Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:29:40 (3444862): wrapper (7.7.26015): starting
13:29:40 (3444862): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 13:29:40] Arguments: --nthreads 8
[2025-06-03 13:29:40] Threads: 8
[2025-06-03 13:29:40] Checking for CVMFS
[2025-06-03 13:29:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:29:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:29:40] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:29:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:29:41] 2.12.6.0 20986 112403 916792 146750 1 187 21364300 32935936 9233 130560 1 698487273 99.695 547496793 20325 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 13:29:41] CVMFS is ok
[2025-06-03 13:29:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 13:29:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 13:29:41] Further information can be found at the LHC@home message board.
[2025-06-03 13:29:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:29:41] Checking for apptainer binary...
[2025-06-03 13:29:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:29:41] Running /usr/bin/apptainer --version
[2025-06-03 13:29:41] apptainer version 1.4.1-1.el9
[2025-06-03 13:29:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:29:41] lc-10-10.aglt2.org
[2025-06-03 13:29:41] apptainer works
[2025-06-03 13:29:41] Set ATHENA_PROC_NUMBER=8
[2025-06-03 13:29:41] Set ATHENA_CORE_NUMBER=8
[2025-06-03 13:29:41] Starting ATLAS job with PandaID=6677393294
[2025-06-03 13:29:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 14:57:28]  *** The last 200 lines of the pilot log: ***
[2025-06-03 14:57:28]  lfn=log.45006595._008469.job.log.tgz.1
[2025-06-03 14:57:28]  mtime=0
[2025-06-03 14:57:28]  protocol_id=None
[2025-06-03 14:57:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 14:57:28]  replicas=None
[2025-06-03 14:57:28]  scope=mc23_13p6TeV
[2025-06-03 14:57:28]  status=None
[2025-06-03 14:57:28]  status_code=0
[2025-06-03 14:57:28]  storage_token=
[2025-06-03 14:57:28]  surl=/tmp/boinchome/slots/6/PanDA_Pilot-6677393294/log.45006595._008469.job.log.tgz.1
[2025-06-03 14:57:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d2/a9/log.45006595._008469.job.log.tgz.1
[2025-06-03 14:57:28]  workdir=None
[2025-06-03 14:57:28] ]
[2025-06-03 14:57:28] 2025-06-03 18:57:05,957 | INFO     | transferring file log.45006595._008469.job.log.tgz.1 from /tmp/boinchome/slots/6/PanDA_Pilot-6677393294/log.45006595._008469.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 14:57:28] 2025-06-03 18:57:05,957 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/6/PanDA_Pilot-6677393294/log.45006595._008469.job.log.tgz.1 /tmp/boinchome/slots/6/log.45006595._008469.job
[2025-06-03 14:57:28] 2025-06-03 18:57:05,974 | INFO     | adding to output.list: log.45006595._008469.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d2/a9/log.45006595._008469.job.log.tg
[2025-06-03 14:57:28] 2025-06-03 18:57:05,974 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 14:57:28] 2025-06-03 18:57:05,975 | INFO     | summary of transferred files:
[2025-06-03 14:57:28] 2025-06-03 18:57:05,975 | INFO     |  -- lfn=log.45006595._008469.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 14:57:28] 2025-06-03 18:57:05,975 | INFO     | stage-out finished correctly
[2025-06-03 14:57:28] 2025-06-03 18:57:07,055 | INFO     | monitor loop #365: job 0:6677393294 is in state 'finished'
[2025-06-03 14:57:28] 2025-06-03 18:57:07,055 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 14:57:28] 2025-06-03 18:57:08,623 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 14:57:28] 2025-06-03 18:57:09,558 | INFO     | monitor loop #366: job 0:6677393294 is in state 'finished'
[2025-06-03 14:57:28] 2025-06-03 18:57:09,559 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 14:57:28] 2025-06-03 18:57:11,443 | INFO     | job 6677393294 has state=finished
[2025-06-03 14:57:28] 2025-06-03 18:57:11,443 | INFO     | preparing for final server update for job 6677393294 in state='finished'
[2025-06-03 14:57:28] 2025-06-03 18:57:11,505 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-03 14:57:28] 2025-06-03 18:57:11,506 | INFO     | this job has now completed (state=finished)
[2025-06-03 14:57:28] 2025-06-03 18:57:11,506 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 14:57:28] 2025-06-03 18:57:11,506 | INFO     | log transfer has been attempted: DONE
[2025-06-03 14:57:28] 2025-06-03 18:57:11,506 | INFO     | job 6677393294 has finished - writing final server update
[2025-06-03 14:57:28] 2025-06-03 18:57:11,506 | INFO     | total number of processed events: 400 (read)
[2025-06-03 14:57:28] 2025-06-03 18:57:11,524 | INFO     | executing command: lscpu
[2025-06-03 14:57:28] 2025-06-03 18:57:11,601 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 14:57:28] 2025-06-03 18:57:12,062 | INFO     | monitor loop #367: job 0:6677393294 is in state 'finished'
[2025-06-03 14:57:28] 2025-06-03 18:57:12,062 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 14:57:28] 2025-06-03 18:57:14,566 | INFO     | monitor loop #368: job 0:6677393294 is in state 'finished'
[2025-06-03 14:57:28] 2025-06-03 18:57:14,566 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 14:57:28] 2025-06-03 18:57:15,699 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 14:57:28] 2025-06-03 18:57:15,699 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6677393294/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 14:57:28] 2025-06-03 18:57:15,699 | INFO     | extracted standard info from prmon json
[2025-06-03 14:57:28] 2025-06-03 18:57:15,700 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 14:57:28] 2025-06-03 18:57:15,700 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 14:57:28] 2025-06-03 18:57:15,700 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 14:57:28] 2025-06-03 18:57:15,700 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 14:57:28] 2025-06-03 18:57:15,701 | INFO     | fitting pss+swap vs Time
[2025-06-03 14:57:28] 2025-06-03 18:57:15,702 | INFO     | sum of square deviations: 152858680.0
[2025-06-03 14:57:28] 2025-06-03 18:57:15,702 | INFO     | sum of deviations: 9454912586.999998
[2025-06-03 14:57:28] 2025-06-03 18:57:15,702 | INFO     | mean x: 1748974498.0
[2025-06-03 14:57:28] 2025-06-03 18:57:15,702 | INFO     | mean y: 2100976.64556962
[2025-06-03 14:57:28] 2025-06-03 18:57:15,702 | INFO     | -- intersect: -108178873734.65118
[2025-06-03 14:57:28] 2025-06-03 18:57:15,702 | INFO     | intersect: -108178873734.65118
[2025-06-03 14:57:28] 2025-06-03 18:57:15,702 | INFO     | chi2: 0.9184581378163316
[2025-06-03 14:57:28] 2025-06-03 18:57:15,702 | INFO     | -- intersect: -108178873734.65118
[2025-06-03 14:57:28] 2025-06-03 18:57:15,703 | INFO     | current memory leak: 61.85 B/s (using 79 data points, chi2=0.92)
[2025-06-03 14:57:28] 2025-06-03 18:57:15,703 | INFO     | ..............................
[2025-06-03 14:57:28] 2025-06-03 18:57:15,703 | INFO     | . Timing measurements:
[2025-06-03 14:57:28] 2025-06-03 18:57:15,703 | INFO     | . get job = 0 s
[2025-06-03 14:57:28] 2025-06-03 18:57:15,703 | INFO     | . initial setup = 2 s
[2025-06-03 14:57:28] 2025-06-03 18:57:15,703 | INFO     | . payload setup = 5 s
[2025-06-03 14:57:28] 2025-06-03 18:57:15,703 | INFO     | . stage-in = 0 s
[2025-06-03 14:57:28] 2025-06-03 18:57:15,703 | INFO     | . payload execution = 5210 s
[2025-06-03 14:57:28] 2025-06-03 18:57:15,703 | INFO     | . stage-out = 0 s
[2025-06-03 14:57:28] 2025-06-03 18:57:15,704 | INFO     | . log creation = 0 s
[2025-06-03 14:57:28] 2025-06-03 18:57:15,704 | INFO     | ..............................
[2025-06-03 14:57:28] 2025-06-03 18:57:15,959 | INFO     | 
[2025-06-03 14:57:28] 2025-06-03 18:57:15,959 | INFO     | job summary report
[2025-06-03 14:57:28] 2025-06-03 18:57:15,959 | INFO     | --------------------------------------------------
[2025-06-03 14:57:28] 2025-06-03 18:57:15,959 | INFO     | PanDA job id: 6677393294
[2025-06-03 14:57:28] 2025-06-03 18:57:15,959 | INFO     | task id: 45006595
[2025-06-03 14:57:28] 2025-06-03 18:57:15,959 | INFO     | errors: (none)
[2025-06-03 14:57:28] 2025-06-03 18:57:15,959 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 14:57:28] 2025-06-03 18:57:15,959 | INFO     | pilot state: finished 
[2025-06-03 14:57:28] 2025-06-03 18:57:15,960 | INFO     | transexitcode: 0
[2025-06-03 14:57:28] 2025-06-03 18:57:15,960 | INFO     | exeerrorcode: 0
[2025-06-03 14:57:28] 2025-06-03 18:57:15,960 | INFO     | exeerrordiag: 
[2025-06-03 14:57:28] 2025-06-03 18:57:15,960 | INFO     | exitcode: 0
[2025-06-03 14:57:28] 2025-06-03 18:57:15,960 | INFO     | exitmsg: OK
[2025-06-03 14:57:28] 2025-06-03 18:57:15,960 | INFO     | cpuconsumptiontime: 33470 s
[2025-06-03 14:57:28] 2025-06-03 18:57:15,960 | INFO     | nevents: 400
[2025-06-03 14:57:28] 2025-06-03 18:57:15,960 | INFO     | neventsw: 0
[2025-06-03 14:57:28] 2025-06-03 18:57:15,960 | INFO     | pid: 3461956
[2025-06-03 14:57:28] 2025-06-03 18:57:15,960 | INFO     | pgrp: 3461956
[2025-06-03 14:57:28] 2025-06-03 18:57:15,960 | INFO     | corecount: 8
[2025-06-03 14:57:28] 2025-06-03 18:57:15,960 | INFO     | event service: False
[2025-06-03 14:57:28] 2025-06-03 18:57:15,960 | INFO     | sizes: {0: 2405177, 3: 2405383, 11: 2405411, 5220: 2431871, 5222: 2440812, 5224: 2440868, 5231: 2441166}
[2025-06-03 14:57:28] 2025-06-03 18:57:15,961 | INFO     | --------------------------------------------------
[2025-06-03 14:57:28] 2025-06-03 18:57:15,961 | INFO     | 
[2025-06-03 14:57:28] 2025-06-03 18:57:15,961 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-06-03 14:57:28] 2025-06-03 18:57:15,982 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 14:57:28] 2025-06-03 18:57:15,983 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 14:57:28] 2025-06-03 18:57:15,983 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 14:57:28] 2025-06-03 18:57:15,983 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 14:57:28] 2025-06-03 18:57:15,983 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 14:57:28] 2025-06-03 18:57:15,983 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 14:57:28] 2025-06-03 18:57:15,983 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 14:57:28] 2025-06-03 18:57:15,983 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 14:57:28] 2025-06-03 18:57:15,983 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 14:57:28] 2025-06-03 18:57:15,984 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 14:57:28] 2025-06-03 18:57:15,984 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 14:57:28] 2025-06-03 18:57:15,984 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 14:57:28] 2025-06-03 18:57:15,984 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 14:57:28] 2025-06-03 18:57:15,984 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 14:57:28] 2025-06-03 18:57:15,984 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 14:57:28] 2025-06-03 18:57:15,984 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 14:57:28] 2025-06-03 18:57:15,984 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 14:57:28] 2025-06-03 18:57:15,984 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 14:57:28] 2025-06-03 18:57:15,984 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 14:57:28] 2025-06-03 18:57:15,984 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 14:57:28] 2025-06-03 18:57:15,985 | INFO     | job 6677393294 has completed (purged errors)
[2025-06-03 14:57:28] 2025-06-03 18:57:15,985 | INFO     | overall cleanup function is called
[2025-06-03 14:57:28] 2025-06-03 18:57:16,993 | INFO     | --- collectZombieJob: --- 10, [3461956]
[2025-06-03 14:57:28] 2025-06-03 18:57:16,993 | INFO     | zombie collector waiting for pid 3461956
[2025-06-03 14:57:28] 2025-06-03 18:57:16,993 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 14:57:28] 2025-06-03 18:57:16,993 | INFO     | collected zombie processes
[2025-06-03 14:57:28] 2025-06-03 18:57:16,993 | INFO     | will attempt to kill all subprocesses of pid=3461956
[2025-06-03 14:57:28] 2025-06-03 18:57:17,466 | INFO     | process IDs to be killed: [3461956] (in reverse order)
[2025-06-03 14:57:28] 2025-06-03 18:57:17,612 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 14:57:28] 2025-06-03 18:57:17,614 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 14:57:28] 2025-06-03 18:57:17,633 | INFO     | did not find any defunct processes belonging to 3461956
[2025-06-03 14:57:28] 2025-06-03 18:57:17,651 | INFO     | did not find any defunct processes belonging to 3461956
[2025-06-03 14:57:28] 2025-06-03 18:57:17,652 | INFO     | ready for new job
[2025-06-03 14:57:28] 2025-06-03 18:57:17,652 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 14:57:28] 2025-06-03 18:57:17,656 | INFO     | **************************************
[2025-06-03 14:57:28] 2025-06-03 18:57:17,656 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 14:57:28] 2025-06-03 18:57:17,656 | INFO     | **************************************
[2025-06-03 14:57:28] 2025-06-03 18:57:17,656 | INFO     | 
[2025-06-03 14:57:28] 2025-06-03 18:57:17,662 | INFO     | architecture information:
[2025-06-03 14:57:28] 2025-06-03 18:57:17,662 | INFO     | executing command: cat /etc/os-release
[2025-06-03 14:57:28] 2025-06-03 18:57:17,680 | INFO     | cat /etc/os-release:
[2025-06-03 14:57:28] NAME="CentOS Linux"
[2025-06-03 14:57:28] VERSION="7 (Core)"
[2025-06-03 14:57:28] ID="centos"
[2025-06-03 14:57:28] ID_LIKE="rhel fedora"
[2025-06-03 14:57:28] VERSION_ID="7"
[2025-06-03 14:57:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 14:57:28] ANSI_COLOR="0;31"
[2025-06-03 14:57:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 14:57:28] HOME_URL="https://www.centos.org/"
[2025-06-03 14:57:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 14:57:28] 
[2025-06-03 14:57:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 14:57:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 14:57:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 14:57:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 14:57:28] 
[2025-06-03 14:57:28] 2025-06-03 18:57:17,680 | INFO     | **************************************
[2025-06-03 14:57:28] 2025-06-03 18:57:18,183 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-06-03 14:57:28] 2025-06-03 18:57:18,200 | INFO     | sufficient remaining disk space (90212139008 B)
[2025-06-03 14:57:28] 2025-06-03 18:57:18,201 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 14:57:28] 2025-06-03 18:57:18,201 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 14:57:28] 2025-06-03 18:57:18,201 | INFO     | update_server=False
[2025-06-03 14:57:28] 2025-06-03 18:57:18,201 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 14:57:28] 2025-06-03 18:57:18,202 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:57:28] 2025-06-03 18:57:18,203 | INFO     | aborting loop
[2025-06-03 14:57:28] 2025-06-03 18:57:18,430 | INFO     | all payload control threads have been joined
[2025-06-03 14:57:28] 2025-06-03 18:57:18,962 | INFO     | PID=3454988 has CPU usage=15.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-03 14:57:28] 2025-06-03 18:57:18,963 | INFO     | .. there are 31 such processes running
[2025-06-03 14:57:28] 2025-06-03 18:57:18,963 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 14:57:28] 2025-06-03 18:57:18,963 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 14:57:28] 2025-06-03 18:57:18,963 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 14:57:28] 2025-06-03 18:57:19,024 | INFO     | all data control threads have been joined
[2025-06-03 14:57:28] 2025-06-03 18:57:19,086 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 14:57:28] 2025-06-03 18:57:19,130 | INFO     | all job control threads have been joined
[2025-06-03 14:57:28] 2025-06-03 18:57:19,200 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 14:57:28] 2025-06-03 18:57:19,206 | INFO     | [job] retrieve thread has finished
[2025-06-03 14:57:28] 2025-06-03 18:57:19,208 | INFO     | [job] job monitor thread has finished
[2025-06-03 14:57:28] 2025-06-03 18:57:19,435 | INFO     | [payload] control thread has finished
[2025-06-03 14:57:28] 2025-06-03 18:57:19,481 | INFO     | [data] copytool_in thread has finished
[2025-06-03 14:57:28] 2025-06-03 18:57:19,524 | INFO     | [payload] failed_post thread has finished
[2025-06-03 14:57:28] 2025-06-03 18:57:19,985 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 14:57:28] 2025-06-03 18:57:20,029 | INFO     | [data] control thread has finished
[2025-06-03 14:57:28] 2025-06-03 18:57:20,084 | INFO     | [job] validate thread has finished
[2025-06-03 14:57:28] 2025-06-03 18:57:20,111 | INFO     | [payload] validate_post thread has finished
[2025-06-03 14:57:28] 2025-06-03 18:57:20,136 | INFO     | [job] control thread has finished
[2025-06-03 14:57:28] 2025-06-03 18:57:20,323 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 14:57:28] 2025-06-03 18:57:20,396 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 14:57:28] 2025-06-03 18:57:20,642 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 14:57:28] 2025-06-03 18:57:20,811 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:57:28] 2025-06-03 18:57:21,091 | INFO     | [data] copytool_out thread has finished
[2025-06-03 14:57:28] 2025-06-03 18:57:21,816 | INFO     | [job] queue monitor thread has finished
[2025-06-03 14:57:28] 2025-06-03 18:57:23,206 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 14:57:28] 2025-06-03 18:57:23,224 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140020259084096)>', '<ExcThread(monitor, started 140019985520384)>']
[2025-06-03 14:57:28] 2025-06-03 18:57:23,988 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 14:57:28] 2025-06-03 18:57:23,988 | INFO     | [monitor] control thread has ended
[2025-06-03 14:57:28] 2025-06-03 18:57:28,249 | INFO     | all workflow threads have been joined
[2025-06-03 14:57:28] 2025-06-03 18:57:28,250 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 14:57:28] 2025-06-03 18:57:28,250 | INFO     | traces error code: 0
[2025-06-03 14:57:28] 2025-06-03 18:57:28,250 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 14:57:28] 2025-06-03 18:57:28,425 [wrapper] ==== pilot stdout END ====
[2025-06-03 14:57:28] 2025-06-03 18:57:28,428 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 14:57:28] 2025-06-03 18:57:28,431 [wrapper] pilotpid: 3454988
[2025-06-03 14:57:28] 2025-06-03 18:57:28,434 [wrapper] Pilot exit status: 0
[2025-06-03 14:57:28] 2025-06-03 18:57:28,447 [wrapper] pandaids: 6677393294
[2025-06-03 14:57:28] 2025-06-03 18:57:28,539 [wrapper] cleanup supervisor_pilot  122074 3454989
[2025-06-03 14:57:28] 2025-06-03 18:57:28,542 [wrapper] Test setup, not cleaning
[2025-06-03 14:57:28] 2025-06-03 18:57:28,545 [wrapper] apfmon messages muted
[2025-06-03 14:57:28] 2025-06-03 18:57:28,547 [wrapper] ==== wrapper stdout END ====
[2025-06-03 14:57:28] 2025-06-03 18:57:28,550 [wrapper] ==== wrapper stderr END ====
[2025-06-03 14:57:28]  *** Error codes and diagnostics ***
[2025-06-03 14:57:28]     "exeErrorCode": 0,
[2025-06-03 14:57:28]     "exeErrorDiag": "",
[2025-06-03 14:57:28]     "pilotErrorCode": 0,
[2025-06-03 14:57:28]     "pilotErrorDiag": "",
[2025-06-03 14:57:28]  *** Listing of results directory ***
[2025-06-03 14:57:28] total 390836
[2025-06-03 14:57:28] -rw-r--r--. 1 boincer umatlas    495897 Jun  2 14:47 pilot3.tar.gz
[2025-06-03 14:57:28] -rwx------. 1 boincer umatlas     37140 Jun  2 14:59 runpilot2-wrapper.sh
[2025-06-03 14:57:28] -rw-r--r--. 1 boincer umatlas      5111 Jun  2 14:59 queuedata.json
[2025-06-03 14:57:28] -rw-r--r--. 1 boincer umatlas       100 Jun  3 13:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 14:57:28] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 13:29 run_atlas
[2025-06-03 14:57:28] -rw-r--r--. 1 boincer umatlas       105 Jun  3 13:29 job.xml
[2025-06-03 14:57:28] -rw-r--r--. 2 boincer umatlas 216883127 Jun  3 13:29 EVNT.45006593._000339.pool.root.1
[2025-06-03 14:57:28] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:29 start_atlas.sh
[2025-06-03 14:57:28] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 13:29 shared
[2025-06-03 14:57:28] -rw-r--r--. 2 boincer umatlas    508878 Jun  3 13:29 input.tar.gz
[2025-06-03 14:57:28] -rw-r--r--. 1 boincer umatlas         0 Jun  3 13:29 boinc_lockfile
[2025-06-03 14:57:28] -rw-r--r--. 1 boincer umatlas      2521 Jun  3 13:29 pandaJob.out
[2025-06-03 14:57:28] -rw-------. 1 boincer umatlas    985078 Jun  3 13:29 agis_schedconf.cvmfs.json
[2025-06-03 14:57:28] -rw-------. 1 boincer umatlas   1603667 Jun  3 13:29 agis_ddmendpoints.agis.ALL.json
[2025-06-03 14:57:28] drwx------. 4 boincer umatlas      4096 Jun  3 13:29 pilot3
[2025-06-03 14:57:28] -rw-r--r--. 1 boincer umatlas      6867 Jun  3 14:55 init_data.xml
[2025-06-03 14:57:28] -rw-------. 1 boincer umatlas        95 Jun  3 14:56 pilot_heartbeat.json
[2025-06-03 14:57:28] -rw-r--r--. 1 boincer umatlas       529 Jun  3 14:56 boinc_task_state.xml
[2025-06-03 14:57:28] -rw-------. 1 boincer umatlas 177876385 Jun  3 14:56 HITS.45006595._008469.pool.root.1
[2025-06-03 14:57:28] -rw-------. 1 boincer umatlas      1039 Jun  3 14:57 memory_monitor_summary.json
[2025-06-03 14:57:28] -rw-------. 1 boincer umatlas    316289 Jun  3 14:57 log.45006595._008469.job.log.tgz.1
[2025-06-03 14:57:28] -rw-------. 1 boincer umatlas      7713 Jun  3 14:57 heartbeat.json
[2025-06-03 14:57:28] -rw-r--r--. 1 boincer umatlas        27 Jun  3 14:57 wrapper_checkpoint.txt
[2025-06-03 14:57:28] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 14:57 boinc_mmap_file
[2025-06-03 14:57:28] -rw-------. 1 boincer umatlas      4749 Jun  3 14:57 pilotlog.txt
[2025-06-03 14:57:28] -rw-------. 1 boincer umatlas    495611 Jun  3 14:57 log.45006595._008469.job.log.1
[2025-06-03 14:57:28] -rw-------. 1 boincer umatlas       357 Jun  3 14:57 output.list
[2025-06-03 14:57:28] -rw-r--r--. 1 boincer umatlas       620 Jun  3 14:57 runtime_log
[2025-06-03 14:57:28] -rw-------. 1 boincer umatlas    829440 Jun  3 14:57 result.tar.gz
[2025-06-03 14:57:28] -rw-------. 1 boincer umatlas       653 Jun  3 14:57 XWzMDmPYPg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm58fKDmGHRYLn.diag
[2025-06-03 14:57:28] -rw-r--r--. 1 boincer umatlas      8659 Jun  3 14:57 runtime_log.err
[2025-06-03 14:57:28] -rw-r--r--. 1 boincer umatlas     21672 Jun  3 14:57 stderr.txt
[2025-06-03 14:57:28] HITS file was successfully produced:
[2025-06-03 14:57:28] -rw-------. 1 boincer umatlas 177876385 Jun  3 14:56 shared/HITS.pool.root.1
[2025-06-03 14:57:28]  *** Contents of shared directory: ***
[2025-06-03 14:57:28] total 386844
[2025-06-03 14:57:28] -rw-r--r--. 2 boincer umatlas 216883127 Jun  3 13:29 ATLAS.root_0
[2025-06-03 14:57:28] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:29 start_atlas.sh
[2025-06-03 14:57:28] -rw-r--r--. 2 boincer umatlas    508878 Jun  3 13:29 input.tar.gz
[2025-06-03 14:57:28] -rw-------. 1 boincer umatlas 177876385 Jun  3 14:56 HITS.pool.root.1
[2025-06-03 14:57:28] -rw-------. 1 boincer umatlas    829440 Jun  3 14:57 result.tar.gz
14:57:30 (3444862): run_atlas exited; CPU time 33695.921658
14:57:30 (3444862): called boinc_finish(0)

</stderr_txt>
]]>

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