Stderr output

<core_client_version>8.0.3</core_client_version>
<![CDATA[
<stderr_txt>
14:25:00 (1339567): wrapper (7.7.26015): starting
14:25:00 (1339567): wrapper: running run_atlas (--nthreads 2)
[2025-06-03 14:25:00] Arguments: --nthreads 2
[2025-06-03 14:25:00] Threads: 2
[2025-06-03 14:25:00] Checking for CVMFS
[2025-06-03 14:25:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 14:25:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 14:25:00] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 14:25:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 14:25:01] 2.12.7.0 979791 321 58112 146753 3 187 5174163 6144001 922 130560 0 493787 99.994 80706 3286 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-03 14:25:01] CVMFS is ok
[2025-06-03 14:25:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 14:25:01] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-03 14:25:01] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-03 14:25:01] Further information can be found at the LHC@home message board.
[2025-06-03 14:25:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 14:25:01] Checking for apptainer binary...
[2025-06-03 14:25:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 14:25:01] Running /usr/bin/apptainer --version
[2025-06-03 14:25:01] apptainer version 1.4.0
[2025-06-03 14:25:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 14:25:01] Aphrodite
[2025-06-03 14:25:01] apptainer works
[2025-06-03 14:25:01] Set ATHENA_PROC_NUMBER=2
[2025-06-03 14:25:01] Set ATHENA_CORE_NUMBER=2
[2025-06-03 14:25:01] Starting ATLAS job with PandaID=6677676345
[2025-06-03 14:25:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 16:09:42]  *** The last 200 lines of the pilot log: ***
[2025-06-03 16:09:42] 2025-06-03 21:09:18,185 | INFO     | monitor loop #481: job 0:6677676345 is in state 'finished'
[2025-06-03 16:09:42] 2025-06-03 21:09:18,185 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 16:09:42] 2025-06-03 21:09:20,686 | INFO     | monitor loop #482: job 0:6677676345 is in state 'finished'
[2025-06-03 16:09:42] 2025-06-03 21:09:20,686 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 16:09:42] 2025-06-03 21:09:23,189 | INFO     | monitor loop #483: job 0:6677676345 is in state 'finished'
[2025-06-03 16:09:42] 2025-06-03 21:09:23,189 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 16:09:42] 2025-06-03 21:09:24,118 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 16:09:42] 2025-06-03 21:09:24,118 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6677676345/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 16:09:42] 2025-06-03 21:09:24,118 | INFO     | extracted standard info from prmon json
[2025-06-03 16:09:42] 2025-06-03 21:09:24,118 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 16:09:42] 2025-06-03 21:09:24,118 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 16:09:42] 2025-06-03 21:09:24,119 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 16:09:42] 2025-06-03 21:09:24,119 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 16:09:42] 2025-06-03 21:09:24,119 | INFO     | fitting pss+swap vs Time
[2025-06-03 16:09:42] 2025-06-03 21:09:24,119 | INFO     | sum of square deviations: 329031285.5
[2025-06-03 16:09:42] 2025-06-03 21:09:24,120 | INFO     | sum of deviations: 2170865926.0
[2025-06-03 16:09:42] 2025-06-03 21:09:24,120 | INFO     | mean x: 1748981803.5
[2025-06-03 16:09:42] 2025-06-03 21:09:24,120 | INFO     | mean y: 2279584.9411764704
[2025-06-03 16:09:42] 2025-06-03 21:09:24,120 | INFO     | -- intersect: -11537063844.491394
[2025-06-03 16:09:42] 2025-06-03 21:09:24,120 | INFO     | intersect: -11537063844.491394
[2025-06-03 16:09:42] 2025-06-03 21:09:24,120 | INFO     | chi2: 1.1209005941099224
[2025-06-03 16:09:42] 2025-06-03 21:09:24,120 | INFO     | sum of square deviations: 282974608.0
[2025-06-03 16:09:42] 2025-06-03 21:09:24,120 | INFO     | sum of deviations: 1384634851.9999998
[2025-06-03 16:09:42] 2025-06-03 21:09:24,120 | INFO     | mean x: 1748981651.0
[2025-06-03 16:09:42] 2025-06-03 21:09:24,120 | INFO     | mean y: 2276981.9587628865
[2025-06-03 16:09:42] 2025-06-03 21:09:24,120 | INFO     | -- intersect: -8555738051.966473
[2025-06-03 16:09:42] 2025-06-03 21:09:24,120 | INFO     | intersect: -8555738051.966473
[2025-06-03 16:09:42] 2025-06-03 21:09:24,120 | INFO     | chi2: 1.1165869742428778
[2025-06-03 16:09:42] 2025-06-03 21:09:24,120 | INFO     | current chi2=1.1165869742428778 (change=0.38483518428946195 %)
[2025-06-03 16:09:42] 2025-06-03 21:09:24,121 | INFO     | right removable region: 96
[2025-06-03 16:09:42] 2025-06-03 21:09:24,121 | INFO     | sum of square deviations: 282974608.0
[2025-06-03 16:09:42] 2025-06-03 21:09:24,121 | INFO     | sum of deviations: -3936626581.9999986
[2025-06-03 16:09:42] 2025-06-03 21:09:24,121 | INFO     | mean x: 1748981956.0
[2025-06-03 16:09:42] 2025-06-03 21:09:24,121 | INFO     | mean y: 2298803.855670103
[2025-06-03 16:09:42] 2025-06-03 21:09:24,121 | INFO     | -- intersect: 24333417797.50033
[2025-06-03 16:09:42] 2025-06-03 21:09:24,121 | INFO     | intersect: 24333417797.50033
[2025-06-03 16:09:42] 2025-06-03 21:09:24,121 | INFO     | chi2: 0.07354001151090982
[2025-06-03 16:09:42] 2025-06-03 21:09:24,121 | INFO     | current chi2=0.07354001151090982 (change=93.43920309282146 %)
[2025-06-03 16:09:42] 2025-06-03 21:09:24,121 | INFO     | sum of square deviations: 241429643.0
[2025-06-03 16:09:42] 2025-06-03 21:09:24,121 | INFO     | sum of deviations: -1726003875.5
[2025-06-03 16:09:42] 2025-06-03 21:09:24,121 | INFO     | mean x: 1748982108.5
[2025-06-03 16:09:42] 2025-06-03 21:09:24,121 | INFO     | mean y: 2290671.7065217393
[2025-06-03 16:09:42] 2025-06-03 21:09:24,121 | INFO     | -- intersect: 12505932974.864637
[2025-06-03 16:09:42] 2025-06-03 21:09:24,121 | INFO     | intersect: 12505932974.864637
[2025-06-03 16:09:42] 2025-06-03 21:09:24,122 | INFO     | chi2: 0.06014244062258329
[2025-06-03 16:09:42] 2025-06-03 21:09:24,122 | INFO     | current chi2=0.06014244062258329 (change=18.21807015401265 %)
[2025-06-03 16:09:42] 2025-06-03 21:09:24,122 | INFO     | left removable region: 20
[2025-06-03 16:09:42] 2025-06-03 21:09:24,122 | INFO     | sum of square deviations: 136095575.0
[2025-06-03 16:09:42] 2025-06-03 21:09:24,122 | INFO     | sum of deviations: 1512013710.0
[2025-06-03 16:09:42] 2025-06-03 21:09:24,122 | INFO     | mean x: 1748982230.5
[2025-06-03 16:09:42] 2025-06-03 21:09:24,122 | INFO     | mean y: 2268760.736842105
[2025-06-03 16:09:42] 2025-06-03 21:09:24,122 | INFO     | -- intersect: -19428819362.90259
[2025-06-03 16:09:42] 2025-06-03 21:09:24,122 | INFO     | intersect: -19428819362.90259
[2025-06-03 16:09:42] 2025-06-03 21:09:24,122 | INFO     | chi2: 0.003937011352799395
[2025-06-03 16:09:42] 2025-06-03 21:09:24,122 | INFO     | -- intersect: -19428819362.90259
[2025-06-03 16:09:42] 2025-06-03 21:09:24,122 | INFO     | current memory leak: 11.11 B/s (using 76 data points, chi2=0.00)
[2025-06-03 16:09:42] 2025-06-03 21:09:24,122 | INFO     | ..............................
[2025-06-03 16:09:42] 2025-06-03 21:09:24,122 | INFO     | . Timing measurements:
[2025-06-03 16:09:42] 2025-06-03 21:09:24,122 | INFO     | . get job = 0 s
[2025-06-03 16:09:42] 2025-06-03 21:09:24,122 | INFO     | . initial setup = 2 s
[2025-06-03 16:09:42] 2025-06-03 21:09:24,123 | INFO     | . payload setup = 2 s
[2025-06-03 16:09:42] 2025-06-03 21:09:24,123 | INFO     | . stage-in = 0 s
[2025-06-03 16:09:42] 2025-06-03 21:09:24,123 | INFO     | . payload execution = 6198 s
[2025-06-03 16:09:42] 2025-06-03 21:09:24,123 | INFO     | . stage-out = 0 s
[2025-06-03 16:09:42] 2025-06-03 21:09:24,123 | INFO     | . log creation = 0 s
[2025-06-03 16:09:42] 2025-06-03 21:09:24,123 | INFO     | ..............................
[2025-06-03 16:09:42] 2025-06-03 21:09:24,204 | INFO     | 
[2025-06-03 16:09:42] 2025-06-03 21:09:24,204 | INFO     | job summary report
[2025-06-03 16:09:42] 2025-06-03 21:09:24,204 | INFO     | --------------------------------------------------
[2025-06-03 16:09:42] 2025-06-03 21:09:24,204 | INFO     | PanDA job id: 6677676345
[2025-06-03 16:09:42] 2025-06-03 21:09:24,204 | INFO     | task id: 45006595
[2025-06-03 16:09:42] 2025-06-03 21:09:24,204 | INFO     | errors: (none)
[2025-06-03 16:09:42] 2025-06-03 21:09:24,204 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 16:09:42] 2025-06-03 21:09:24,204 | INFO     | pilot state: finished 
[2025-06-03 16:09:42] 2025-06-03 21:09:24,204 | INFO     | transexitcode: 0
[2025-06-03 16:09:42] 2025-06-03 21:09:24,204 | INFO     | exeerrorcode: 0
[2025-06-03 16:09:42] 2025-06-03 21:09:24,204 | INFO     | exeerrordiag: 
[2025-06-03 16:09:42] 2025-06-03 21:09:24,204 | INFO     | exitcode: 0
[2025-06-03 16:09:42] 2025-06-03 21:09:24,204 | INFO     | exitmsg: OK
[2025-06-03 16:09:42] 2025-06-03 21:09:24,204 | INFO     | cpuconsumptiontime: 12199 s
[2025-06-03 16:09:42] 2025-06-03 21:09:24,204 | INFO     | nevents: 400
[2025-06-03 16:09:42] 2025-06-03 21:09:24,204 | INFO     | neventsw: 0
[2025-06-03 16:09:42] 2025-06-03 21:09:24,204 | INFO     | pid: 1350143
[2025-06-03 16:09:42] 2025-06-03 21:09:24,204 | INFO     | pgrp: 1350143
[2025-06-03 16:09:42] 2025-06-03 21:09:24,204 | INFO     | corecount: 2
[2025-06-03 16:09:42] 2025-06-03 21:09:24,205 | INFO     | event service: False
[2025-06-03 16:09:42] 2025-06-03 21:09:24,205 | INFO     | sizes: {0: 2405184, 2: 2405390, 11: 2405418, 6204: 2432328, 6205: 2441324, 6208: 2441324, 6246: 2441622}
[2025-06-03 16:09:42] 2025-06-03 21:09:24,205 | INFO     | --------------------------------------------------
[2025-06-03 16:09:42] 2025-06-03 21:09:24,205 | INFO     | 
[2025-06-03 16:09:42] 2025-06-03 21:09:24,205 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-06-03 16:09:42] 2025-06-03 21:09:24,214 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 16:09:42] 2025-06-03 21:09:24,214 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 16:09:42] 2025-06-03 21:09:24,214 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 16:09:42] 2025-06-03 21:09:24,214 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 16:09:42] 2025-06-03 21:09:24,214 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 16:09:42] 2025-06-03 21:09:24,214 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 16:09:42] 2025-06-03 21:09:24,214 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 16:09:42] 2025-06-03 21:09:24,214 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 16:09:42] 2025-06-03 21:09:24,214 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 16:09:42] 2025-06-03 21:09:24,214 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 16:09:42] 2025-06-03 21:09:24,214 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 16:09:42] 2025-06-03 21:09:24,214 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 16:09:42] 2025-06-03 21:09:24,214 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 16:09:42] 2025-06-03 21:09:24,214 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 16:09:42] 2025-06-03 21:09:24,214 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 16:09:42] 2025-06-03 21:09:24,214 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 16:09:42] 2025-06-03 21:09:24,215 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 16:09:42] 2025-06-03 21:09:24,215 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 16:09:42] 2025-06-03 21:09:24,215 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 16:09:42] 2025-06-03 21:09:24,215 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 16:09:42] 2025-06-03 21:09:24,215 | INFO     | job 6677676345 has completed (purged errors)
[2025-06-03 16:09:42] 2025-06-03 21:09:24,215 | INFO     | overall cleanup function is called
[2025-06-03 16:09:42] 2025-06-03 21:09:25,221 | INFO     | --- collectZombieJob: --- 10, [1350143]
[2025-06-03 16:09:42] 2025-06-03 21:09:25,221 | INFO     | zombie collector waiting for pid 1350143
[2025-06-03 16:09:42] 2025-06-03 21:09:25,221 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 16:09:42] 2025-06-03 21:09:25,221 | INFO     | collected zombie processes
[2025-06-03 16:09:42] 2025-06-03 21:09:25,221 | INFO     | will attempt to kill all subprocesses of pid=1350143
[2025-06-03 16:09:42] 2025-06-03 21:09:25,308 | INFO     | process IDs to be killed: [1350143] (in reverse order)
[2025-06-03 16:09:42] 2025-06-03 21:09:25,341 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 16:09:42] 2025-06-03 21:09:25,342 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 16:09:42] 2025-06-03 21:09:25,346 | INFO     | did not find any defunct processes belonging to 1350143
[2025-06-03 16:09:42] 2025-06-03 21:09:25,350 | INFO     | did not find any defunct processes belonging to 1350143
[2025-06-03 16:09:42] 2025-06-03 21:09:25,350 | INFO     | ready for new job
[2025-06-03 16:09:42] 2025-06-03 21:09:25,350 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 16:09:42] 2025-06-03 21:09:25,351 | INFO     | **************************************
[2025-06-03 16:09:42] 2025-06-03 21:09:25,351 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 16:09:42] 2025-06-03 21:09:25,351 | INFO     | **************************************
[2025-06-03 16:09:42] 2025-06-03 21:09:25,351 | INFO     | 
[2025-06-03 16:09:42] 2025-06-03 21:09:25,351 | INFO     | architecture information:
[2025-06-03 16:09:42] 2025-06-03 21:09:25,351 | INFO     | executing command: cat /etc/os-release
[2025-06-03 16:09:42] 2025-06-03 21:09:25,358 | INFO     | cat /etc/os-release:
[2025-06-03 16:09:42] NAME="CentOS Linux"
[2025-06-03 16:09:42] VERSION="7 (Core)"
[2025-06-03 16:09:42] ID="centos"
[2025-06-03 16:09:42] ID_LIKE="rhel fedora"
[2025-06-03 16:09:42] VERSION_ID="7"
[2025-06-03 16:09:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 16:09:42] ANSI_COLOR="0;31"
[2025-06-03 16:09:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 16:09:42] HOME_URL="https://www.centos.org/"
[2025-06-03 16:09:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 16:09:42] 
[2025-06-03 16:09:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 16:09:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 16:09:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 16:09:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 16:09:42] 
[2025-06-03 16:09:42] 2025-06-03 21:09:25,358 | INFO     | **************************************
[2025-06-03 16:09:42] 2025-06-03 21:09:25,861 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-06-03 16:09:42] 2025-06-03 21:09:25,873 | INFO     | sufficient remaining disk space (2662029328384 B)
[2025-06-03 16:09:42] 2025-06-03 21:09:25,874 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 16:09:42] 2025-06-03 21:09:25,874 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 16:09:42] 2025-06-03 21:09:25,874 | INFO     | update_server=False
[2025-06-03 16:09:42] 2025-06-03 21:09:25,874 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 16:09:42] 2025-06-03 21:09:25,874 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 16:09:42] 2025-06-03 21:09:25,874 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 16:09:42] 2025-06-03 21:09:25,874 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 16:09:42] 2025-06-03 21:09:25,874 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 16:09:42] 2025-06-03 21:09:25,875 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 16:09:42] 2025-06-03 21:09:26,165 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 16:09:42] 2025-06-03 21:09:26,572 | INFO     | all data control threads have been joined
[2025-06-03 16:09:42] 2025-06-03 21:09:26,588 | INFO     | all payload control threads have been joined
[2025-06-03 16:09:42] 2025-06-03 21:09:26,695 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 16:09:42] 2025-06-03 21:09:26,695 | INFO     | aborting loop
[2025-06-03 16:09:42] 2025-06-03 21:09:26,879 | INFO     | [job] retrieve thread has finished
[2025-06-03 16:09:42] 2025-06-03 21:09:26,879 | INFO     | [job] queue monitor thread has finished
[2025-06-03 16:09:42] 2025-06-03 21:09:26,978 | INFO     | all job control threads have been joined
[2025-06-03 16:09:42] 2025-06-03 21:09:27,094 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 16:09:42] 2025-06-03 21:09:27,132 | INFO     | [payload] validate_post thread has finished
[2025-06-03 16:09:42] 2025-06-03 21:09:27,204 | INFO     | [data] copytool_in thread has finished
[2025-06-03 16:09:42] 2025-06-03 21:09:27,577 | INFO     | [data] control thread has finished
[2025-06-03 16:09:42] 2025-06-03 21:09:27,593 | INFO     | [payload] control thread has finished
[2025-06-03 16:09:42] 2025-06-03 21:09:27,700 | INFO     | [job] job monitor thread has finished
[2025-06-03 16:09:42] 2025-06-03 21:09:27,979 | INFO     | [job] control thread has finished
[2025-06-03 16:09:42] 2025-06-03 21:09:28,170 | INFO     | [data] copytool_out thread has finished
[2025-06-03 16:09:42] 2025-06-03 21:09:28,171 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 16:09:42] 2025-06-03 21:09:28,181 | INFO     | [payload] failed_post thread has finished
[2025-06-03 16:09:42] 2025-06-03 21:09:28,292 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 16:09:42] 2025-06-03 21:09:28,299 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 16:09:42] 2025-06-03 21:09:28,348 | INFO     | [job] validate thread has finished
[2025-06-03 16:09:42] 2025-06-03 21:09:32,176 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 16:09:42] 2025-06-03 21:09:36,507 | INFO     | job.realtimelogging is not enabled
[2025-06-03 16:09:42] 2025-06-03 21:09:37,512 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 16:09:42] 2025-06-03 21:09:37,680 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139688073770816)>', '<ExcThread(monitor, started 139687368849152)>']
[2025-06-03 16:09:42] 2025-06-03 21:09:37,927 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 16:09:42] 2025-06-03 21:09:37,927 | INFO     | [monitor] control thread has ended
[2025-06-03 16:09:42] 2025-06-03 21:09:42,705 | INFO     | all workflow threads have been joined
[2025-06-03 16:09:42] 2025-06-03 21:09:42,705 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 16:09:42] 2025-06-03 21:09:42,705 | INFO     | traces error code: 0
[2025-06-03 16:09:42] 2025-06-03 21:09:42,705 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 16:09:42] 2025-06-03 21:09:42,748 [wrapper] ==== pilot stdout END ====
[2025-06-03 16:09:42] 2025-06-03 21:09:42,749 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 16:09:42] 2025-06-03 21:09:42,751 [wrapper] pilotpid: 1343303
[2025-06-03 16:09:42] 2025-06-03 21:09:42,752 [wrapper] Pilot exit status: 0
[2025-06-03 16:09:42] 2025-06-03 21:09:42,756 [wrapper] pandaids: 6677676345
[2025-06-03 16:09:42] 2025-06-03 21:09:42,780 [wrapper] cleanup supervisor_pilot 1422403 1343304
[2025-06-03 16:09:42] 2025-06-03 21:09:42,781 [wrapper] Test setup, not cleaning
[2025-06-03 16:09:42] 2025-06-03 21:09:42,782 [wrapper] apfmon messages muted
[2025-06-03 16:09:42] 2025-06-03 21:09:42,783 [wrapper] ==== wrapper stdout END ====
[2025-06-03 16:09:42] 2025-06-03 21:09:42,785 [wrapper] ==== wrapper stderr END ====
[2025-06-03 16:09:42]  *** Error codes and diagnostics ***
[2025-06-03 16:09:42]     "exeErrorCode": 0,
[2025-06-03 16:09:42]     "exeErrorDiag": "",
[2025-06-03 16:09:42]     "pilotErrorCode": 0,
[2025-06-03 16:09:42]     "pilotErrorDiag": "",
[2025-06-03 16:09:42]  *** Listing of results directory ***
[2025-06-03 16:09:42] total 396916
[2025-06-03 16:09:42] -rw-r--r-- 1 boinc boinc    495897 Jun  3 09:52 pilot3.tar.gz
[2025-06-03 16:09:42] -rwx------ 1 boinc boinc     37140 Jun  3 10:02 runpilot2-wrapper.sh
[2025-06-03 16:09:42] -rw-r--r-- 1 boinc boinc      5111 Jun  3 10:02 queuedata.json
[2025-06-03 16:09:42] -rw-r--r-- 1 boinc boinc       100 Jun  3 14:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 16:09:42] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 14:25 run_atlas
[2025-06-03 16:09:42] -rw-r--r-- 1 boinc boinc       105 Jun  3 14:25 job.xml
[2025-06-03 16:09:42] -rw-r--r-- 2 boinc boinc 216446000 Jun  3 14:25 EVNT.45006593._001465.pool.root.1
[2025-06-03 16:09:42] -rw-r--r-- 1 boinc boinc      6996 Jun  3 14:25 init_data.xml
[2025-06-03 16:09:42] drwxrwx--x 1 boinc boinc        76 Jun  3 14:25 shared
[2025-06-03 16:09:42] -rw-r--r-- 2 boinc boinc    508879 Jun  3 14:25 input.tar.gz
[2025-06-03 16:09:42] -rw-r--r-- 2 boinc boinc     15093 Jun  3 14:25 start_atlas.sh
[2025-06-03 16:09:42] -rw-r--r-- 1 boinc boinc         0 Jun  3 14:25 boinc_lockfile
[2025-06-03 16:09:42] -rw-r--r-- 1 boinc boinc      2525 Jun  3 14:25 pandaJob.out
[2025-06-03 16:09:42] -rw------- 1 boinc boinc    986893 Jun  3 14:25 agis_schedconf.cvmfs.json
[2025-06-03 16:09:42] -rw------- 1 boinc boinc   1603667 Jun  3 14:25 agis_ddmendpoints.agis.ALL.json
[2025-06-03 16:09:42] drwx------ 1 boinc boinc       368 Jun  3 14:25 pilot3
[2025-06-03 16:09:42] -rw------- 1 boinc boinc 184501139 Jun  3 16:08 HITS.45006595._036469.pool.root.1
[2025-06-03 16:09:42] -rw-r--r-- 1 boinc boinc       529 Jun  3 16:08 boinc_task_state.xml
[2025-06-03 16:09:42] -rw------- 1 boinc boinc      1017 Jun  3 16:08 memory_monitor_summary.json
[2025-06-03 16:09:42] -rw------- 1 boinc boinc    233197 Jun  3 16:08 log.45006595._036469.job.log.tgz.1
[2025-06-03 16:09:42] -rw------- 1 boinc boinc        95 Jun  3 16:08 pilot_heartbeat.json
[2025-06-03 16:09:42] -rw------- 1 boinc boinc      7640 Jun  3 16:09 heartbeat.json
[2025-06-03 16:09:42] -rw-r--r-- 1 boinc boinc        27 Jun  3 16:09 wrapper_checkpoint.txt
[2025-06-03 16:09:42] -rw-r--r-- 1 boinc boinc      8192 Jun  3 16:09 boinc_mmap_file
[2025-06-03 16:09:42] -rw------- 1 boinc boinc      4550 Jun  3 16:09 pilotlog.txt
[2025-06-03 16:09:42] -rw------- 1 boinc boinc    604839 Jun  3 16:09 log.45006595._036469.job.log.1
[2025-06-03 16:09:42] -rw------- 1 boinc boinc       357 Jun  3 16:09 output.list
[2025-06-03 16:09:42] -rw-r--r-- 1 boinc boinc       620 Jun  3 16:09 runtime_log
[2025-06-03 16:09:42] -rw------- 1 boinc boinc    860160 Jun  3 16:09 result.tar.gz
[2025-06-03 16:09:42] -rw------- 1 boinc boinc       645 Jun  3 16:09 UZbMDmOLig7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYjkKDmazqfsm.diag
[2025-06-03 16:09:42] -rw-r--r-- 1 boinc boinc      8665 Jun  3 16:09 runtime_log.err
[2025-06-03 16:09:42] -rw-r--r-- 1 boinc boinc     21114 Jun  3 16:09 stderr.txt
[2025-06-03 16:09:42] HITS file was successfully produced:
[2025-06-03 16:09:42] -rw------- 1 boinc boinc 184501139 Jun  3 16:08 shared/HITS.pool.root.1
[2025-06-03 16:09:42]  *** Contents of shared directory: ***
[2025-06-03 16:09:42] total 392912
[2025-06-03 16:09:42] -rw-r--r-- 2 boinc boinc 216446000 Jun  3 14:25 ATLAS.root_0
[2025-06-03 16:09:42] -rw-r--r-- 2 boinc boinc    508879 Jun  3 14:25 input.tar.gz
[2025-06-03 16:09:42] -rw-r--r-- 2 boinc boinc     15093 Jun  3 14:25 start_atlas.sh
[2025-06-03 16:09:42] -rw------- 1 boinc boinc 184501139 Jun  3 16:08 HITS.pool.root.1
[2025-06-03 16:09:42] -rw------- 1 boinc boinc    860160 Jun  3 16:09 result.tar.gz
16:09:44 (1339567): run_atlas exited; CPU time 12249.785794
16:09:44 (1339567): called boinc_finish(0)

</stderr_txt>
]]>

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