Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:47:24 (12281): wrapper (7.7.26015): starting
01:47:24 (12281): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 01:47:24] Arguments: --nthreads 8
[2025-06-04 01:47:24] Threads: 8
[2025-06-04 01:47:24] Checking for CVMFS
[2025-06-04 01:47:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 01:47:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 01:47:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 01:47:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 01:47:27] 2.11.2.0 7420 32435 96924 146761 0 261 16745349 25165825 3891 130560 0 16041217 99.794 19464952 2297 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 01:47:27] CVMFS is ok
[2025-06-04 01:47:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 01:47:27] Checking for apptainer binary...
[2025-06-04 01:47:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 01:47:27] Running /usr/bin/apptainer --version
[2025-06-04 01:47:27] apptainer version 1.3.2-1.el7
[2025-06-04 01:47:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 01:47:38] cg-vwn450.simple-grid.lan
[2025-06-04 01:47:38] apptainer works
[2025-06-04 01:47:38] Set ATHENA_PROC_NUMBER=8
[2025-06-04 01:47:38] Set ATHENA_CORE_NUMBER=8
[2025-06-04 01:47:38] Starting ATLAS job with PandaID=6677676588
[2025-06-04 01:47:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 05:53:39]  *** The last 200 lines of the pilot log: ***
[2025-06-04 05:53:39] 2025-06-04 03:47:57,719 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6677676588/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 05:53:39] 2025-06-04 03:47:57,720 | INFO     | extracted standard info from prmon json
[2025-06-04 05:53:39] 2025-06-04 03:47:57,720 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 05:53:39] 2025-06-04 03:47:57,720 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 05:53:39] 2025-06-04 03:47:57,721 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 05:53:39] 2025-06-04 03:47:57,721 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 05:53:39] 2025-06-04 03:47:57,726 | INFO     | fitting pss+swap vs Time
[2025-06-04 05:53:39] 2025-06-04 03:47:57,727 | INFO     | sum of square deviations: 3579276412.5
[2025-06-04 05:53:39] 2025-06-04 03:47:57,729 | INFO     | sum of deviations: 61810996677.5
[2025-06-04 05:53:39] 2025-06-04 03:47:57,730 | INFO     | mean x: 1749001987.5
[2025-06-04 05:53:39] 2025-06-04 03:47:57,730 | INFO     | mean y: 2441185.7123893807
[2025-06-04 05:53:39] 2025-06-04 03:47:57,730 | INFO     | -- intersect: -30201304929.216476
[2025-06-04 05:53:39] 2025-06-04 03:47:57,730 | INFO     | intersect: -30201304929.216476
[2025-06-04 05:53:39] 2025-06-04 03:47:57,731 | INFO     | chi2: 5.106869057290557
[2025-06-04 05:53:39] 2025-06-04 03:47:57,731 | INFO     | sum of square deviations: 3346927870.0
[2025-06-04 05:53:39] 2025-06-04 03:47:57,733 | INFO     | sum of deviations: 75083545494.99998
[2025-06-04 05:53:39] 2025-06-04 03:47:57,733 | INFO     | mean x: 1749001835.0
[2025-06-04 05:53:39] 2025-06-04 03:47:57,733 | INFO     | mean y: 2449721.180995475
[2025-06-04 05:53:39] 2025-06-04 03:47:57,733 | INFO     | -- intersect: -39233907902.82151
[2025-06-04 05:53:39] 2025-06-04 03:47:57,733 | INFO     | intersect: -39233907902.82151
[2025-06-04 05:53:39] 2025-06-04 03:47:57,734 | INFO     | chi2: 4.374450603784678
[2025-06-04 05:53:39] 2025-06-04 03:47:57,734 | INFO     | current chi2=4.374450603784678 (change=14.341829510202142 %)
[2025-06-04 05:53:39] 2025-06-04 03:47:57,734 | INFO     | right removable region: 220
[2025-06-04 05:53:39] 2025-06-04 03:47:57,734 | INFO     | sum of square deviations: 3346927870.0
[2025-06-04 05:53:39] 2025-06-04 03:47:57,736 | INFO     | sum of deviations: -8789691909.999998
[2025-06-04 05:53:39] 2025-06-04 03:47:57,736 | INFO     | mean x: 1749002140.0
[2025-06-04 05:53:39] 2025-06-04 03:47:57,736 | INFO     | mean y: 2487434.6606334844
[2025-06-04 05:53:39] 2025-06-04 03:47:57,736 | INFO     | -- intersect: 4595711596.533797
[2025-06-04 05:53:39] 2025-06-04 03:47:57,736 | INFO     | intersect: 4595711596.533797
[2025-06-04 05:53:39] 2025-06-04 03:47:57,737 | INFO     | chi2: 1.2377616394437096
[2025-06-04 05:53:39] 2025-06-04 03:47:57,737 | INFO     | current chi2=1.2377616394437096 (change=75.76280837518865 %)
[2025-06-04 05:53:39] 2025-06-04 03:47:57,737 | INFO     | sum of square deviations: 3124858590.0
[2025-06-04 05:53:39] 2025-06-04 03:47:57,739 | INFO     | sum of deviations: -24830601501.0
[2025-06-04 05:53:39] 2025-06-04 03:47:57,740 | INFO     | mean x: 1749002292.5
[2025-06-04 05:53:39] 2025-06-04 03:47:57,740 | INFO     | mean y: 2498335.138888889
[2025-06-04 05:53:39] 2025-06-04 03:47:57,740 | INFO     | -- intersect: 13900336492.80187
[2025-06-04 05:53:39] 2025-06-04 03:47:57,740 | INFO     | intersect: 13900336492.80187
[2025-06-04 05:53:39] 2025-06-04 03:47:57,740 | INFO     | chi2: 0.8904992924463828
[2025-06-04 05:53:39] 2025-06-04 03:47:57,740 | INFO     | current chi2=0.8904992924463828 (change=28.055672104477065 %)
[2025-06-04 05:53:39] 2025-06-04 03:47:57,741 | INFO     | sum of square deviations: 2912836010.0
[2025-06-04 05:53:39] 2025-06-04 03:47:57,742 | INFO     | sum of deviations: -23655950304.0
[2025-06-04 05:53:39] 2025-06-04 03:47:57,743 | INFO     | mean x: 1749002445.0
[2025-06-04 05:53:39] 2025-06-04 03:47:57,743 | INFO     | mean y: 2497452.4265402844
[2025-06-04 05:53:39] 2025-06-04 03:47:57,743 | INFO     | -- intersect: 14206632109.665447
[2025-06-04 05:53:39] 2025-06-04 03:47:57,743 | INFO     | intersect: 14206632109.665447
[2025-06-04 05:53:39] 2025-06-04 03:47:57,743 | INFO     | chi2: 0.8758783335155094
[2025-06-04 05:53:39] 2025-06-04 03:47:57,744 | INFO     | current chi2=0.8758783335155094 (change=1.6418832732260462 %)
[2025-06-04 05:53:39] 2025-06-04 03:47:57,744 | INFO     | left removable region: 30
[2025-06-04 05:53:39] 2025-06-04 03:47:57,744 | INFO     | sum of square deviations: 2126802667.5
[2025-06-04 05:53:39] 2025-06-04 03:47:57,746 | INFO     | sum of deviations: 4074048754.5000005
[2025-06-04 05:53:39] 2025-06-04 03:47:57,746 | INFO     | mean x: 1749002719.5
[2025-06-04 05:53:39] 2025-06-04 03:47:57,746 | INFO     | mean y: 2496960.4684210527
[2025-06-04 05:53:39] 2025-06-04 03:47:57,746 | INFO     | -- intersect: -3347847883.405576
[2025-06-04 05:53:39] 2025-06-04 03:47:57,746 | INFO     | intersect: -3347847883.405576
[2025-06-04 05:53:39] 2025-06-04 03:47:57,747 | INFO     | chi2: 0.000880210777040775
[2025-06-04 05:53:39] 2025-06-04 03:47:57,747 | INFO     | -- intersect: -3347847883.405576
[2025-06-04 05:53:39] 2025-06-04 03:47:57,747 | INFO     | current memory leak: 1.92 B/s (using 190 data points, chi2=0.00)
[2025-06-04 05:53:39] 2025-06-04 03:47:57,748 | INFO     | ..............................
[2025-06-04 05:53:39] 2025-06-04 03:47:57,748 | INFO     | . Timing measurements:
[2025-06-04 05:53:39] 2025-06-04 03:47:57,748 | INFO     | . get job = 0 s
[2025-06-04 05:53:39] 2025-06-04 03:47:57,748 | INFO     | . initial setup = 7 s
[2025-06-04 05:53:39] 2025-06-04 03:47:57,748 | INFO     | . payload setup = 124 s
[2025-06-04 05:53:39] 2025-06-04 03:47:57,748 | INFO     | . stage-in = 0 s
[2025-06-04 05:53:39] 2025-06-04 03:47:57,748 | INFO     | . payload execution = 13884 s
[2025-06-04 05:53:39] 2025-06-04 03:47:57,748 | INFO     | . stage-out = 2 s
[2025-06-04 05:53:39] 2025-06-04 03:47:57,748 | INFO     | . log creation = 0 s
[2025-06-04 05:53:39] 2025-06-04 03:47:57,748 | INFO     | ..............................
[2025-06-04 05:53:39] 2025-06-04 03:47:57,886 | INFO     | 
[2025-06-04 05:53:39] 2025-06-04 03:47:57,887 | INFO     | job summary report
[2025-06-04 05:53:39] 2025-06-04 03:47:57,887 | INFO     | --------------------------------------------------
[2025-06-04 05:53:39] 2025-06-04 03:47:57,887 | INFO     | PanDA job id: 6677676588
[2025-06-04 05:53:39] 2025-06-04 03:47:57,887 | INFO     | task id: 45006595
[2025-06-04 05:53:39] 2025-06-04 03:47:57,887 | INFO     | errors: (none)
[2025-06-04 05:53:39] 2025-06-04 03:47:57,887 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 05:53:39] 2025-06-04 03:47:57,887 | INFO     | pilot state: finished 
[2025-06-04 05:53:39] 2025-06-04 03:47:57,888 | INFO     | transexitcode: 0
[2025-06-04 05:53:39] 2025-06-04 03:47:57,888 | INFO     | exeerrorcode: 0
[2025-06-04 05:53:39] 2025-06-04 03:47:57,888 | INFO     | exeerrordiag: 
[2025-06-04 05:53:39] 2025-06-04 03:47:57,888 | INFO     | exitcode: 0
[2025-06-04 05:53:39] 2025-06-04 03:47:57,888 | INFO     | exitmsg: OK
[2025-06-04 05:53:39] 2025-06-04 03:47:57,888 | INFO     | cpuconsumptiontime: 50779 s
[2025-06-04 05:53:39] 2025-06-04 03:47:57,888 | INFO     | nevents: 400
[2025-06-04 05:53:39] 2025-06-04 03:47:57,888 | INFO     | neventsw: 0
[2025-06-04 05:53:39] 2025-06-04 03:47:57,888 | INFO     | pid: 26653
[2025-06-04 05:53:39] 2025-06-04 03:47:57,888 | INFO     | pgrp: 26653
[2025-06-04 05:53:39] 2025-06-04 03:47:57,888 | INFO     | corecount: 8
[2025-06-04 05:53:39] 2025-06-04 03:47:57,889 | INFO     | event service: False
[2025-06-04 05:53:39] 2025-06-04 03:47:57,889 | INFO     | sizes: {0: 2405012, 1: 2405211, 12: 2405211, 23: 2405239, 33: 2405267, 44: 2405323, 55: 2405479, 65: 2405507, 76: 2405535, 87: 2405591, 93: 2405825, 98: 2406133, 1
[2025-06-04 05:53:39] 2025-06-04 03:47:57,889 | INFO     | --------------------------------------------------
[2025-06-04 05:53:39] 2025-06-04 03:47:57,889 | INFO     | 
[2025-06-04 05:53:39] 2025-06-04 03:47:57,889 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-06-04 05:53:39] 2025-06-04 03:47:57,921 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 05:53:39] 2025-06-04 03:47:57,921 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 05:53:39] 2025-06-04 03:47:57,921 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 05:53:39] 2025-06-04 03:47:57,921 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 05:53:39] 2025-06-04 03:47:57,921 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 05:53:39] 2025-06-04 03:47:57,922 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 05:53:39] 2025-06-04 03:47:57,922 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 05:53:39] 2025-06-04 03:47:57,922 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 05:53:39] 2025-06-04 03:47:57,922 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 05:53:39] 2025-06-04 03:47:57,922 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 05:53:39] 2025-06-04 03:47:57,922 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 05:53:39] 2025-06-04 03:47:57,922 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 05:53:39] 2025-06-04 03:47:57,922 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 05:53:39] 2025-06-04 03:47:57,922 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 05:53:39] 2025-06-04 03:47:57,923 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 05:53:39] 2025-06-04 03:47:57,923 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 05:53:39] 2025-06-04 03:47:57,923 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 05:53:39] 2025-06-04 03:47:57,923 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 05:53:39] 2025-06-04 03:47:57,923 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 05:53:39] 2025-06-04 03:47:57,923 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 05:53:39] 2025-06-04 03:47:57,923 | INFO     | job 6677676588 has completed (purged errors)
[2025-06-04 05:53:39] 2025-06-04 03:47:57,923 | INFO     | overall cleanup function is called
[2025-06-04 05:53:39] 2025-06-04 03:47:58,933 | INFO     | --- collectZombieJob: --- 10, [26653]
[2025-06-04 05:53:39] 2025-06-04 03:47:58,933 | INFO     | zombie collector waiting for pid 26653
[2025-06-04 05:53:39] 2025-06-04 03:47:58,933 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 05:53:39] 2025-06-04 03:47:58,933 | INFO     | collected zombie processes
[2025-06-04 05:53:39] 2025-06-04 03:47:58,933 | INFO     | will attempt to kill all subprocesses of pid=26653
[2025-06-04 05:53:39] 2025-06-04 03:47:59,052 | INFO     | process IDs to be killed: [26653] (in reverse order)
[2025-06-04 05:53:39] 2025-06-04 03:47:59,364 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 05:53:39] 2025-06-04 03:47:59,365 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 05:53:39] 2025-06-04 03:47:59,368 | INFO     | did not find any defunct processes belonging to 26653
[2025-06-04 05:53:39] 2025-06-04 03:47:59,372 | INFO     | did not find any defunct processes belonging to 26653
[2025-06-04 05:53:39] 2025-06-04 03:47:59,372 | INFO     | ready for new job
[2025-06-04 05:53:39] 2025-06-04 03:47:59,372 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 05:53:39] 2025-06-04 03:47:59,374 | INFO     | **************************************
[2025-06-04 05:53:39] 2025-06-04 03:47:59,374 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 05:53:39] 2025-06-04 03:47:59,375 | INFO     | **************************************
[2025-06-04 05:53:39] 2025-06-04 03:47:59,375 | INFO     | 
[2025-06-04 05:53:39] 2025-06-04 03:47:59,375 | INFO     | pilot is running in a VM
[2025-06-04 05:53:39] 2025-06-04 03:47:59,375 | INFO     | architecture information:
[2025-06-04 05:53:39] 2025-06-04 03:47:59,376 | INFO     | executing command: cat /etc/os-release
[2025-06-04 05:53:39] 2025-06-04 03:47:59,399 | INFO     | cat /etc/os-release:
[2025-06-04 05:53:39] NAME="CentOS Linux"
[2025-06-04 05:53:39] VERSION="7 (Core)"
[2025-06-04 05:53:39] ID="centos"
[2025-06-04 05:53:39] ID_LIKE="rhel fedora"
[2025-06-04 05:53:39] VERSION_ID="7"
[2025-06-04 05:53:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 05:53:39] ANSI_COLOR="0;31"
[2025-06-04 05:53:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 05:53:39] HOME_URL="https://www.centos.org/"
[2025-06-04 05:53:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 05:53:39] 
[2025-06-04 05:53:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 05:53:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 05:53:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 05:53:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 05:53:39] 
[2025-06-04 05:53:39] 2025-06-04 03:47:59,400 | INFO     | **************************************
[2025-06-04 05:53:39] 2025-06-04 03:47:59,904 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-06-04 05:53:39] 2025-06-04 03:47:59,949 | INFO     | sufficient remaining disk space (496801677312 B)
[2025-06-04 05:53:39] 2025-06-04 03:47:59,949 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 05:53:39] 2025-06-04 03:47:59,949 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 05:53:39] 2025-06-04 03:47:59,949 | INFO     | update_server=False
[2025-06-04 05:53:39] 2025-06-04 03:47:59,949 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 05:53:39] 2025-06-04 03:47:59,950 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 05:53:39] 2025-06-04 03:47:59,951 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:53:39] 2025-06-04 03:47:59,951 | INFO     | aborting loop
[2025-06-04 05:53:39] 2025-06-04 03:48:00,258 | INFO     | all job control threads have been joined
[2025-06-04 05:53:39] 2025-06-04 03:48:00,319 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 05:53:39] 2025-06-04 03:48:00,319 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 05:53:39] 2025-06-04 03:48:00,319 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 05:53:39] 2025-06-04 03:48:00,439 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 05:53:39] 2025-06-04 03:48:00,700 | INFO     | all data control threads have been joined
[2025-06-04 05:53:39] 2025-06-04 03:48:00,957 | INFO     | [job] job monitor thread has finished
[2025-06-04 05:53:39] 2025-06-04 03:48:00,958 | INFO     | [job] retrieve thread has finished
[2025-06-04 05:53:39] 2025-06-04 03:48:01,123 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 05:53:39] 2025-06-04 03:48:01,142 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 05:53:39] 2025-06-04 03:48:01,264 | INFO     | [job] control thread has finished
[2025-06-04 05:53:39] 2025-06-04 03:48:01,392 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 05:53:39] 2025-06-04 03:48:01,450 | INFO     | all payload control threads have been joined
[2025-06-04 05:53:39] 2025-06-04 03:48:01,495 | INFO     | [data] copytool_in thread has finished
[2025-06-04 05:53:39] 2025-06-04 03:48:01,541 | INFO     | [payload] validate_post thread has finished
[2025-06-04 05:53:39] 2025-06-04 03:48:01,651 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 05:53:39] 2025-06-04 03:48:01,680 | INFO     | [job] validate thread has finished
[2025-06-04 05:53:39] 2025-06-04 03:48:01,706 | INFO     | [data] control thread has finished
[2025-06-04 05:53:39] 2025-06-04 03:48:02,445 | INFO     | [data] copytool_out thread has finished
[2025-06-04 05:53:39] 2025-06-04 03:48:02,455 | INFO     | [payload] control thread has finished
[2025-06-04 05:53:39] 2025-06-04 03:48:02,474 | INFO     | [payload] failed_post thread has finished
[2025-06-04 05:53:39] 2025-06-04 03:48:02,899 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:53:39] 2025-06-04 03:48:03,905 | INFO     | [job] queue monitor thread has finished
[2025-06-04 05:53:39] 2025-06-04 03:48:03,958 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 05:53:39] 2025-06-04 03:48:04,785 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140351461979968)>', '<ExcThread(monitor, started 140350731577088)>']
[2025-06-04 05:53:39] 2025-06-04 03:48:05,349 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 05:53:39] 2025-06-04 03:48:05,349 | INFO     | [monitor] control thread has ended
[2025-06-04 05:53:39] 2025-06-04 03:48:09,811 | INFO     | all workflow threads have been joined
[2025-06-04 05:53:39] 2025-06-04 03:48:09,811 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 05:53:39] 2025-06-04 03:48:09,811 | INFO     | traces error code: 0
[2025-06-04 05:53:39] 2025-06-04 03:48:09,812 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 05:53:39] 2025-06-04 03:48:10,055 [wrapper] ==== pilot stdout END ====
[2025-06-04 05:53:39] 2025-06-04 03:48:10,061 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 05:53:39] 2025-06-04 03:48:10,078 [wrapper] pilotpid: 18078
[2025-06-04 05:53:39] 2025-06-04 03:48:10,084 [wrapper] Pilot exit status: 0
[2025-06-04 05:53:39] 2025-06-04 03:48:10,399 [wrapper] pandaids: 6677676588
[2025-06-04 05:53:39] 2025-06-04 03:48:11,069 [wrapper] cleanup supervisor_pilot  4820 18079
[2025-06-04 05:53:39] 2025-06-04 03:48:11,174 [wrapper] Test setup, not cleaning
[2025-06-04 05:53:39] 2025-06-04 03:48:11,282 [wrapper] apfmon messages muted
[2025-06-04 05:53:39] 2025-06-04 03:48:11,366 [wrapper] ==== wrapper stdout END ====
[2025-06-04 05:53:39] 2025-06-04 03:48:11,441 [wrapper] ==== wrapper stderr END ====
[2025-06-04 05:53:39]  *** Error codes and diagnostics ***
[2025-06-04 05:53:39]     "exeErrorCode": 0,
[2025-06-04 05:53:39]     "exeErrorDiag": "",
[2025-06-04 05:53:39]     "pilotErrorCode": 0,
[2025-06-04 05:53:39]     "pilotErrorDiag": "",
[2025-06-04 05:53:39]  *** Listing of results directory ***
[2025-06-04 05:53:39] total 395444
[2025-06-04 05:53:39] -rw-r--r--. 1 boinc boinc    495897 Jun  3 16:52 pilot3.tar.gz
[2025-06-04 05:53:39] -rwx------. 1 boinc boinc     37140 Jun  3 17:15 runpilot2-wrapper.sh
[2025-06-04 05:53:39] -rw-r--r--. 1 boinc boinc      5111 Jun  3 17:15 queuedata.json
[2025-06-04 05:53:39] -rw-r--r--. 1 boinc boinc       100 Jun  4 01:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 05:53:39] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 01:47 run_atlas
[2025-06-04 05:53:39] -rw-r--r--. 1 boinc boinc       105 Jun  4 01:47 job.xml
[2025-06-04 05:53:39] -rw-r--r--. 2 boinc boinc 215022739 Jun  4 01:47 EVNT.45006593._001474.pool.root.1
[2025-06-04 05:53:39] -rw-r--r--. 2 boinc boinc     15093 Jun  4 01:47 start_atlas.sh
[2025-06-04 05:53:39] drwxrwx--x. 2 boinc boinc        68 Jun  4 01:47 shared
[2025-06-04 05:53:39] -rw-r--r--. 2 boinc boinc    508877 Jun  4 01:47 input.tar.gz
[2025-06-04 05:53:39] -rw-r--r--. 1 boinc boinc      6393 Jun  4 01:47 init_data.xml
[2025-06-04 05:53:39] -rw-r--r--. 1 boinc boinc         0 Jun  4 01:47 boinc_lockfile
[2025-06-04 05:53:39] -rw-r--r--. 1 boinc boinc      2524 Jun  4 01:47 pandaJob.out
[2025-06-04 05:53:39] -rw-------. 1 boinc boinc    986077 Jun  4 01:50 agis_schedconf.cvmfs.json
[2025-06-04 05:53:39] drwx------. 4 boinc boinc      4096 Jun  4 01:51 pilot3
[2025-06-04 05:53:39] -rw-------. 1 boinc boinc 182929916 Jun  4 05:46 HITS.45006595._036678.pool.root.1
[2025-06-04 05:53:39] -rw-r--r--. 1 boinc boinc       531 Jun  4 05:47 boinc_task_state.xml
[2025-06-04 05:53:39] -rw-------. 1 boinc boinc        95 Jun  4 05:47 pilot_heartbeat.json
[2025-06-04 05:53:39] -rw-------. 1 boinc boinc      1017 Jun  4 05:47 memory_monitor_summary.json
[2025-06-04 05:53:39] -rw-------. 1 boinc boinc   1603667 Jun  4 05:47 agis_ddmendpoints.agis.ALL.json
[2025-06-04 05:53:39] -rw-------. 1 boinc boinc    371935 Jun  4 05:47 log.45006595._036678.job.log.tgz.1
[2025-06-04 05:53:39] -rw-------. 1 boinc boinc      7688 Jun  4 05:47 heartbeat.json
[2025-06-04 05:53:39] -rw-------. 1 boinc boinc      4417 Jun  4 05:48 pilotlog.txt
[2025-06-04 05:53:39] -rw-------. 1 boinc boinc   1211285 Jun  4 05:48 log.45006595._036678.job.log.1
[2025-06-04 05:53:39] -rw-------. 1 boinc boinc       357 Jun  4 05:48 output.list
[2025-06-04 05:53:39] -rw-r--r--. 1 boinc boinc       620 Jun  4 05:48 runtime_log
[2025-06-04 05:53:39] -rw-------. 1 boinc boinc   1597440 Jun  4 05:48 result.tar.gz
[2025-06-04 05:53:39] -rw-r--r--. 1 boinc boinc      8673 Jun  4 05:48 runtime_log.err
[2025-06-04 05:53:39] -rw-------. 1 boinc boinc       656 Jun  4 05:48 d6FODmHXig7n9Rq4apOajLDm4fhM0noT9bVof3QYDmH2YKDmPtWQwn.diag
[2025-06-04 05:53:39] -rw-r--r--. 1 boinc boinc      8192 Jun  4 05:53 boinc_mmap_file
[2025-06-04 05:53:39] -rw-r--r--. 1 boinc boinc        28 Jun  4 05:53 wrapper_checkpoint.txt
[2025-06-04 05:53:39] -rw-r--r--. 1 boinc boinc     20532 Jun  4 05:53 stderr.txt
[2025-06-04 05:53:39] HITS file was successfully produced:
[2025-06-04 05:53:39] -rw-------. 1 boinc boinc 182929916 Jun  4 05:46 shared/HITS.pool.root.1
[2025-06-04 05:53:39]  *** Contents of shared directory: ***
[2025-06-04 05:53:39] total 390704
[2025-06-04 05:53:39] -rw-r--r--. 2 boinc boinc 215022739 Jun  4 01:47 ATLAS.root_0
[2025-06-04 05:53:39] -rw-r--r--. 2 boinc boinc     15093 Jun  4 01:47 start_atlas.sh
[2025-06-04 05:53:39] -rw-r--r--. 2 boinc boinc    508877 Jun  4 01:47 input.tar.gz
[2025-06-04 05:53:39] -rw-------. 1 boinc boinc 182929916 Jun  4 05:46 HITS.pool.root.1
[2025-06-04 05:53:39] -rw-------. 1 boinc boinc   1597440 Jun  4 05:48 result.tar.gz
05:53:41 (12281): run_atlas exited; CPU time 50977.100357
05:53:41 (12281): called boinc_finish(0)

</stderr_txt>
]]>

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