Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:24:18 (3200551): wrapper (7.7.26015): starting
13:24:18 (3200551): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 13:24:18] Arguments: --nthreads 8
[2025-06-03 13:24:18] Threads: 8
[2025-06-03 13:24:18] Checking for CVMFS
[2025-06-03 13:24:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:24:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:24:18] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:24:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:24:18] 2.12.6.0 1583849 138378 436876 146750 1 56 24357088 32935936 3662 130560 1 356938076 99.628 364097884 20289 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 13:24:18] CVMFS is ok
[2025-06-03 13:24:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 13:24:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 13:24:18] Further information can be found at the LHC@home message board.
[2025-06-03 13:24:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:24:18] Checking for apptainer binary...
[2025-06-03 13:24:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:24:18] Running /usr/bin/apptainer --version
[2025-06-03 13:24:18] apptainer version 1.4.1-1.el9
[2025-06-03 13:24:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:24:18] c-6-7.aglt2.org
[2025-06-03 13:24:18] apptainer works
[2025-06-03 13:24:18] Set ATHENA_PROC_NUMBER=8
[2025-06-03 13:24:18] Set ATHENA_CORE_NUMBER=8
[2025-06-03 13:24:18] Starting ATLAS job with PandaID=6677676049
[2025-06-03 13:24:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 17:06:26]  *** The last 200 lines of the pilot log: ***
[2025-06-03 17:06:26] 2025-06-03 21:06:07,340 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6677676049/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 17:06:26] 2025-06-03 21:06:07,341 | INFO     | extracted standard info from prmon json
[2025-06-03 17:06:26] 2025-06-03 21:06:07,341 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 17:06:26] 2025-06-03 21:06:07,341 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 17:06:26] 2025-06-03 21:06:07,342 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 17:06:26] 2025-06-03 21:06:07,342 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 17:06:26] 2025-06-03 21:06:07,391 | INFO     | fitting pss+swap vs Time
[2025-06-03 17:06:26] 2025-06-03 21:06:07,392 | INFO     | sum of square deviations: 3212667745.986249
[2025-06-03 17:06:26] 2025-06-03 21:06:07,432 | INFO     | sum of deviations: 22926259286.999958
[2025-06-03 17:06:26] 2025-06-03 21:06:07,432 | INFO     | mean x: 1748978109.7752295
[2025-06-03 17:06:26] 2025-06-03 21:06:07,432 | INFO     | mean y: 2079512.0
[2025-06-03 17:06:26] 2025-06-03 21:06:07,432 | INFO     | -- intersect: -12478988809.51874
[2025-06-03 17:06:26] 2025-06-03 21:06:07,432 | INFO     | intersect: -12478988809.51874
[2025-06-03 17:06:26] 2025-06-03 21:06:07,433 | INFO     | chi2: 3.97959800829165
[2025-06-03 17:06:26] 2025-06-03 21:06:07,433 | INFO     | sum of square deviations: 2996672693.098589
[2025-06-03 17:06:26] 2025-06-03 21:06:07,458 | INFO     | sum of deviations: 35358959506.32395
[2025-06-03 17:06:26] 2025-06-03 21:06:07,458 | INFO     | mean x: 1748977957.2816901
[2025-06-03 17:06:26] 2025-06-03 21:06:07,458 | INFO     | mean y: 2088147.8779342724
[2025-06-03 17:06:26] 2025-06-03 21:06:07,458 | INFO     | -- intersect: -20634813877.291584
[2025-06-03 17:06:26] 2025-06-03 21:06:07,458 | INFO     | intersect: -20634813877.291584
[2025-06-03 17:06:26] 2025-06-03 21:06:07,459 | INFO     | chi2: 3.332992254487529
[2025-06-03 17:06:26] 2025-06-03 21:06:07,459 | INFO     | current chi2=3.332992254487529 (change=16.248016821218936 %)
[2025-06-03 17:06:26] 2025-06-03 21:06:07,459 | INFO     | right removable region: 212
[2025-06-03 17:06:26] 2025-06-03 21:06:07,459 | INFO     | sum of square deviations: 2996636093.098589
[2025-06-03 17:06:26] 2025-06-03 21:06:07,461 | INFO     | sum of deviations: -19375766330.169006
[2025-06-03 17:06:26] 2025-06-03 21:06:07,512 | INFO     | mean x: 1748978262.2816901
[2025-06-03 17:06:26] 2025-06-03 21:06:07,512 | INFO     | mean y: 2109301.136150235
[2025-06-03 17:06:26] 2025-06-03 21:06:07,512 | INFO     | -- intersect: 11310721049.00919
[2025-06-03 17:06:26] 2025-06-03 21:06:07,513 | INFO     | intersect: 11310721049.00919
[2025-06-03 17:06:26] 2025-06-03 21:06:07,513 | INFO     | chi2: 1.7326433900905753
[2025-06-03 17:06:26] 2025-06-03 21:06:07,513 | INFO     | current chi2=1.7326433900905753 (change=56.4618489988048 %)
[2025-06-03 17:06:26] 2025-06-03 21:06:07,514 | INFO     | sum of square deviations: 2790511602.6923094
[2025-06-03 17:06:26] 2025-06-03 21:06:07,515 | INFO     | sum of deviations: -44608563364.326965
[2025-06-03 17:06:26] 2025-06-03 21:06:07,515 | INFO     | mean x: 1748978414.7884614
[2025-06-03 17:06:26] 2025-06-03 21:06:07,515 | INFO     | mean y: 2127870.4471153845
[2025-06-03 17:06:26] 2025-06-03 21:06:07,515 | INFO     | -- intersect: 27960948885.080208
[2025-06-03 17:06:26] 2025-06-03 21:06:07,515 | INFO     | intersect: 27960948885.080208
[2025-06-03 17:06:26] 2025-06-03 21:06:07,516 | INFO     | chi2: 0.8400092519973992
[2025-06-03 17:06:26] 2025-06-03 21:06:07,570 | INFO     | current chi2=0.8400092519973992 (change=51.51863004230276 %)
[2025-06-03 17:06:26] 2025-06-03 21:06:07,571 | INFO     | sum of square deviations: 2594061712.2660174
[2025-06-03 17:06:26] 2025-06-03 21:06:07,572 | INFO     | sum of deviations: -41452010289.02463
[2025-06-03 17:06:26] 2025-06-03 21:06:07,572 | INFO     | mean x: 1748978567.2955666
[2025-06-03 17:06:26] 2025-06-03 21:06:07,572 | INFO     | mean y: 2125422.0837438423
[2025-06-03 17:06:26] 2025-06-03 21:06:07,572 | INFO     | -- intersect: 27950064063.63937
[2025-06-03 17:06:26] 2025-06-03 21:06:07,573 | INFO     | intersect: 27950064063.63937
[2025-06-03 17:06:26] 2025-06-03 21:06:07,573 | INFO     | chi2: 0.8391503045078509
[2025-06-03 17:06:26] 2025-06-03 21:06:07,573 | INFO     | current chi2=0.8391503045078509 (change=0.10225452725739133 %)
[2025-06-03 17:06:26] 2025-06-03 21:06:07,573 | INFO     | left removable region: 30
[2025-06-03 17:06:26] 2025-06-03 21:06:07,573 | INFO     | sum of square deviations: 1869414253.7197864
[2025-06-03 17:06:26] 2025-06-03 21:06:07,632 | INFO     | sum of deviations: -22101295413.252743
[2025-06-03 17:06:26] 2025-06-03 21:06:07,633 | INFO     | mean x: 1748978841.8296704
[2025-06-03 17:06:26] 2025-06-03 21:06:07,649 | INFO     | mean y: 2131160.1208791207
[2025-06-03 17:06:26] 2025-06-03 21:06:07,649 | INFO     | -- intersect: 20679569549.119217
[2025-06-03 17:06:26] 2025-06-03 21:06:07,650 | INFO     | intersect: 20679569549.119217
[2025-06-03 17:06:26] 2025-06-03 21:06:07,650 | INFO     | chi2: 0.15973574977179725
[2025-06-03 17:06:26] 2025-06-03 21:06:07,650 | INFO     | -- intersect: 20679569549.119217
[2025-06-03 17:06:26] 2025-06-03 21:06:07,650 | INFO     | current memory leak: -11.82 B/s (using 182 data points, chi2=0.16)
[2025-06-03 17:06:26] 2025-06-03 21:06:07,651 | INFO     | ..............................
[2025-06-03 17:06:26] 2025-06-03 21:06:07,651 | INFO     | . Timing measurements:
[2025-06-03 17:06:26] 2025-06-03 21:06:07,651 | INFO     | . get job = 0 s
[2025-06-03 17:06:26] 2025-06-03 21:06:07,651 | INFO     | . initial setup = 2 s
[2025-06-03 17:06:26] 2025-06-03 21:06:07,652 | INFO     | . payload setup = 5 s
[2025-06-03 17:06:26] 2025-06-03 21:06:07,652 | INFO     | . stage-in = 0 s
[2025-06-03 17:06:26] 2025-06-03 21:06:07,652 | INFO     | . payload execution = 13251 s
[2025-06-03 17:06:26] 2025-06-03 21:06:07,652 | INFO     | . stage-out = 4 s
[2025-06-03 17:06:26] 2025-06-03 21:06:07,652 | INFO     | . log creation = 0 s
[2025-06-03 17:06:26] 2025-06-03 21:06:07,652 | INFO     | ..............................
[2025-06-03 17:06:26] 2025-06-03 21:06:08,136 | INFO     | 
[2025-06-03 17:06:26] 2025-06-03 21:06:08,136 | INFO     | job summary report
[2025-06-03 17:06:26] 2025-06-03 21:06:08,136 | INFO     | --------------------------------------------------
[2025-06-03 17:06:26] 2025-06-03 21:06:08,137 | INFO     | PanDA job id: 6677676049
[2025-06-03 17:06:26] 2025-06-03 21:06:08,137 | INFO     | task id: 45006595
[2025-06-03 17:06:26] 2025-06-03 21:06:08,137 | INFO     | errors: (none)
[2025-06-03 17:06:26] 2025-06-03 21:06:08,137 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 17:06:26] 2025-06-03 21:06:08,137 | INFO     | pilot state: finished 
[2025-06-03 17:06:26] 2025-06-03 21:06:08,137 | INFO     | transexitcode: 0
[2025-06-03 17:06:26] 2025-06-03 21:06:08,137 | INFO     | exeerrorcode: 0
[2025-06-03 17:06:26] 2025-06-03 21:06:08,137 | INFO     | exeerrordiag: 
[2025-06-03 17:06:26] 2025-06-03 21:06:08,137 | INFO     | exitcode: 0
[2025-06-03 17:06:26] 2025-06-03 21:06:08,137 | INFO     | exitmsg: OK
[2025-06-03 17:06:26] 2025-06-03 21:06:08,138 | INFO     | cpuconsumptiontime: 41244 s
[2025-06-03 17:06:26] 2025-06-03 21:06:08,138 | INFO     | nevents: 400
[2025-06-03 17:06:26] 2025-06-03 21:06:08,138 | INFO     | neventsw: 0
[2025-06-03 17:06:26] 2025-06-03 21:06:08,138 | INFO     | pid: 3213029
[2025-06-03 17:06:26] 2025-06-03 21:06:08,138 | INFO     | pgrp: 3213029
[2025-06-03 17:06:26] 2025-06-03 21:06:08,138 | INFO     | corecount: 8
[2025-06-03 17:06:26] 2025-06-03 21:06:08,138 | INFO     | event service: False
[2025-06-03 17:06:26] 2025-06-03 21:06:08,138 | INFO     | sizes: {0: 2405013, 1: 2405212, 5: 2405418, 12: 2405474, 13260: 2435419, 13261: 2435418, 13266: 2444543, 13268: 2444599, 13286: 2444769}
[2025-06-03 17:06:26] 2025-06-03 21:06:08,138 | INFO     | --------------------------------------------------
[2025-06-03 17:06:26] 2025-06-03 21:06:08,138 | INFO     | 
[2025-06-03 17:06:26] 2025-06-03 21:06:08,139 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-03 17:06:26] 2025-06-03 21:06:08,374 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 17:06:26] 2025-06-03 21:06:08,375 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 17:06:26] 2025-06-03 21:06:08,375 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 17:06:26] 2025-06-03 21:06:08,375 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 17:06:26] 2025-06-03 21:06:08,375 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 17:06:26] 2025-06-03 21:06:08,375 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 17:06:26] 2025-06-03 21:06:08,375 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 17:06:26] 2025-06-03 21:06:08,375 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 17:06:26] 2025-06-03 21:06:08,375 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 17:06:26] 2025-06-03 21:06:08,376 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 17:06:26] 2025-06-03 21:06:08,376 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 17:06:26] 2025-06-03 21:06:08,376 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 17:06:26] 2025-06-03 21:06:08,376 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 17:06:26] 2025-06-03 21:06:08,376 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 17:06:26] 2025-06-03 21:06:08,376 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 17:06:26] 2025-06-03 21:06:08,376 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 17:06:26] 2025-06-03 21:06:08,376 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 17:06:26] 2025-06-03 21:06:08,376 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 17:06:26] 2025-06-03 21:06:08,376 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 17:06:26] 2025-06-03 21:06:08,377 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 17:06:26] 2025-06-03 21:06:08,377 | INFO     | job 6677676049 has completed (purged errors)
[2025-06-03 17:06:26] 2025-06-03 21:06:08,377 | INFO     | overall cleanup function is called
[2025-06-03 17:06:26] 2025-06-03 21:06:09,422 | INFO     | --- collectZombieJob: --- 10, [3213029]
[2025-06-03 17:06:26] 2025-06-03 21:06:09,422 | INFO     | zombie collector waiting for pid 3213029
[2025-06-03 17:06:26] 2025-06-03 21:06:09,422 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 17:06:26] 2025-06-03 21:06:09,423 | INFO     | collected zombie processes
[2025-06-03 17:06:26] 2025-06-03 21:06:09,423 | INFO     | will attempt to kill all subprocesses of pid=3213029
[2025-06-03 17:06:26] 2025-06-03 21:06:11,136 | INFO     | process IDs to be killed: [3213029] (in reverse order)
[2025-06-03 17:06:26] 2025-06-03 21:06:11,454 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 17:06:26] 2025-06-03 21:06:11,455 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 17:06:26] 2025-06-03 21:06:11,541 | INFO     | did not find any defunct processes belonging to 3213029
[2025-06-03 17:06:26] 2025-06-03 21:06:11,556 | INFO     | did not find any defunct processes belonging to 3213029
[2025-06-03 17:06:26] 2025-06-03 21:06:11,556 | INFO     | ready for new job
[2025-06-03 17:06:26] 2025-06-03 21:06:11,557 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 17:06:26] 2025-06-03 21:06:11,559 | INFO     | **************************************
[2025-06-03 17:06:26] 2025-06-03 21:06:11,559 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 17:06:26] 2025-06-03 21:06:11,559 | INFO     | **************************************
[2025-06-03 17:06:26] 2025-06-03 21:06:11,559 | INFO     | 
[2025-06-03 17:06:26] 2025-06-03 21:06:11,576 | INFO     | architecture information:
[2025-06-03 17:06:26] 2025-06-03 21:06:11,604 | INFO     | executing command: cat /etc/os-release
[2025-06-03 17:06:26] 2025-06-03 21:06:11,716 | INFO     | cat /etc/os-release:
[2025-06-03 17:06:26] NAME="CentOS Linux"
[2025-06-03 17:06:26] VERSION="7 (Core)"
[2025-06-03 17:06:26] ID="centos"
[2025-06-03 17:06:26] ID_LIKE="rhel fedora"
[2025-06-03 17:06:26] VERSION_ID="7"
[2025-06-03 17:06:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 17:06:26] ANSI_COLOR="0;31"
[2025-06-03 17:06:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 17:06:26] HOME_URL="https://www.centos.org/"
[2025-06-03 17:06:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 17:06:26] 
[2025-06-03 17:06:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 17:06:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 17:06:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 17:06:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 17:06:26] 
[2025-06-03 17:06:26] 2025-06-03 21:06:11,717 | INFO     | **************************************
[2025-06-03 17:06:26] 2025-06-03 21:06:12,220 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-03 17:06:26] 2025-06-03 21:06:12,367 | INFO     | sufficient remaining disk space (74135371776 B)
[2025-06-03 17:06:26] 2025-06-03 21:06:12,367 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 17:06:26] 2025-06-03 21:06:12,367 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 17:06:26] 2025-06-03 21:06:12,367 | INFO     | update_server=False
[2025-06-03 17:06:26] 2025-06-03 21:06:12,367 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 17:06:26] 2025-06-03 21:06:12,376 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:06:26] 2025-06-03 21:06:12,376 | INFO     | aborting loop
[2025-06-03 17:06:26] 2025-06-03 21:06:12,377 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 17:06:26] 2025-06-03 21:06:12,377 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 17:06:26] 2025-06-03 21:06:12,377 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 17:06:26] 2025-06-03 21:06:12,377 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 17:06:26] 2025-06-03 21:06:13,118 | INFO     | all payload control threads have been joined
[2025-06-03 17:06:26] 2025-06-03 21:06:13,152 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:06:26] 2025-06-03 21:06:13,272 | INFO     | all job control threads have been joined
[2025-06-03 17:06:26] 2025-06-03 21:06:13,373 | INFO     | [job] retrieve thread has finished
[2025-06-03 17:06:26] 2025-06-03 21:06:13,383 | INFO     | [job] job monitor thread has finished
[2025-06-03 17:06:26] 2025-06-03 21:06:13,446 | INFO     | all data control threads have been joined
[2025-06-03 17:06:26] 2025-06-03 21:06:13,605 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 17:06:26] 2025-06-03 21:06:13,736 | INFO     | [payload] validate_post thread has finished
[2025-06-03 17:06:26] 2025-06-03 21:06:14,100 | INFO     | [job] validate thread has finished
[2025-06-03 17:06:26] 2025-06-03 21:06:14,105 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 17:06:26] 2025-06-03 21:06:14,124 | INFO     | [payload] control thread has finished
[2025-06-03 17:06:26] 2025-06-03 21:06:14,157 | INFO     | [job] queue monitor thread has finished
[2025-06-03 17:06:26] 2025-06-03 21:06:14,279 | INFO     | [job] control thread has finished
[2025-06-03 17:06:26] 2025-06-03 21:06:14,325 | INFO     | [payload] failed_post thread has finished
[2025-06-03 17:06:26] 2025-06-03 21:06:14,334 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 17:06:26] 2025-06-03 21:06:14,452 | INFO     | [data] control thread has finished
[2025-06-03 17:06:26] 2025-06-03 21:06:14,706 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 17:06:26] 2025-06-03 21:06:14,732 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 17:06:26] 2025-06-03 21:06:14,733 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 17:06:26] 2025-06-03 21:06:14,733 | INFO     | [data] copytool_in thread has finished
[2025-06-03 17:06:26] 2025-06-03 21:06:15,612 | INFO     | [data] copytool_out thread has finished
[2025-06-03 17:06:26] 2025-06-03 21:06:18,715 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 17:06:26] 2025-06-03 21:06:20,393 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140555081742144)>', '<ExcThread(monitor, started 140554583127808)>']
[2025-06-03 17:06:26] 2025-06-03 21:06:20,425 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 17:06:26] 2025-06-03 21:06:20,426 | INFO     | [monitor] control thread has ended
[2025-06-03 17:06:26] 2025-06-03 21:06:25,419 | INFO     | all workflow threads have been joined
[2025-06-03 17:06:26] 2025-06-03 21:06:25,419 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 17:06:26] 2025-06-03 21:06:25,420 | INFO     | traces error code: 0
[2025-06-03 17:06:26] 2025-06-03 21:06:25,420 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 17:06:26] 2025-06-03 21:06:25,778 [wrapper] ==== pilot stdout END ====
[2025-06-03 17:06:26] 2025-06-03 21:06:25,781 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 17:06:26] 2025-06-03 21:06:25,784 [wrapper] pilotpid: 3204233
[2025-06-03 17:06:26] 2025-06-03 21:06:25,787 [wrapper] Pilot exit status: 0
[2025-06-03 17:06:26] 2025-06-03 21:06:25,807 [wrapper] pandaids: 6677676049
[2025-06-03 17:06:26] 2025-06-03 21:06:25,885 [wrapper] cleanup supervisor_pilot 1050721 3204234
[2025-06-03 17:06:26] 2025-06-03 21:06:25,908 [wrapper] Test setup, not cleaning
[2025-06-03 17:06:26] 2025-06-03 21:06:25,943 [wrapper] apfmon messages muted
[2025-06-03 17:06:26] 2025-06-03 21:06:25,967 [wrapper] ==== wrapper stdout END ====
[2025-06-03 17:06:26] 2025-06-03 21:06:25,973 [wrapper] ==== wrapper stderr END ====
[2025-06-03 17:06:26]  *** Error codes and diagnostics ***
[2025-06-03 17:06:26]     "exeErrorCode": 0,
[2025-06-03 17:06:26]     "exeErrorDiag": "",
[2025-06-03 17:06:26]     "pilotErrorCode": 0,
[2025-06-03 17:06:26]     "pilotErrorDiag": "",
[2025-06-03 17:06:26]  *** Listing of results directory ***
[2025-06-03 17:06:26] total 392316
[2025-06-03 17:06:26] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 10:52 pilot3.tar.gz
[2025-06-03 17:06:26] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 10:56 queuedata.json
[2025-06-03 17:06:26] -rwx------. 1 boincer umatlas     37140 Jun  3 10:58 runpilot2-wrapper.sh
[2025-06-03 17:06:26] -rw-r--r--. 1 boincer umatlas       100 Jun  3 13:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 17:06:26] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 13:24 run_atlas
[2025-06-03 17:06:26] -rw-r--r--. 1 boincer umatlas       105 Jun  3 13:24 job.xml
[2025-06-03 17:06:26] -rw-r--r--. 2 boincer umatlas 214876770 Jun  3 13:24 EVNT.45006593._001459.pool.root.1
[2025-06-03 17:06:26] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:24 start_atlas.sh
[2025-06-03 17:06:26] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 13:24 shared
[2025-06-03 17:06:26] -rw-r--r--. 2 boincer umatlas    508877 Jun  3 13:24 input.tar.gz
[2025-06-03 17:06:26] -rw-r--r--. 1 boincer umatlas         0 Jun  3 13:24 boinc_lockfile
[2025-06-03 17:06:26] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 13:24 pandaJob.out
[2025-06-03 17:06:26] -rw-------. 1 boincer umatlas    985078 Jun  3 13:24 agis_schedconf.cvmfs.json
[2025-06-03 17:06:26] drwx------. 4 boincer umatlas      4096 Jun  3 13:24 pilot3
[2025-06-03 17:06:26] -rw-------. 1 boincer umatlas 180058225 Jun  3 17:04 HITS.45006595._036316.pool.root.1
[2025-06-03 17:06:26] -rw-r--r--. 1 boincer umatlas       530 Jun  3 17:04 boinc_task_state.xml
[2025-06-03 17:06:26] -rw-r--r--. 1 boincer umatlas      6658 Jun  3 17:04 init_data.xml
[2025-06-03 17:06:26] -rw-------. 1 boincer umatlas      1045 Jun  3 17:05 memory_monitor_summary.json
[2025-06-03 17:06:26] -rw-------. 1 boincer umatlas   1603667 Jun  3 17:05 agis_ddmendpoints.agis.ALL.json
[2025-06-03 17:06:26] -rw-------. 1 boincer umatlas    385850 Jun  3 17:05 log.45006595._036316.job.log.tgz.1
[2025-06-03 17:06:26] -rw-------. 1 boincer umatlas      7716 Jun  3 17:06 heartbeat.json
[2025-06-03 17:06:26] -rw-------. 1 boincer umatlas        95 Jun  3 17:06 pilot_heartbeat.json
[2025-06-03 17:06:26] -rw-r--r--. 1 boincer umatlas        28 Jun  3 17:06 wrapper_checkpoint.txt
[2025-06-03 17:06:26] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 17:06 boinc_mmap_file
[2025-06-03 17:06:26] -rw-------. 1 boincer umatlas      4476 Jun  3 17:06 pilotlog.txt
[2025-06-03 17:06:26] -rw-------. 1 boincer umatlas   1102444 Jun  3 17:06 log.45006595._036316.job.log.1
[2025-06-03 17:06:26] -rw-------. 1 boincer umatlas       357 Jun  3 17:06 output.list
[2025-06-03 17:06:26] -rw-r--r--. 1 boincer umatlas       620 Jun  3 17:06 runtime_log
[2025-06-03 17:06:26] -rw-------. 1 boincer umatlas   1505280 Jun  3 17:06 result.tar.gz
[2025-06-03 17:06:26] -rw-------. 1 boincer umatlas       654 Jun  3 17:06 ZsnNDmyGig7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvhkKDmyz71Vo.diag
[2025-06-03 17:06:26] -rw-r--r--. 1 boincer umatlas      8645 Jun  3 17:06 runtime_log.err
[2025-06-03 17:06:26] -rw-r--r--. 1 boincer umatlas      2140 Jun  3 17:06 stderr.txt
[2025-06-03 17:06:26] HITS file was successfully produced:
[2025-06-03 17:06:26] -rw-------. 1 boincer umatlas 180058225 Jun  3 17:04 shared/HITS.pool.root.1
[2025-06-03 17:06:26]  *** Contents of shared directory: ***
[2025-06-03 17:06:26] total 387680
[2025-06-03 17:06:26] -rw-r--r--. 2 boincer umatlas 214876770 Jun  3 13:24 ATLAS.root_0
[2025-06-03 17:06:26] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:24 start_atlas.sh
[2025-06-03 17:06:26] -rw-r--r--. 2 boincer umatlas    508877 Jun  3 13:24 input.tar.gz
[2025-06-03 17:06:26] -rw-------. 1 boincer umatlas 180058225 Jun  3 17:04 HITS.pool.root.1
[2025-06-03 17:06:26] -rw-------. 1 boincer umatlas   1505280 Jun  3 17:06 result.tar.gz
17:06:28 (3200551): run_atlas exited; CPU time 41797.053744
17:06:28 (3200551): called boinc_finish(0)

</stderr_txt>
]]>

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