Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:35:20 (2513415): wrapper (7.7.26015): starting
13:35:20 (2513415): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 13:35:20] Arguments: --nthreads 8
[2025-06-03 13:35:20] Threads: 8
[2025-06-03 13:35:20] Checking for CVMFS
[2025-06-03 13:35:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:35:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:35:20] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:35:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:35:20] 2.12.6.0 5013 36178 590448 146750 0 197 25257230 32935937 13018 16776704 1 507074963 99.675 413114564 36178 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 13:35:20] CVMFS is ok
[2025-06-03 13:35:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 13:35:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 13:35:20] Further information can be found at the LHC@home message board.
[2025-06-03 13:35:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:35:20] Checking for apptainer binary...
[2025-06-03 13:35:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:35:20] Running /usr/bin/apptainer --version
[2025-06-03 13:35:20] apptainer version 1.4.1-1.el9
[2025-06-03 13:35:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:35:20] c7-9-15.aglt2.org
[2025-06-03 13:35:20] apptainer works
[2025-06-03 13:35:20] Set ATHENA_PROC_NUMBER=8
[2025-06-03 13:35:20] Set ATHENA_CORE_NUMBER=8
[2025-06-03 13:35:20] Starting ATLAS job with PandaID=6677392640
[2025-06-03 13:35:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 14:23:55]  *** The last 200 lines of the pilot log: ***
[2025-06-03 14:23:55]  is_tar=False
[2025-06-03 14:23:55]  lfn=log.45006595._008088.job.log.tgz.1
[2025-06-03 14:23:55]  mtime=0
[2025-06-03 14:23:55]  protocol_id=None
[2025-06-03 14:23:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 14:23:55]  replicas=None
[2025-06-03 14:23:55]  scope=mc23_13p6TeV
[2025-06-03 14:23:55]  status=None
[2025-06-03 14:23:55]  status_code=0
[2025-06-03 14:23:55]  storage_token=
[2025-06-03 14:23:55]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6677392640/log.45006595._008088.job.log.tgz.1
[2025-06-03 14:23:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0c/8d/log.45006595._008088.job.log.tgz.1
[2025-06-03 14:23:55]  workdir=None
[2025-06-03 14:23:55] ]
[2025-06-03 14:23:55] 2025-06-03 18:23:29,474 | INFO     | transferring file log.45006595._008088.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6677392640/log.45006595._008088.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 14:23:55] 2025-06-03 18:23:29,475 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6677392640/log.45006595._008088.job.log.tgz.1 /tmp/boinchome/slots/3/log.45006595._008088.job
[2025-06-03 14:23:55] 2025-06-03 18:23:29,493 | INFO     | adding to output.list: log.45006595._008088.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0c/8d/log.45006595._008088.job.log.tg
[2025-06-03 14:23:55] 2025-06-03 18:23:29,494 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 14:23:55] 2025-06-03 18:23:29,494 | INFO     | summary of transferred files:
[2025-06-03 14:23:55] 2025-06-03 18:23:29,494 | INFO     |  -- lfn=log.45006595._008088.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 14:23:55] 2025-06-03 18:23:29,494 | INFO     | stage-out finished correctly
[2025-06-03 14:23:55] 2025-06-03 18:23:29,552 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 14:23:55] 2025-06-03 18:23:30,017 | INFO     | monitor loop #216: job 0:6677392640 is in state 'finished'
[2025-06-03 14:23:55] 2025-06-03 18:23:30,017 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 14:23:55] 2025-06-03 18:23:31,913 | INFO     | job 6677392640 has state=finished
[2025-06-03 14:23:55] 2025-06-03 18:23:31,913 | INFO     | preparing for final server update for job 6677392640 in state='finished'
[2025-06-03 14:23:55] 2025-06-03 18:23:31,914 | INFO     | this job has now completed (state=finished)
[2025-06-03 14:23:55] 2025-06-03 18:23:31,914 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 14:23:55] 2025-06-03 18:23:31,914 | INFO     | log transfer has been attempted: DONE
[2025-06-03 14:23:55] 2025-06-03 18:23:31,914 | INFO     | job 6677392640 has finished - writing final server update
[2025-06-03 14:23:55] 2025-06-03 18:23:31,914 | INFO     | total number of processed events: 400 (read)
[2025-06-03 14:23:55] 2025-06-03 18:23:31,930 | INFO     | executing command: lscpu
[2025-06-03 14:23:55] 2025-06-03 18:23:32,017 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 14:23:55] 2025-06-03 18:23:32,520 | INFO     | monitor loop #217: job 0:6677392640 is in state 'finished'
[2025-06-03 14:23:55] 2025-06-03 18:23:32,520 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 14:23:55] 2025-06-03 18:23:35,023 | INFO     | monitor loop #218: job 0:6677392640 is in state 'finished'
[2025-06-03 14:23:55] 2025-06-03 18:23:35,023 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 14:23:55] 2025-06-03 18:23:35,369 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 14:23:55] 2025-06-03 18:23:35,369 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6677392640/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 14:23:55] 2025-06-03 18:23:35,370 | INFO     | extracted standard info from prmon json
[2025-06-03 14:23:55] 2025-06-03 18:23:35,370 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 14:23:55] 2025-06-03 18:23:35,370 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 14:23:55] 2025-06-03 18:23:35,370 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 14:23:55] 2025-06-03 18:23:35,370 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 14:23:55] 2025-06-03 18:23:35,371 | INFO     | fitting pss+swap vs Time
[2025-06-03 14:23:55] 2025-06-03 18:23:35,371 | INFO     | sum of square deviations: 19832930.0
[2025-06-03 14:23:55] 2025-06-03 18:23:35,371 | INFO     | sum of deviations: 4431635726.0
[2025-06-03 14:23:55] 2025-06-03 18:23:35,371 | INFO     | mean x: 1748973648.5
[2025-06-03 14:23:55] 2025-06-03 18:23:35,371 | INFO     | mean y: 2089399.35
[2025-06-03 14:23:55] 2025-06-03 18:23:35,372 | INFO     | -- intersect: -390803207877.7123
[2025-06-03 14:23:55] 2025-06-03 18:23:35,372 | INFO     | intersect: -390803207877.7123
[2025-06-03 14:23:55] 2025-06-03 18:23:35,372 | INFO     | chi2: 0.8223851392347312
[2025-06-03 14:23:55] 2025-06-03 18:23:35,372 | INFO     | -- intersect: -390803207877.7123
[2025-06-03 14:23:55] 2025-06-03 18:23:35,372 | INFO     | current memory leak: 223.45 B/s (using 40 data points, chi2=0.82)
[2025-06-03 14:23:55] 2025-06-03 18:23:35,372 | INFO     | ..............................
[2025-06-03 14:23:55] 2025-06-03 18:23:35,372 | INFO     | . Timing measurements:
[2025-06-03 14:23:55] 2025-06-03 18:23:35,372 | INFO     | . get job = 0 s
[2025-06-03 14:23:55] 2025-06-03 18:23:35,372 | INFO     | . initial setup = 2 s
[2025-06-03 14:23:55] 2025-06-03 18:23:35,372 | INFO     | . payload setup = 5 s
[2025-06-03 14:23:55] 2025-06-03 18:23:35,372 | INFO     | . stage-in = 0 s
[2025-06-03 14:23:55] 2025-06-03 18:23:35,372 | INFO     | . payload execution = 2855 s
[2025-06-03 14:23:55] 2025-06-03 18:23:35,372 | INFO     | . stage-out = 0 s
[2025-06-03 14:23:55] 2025-06-03 18:23:35,372 | INFO     | . log creation = 0 s
[2025-06-03 14:23:55] 2025-06-03 18:23:35,372 | INFO     | ..............................
[2025-06-03 14:23:55] 2025-06-03 18:23:35,429 | INFO     | 
[2025-06-03 14:23:55] 2025-06-03 18:23:35,429 | INFO     | job summary report
[2025-06-03 14:23:55] 2025-06-03 18:23:35,429 | INFO     | --------------------------------------------------
[2025-06-03 14:23:55] 2025-06-03 18:23:35,429 | INFO     | PanDA job id: 6677392640
[2025-06-03 14:23:55] 2025-06-03 18:23:35,429 | INFO     | task id: 45006595
[2025-06-03 14:23:55] 2025-06-03 18:23:35,429 | INFO     | errors: (none)
[2025-06-03 14:23:55] 2025-06-03 18:23:35,429 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 14:23:55] 2025-06-03 18:23:35,429 | INFO     | pilot state: finished 
[2025-06-03 14:23:55] 2025-06-03 18:23:35,429 | INFO     | transexitcode: 0
[2025-06-03 14:23:55] 2025-06-03 18:23:35,429 | INFO     | exeerrorcode: 0
[2025-06-03 14:23:55] 2025-06-03 18:23:35,429 | INFO     | exeerrordiag: 
[2025-06-03 14:23:55] 2025-06-03 18:23:35,429 | INFO     | exitcode: 0
[2025-06-03 14:23:55] 2025-06-03 18:23:35,429 | INFO     | exitmsg: OK
[2025-06-03 14:23:55] 2025-06-03 18:23:35,429 | INFO     | cpuconsumptiontime: 18000 s
[2025-06-03 14:23:55] 2025-06-03 18:23:35,429 | INFO     | nevents: 400
[2025-06-03 14:23:55] 2025-06-03 18:23:35,430 | INFO     | neventsw: 0
[2025-06-03 14:23:55] 2025-06-03 18:23:35,430 | INFO     | pid: 2526387
[2025-06-03 14:23:55] 2025-06-03 18:23:35,430 | INFO     | pgrp: 2526387
[2025-06-03 14:23:55] 2025-06-03 18:23:35,430 | INFO     | corecount: 8
[2025-06-03 14:23:55] 2025-06-03 18:23:35,430 | INFO     | event service: False
[2025-06-03 14:23:55] 2025-06-03 18:23:35,430 | INFO     | sizes: {0: 2405176, 4: 2405382, 11: 2405410, 2864: 2430740, 2865: 2439737, 2870: 2439851}
[2025-06-03 14:23:55] 2025-06-03 18:23:35,430 | INFO     | --------------------------------------------------
[2025-06-03 14:23:55] 2025-06-03 18:23:35,430 | INFO     | 
[2025-06-03 14:23:55] 2025-06-03 18:23:35,430 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-06-03 14:23:55] 2025-06-03 18:23:35,446 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 14:23:55] 2025-06-03 18:23:35,446 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 14:23:55] 2025-06-03 18:23:35,446 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 14:23:55] 2025-06-03 18:23:35,446 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 14:23:55] 2025-06-03 18:23:35,446 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 14:23:55] 2025-06-03 18:23:35,446 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 14:23:55] 2025-06-03 18:23:35,446 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 14:23:55] 2025-06-03 18:23:35,446 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 14:23:55] 2025-06-03 18:23:35,446 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 14:23:55] 2025-06-03 18:23:35,446 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 14:23:55] 2025-06-03 18:23:35,446 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 14:23:55] 2025-06-03 18:23:35,446 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 14:23:55] 2025-06-03 18:23:35,446 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 14:23:55] 2025-06-03 18:23:35,446 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 14:23:55] 2025-06-03 18:23:35,446 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 14:23:55] 2025-06-03 18:23:35,446 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 14:23:55] 2025-06-03 18:23:35,447 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 14:23:55] 2025-06-03 18:23:35,447 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 14:23:55] 2025-06-03 18:23:35,447 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 14:23:55] 2025-06-03 18:23:35,447 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 14:23:55] 2025-06-03 18:23:35,447 | INFO     | job 6677392640 has completed (purged errors)
[2025-06-03 14:23:55] 2025-06-03 18:23:35,447 | INFO     | overall cleanup function is called
[2025-06-03 14:23:55] 2025-06-03 18:23:36,454 | INFO     | --- collectZombieJob: --- 10, [2526387]
[2025-06-03 14:23:55] 2025-06-03 18:23:36,454 | INFO     | zombie collector waiting for pid 2526387
[2025-06-03 14:23:55] 2025-06-03 18:23:36,455 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 14:23:55] 2025-06-03 18:23:36,455 | INFO     | collected zombie processes
[2025-06-03 14:23:55] 2025-06-03 18:23:36,455 | INFO     | will attempt to kill all subprocesses of pid=2526387
[2025-06-03 14:23:55] 2025-06-03 18:23:36,769 | INFO     | process IDs to be killed: [2526387] (in reverse order)
[2025-06-03 14:23:55] 2025-06-03 18:23:36,879 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 14:23:55] 2025-06-03 18:23:36,880 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 14:23:55] 2025-06-03 18:23:36,895 | INFO     | did not find any defunct processes belonging to 2526387
[2025-06-03 14:23:55] 2025-06-03 18:23:36,908 | INFO     | did not find any defunct processes belonging to 2526387
[2025-06-03 14:23:55] 2025-06-03 18:23:36,908 | INFO     | ready for new job
[2025-06-03 14:23:55] 2025-06-03 18:23:36,908 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 14:23:55] 2025-06-03 18:23:36,909 | INFO     | **************************************
[2025-06-03 14:23:55] 2025-06-03 18:23:36,909 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 14:23:55] 2025-06-03 18:23:36,909 | INFO     | **************************************
[2025-06-03 14:23:55] 2025-06-03 18:23:36,909 | INFO     | 
[2025-06-03 14:23:55] 2025-06-03 18:23:36,925 | INFO     | architecture information:
[2025-06-03 14:23:55] 2025-06-03 18:23:36,926 | INFO     | executing command: cat /etc/os-release
[2025-06-03 14:23:55] 2025-06-03 18:23:36,942 | INFO     | cat /etc/os-release:
[2025-06-03 14:23:55] NAME="CentOS Linux"
[2025-06-03 14:23:55] VERSION="7 (Core)"
[2025-06-03 14:23:55] ID="centos"
[2025-06-03 14:23:55] ID_LIKE="rhel fedora"
[2025-06-03 14:23:55] VERSION_ID="7"
[2025-06-03 14:23:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 14:23:55] ANSI_COLOR="0;31"
[2025-06-03 14:23:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 14:23:55] HOME_URL="https://www.centos.org/"
[2025-06-03 14:23:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 14:23:55] 
[2025-06-03 14:23:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 14:23:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 14:23:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 14:23:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 14:23:55] 
[2025-06-03 14:23:55] 2025-06-03 18:23:36,942 | INFO     | **************************************
[2025-06-03 14:23:55] 2025-06-03 18:23:37,445 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-06-03 14:23:55] 2025-06-03 18:23:37,461 | INFO     | sufficient remaining disk space (68420632576 B)
[2025-06-03 14:23:55] 2025-06-03 18:23:37,462 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 14:23:55] 2025-06-03 18:23:37,462 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 14:23:55] 2025-06-03 18:23:37,462 | INFO     | update_server=False
[2025-06-03 14:23:55] 2025-06-03 18:23:37,462 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 14:23:55] 2025-06-03 18:23:37,462 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 14:23:55] 2025-06-03 18:23:37,467 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 14:23:55] 2025-06-03 18:23:37,467 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 14:23:55] 2025-06-03 18:23:37,468 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 14:23:55] 2025-06-03 18:23:37,526 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 14:23:55] 2025-06-03 18:23:37,527 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 14:23:55] 2025-06-03 18:23:37,527 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:23:55] 2025-06-03 18:23:37,527 | INFO     | will abort loop
[2025-06-03 14:23:55] 2025-06-03 18:23:37,563 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 14:23:55] 2025-06-03 18:23:37,773 | INFO     | all data control threads have been joined
[2025-06-03 14:23:55] 2025-06-03 18:23:37,773 | INFO     | all payload control threads have been joined
[2025-06-03 14:23:55] 2025-06-03 18:23:37,951 | INFO     | all job control threads have been joined
[2025-06-03 14:23:55] 2025-06-03 18:23:38,467 | INFO     | [job] retrieve thread has finished
[2025-06-03 14:23:55] 2025-06-03 18:23:38,532 | INFO     | [job] job monitor thread has finished
[2025-06-03 14:23:55] 2025-06-03 18:23:38,777 | INFO     | [data] control thread has finished
[2025-06-03 14:23:55] 2025-06-03 18:23:38,779 | INFO     | [payload] control thread has finished
[2025-06-03 14:23:55] 2025-06-03 18:23:38,797 | INFO     | [job] validate thread has finished
[2025-06-03 14:23:55] 2025-06-03 18:23:38,921 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 14:23:55] 2025-06-03 18:23:38,935 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 14:23:55] 2025-06-03 18:23:38,956 | INFO     | [job] control thread has finished
[2025-06-03 14:23:55] 2025-06-03 18:23:39,001 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 14:23:55] 2025-06-03 18:23:39,027 | INFO     | [payload] failed_post thread has finished
[2025-06-03 14:23:55] 2025-06-03 18:23:39,570 | INFO     | [data] copytool_out thread has finished
[2025-06-03 14:23:55] 2025-06-03 18:23:39,596 | INFO     | [payload] validate_post thread has finished
[2025-06-03 14:23:55] 2025-06-03 18:23:39,947 | INFO     | [data] copytool_in thread has finished
[2025-06-03 14:23:55] 2025-06-03 18:23:40,126 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 14:23:55] 2025-06-03 18:23:40,439 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:23:55] 2025-06-03 18:23:41,445 | INFO     | [job] queue monitor thread has finished
[2025-06-03 14:23:55] 2025-06-03 18:23:44,131 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 14:23:55] 2025-06-03 18:23:47,581 | INFO     | job.realtimelogging is not enabled
[2025-06-03 14:23:55] 2025-06-03 18:23:48,581 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 14:23:55] 2025-06-03 18:23:50,614 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140676381517632)>', '<ExcThread(monitor, started 140675605587712)>']
[2025-06-03 14:23:55] 2025-06-03 18:23:51,532 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 14:23:55] 2025-06-03 18:23:51,532 | INFO     | [monitor] control thread has ended
[2025-06-03 14:23:55] 2025-06-03 18:23:55,640 | INFO     | all workflow threads have been joined
[2025-06-03 14:23:55] 2025-06-03 18:23:55,640 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 14:23:55] 2025-06-03 18:23:55,640 | INFO     | traces error code: 0
[2025-06-03 14:23:55] 2025-06-03 18:23:55,640 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 14:23:55] 2025-06-03 18:23:55,728 [wrapper] ==== pilot stdout END ====
[2025-06-03 14:23:55] 2025-06-03 18:23:55,732 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 14:23:55] 2025-06-03 18:23:55,734 [wrapper] pilotpid: 2517014
[2025-06-03 14:23:55] 2025-06-03 18:23:55,736 [wrapper] Pilot exit status: 0
[2025-06-03 14:23:55] 2025-06-03 18:23:55,744 [wrapper] pandaids: 6677392640
[2025-06-03 14:23:55] 2025-06-03 18:23:55,820 [wrapper] cleanup supervisor_pilot 2875890 2517015
[2025-06-03 14:23:55] 2025-06-03 18:23:55,823 [wrapper] Test setup, not cleaning
[2025-06-03 14:23:55] 2025-06-03 18:23:55,825 [wrapper] apfmon messages muted
[2025-06-03 14:23:55] 2025-06-03 18:23:55,827 [wrapper] ==== wrapper stdout END ====
[2025-06-03 14:23:55] 2025-06-03 18:23:55,829 [wrapper] ==== wrapper stderr END ====
[2025-06-03 14:23:55]  *** Error codes and diagnostics ***
[2025-06-03 14:23:55]     "exeErrorCode": 0,
[2025-06-03 14:23:55]     "exeErrorDiag": "",
[2025-06-03 14:23:55]     "pilotErrorCode": 0,
[2025-06-03 14:23:55]     "pilotErrorDiag": "",
[2025-06-03 14:23:55]  *** Listing of results directory ***
[2025-06-03 14:23:55] total 388764
[2025-06-03 14:23:55] -rw-r--r--. 1 boincer umatlas    495897 Jun  2 14:47 pilot3.tar.gz
[2025-06-03 14:23:55] -rw-r--r--. 1 boincer umatlas      5111 Jun  2 14:50 queuedata.json
[2025-06-03 14:23:55] -rwx------. 1 boincer umatlas     37140 Jun  2 14:50 runpilot2-wrapper.sh
[2025-06-03 14:23:55] -rw-r--r--. 1 boincer umatlas       100 Jun  3 13:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 14:23:55] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 13:35 run_atlas
[2025-06-03 14:23:55] -rw-r--r--. 1 boincer umatlas       105 Jun  3 13:35 job.xml
[2025-06-03 14:23:55] -rw-r--r--. 2 boincer umatlas 215140877 Jun  3 13:35 EVNT.45006593._000324.pool.root.1
[2025-06-03 14:23:55] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:35 start_atlas.sh
[2025-06-03 14:23:55] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 13:35 shared
[2025-06-03 14:23:55] -rw-r--r--. 2 boincer umatlas    508878 Jun  3 13:35 input.tar.gz
[2025-06-03 14:23:55] -rw-r--r--. 1 boincer umatlas         0 Jun  3 13:35 boinc_lockfile
[2025-06-03 14:23:55] -rw-r--r--. 1 boincer umatlas      2520 Jun  3 13:35 pandaJob.out
[2025-06-03 14:23:55] -rw-------. 1 boincer umatlas    985078 Jun  3 13:35 agis_schedconf.cvmfs.json
[2025-06-03 14:23:55] -rw-------. 1 boincer umatlas   1603667 Jun  3 13:35 agis_ddmendpoints.agis.ALL.json
[2025-06-03 14:23:55] drwx------. 4 boincer umatlas      4096 Jun  3 13:35 pilot3
[2025-06-03 14:23:55] -rw-r--r--. 1 boincer umatlas      7161 Jun  3 14:21 init_data.xml
[2025-06-03 14:23:55] -rw-------. 1 boincer umatlas 177940036 Jun  3 14:23 HITS.45006595._008088.pool.root.1
[2025-06-03 14:23:55] -rw-r--r--. 1 boincer umatlas       530 Jun  3 14:23 boinc_task_state.xml
[2025-06-03 14:23:55] -rw-------. 1 boincer umatlas        95 Jun  3 14:23 pilot_heartbeat.json
[2025-06-03 14:23:55] -rw-------. 1 boincer umatlas      1030 Jun  3 14:23 memory_monitor_summary.json
[2025-06-03 14:23:55] -rw-------. 1 boincer umatlas    285410 Jun  3 14:23 log.45006595._008088.job.log.tgz.1
[2025-06-03 14:23:55] -rw-------. 1 boincer umatlas      7680 Jun  3 14:23 heartbeat.json
[2025-06-03 14:23:55] -rw-r--r--. 1 boincer umatlas        27 Jun  3 14:23 wrapper_checkpoint.txt
[2025-06-03 14:23:55] -rw-------. 1 boincer umatlas      4734 Jun  3 14:23 pilotlog.txt
[2025-06-03 14:23:55] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 14:23 boinc_mmap_file
[2025-06-03 14:23:55] -rw-------. 1 boincer umatlas    304812 Jun  3 14:23 log.45006595._008088.job.log.1
[2025-06-03 14:23:55] -rw-------. 1 boincer umatlas       357 Jun  3 14:23 output.list
[2025-06-03 14:23:55] -rw-r--r--. 1 boincer umatlas       620 Jun  3 14:23 runtime_log
[2025-06-03 14:23:55] -rw-------. 1 boincer umatlas    604160 Jun  3 14:23 result.tar.gz
[2025-06-03 14:23:55] -rw-r--r--. 1 boincer umatlas      8654 Jun  3 14:23 runtime_log.err
[2025-06-03 14:23:55] -rw-------. 1 boincer umatlas       650 Jun  3 14:23 19sKDmPQPg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmOHWKDm8lVgfm.diag
[2025-06-03 14:23:55] -rw-r--r--. 1 boincer umatlas     21449 Jun  3 14:23 stderr.txt
[2025-06-03 14:23:55] HITS file was successfully produced:
[2025-06-03 14:23:55] -rw-------. 1 boincer umatlas 177940036 Jun  3 14:23 shared/HITS.pool.root.1
[2025-06-03 14:23:55]  *** Contents of shared directory: ***
[2025-06-03 14:23:55] total 384988
[2025-06-03 14:23:55] -rw-r--r--. 2 boincer umatlas 215140877 Jun  3 13:35 ATLAS.root_0
[2025-06-03 14:23:55] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:35 start_atlas.sh
[2025-06-03 14:23:55] -rw-r--r--. 2 boincer umatlas    508878 Jun  3 13:35 input.tar.gz
[2025-06-03 14:23:55] -rw-------. 1 boincer umatlas 177940036 Jun  3 14:23 HITS.pool.root.1
[2025-06-03 14:23:55] -rw-------. 1 boincer umatlas    604160 Jun  3 14:23 result.tar.gz
14:24:17 (2513415): run_atlas exited; CPU time 18058.534523
14:24:17 (2513415): called boinc_finish(0)

</stderr_txt>
]]>

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