396226415
[2025-06-03 18:08:09] 2025-06-03 22:06:10,148 | INFO     | -- intersect: 3398482526.48488
[2025-06-03 18:08:09] 2025-06-03 22:06:10,148 | INFO     | intersect: 3398482526.48488
[2025-06-03 18:08:09] 2025-06-03 22:06:10,148 | INFO     | chi2: 2.8666814501914346
[2025-06-03 18:08:09] 2025-06-03 22:06:10,149 | INFO     | sum of square deviations: 5450115569.303835
[2025-06-03 18:08:09] 2025-06-03 22:06:10,151 | INFO     | sum of deviations: 25032142813.19616
[2025-06-03 18:08:09] 2025-06-03 22:06:10,151 | INFO     | mean x: 1748980099.9192307
[2025-06-03 18:08:09] 2025-06-03 22:06:10,152 | INFO     | mean y: 2473347.5807692306
[2025-06-03 18:08:09] 2025-06-03 22:06:10,152 | INFO     | -- intersect: -8030515876.574079
[2025-06-03 18:08:09] 2025-06-03 22:06:10,152 | INFO     | intersect: -8030515876.574079
[2025-06-03 18:08:09] 2025-06-03 22:06:10,152 | INFO     | chi2: 1.1498710728271215
[2025-06-03 18:08:09] 2025-06-03 22:06:10,152 | INFO     | current chi2=1.1498710728271215 (change=59.888425246888374 %)
[2025-06-03 18:08:09] 2025-06-03 22:06:10,153 | INFO     | sum of square deviations: 5141733728.407875
[2025-06-03 18:08:09] 2025-06-03 22:06:10,155 | INFO     | sum of deviations: 24445774742.454906
[2025-06-03 18:08:09] 2025-06-03 22:06:10,155 | INFO     | mean x: 1748979947.427451
[2025-06-03 18:08:09] 2025-06-03 22:06:10,155 | INFO     | mean y: 2473057.592156863
[2025-06-03 18:08:09] 2025-06-03 22:06:10,155 | INFO     | -- intersect: -8312848598.926436
[2025-06-03 18:08:09] 2025-06-03 22:06:10,155 | INFO     | intersect: -8312848598.926436
[2025-06-03 18:08:09] 2025-06-03 22:06:10,156 | INFO     | chi2: 1.1502513190789307
[2025-06-03 18:08:09] 2025-06-03 22:06:10,156 | INFO     | current chi2=1.1502513190789307 (change=-0.03306859880163118 %)
[2025-06-03 18:08:09] 2025-06-03 22:06:10,156 | INFO     | right removable region: 254
[2025-06-03 18:08:09] 2025-06-03 22:06:10,157 | INFO     | sum of square deviations: 5450064512.46152
[2025-06-03 18:08:09] 2025-06-03 22:06:10,159 | INFO     | sum of deviations: -41685639107.84616
[2025-06-03 18:08:09] 2025-06-03 22:06:10,159 | INFO     | mean x: 1748980404.9230769
[2025-06-03 18:08:09] 2025-06-03 22:06:10,159 | INFO     | mean y: 2470650.707692308
[2025-06-03 18:08:09] 2025-06-03 22:06:10,159 | INFO     | -- intersect: 13379810643.585949
[2025-06-03 18:08:09] 2025-06-03 22:06:10,159 | INFO     | intersect: 13379810643.585949
[2025-06-03 18:08:09] 2025-06-03 22:06:10,160 | INFO     | chi2: 1.763242366526899
[2025-06-03 18:08:09] 2025-06-03 22:06:10,160 | INFO     | current chi2=1.763242366526899 (change=38.491862553854695 %)
[2025-06-03 18:08:09] 2025-06-03 22:06:10,160 | INFO     | sum of square deviations: 5141615876.549013
[2025-06-03 18:08:09] 2025-06-03 22:06:10,162 | INFO     | sum of deviations: -39309114855.84315
[2025-06-03 18:08:09] 2025-06-03 22:06:10,163 | INFO     | mean x: 1748980557.4313726
[2025-06-03 18:08:09] 2025-06-03 22:06:10,163 | INFO     | mean y: 2469473.9803921566
[2025-06-03 18:08:09] 2025-06-03 22:06:10,163 | INFO     | -- intersect: 13373922974.869127
[2025-06-03 18:08:09] 2025-06-03 22:06:10,163 | INFO     | intersect: 13373922974.869127
[2025-06-03 18:08:09] 2025-06-03 22:06:10,164 | INFO     | chi2: 1.763163773034229
[2025-06-03 18:08:09] 2025-06-03 22:06:10,164 | INFO     | current chi2=1.763163773034229 (change=0.004457327827525381 %)
[2025-06-03 18:08:09] 2025-06-03 22:06:10,164 | INFO     | left removable region: 20
[2025-06-03 18:08:09] 2025-06-03 22:06:10,164 | INFO     | sum of square deviations: 3973059520.6538515
[2025-06-03 18:08:09] 2025-06-03 22:06:10,166 | INFO     | sum of deviations: 1003123298.9615381
[2025-06-03 18:08:09] 2025-06-03 22:06:10,166 | INFO     | mean x: 1748980526.9615386
[2025-06-03 18:08:09] 2025-06-03 22:06:10,166 | INFO     | mean y: 2484601.106837607
[2025-06-03 18:08:09] 2025-06-03 22:06:10,166 | INFO     | -- intersect: -439100305.16117036
[2025-06-03 18:08:09] 2025-06-03 22:06:10,167 | INFO     | intersect: -439100305.16117036
[2025-06-03 18:08:09] 2025-06-03 22:06:10,167 | INFO     | chi2: 0.009950879997267426
[2025-06-03 18:08:09] 2025-06-03 22:06:10,167 | INFO     | -- intersect: -439100305.16117036
[2025-06-03 18:08:09] 2025-06-03 22:06:10,167 | INFO     | current memory leak: 0.25 B/s (using 234 data points, chi2=0.01)
[2025-06-03 18:08:09] 2025-06-03 22:06:10,168 | INFO     | ..............................
[2025-06-03 18:08:09] 2025-06-03 22:06:10,168 | INFO     | . Timing measurements:
[2025-06-03 18:08:09] 2025-06-03 22:06:10,168 | INFO     | . get job = 0 s
[2025-06-03 18:08:09] 2025-06-03 22:06:10,168 | INFO     | . initial setup = 2 s
[2025-06-03 18:08:09] 2025-06-03 22:06:10,169 | INFO     | . payload setup = 5 s
[2025-06-03 18:08:09] 2025-06-03 22:06:10,169 | INFO     | . stage-in = 0 s
[2025-06-03 18:08:09] 2025-06-03 22:06:10,169 | INFO     | . payload execution = 16114 s
[2025-06-03 18:08:09] 2025-06-03 22:06:10,169 | INFO     | . stage-out = 4 s
[2025-06-03 18:08:09] 2025-06-03 22:06:10,169 | INFO     | . log creation = 0 s
[2025-06-03 18:08:09] 2025-06-03 22:06:10,169 | INFO     | ..............................
[2025-06-03 18:08:09] 2025-06-03 22:06:10,724 | INFO     | 
[2025-06-03 18:08:09] 2025-06-03 22:06:10,725 | INFO     | job summary report
[2025-06-03 18:08:09] 2025-06-03 22:06:10,725 | INFO     | --------------------------------------------------
[2025-06-03 18:08:09] 2025-06-03 22:06:10,725 | INFO     | PanDA job id: 6677676300
[2025-06-03 18:08:09] 2025-06-03 22:06:10,725 | INFO     | task id: 45006595
[2025-06-03 18:08:09] 2025-06-03 22:06:10,725 | INFO     | errors: (none)
[2025-06-03 18:08:09] 2025-06-03 22:06:10,725 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 18:08:09] 2025-06-03 22:06:10,725 | INFO     | pilot state: finished 
[2025-06-03 18:08:09] 2025-06-03 22:06:10,725 | INFO     | transexitcode: 0
[2025-06-03 18:08:09] 2025-06-03 22:06:10,726 | INFO     | exeerrorcode: 0
[2025-06-03 18:08:09] 2025-06-03 22:06:10,726 | INFO     | exeerrordiag: 
[2025-06-03 18:08:09] 2025-06-03 22:06:10,726 | INFO     | exitcode: 0
[2025-06-03 18:08:09] 2025-06-03 22:06:10,726 | INFO     | exitmsg: OK
[2025-06-03 18:08:09] 2025-06-03 22:06:10,726 | INFO     | cpuconsumptiontime: 45708 s
[2025-06-03 18:08:09] 2025-06-03 22:06:10,726 | INFO     | nevents: 400
[2025-06-03 18:08:09] 2025-06-03 22:06:10,726 | INFO     | neventsw: 0
[2025-06-03 18:08:09] 2025-06-03 22:06:10,726 | INFO     | pid: 29456
[2025-06-03 18:08:09] 2025-06-03 22:06:10,726 | INFO     | pgrp: 29456
[2025-06-03 18:08:09] 2025-06-03 22:06:10,726 | INFO     | corecount: 8
[2025-06-03 18:08:09] 2025-06-03 22:06:10,726 | INFO     | event service: False
[2025-06-03 18:08:09] 2025-06-03 22:06:10,727 | INFO     | sizes: {0: 2405184, 3: 2405390, 11: 2405418, 16124: 2436538, 16130: 2445535, 16179: 2445649}
[2025-06-03 18:08:09] 2025-06-03 22:06:10,727 | INFO     | --------------------------------------------------
[2025-06-03 18:08:09] 2025-06-03 22:06:10,727 | INFO     | 
[2025-06-03 18:08:09] 2025-06-03 22:06:10,727 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-06-03 18:08:09] 2025-06-03 22:06:10,921 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 18:08:09] 2025-06-03 22:06:10,921 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 18:08:09] 2025-06-03 22:06:10,921 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 18:08:09] 2025-06-03 22:06:10,922 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 18:08:09] 2025-06-03 22:06:10,922 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 18:08:09] 2025-06-03 22:06:10,922 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 18:08:09] 2025-06-03 22:06:10,922 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 18:08:09] 2025-06-03 22:06:10,922 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 18:08:09] 2025-06-03 22:06:10,922 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 18:08:09] 2025-06-03 22:06:10,922 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 18:08:09] 2025-06-03 22:06:10,922 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 18:08:09] 2025-06-03 22:06:10,922 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 18:08:09] 2025-06-03 22:06:10,922 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 18:08:09] 2025-06-03 22:06:10,922 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 18:08:09] 2025-06-03 22:06:10,922 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 18:08:09] 2025-06-03 22:06:10,922 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 18:08:09] 2025-06-03 22:06:10,922 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 18:08:09] 2025-06-03 22:06:10,922 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 18:08:09] 2025-06-03 22:06:10,922 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 18:08:09] 2025-06-03 22:06:10,923 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 18:08:09] 2025-06-03 22:06:10,923 | INFO     | job 6677676300 has completed (purged errors)
[2025-06-03 18:08:09] 2025-06-03 22:06:10,923 | INFO     | overall cleanup function is called
[2025-06-03 18:08:09] 2025-06-03 22:06:11,929 | INFO     | --- collectZombieJob: --- 10, [29456]
[2025-06-03 18:08:09] 2025-06-03 22:06:11,930 | INFO     | zombie collector waiting for pid 29456
[2025-06-03 18:08:09] 2025-06-03 22:06:11,930 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 18:08:09] 2025-06-03 22:06:11,930 | INFO     | collected zombie processes
[2025-06-03 18:08:09] 2025-06-03 22:06:11,930 | INFO     | will attempt to kill all subprocesses of pid=29456
[2025-06-03 18:08:09] 2025-06-03 22:06:12,502 | INFO     | process IDs to be killed: [29456] (in reverse order)
[2025-06-03 18:08:09] 2025-06-03 22:06:13,120 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 18:08:09] 2025-06-03 22:06:13,120 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 18:08:09] 2025-06-03 22:06:13,130 | INFO     | did not find any defunct processes belonging to 29456
[2025-06-03 18:08:09] 2025-06-03 22:06:13,140 | INFO     | did not find any defunct processes belonging to 29456
[2025-06-03 18:08:09] 2025-06-03 22:06:13,140 | INFO     | ready for new job
[2025-06-03 18:08:09] 2025-06-03 22:06:13,140 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 18:08:09] 2025-06-03 22:06:13,142 | INFO     | **************************************
[2025-06-03 18:08:09] 2025-06-03 22:06:13,142 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 18:08:09] 2025-06-03 22:06:13,142 | INFO     | **************************************
[2025-06-03 18:08:09] 2025-06-03 22:06:13,142 | INFO     | 
[2025-06-03 18:08:09] 2025-06-03 22:06:13,145 | INFO     | architecture information:
[2025-06-03 18:08:09] 2025-06-03 22:06:13,145 | INFO     | executing command: cat /etc/os-release
[2025-06-03 18:08:09] 2025-06-03 22:06:13,189 | INFO     | cat /etc/os-release:
[2025-06-03 18:08:09] NAME="CentOS Linux"
[2025-06-03 18:08:09] VERSION="7 (Core)"
[2025-06-03 18:08:09] ID="centos"
[2025-06-03 18:08:09] ID_LIKE="rhel fedora"
[2025-06-03 18:08:09] VERSION_ID="7"
[2025-06-03 18:08:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 18:08:09] ANSI_COLOR="0;31"
[2025-06-03 18:08:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 18:08:09] HOME_URL="https://www.centos.org/"
[2025-06-03 18:08:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 18:08:09] 
[2025-06-03 18:08:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 18:08:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 18:08:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 18:08:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 18:08:09] 
[2025-06-03 18:08:09] 2025-06-03 22:06:13,189 | INFO     | **************************************
[2025-06-03 18:08:09] 2025-06-03 22:06:13,692 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-06-03 18:08:09] 2025-06-03 22:06:13,772 | INFO     | sufficient remaining disk space (55150903296 B)
[2025-06-03 18:08:09] 2025-06-03 22:06:13,773 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 18:08:09] 2025-06-03 22:06:13,773 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 18:08:09] 2025-06-03 22:06:13,773 | INFO     | update_server=False
[2025-06-03 18:08:09] 2025-06-03 22:06:13,773 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 18:08:09] 2025-06-03 22:06:13,773 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:08:09] 2025-06-03 22:06:13,774 | INFO     | aborting loop
[2025-06-03 18:08:09] 2025-06-03 22:06:13,884 | INFO     | all data control threads have been joined
[2025-06-03 18:08:09] 2025-06-03 22:06:14,268 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 18:08:09] 2025-06-03 22:06:14,609 | INFO     | PID=20501 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 18:08:09] 2025-06-03 22:06:14,610 | INFO     | .. there are 36 such processes running
[2025-06-03 18:08:09] 2025-06-03 22:06:14,610 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 18:08:09] 2025-06-03 22:06:14,610 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 18:08:09] 2025-06-03 22:06:14,610 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 18:08:09] 2025-06-03 22:06:14,639 | INFO     | all job control threads have been joined
[2025-06-03 18:08:09] 2025-06-03 22:06:14,781 | INFO     | [job] job monitor thread has finished
[2025-06-03 18:08:09] 2025-06-03 22:06:14,787 | INFO     | [job] retrieve thread has finished
[2025-06-03 18:08:09] 2025-06-03 22:06:14,891 | INFO     | [data] control thread has finished
[2025-06-03 18:08:09] 2025-06-03 22:06:15,184 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 18:08:09] 2025-06-03 22:06:15,255 | INFO     | all payload control threads have been joined
[2025-06-03 18:08:09] 2025-06-03 22:06:15,616 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:08:09] 2025-06-03 22:06:15,646 | INFO     | [job] control thread has finished
[2025-06-03 18:08:09] 2025-06-03 22:06:15,688 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 18:08:09] 2025-06-03 22:06:15,731 | INFO     | [job] validate thread has finished
[2025-06-03 18:08:09] 2025-06-03 22:06:15,744 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 18:08:09] 2025-06-03 22:06:15,757 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 18:08:09] 2025-06-03 22:06:16,084 | INFO     | [data] copytool_in thread has finished
[2025-06-03 18:08:09] 2025-06-03 22:06:16,261 | INFO     | [payload] control thread has finished
[2025-06-03 18:08:09] 2025-06-03 22:06:16,275 | INFO     | [data] copytool_out thread has finished
[2025-06-03 18:08:09] 2025-06-03 22:06:16,301 | INFO     | [payload] validate_post thread has finished
[2025-06-03 18:08:09] 2025-06-03 22:06:16,301 | INFO     | [payload] failed_post thread has finished
[2025-06-03 18:08:09] 2025-06-03 22:06:16,624 | INFO     | [job] queue monitor thread has finished
[2025-06-03 18:08:09] 2025-06-03 22:06:16,875 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 18:08:09] 2025-06-03 22:06:17,821 [wrapper] supervise_pilot (15 min periods counter: 19)
[2025-06-03 18:08:09] 2025-06-03 22:06:20,885 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 18:08:09] 2025-06-03 22:06:22,476 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140017743972160)>', '<ExcThread(monitor, started 140017007589120)>']
[2025-06-03 18:08:09] 2025-06-03 22:06:22,659 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 18:08:09] 2025-06-03 22:06:22,660 | INFO     | [monitor] control thread has ended
[2025-06-03 18:08:09] 2025-06-03 22:06:27,501 | INFO     | all workflow threads have been joined
[2025-06-03 18:08:09] 2025-06-03 22:06:27,502 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 18:08:09] 2025-06-03 22:06:27,502 | INFO     | traces error code: 0
[2025-06-03 18:08:09] 2025-06-03 22:06:27,502 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 18:08:09] 2025-06-03 22:06:28,515 [wrapper] ==== pilot stdout END ====
[2025-06-03 18:08:09] 2025-06-03 22:06:28,563 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 18:08:09] 2025-06-03 22:06:28,699 [wrapper] pilotpid: 20501
[2025-06-03 18:08:09] 2025-06-03 22:06:28,744 [wrapper] Pilot exit status: 0
[2025-06-03 18:08:09] 2025-06-03 22:06:28,906 [wrapper] pandaids: 6677676300
[2025-06-03 18:08:09] 2025-06-03 22:06:29,439 [wrapper] cleanup supervisor_pilot  8529 20502
[2025-06-03 18:08:09] 2025-06-03 22:06:29,479 [wrapper] Test setup, not cleaning
[2025-06-03 18:08:09] 2025-06-03 22:06:29,485 [wrapper] apfmon messages muted
[2025-06-03 18:08:09] 2025-06-03 22:06:29,500 [wrapper] ==== wrapper stdout END ====
[2025-06-03 18:08:09] 2025-06-03 22:06:29,505 [wrapper] ==== wrapper stderr END ====
[2025-06-03 18:08:09]  *** Error codes and diagnostics ***
[2025-06-03 18:08:09]     "exeErrorCode": 0,
[2025-06-03 18:08:09]     "exeErrorDiag": "",
[2025-06-03 18:08:09]     "pilotErrorCode": 0,
[2025-06-03 18:08:09]     "pilotErrorDiag": "",
[2025-06-03 18:08:09]  *** Listing of results directory ***
[2025-06-03 18:08:09] total 392360
[2025-06-03 18:08:09] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 10:52 pilot3.tar.gz
[2025-06-03 18:08:09] -rwx------ 1 boincer umatlas     37140 Jun  3 11:02 runpilot2-wrapper.sh
[2025-06-03 18:08:09] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 11:02 queuedata.json
[2025-06-03 18:08:09] -rw-r--r-- 1 boincer umatlas       100 Jun  3 13:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 18:08:09] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 13:36 run_atlas
[2025-06-03 18:08:09] -rw-r--r-- 1 boincer umatlas       105 Jun  3 13:36 job.xml
[2025-06-03 18:08:09] -rw-r--r-- 2 boincer umatlas 216592485 Jun  3 13:36 EVNT.45006593._001463.pool.root.1
[2025-06-03 18:08:09] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 13:36 start_atlas.sh
[2025-06-03 18:08:09] drwxrwx--x 2 boincer umatlas      4096 Jun  3 13:36 shared
[2025-06-03 18:08:09] -rw-r--r-- 2 boincer umatlas    508874 Jun  3 13:36 input.tar.gz
[2025-06-03 18:08:09] -rw-r--r-- 1 boincer umatlas         0 Jun  3 13:36 boinc_lockfile
[2025-06-03 18:08:09] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 13:36 pandaJob.out
[2025-06-03 18:08:09] -rw------- 1 boincer umatlas    985078 Jun  3 13:36 agis_schedconf.cvmfs.json
[2025-06-03 18:08:09] drwx------ 4 boincer umatlas      4096 Jun  3 13:36 pilot3
[2025-06-03 18:08:09] -rw-r--r-- 1 boincer umatlas      6226 Jun  3 18:02 init_data.xml
[2025-06-03 18:08:09] -rw------- 1 boincer umatlas 177872154 Jun  3 18:03 HITS.45006595._036424.pool.root.1
[2025-06-03 18:08:09] -rw-r--r-- 1 boincer umatlas       530 Jun  3 18:03 boinc_task_state.xml
[2025-06-03 18:08:09] -rw------- 1 boincer umatlas      1057 Jun  3 18:05 memory_monitor_summary.json
[2025-06-03 18:08:09] -rw------- 1 boincer umatlas   1603667 Jun  3 18:05 agis_ddmendpoints.agis.ALL.json
[2025-06-03 18:08:09] -rw------- 1 boincer umatlas    419432 Jun  3 18:05 log.45006595._036424.job.log.tgz.1
[2025-06-03 18:08:09] -rw------- 1 boincer umatlas        95 Jun  3 18:05 pilot_heartbeat.json
[2025-06-03 18:08:09] -rw------- 1 boincer umatlas      7746 Jun  3 18:06 heartbeat.json
[2025-06-03 18:08:09] -rw------- 1 boincer umatlas      4746 Jun  3 18:06 pilotlog.txt
[2025-06-03 18:08:09] -rw------- 1 boincer umatlas   1317878 Jun  3 18:06 log.45006595._036424.job.log.1
[2025-06-03 18:08:09] -rw------- 1 boincer umatlas       357 Jun  3 18:06 output.list
[2025-06-03 18:08:09] -rw-r--r-- 1 boincer umatlas       620 Jun  3 18:06 runtime_log
[2025-06-03 18:08:09] -rw------- 1 boincer umatlas   1761280 Jun  3 18:06 result.tar.gz
[2025-06-03 18:08:09] -rw-r--r-- 1 boincer umatlas      8655 Jun  3 18:06 runtime_log.err
[2025-06-03 18:08:09] -rw------- 1 boincer umatlas       660 Jun  3 18:06 RnRLDmOLig7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrikKDmlFDlDn.diag
[2025-06-03 18:08:09] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 18:08 boinc_mmap_file
[2025-06-03 18:08:09] -rw-r--r-- 1 boincer umatlas        27 Jun  3 18:08 wrapper_checkpoint.txt
[2025-06-03 18:08:09] -rw-r--r-- 1 boincer umatlas     20912 Jun  3 18:08 stderr.txt
[2025-06-03 18:08:09] HITS file was successfully produced:
[2025-06-03 18:08:09] -rw------- 1 boincer umatlas 177872154 Jun  3 18:03 shared/HITS.pool.root.1
[2025-06-03 18:08:09]  *** Contents of shared directory: ***
[2025-06-03 18:08:09] total 387464
[2025-06-03 18:08:09] -rw-r--r-- 2 boincer umatlas 216592485 Jun  3 13:36 ATLAS.root_0
[2025-06-03 18:08:09] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 13:36 start_atlas.sh
[2025-06-03 18:08:09] -rw-r--r-- 2 boincer umatlas    508874 Jun  3 13:36 input.tar.gz
[2025-06-03 18:08:09] -rw------- 1 boincer umatlas 177872154 Jun  3 18:03 HITS.pool.root.1
[2025-06-03 18:08:09] -rw------- 1 boincer umatlas   1761280 Jun  3 18:06 result.tar.gz
18:08:11 (16822): run_atlas exited; CPU time 46131.540410
18:08:11 (16822): called boinc_finish(0)

</stderr_txt>
]]>

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