Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
22:21:57 (1501810): wrapper (7.7.26015): starting
22:21:57 (1501810): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 22:21:57] Arguments: --nthreads 12
[2025-06-05 22:21:57] Threads: 12
[2025-06-05 22:21:57] Checking for CVMFS
[2025-06-05 22:21:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 22:21:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 22:21:58] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 22:22:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 22:22:00] 2.12.7.0 359462 3653 63344 146835 0 55 2593211 4096000 912 130560 0 3073917 99.991 870882 129 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-05 22:22:00] CVMFS is ok
[2025-06-05 22:22:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 22:22:00] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-05 22:22:00] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-05 22:22:00] Further information can be found at the LHC@home message board.
[2025-06-05 22:22:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 22:22:00] Checking for apptainer binary...
[2025-06-05 22:22:00] apptainer is not installed, using version from CVMFS
[2025-06-05 22:22:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 22:22:00] ggg3250
[2025-06-05 22:22:00] apptainer works
[2025-06-05 22:22:00] Set ATHENA_PROC_NUMBER=12
[2025-06-05 22:22:00] Set ATHENA_CORE_NUMBER=12
[2025-06-05 22:22:00] Starting ATLAS job with PandaID=6677675724
[2025-06-05 22:22:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 02:31:40]  *** The last 200 lines of the pilot log: ***
[2025-06-06 02:31:40] 2025-06-06 02:31:19,627 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 02:31:40] 2025-06-06 02:31:19,627 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 02:31:40] 2025-06-06 02:31:19,627 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 02:31:40] 2025-06-06 02:31:19,629 | INFO     | fitting pss+swap vs Time
[2025-06-06 02:31:40] 2025-06-06 02:31:19,630 | INFO     | sum of square deviations: 4340323240.0
[2025-06-06 02:31:40] 2025-06-06 02:31:19,635 | INFO     | sum of deviations: 25061286420.99996
[2025-06-06 02:31:40] 2025-06-06 02:31:19,635 | INFO     | mean x: 1749169647.0
[2025-06-06 02:31:40] 2025-06-06 02:31:19,635 | INFO     | mean y: 2656947.79253112
[2025-06-06 02:31:40] 2025-06-06 02:31:19,635 | INFO     | -- intersect: -10097153388.542326
[2025-06-06 02:31:40] 2025-06-06 02:31:19,635 | INFO     | intersect: -10097153388.542326
[2025-06-06 02:31:40] 2025-06-06 02:31:19,635 | INFO     | chi2: 4.552471549943521
[2025-06-06 02:31:40] 2025-06-06 02:31:19,635 | INFO     | sum of square deviations: 4075741535.0
[2025-06-06 02:31:40] 2025-06-06 02:31:19,636 | INFO     | sum of deviations: 41103682917.49999
[2025-06-06 02:31:40] 2025-06-06 02:31:19,636 | INFO     | mean x: 1749169494.5
[2025-06-06 02:31:40] 2025-06-06 02:31:19,636 | INFO     | mean y: 2666036.444915254
[2025-06-06 02:31:40] 2025-06-06 02:31:19,636 | INFO     | -- intersect: -17637635158.682693
[2025-06-06 02:31:40] 2025-06-06 02:31:19,636 | INFO     | intersect: -17637635158.682693
[2025-06-06 02:31:40] 2025-06-06 02:31:19,637 | INFO     | chi2: 3.8754104655293897
[2025-06-06 02:31:40] 2025-06-06 02:31:19,637 | INFO     | current chi2=3.8754104655293897 (change=14.87238474719366 %)
[2025-06-06 02:31:40] 2025-06-06 02:31:19,637 | INFO     | right removable region: 235
[2025-06-06 02:31:40] 2025-06-06 02:31:19,637 | INFO     | sum of square deviations: 4075741535.0
[2025-06-06 02:31:40] 2025-06-06 02:31:19,638 | INFO     | sum of deviations: -44741058353.0
[2025-06-06 02:31:40] 2025-06-06 02:31:19,638 | INFO     | mean x: 1749169799.5
[2025-06-06 02:31:40] 2025-06-06 02:31:19,638 | INFO     | mean y: 2697073.025423729
[2025-06-06 02:31:40] 2025-06-06 02:31:19,638 | INFO     | -- intersect: 19204039306.503143
[2025-06-06 02:31:40] 2025-06-06 02:31:19,638 | INFO     | intersect: 19204039306.503143
[2025-06-06 02:31:40] 2025-06-06 02:31:19,638 | INFO     | chi2: 1.6107103387604442
[2025-06-06 02:31:40] 2025-06-06 02:31:19,638 | INFO     | current chi2=1.6107103387604442 (change=64.61899166002635 %)
[2025-06-06 02:31:40] 2025-06-06 02:31:19,638 | INFO     | sum of square deviations: 3822136780.0
[2025-06-06 02:31:40] 2025-06-06 02:31:19,643 | INFO     | sum of deviations: -68418091782.0
[2025-06-06 02:31:40] 2025-06-06 02:31:19,643 | INFO     | mean x: 1749169952.0
[2025-06-06 02:31:40] 2025-06-06 02:31:19,643 | INFO     | mean y: 2711241.6406926406
[2025-06-06 02:31:40] 2025-06-06 02:31:19,643 | INFO     | -- intersect: 31313697008.67872
[2025-06-06 02:31:40] 2025-06-06 02:31:19,643 | INFO     | intersect: 31313697008.67872
[2025-06-06 02:31:40] 2025-06-06 02:31:19,643 | INFO     | chi2: 1.16320579182354
[2025-06-06 02:31:40] 2025-06-06 02:31:19,644 | INFO     | current chi2=1.16320579182354 (change=27.783055473604946 %)
[2025-06-06 02:31:40] 2025-06-06 02:31:19,644 | INFO     | sum of square deviations: 3579276412.5
[2025-06-06 02:31:40] 2025-06-06 02:31:19,644 | INFO     | sum of deviations: -75663699537.0
[2025-06-06 02:31:40] 2025-06-06 02:31:19,644 | INFO     | mean x: 1749170104.5
[2025-06-06 02:31:40] 2025-06-06 02:31:19,645 | INFO     | mean y: 2715772.690265487
[2025-06-06 02:31:40] 2025-06-06 02:31:19,645 | INFO     | -- intersect: 36979094787.11512
[2025-06-06 02:31:40] 2025-06-06 02:31:19,645 | INFO     | intersect: 36979094787.11512
[2025-06-06 02:31:40] 2025-06-06 02:31:19,645 | INFO     | chi2: 1.0897525081626953
[2025-06-06 02:31:40] 2025-06-06 02:31:19,645 | INFO     | current chi2=1.0897525081626953 (change=6.314728157060927 %)
[2025-06-06 02:31:40] 2025-06-06 02:31:19,645 | INFO     | left removable region: 30
[2025-06-06 02:31:40] 2025-06-06 02:31:19,645 | INFO     | sum of square deviations: 2671343110.0
[2025-06-06 02:31:40] 2025-06-06 02:31:19,646 | INFO     | sum of deviations: -41336711793.0
[2025-06-06 02:31:40] 2025-06-06 02:31:19,646 | INFO     | mean x: 1749170379.0
[2025-06-06 02:31:40] 2025-06-06 02:31:19,646 | INFO     | mean y: 2714237.575609756
[2025-06-06 02:31:40] 2025-06-06 02:31:19,646 | INFO     | -- intersect: 27069604882.549923
[2025-06-06 02:31:40] 2025-06-06 02:31:19,646 | INFO     | intersect: 27069604882.549923
[2025-06-06 02:31:40] 2025-06-06 02:31:19,646 | INFO     | chi2: 0.2857495573546579
[2025-06-06 02:31:40] 2025-06-06 02:31:19,646 | INFO     | -- intersect: 27069604882.549923
[2025-06-06 02:31:40] 2025-06-06 02:31:19,646 | INFO     | current memory leak: -15.47 B/s (using 205 data points, chi2=0.29)
[2025-06-06 02:31:40] 2025-06-06 02:31:19,650 | INFO     | ..............................
[2025-06-06 02:31:40] 2025-06-06 02:31:19,651 | INFO     | . Timing measurements:
[2025-06-06 02:31:40] 2025-06-06 02:31:19,651 | INFO     | . get job = 0 s
[2025-06-06 02:31:40] 2025-06-06 02:31:19,651 | INFO     | . initial setup = 6 s
[2025-06-06 02:31:40] 2025-06-06 02:31:19,651 | INFO     | . payload setup = 60 s
[2025-06-06 02:31:40] 2025-06-06 02:31:19,651 | INFO     | . stage-in = 0 s
[2025-06-06 02:31:40] 2025-06-06 02:31:19,651 | INFO     | . payload execution = 14714 s
[2025-06-06 02:31:40] 2025-06-06 02:31:19,651 | INFO     | . stage-out = 3 s
[2025-06-06 02:31:40] 2025-06-06 02:31:19,651 | INFO     | . log creation = 1 s
[2025-06-06 02:31:40] 2025-06-06 02:31:19,651 | INFO     | ..............................
[2025-06-06 02:31:40] 2025-06-06 02:31:19,934 | INFO     | 
[2025-06-06 02:31:40] 2025-06-06 02:31:19,935 | INFO     | job summary report
[2025-06-06 02:31:40] 2025-06-06 02:31:19,935 | INFO     | --------------------------------------------------
[2025-06-06 02:31:40] 2025-06-06 02:31:19,935 | INFO     | PanDA job id: 6677675724
[2025-06-06 02:31:40] 2025-06-06 02:31:19,935 | INFO     | task id: 45006595
[2025-06-06 02:31:40] 2025-06-06 02:31:19,935 | INFO     | errors: (none)
[2025-06-06 02:31:40] 2025-06-06 02:31:19,935 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 02:31:40] 2025-06-06 02:31:19,935 | INFO     | pilot state: finished 
[2025-06-06 02:31:40] 2025-06-06 02:31:19,935 | INFO     | transexitcode: 0
[2025-06-06 02:31:40] 2025-06-06 02:31:19,935 | INFO     | exeerrorcode: 0
[2025-06-06 02:31:40] 2025-06-06 02:31:19,935 | INFO     | exeerrordiag: 
[2025-06-06 02:31:40] 2025-06-06 02:31:19,935 | INFO     | exitcode: 0
[2025-06-06 02:31:40] 2025-06-06 02:31:19,935 | INFO     | exitmsg: OK
[2025-06-06 02:31:40] 2025-06-06 02:31:19,935 | INFO     | cpuconsumptiontime: 22140 s
[2025-06-06 02:31:40] 2025-06-06 02:31:19,935 | INFO     | nevents: 400
[2025-06-06 02:31:40] 2025-06-06 02:31:19,935 | INFO     | neventsw: 0
[2025-06-06 02:31:40] 2025-06-06 02:31:19,935 | INFO     | pid: 1511814
[2025-06-06 02:31:40] 2025-06-06 02:31:19,935 | INFO     | pgrp: 1511814
[2025-06-06 02:31:40] 2025-06-06 02:31:19,935 | INFO     | corecount: 12
[2025-06-06 02:31:40] 2025-06-06 02:31:19,935 | INFO     | event service: False
[2025-06-06 02:31:40] 2025-06-06 02:31:19,935 | INFO     | sizes: {0: 2396514, 1: 2397222, 2: 2397421, 13: 2397421, 24: 2397477, 33: 2397711, 34: 2397895, 14778: 2428316, 14782: 2437359, 14834: 2437473}
[2025-06-06 02:31:40] 2025-06-06 02:31:19,936 | INFO     | --------------------------------------------------
[2025-06-06 02:31:40] 2025-06-06 02:31:19,936 | INFO     | 
[2025-06-06 02:31:40] 2025-06-06 02:31:19,936 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-06 02:31:40] 2025-06-06 02:31:19,955 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 02:31:40] 2025-06-06 02:31:19,955 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 02:31:40] 2025-06-06 02:31:19,955 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 02:31:40] 2025-06-06 02:31:19,955 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 02:31:40] 2025-06-06 02:31:19,955 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 02:31:40] 2025-06-06 02:31:19,955 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 02:31:40] 2025-06-06 02:31:19,955 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 02:31:40] 2025-06-06 02:31:19,955 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 02:31:40] 2025-06-06 02:31:19,955 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 02:31:40] 2025-06-06 02:31:19,955 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 02:31:40] 2025-06-06 02:31:19,955 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 02:31:40] 2025-06-06 02:31:19,955 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 02:31:40] 2025-06-06 02:31:19,955 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 02:31:40] 2025-06-06 02:31:19,955 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 02:31:40] 2025-06-06 02:31:19,955 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 02:31:40] 2025-06-06 02:31:19,955 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 02:31:40] 2025-06-06 02:31:19,956 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 02:31:40] 2025-06-06 02:31:19,956 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 02:31:40] 2025-06-06 02:31:19,956 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 02:31:40] 2025-06-06 02:31:19,956 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 02:31:40] 2025-06-06 02:31:19,956 | INFO     | job 6677675724 has completed (purged errors)
[2025-06-06 02:31:40] 2025-06-06 02:31:19,956 | INFO     | overall cleanup function is called
[2025-06-06 02:31:40] 2025-06-06 02:31:20,962 | INFO     | --- collectZombieJob: --- 10, [1511814]
[2025-06-06 02:31:40] 2025-06-06 02:31:20,963 | INFO     | zombie collector waiting for pid 1511814
[2025-06-06 02:31:40] 2025-06-06 02:31:20,963 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 02:31:40] 2025-06-06 02:31:20,963 | INFO     | collected zombie processes
[2025-06-06 02:31:40] 2025-06-06 02:31:20,963 | INFO     | will attempt to kill all subprocesses of pid=1511814
[2025-06-06 02:31:40] 2025-06-06 02:31:21,156 | INFO     | process IDs to be killed: [1511814] (in reverse order)
[2025-06-06 02:31:40] 2025-06-06 02:31:21,271 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 02:31:40] 2025-06-06 02:31:21,271 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 02:31:40] 2025-06-06 02:31:21,272 | INFO     | did not find any defunct processes belonging to 1511814
[2025-06-06 02:31:40] 2025-06-06 02:31:21,273 | INFO     | did not find any defunct processes belonging to 1511814
[2025-06-06 02:31:40] 2025-06-06 02:31:21,273 | INFO     | ready for new job
[2025-06-06 02:31:40] 2025-06-06 02:31:21,273 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 02:31:40] 2025-06-06 02:31:21,274 | INFO     | **************************************
[2025-06-06 02:31:40] 2025-06-06 02:31:21,274 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 02:31:40] 2025-06-06 02:31:21,283 | INFO     | **************************************
[2025-06-06 02:31:40] 2025-06-06 02:31:21,283 | INFO     | 
[2025-06-06 02:31:40] 2025-06-06 02:31:21,303 | INFO     | architecture information:
[2025-06-06 02:31:40] 2025-06-06 02:31:21,303 | INFO     | executing command: cat /etc/os-release
[2025-06-06 02:31:40] 2025-06-06 02:31:21,363 | INFO     | cat /etc/os-release:
[2025-06-06 02:31:40] NAME="CentOS Linux"
[2025-06-06 02:31:40] VERSION="7 (Core)"
[2025-06-06 02:31:40] ID="centos"
[2025-06-06 02:31:40] ID_LIKE="rhel fedora"
[2025-06-06 02:31:40] VERSION_ID="7"
[2025-06-06 02:31:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 02:31:40] ANSI_COLOR="0;31"
[2025-06-06 02:31:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 02:31:40] HOME_URL="https://www.centos.org/"
[2025-06-06 02:31:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 02:31:40] 
[2025-06-06 02:31:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 02:31:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 02:31:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 02:31:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 02:31:40] 
[2025-06-06 02:31:40] 2025-06-06 02:31:21,363 | INFO     | **************************************
[2025-06-06 02:31:40] 2025-06-06 02:31:21,867 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-06 02:31:40] 2025-06-06 02:31:21,987 | INFO     | sufficient remaining disk space (187989753856 B)
[2025-06-06 02:31:40] 2025-06-06 02:31:21,987 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 02:31:40] 2025-06-06 02:31:21,987 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 02:31:40] 2025-06-06 02:31:21,987 | INFO     | update_server=False
[2025-06-06 02:31:40] 2025-06-06 02:31:21,987 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 02:31:40] 2025-06-06 02:31:21,987 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 02:31:40] 2025-06-06 02:31:21,987 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 02:31:40] 2025-06-06 02:31:21,987 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 02:31:40] 2025-06-06 02:31:21,987 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 02:31:40] 2025-06-06 02:31:22,070 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 02:31:40] 2025-06-06 02:31:22,071 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 02:31:40] 2025-06-06 02:31:22,071 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 02:31:40] 2025-06-06 02:31:22,071 | INFO     | will abort loop
[2025-06-06 02:31:40] 2025-06-06 02:31:22,302 | INFO     | all payload control threads have been joined
[2025-06-06 02:31:40] 2025-06-06 02:31:22,326 | INFO     | all job control threads have been joined
[2025-06-06 02:31:40] 2025-06-06 02:31:22,406 | INFO     | all data control threads have been joined
[2025-06-06 02:31:40] 2025-06-06 02:31:22,991 | INFO     | [job] retrieve thread has finished
[2025-06-06 02:31:40] 2025-06-06 02:31:23,075 | INFO     | [job] job monitor thread has finished
[2025-06-06 02:31:40] 2025-06-06 02:31:23,146 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 02:31:40] 2025-06-06 02:31:23,311 | INFO     | [payload] control thread has finished
[2025-06-06 02:31:40] 2025-06-06 02:31:23,331 | INFO     | [job] control thread has finished
[2025-06-06 02:31:40] 2025-06-06 02:31:23,415 | INFO     | [data] control thread has finished
[2025-06-06 02:31:40] 2025-06-06 02:31:23,559 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 02:31:40] 2025-06-06 02:31:23,579 | INFO     | [job] validate thread has finished
[2025-06-06 02:31:40] 2025-06-06 02:31:23,579 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 02:31:40] 2025-06-06 02:31:23,662 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 02:31:40] 2025-06-06 02:31:23,902 | INFO     | [data] copytool_in thread has finished
[2025-06-06 02:31:40] 2025-06-06 02:31:23,999 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 02:31:40] 2025-06-06 02:31:24,166 | INFO     | [payload] failed_post thread has finished
[2025-06-06 02:31:40] 2025-06-06 02:31:24,518 | INFO     | [payload] validate_post thread has finished
[2025-06-06 02:31:40] 2025-06-06 02:31:24,782 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 02:31:40] 2025-06-06 02:31:25,155 | INFO     | [data] copytool_out thread has finished
[2025-06-06 02:31:40] 2025-06-06 02:31:25,786 | INFO     | [job] queue monitor thread has finished
[2025-06-06 02:31:40] 2025-06-06 02:31:27,678 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 02:31:40] 2025-06-06 02:31:32,222 | INFO     | job.realtimelogging is not enabled
[2025-06-06 02:31:40] 2025-06-06 02:31:33,226 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 02:31:40] 2025-06-06 02:31:34,570 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139695420991296)>', '<ExcThread(monitor, started 139695111513856)>']
[2025-06-06 02:31:40] 2025-06-06 02:31:35,046 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 02:31:40] 2025-06-06 02:31:35,047 | INFO     | [monitor] control thread has ended
[2025-06-06 02:31:40] 2025-06-06 02:31:39,598 | INFO     | all workflow threads have been joined
[2025-06-06 02:31:40] 2025-06-06 02:31:39,599 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 02:31:40] 2025-06-06 02:31:39,599 | INFO     | traces error code: 0
[2025-06-06 02:31:40] 2025-06-06 02:31:39,599 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 02:31:40] 2025-06-06 02:31:39,994 [wrapper] ==== pilot stdout END ====
[2025-06-06 02:31:40] 2025-06-06 02:31:40,015 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 02:31:40] 2025-06-06 02:31:40,063 [wrapper] pilotpid: 1505395
[2025-06-06 02:31:40] 2025-06-06 02:31:40,087 [wrapper] Pilot exit status: 0
[2025-06-06 02:31:40] 2025-06-06 02:31:40,199 [wrapper] pandaids: 6677675724
[2025-06-06 02:31:40] 2025-06-06 02:31:40,259 [wrapper] cleanup supervisor_pilot 1570235 1505396
[2025-06-06 02:31:40] 2025-06-06 02:31:40,275 [wrapper] Test setup, not cleaning
[2025-06-06 02:31:40] 2025-06-06 02:31:40,311 [wrapper] apfmon messages muted
[2025-06-06 02:31:40] 2025-06-06 02:31:40,332 [wrapper] ==== wrapper stdout END ====
[2025-06-06 02:31:40] 2025-06-06 02:31:40,359 [wrapper] ==== wrapper stderr END ====
[2025-06-06 02:31:40]  *** Error codes and diagnostics ***
[2025-06-06 02:31:40]     "exeErrorCode": 0,
[2025-06-06 02:31:40]     "exeErrorDiag": "",
[2025-06-06 02:31:40]     "pilotErrorCode": 0,
[2025-06-06 02:31:40]     "pilotErrorDiag": "",
[2025-06-06 02:31:40]  *** Listing of results directory ***
[2025-06-06 02:31:40] total 391236
[2025-06-06 02:31:40] -rw-r--r-- 1 boinc boinc    495897 Jun  3 14:52 pilot3.tar.gz
[2025-06-06 02:31:40] -rwx------ 1 boinc boinc     37140 Jun  3 14:52 runpilot2-wrapper.sh
[2025-06-06 02:31:40] -rw-r--r-- 1 boinc boinc      5111 Jun  3 14:52 queuedata.json
[2025-06-06 02:31:40] -rw-rw-r-- 1 boinc boinc       100 Jun  5 22:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 02:31:40] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 22:21 run_atlas
[2025-06-06 02:31:40] -rw-rw-r-- 1 boinc boinc       105 Jun  5 22:21 job.xml
[2025-06-06 02:31:40] -rw-rw-r-- 1 boinc boinc      9361 Jun  5 22:21 init_data.xml
[2025-06-06 02:31:40] -rw-r--r-- 2 boinc boinc 214539274 Jun  5 22:21 EVNT.45006593._001447.pool.root.1
[2025-06-06 02:31:40] -rw-r--r-- 2 boinc boinc     15093 Jun  5 22:21 start_atlas.sh
[2025-06-06 02:31:40] drwxrwx--x 2 boinc boinc      4096 Jun  5 22:21 shared
[2025-06-06 02:31:40] -rw-r--r-- 2 boinc boinc    508872 Jun  5 22:21 input.tar.gz
[2025-06-06 02:31:40] -rw-rw-r-- 1 boinc boinc         0 Jun  5 22:21 boinc_lockfile
[2025-06-06 02:31:40] -rw-rw-r-- 1 boinc boinc      2525 Jun  5 22:22 pandaJob.out
[2025-06-06 02:31:40] -rw------- 1 boinc boinc    987721 Jun  5 22:23 agis_schedconf.cvmfs.json
[2025-06-06 02:31:40] drwx------ 4 boinc boinc      4096 Jun  5 22:23 pilot3
[2025-06-06 02:31:40] -rw------- 1 boinc boinc 178535808 Jun  6 02:29 HITS.45006595._036024.pool.root.1
[2025-06-06 02:31:40] -rw-rw-r-- 1 boinc boinc       530 Jun  6 02:29 boinc_task_state.xml
[2025-06-06 02:31:40] -rw------- 1 boinc boinc      1020 Jun  6 02:30 memory_monitor_summary.json
[2025-06-06 02:31:40] -rw------- 1 boinc boinc        95 Jun  6 02:30 pilot_heartbeat.json
[2025-06-06 02:31:40] -rw------- 1 boinc boinc   1598969 Jun  6 02:30 agis_ddmendpoints.agis.ALL.json
[2025-06-06 02:31:40] -rw------- 1 boinc boinc    466363 Jun  6 02:30 log.45006595._036024.job.log.tgz.1
[2025-06-06 02:31:40] -rw------- 1 boinc boinc      7667 Jun  6 02:31 heartbeat.json
[2025-06-06 02:31:40] -rw-rw-r-- 1 boinc boinc      8192 Jun  6 02:31 boinc_mmap_file
[2025-06-06 02:31:40] -rw-rw-r-- 1 boinc boinc        28 Jun  6 02:31 wrapper_checkpoint.txt
[2025-06-06 02:31:40] -rw------- 1 boinc boinc      4758 Jun  6 02:31 pilotlog.txt
[2025-06-06 02:31:40] -rw------- 1 boinc boinc   1388573 Jun  6 02:31 log.45006595._036024.job.log.1
[2025-06-06 02:31:40] -rw------- 1 boinc boinc       357 Jun  6 02:31 output.list
[2025-06-06 02:31:40] -rw-rw-r-- 1 boinc boinc       620 Jun  6 02:31 runtime_log
[2025-06-06 02:31:40] -rw------- 1 boinc boinc   1873920 Jun  6 02:31 result.tar.gz
[2025-06-06 02:31:40] -rw-rw-r-- 1 boinc boinc      8959 Jun  6 02:31 runtime_log.err
[2025-06-06 02:31:40] -rw------- 1 boinc boinc       652 Jun  6 02:31 PJbKDm7Aig7n9Rq4apOajLDm4fhM0noT9bVof3QYDmJzYKDmqeezfm.diag
[2025-06-06 02:31:40] -rw-rw-r-- 1 boinc boinc     20977 Jun  6 02:31 stderr.txt
[2025-06-06 02:31:40] HITS file was successfully produced:
[2025-06-06 02:31:40] -rw------- 1 boinc boinc 178535808 Jun  6 02:29 shared/HITS.pool.root.1
[2025-06-06 02:31:40]  *** Contents of shared directory: ***
[2025-06-06 02:31:40] total 386220
[2025-06-06 02:31:40] -rw-r--r-- 2 boinc boinc 214539274 Jun  5 22:21 ATLAS.root_0
[2025-06-06 02:31:40] -rw-r--r-- 2 boinc boinc     15093 Jun  5 22:21 start_atlas.sh
[2025-06-06 02:31:40] -rw-r--r-- 2 boinc boinc    508872 Jun  5 22:21 input.tar.gz
[2025-06-06 02:31:40] -rw------- 1 boinc boinc 178535808 Jun  6 02:29 HITS.pool.root.1
[2025-06-06 02:31:40] -rw------- 1 boinc boinc   1873920 Jun  6 02:31 result.tar.gz
02:31:42 (1501810): run_atlas exited; CPU time 22199.986272
02:31:42 (1501810): called boinc_finish(0)

</stderr_txt>
]]>

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