Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:26:31 (3242008): wrapper (7.7.26015): starting
13:26:31 (3242008): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 13:26:31] Arguments: --nthreads 8
[2025-06-03 13:26:31] Threads: 8
[2025-06-03 13:26:31] Checking for CVMFS
[2025-06-03 13:26:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:26:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:26:31] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:26:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:26:31] 2.12.6.0 1583849 138380 436956 146750 3 186 24362011 32935936 3224 130560 1 357039103 99.628 364097952 20289 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 13:26:31] CVMFS is ok
[2025-06-03 13:26:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 13:26:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 13:26:31] Further information can be found at the LHC@home message board.
[2025-06-03 13:26:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:26:31] Checking for apptainer binary...
[2025-06-03 13:26:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:26:31] Running /usr/bin/apptainer --version
[2025-06-03 13:26:31] apptainer version 1.4.1-1.el9
[2025-06-03 13:26:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:26:31] c-6-7.aglt2.org
[2025-06-03 13:26:31] apptainer works
[2025-06-03 13:26:31] Set ATHENA_PROC_NUMBER=8
[2025-06-03 13:26:31] Set ATHENA_CORE_NUMBER=8
[2025-06-03 13:26:31] Starting ATLAS job with PandaID=6677675811
[2025-06-03 13:26:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 17:14:01]  *** The last 200 lines of the pilot log: ***
[2025-06-03 17:14:01] 2025-06-03 21:13:45,749 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 17:14:01] 2025-06-03 21:13:45,750 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 17:14:01] 2025-06-03 21:13:45,750 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 17:14:01] 2025-06-03 21:13:45,755 | INFO     | fitting pss+swap vs Time
[2025-06-03 17:14:01] 2025-06-03 21:13:45,755 | INFO     | sum of square deviations: 3438900216.8071756
[2025-06-03 17:14:01] 2025-06-03 21:13:45,757 | INFO     | sum of deviations: 11778444602.74436
[2025-06-03 17:14:01] 2025-06-03 21:13:45,758 | INFO     | mean x: 1748978389.4349775
[2025-06-03 17:14:01] 2025-06-03 21:13:45,758 | INFO     | mean y: 2031174.8789237668
[2025-06-03 17:14:01] 2025-06-03 21:13:45,758 | INFO     | -- intersect: -5988327303.88005
[2025-06-03 17:14:01] 2025-06-03 21:13:45,758 | INFO     | intersect: -5988327303.88005
[2025-06-03 17:14:01] 2025-06-03 21:13:45,758 | INFO     | chi2: 4.279907272388982
[2025-06-03 17:14:01] 2025-06-03 21:13:45,759 | INFO     | sum of square deviations: 3212763120.224764
[2025-06-03 17:14:01] 2025-06-03 21:13:45,760 | INFO     | sum of deviations: 22883158316.536716
[2025-06-03 17:14:01] 2025-06-03 21:13:45,761 | INFO     | mean x: 1748978236.940367
[2025-06-03 17:14:01] 2025-06-03 21:13:45,761 | INFO     | mean y: 2038515.0412844038
[2025-06-03 17:14:01] 2025-06-03 21:13:45,761 | INFO     | -- intersect: -12455196702.874111
[2025-06-03 17:14:01] 2025-06-03 21:13:45,761 | INFO     | intersect: -12455196702.874111
[2025-06-03 17:14:01] 2025-06-03 21:13:45,761 | INFO     | chi2: 3.640344763380507
[2025-06-03 17:14:01] 2025-06-03 21:13:45,762 | INFO     | current chi2=3.640344763380507 (change=14.94337302900211 %)
[2025-06-03 17:14:01] 2025-06-03 21:13:45,762 | INFO     | right removable region: 217
[2025-06-03 17:14:01] 2025-06-03 21:13:45,762 | INFO     | sum of square deviations: 3212717553.339445
[2025-06-03 17:14:01] 2025-06-03 21:13:45,764 | INFO     | sum of deviations: -32545756341.770622
[2025-06-03 17:14:01] 2025-06-03 21:13:45,764 | INFO     | mean x: 1748978541.9449542
[2025-06-03 17:14:01] 2025-06-03 21:13:45,764 | INFO     | mean y: 2060983.4357798165
[2025-06-03 17:14:01] 2025-06-03 21:13:45,764 | INFO     | -- intersect: 17719718551.546173
[2025-06-03 17:14:01] 2025-06-03 21:13:45,764 | INFO     | intersect: 17719718551.546173
[2025-06-03 17:14:01] 2025-06-03 21:13:45,765 | INFO     | chi2: 1.8318887393482128
[2025-06-03 17:14:01] 2025-06-03 21:13:45,765 | INFO     | current chi2=1.8318887393482128 (change=57.19793390930923 %)
[2025-06-03 17:14:01] 2025-06-03 21:13:45,765 | INFO     | sum of square deviations: 2996674614.826312
[2025-06-03 17:14:01] 2025-06-03 21:13:45,767 | INFO     | sum of deviations: -57039064736.52583
[2025-06-03 17:14:01] 2025-06-03 21:13:45,767 | INFO     | mean x: 1748978694.455399
[2025-06-03 17:14:01] 2025-06-03 21:13:45,767 | INFO     | mean y: 2078186.8920187794
[2025-06-03 17:14:01] 2025-06-03 21:13:45,767 | INFO     | -- intersect: 33292348836.322556
[2025-06-03 17:14:01] 2025-06-03 21:13:45,767 | INFO     | intersect: 33292348836.322556
[2025-06-03 17:14:01] 2025-06-03 21:13:45,768 | INFO     | chi2: 0.977562791387794
[2025-06-03 17:14:01] 2025-06-03 21:13:45,768 | INFO     | current chi2=0.977562791387794 (change=46.636344752268556 %)
[2025-06-03 17:14:01] 2025-06-03 21:13:45,768 | INFO     | sum of square deviations: 2790538838.7644095
[2025-06-03 17:14:01] 2025-06-03 21:13:45,770 | INFO     | sum of deviations: -54257004376.41827
[2025-06-03 17:14:01] 2025-06-03 21:13:45,770 | INFO     | mean x: 1748978846.9663463
[2025-06-03 17:14:01] 2025-06-03 21:13:45,770 | INFO     | mean y: 2076125.2259615385
[2025-06-03 17:14:01] 2025-06-03 21:13:45,770 | INFO     | -- intersect: 34007821408.50365
[2025-06-03 17:14:01] 2025-06-03 21:13:45,770 | INFO     | intersect: 34007821408.50365
[2025-06-03 17:14:01] 2025-06-03 21:13:45,771 | INFO     | chi2: 0.9761202174566546
[2025-06-03 17:14:01] 2025-06-03 21:13:45,771 | INFO     | current chi2=0.9761202174566546 (change=0.14756841645859908 %)
[2025-06-03 17:14:01] 2025-06-03 21:13:45,771 | INFO     | left removable region: 30
[2025-06-03 17:14:01] 2025-06-03 21:13:45,771 | INFO     | sum of square deviations: 2027765492.7165782
[2025-06-03 17:14:01] 2025-06-03 21:13:45,772 | INFO     | sum of deviations: -31110537792.262047
[2025-06-03 17:14:01] 2025-06-03 21:13:45,773 | INFO     | mean x: 1748979121.513369
[2025-06-03 17:14:01] 2025-06-03 21:13:45,773 | INFO     | mean y: 2074854.3048128341
[2025-06-03 17:14:01] 2025-06-03 21:13:45,773 | INFO     | -- intersect: 26835395202.815197
[2025-06-03 17:14:01] 2025-06-03 21:13:45,773 | INFO     | intersect: 26835395202.815197
[2025-06-03 17:14:01] 2025-06-03 21:13:45,773 | INFO     | chi2: 0.28841805922653757
[2025-06-03 17:14:01] 2025-06-03 21:13:45,774 | INFO     | -- intersect: 26835395202.815197
[2025-06-03 17:14:01] 2025-06-03 21:13:45,774 | INFO     | current memory leak: -15.34 B/s (using 187 data points, chi2=0.29)
[2025-06-03 17:14:01] 2025-06-03 21:13:45,774 | INFO     | ..............................
[2025-06-03 17:14:01] 2025-06-03 21:13:45,775 | INFO     | . Timing measurements:
[2025-06-03 17:14:01] 2025-06-03 21:13:45,775 | INFO     | . get job = 0 s
[2025-06-03 17:14:01] 2025-06-03 21:13:45,775 | INFO     | . initial setup = 2 s
[2025-06-03 17:14:01] 2025-06-03 21:13:45,775 | INFO     | . payload setup = 3 s
[2025-06-03 17:14:01] 2025-06-03 21:13:45,775 | INFO     | . stage-in = 0 s
[2025-06-03 17:14:01] 2025-06-03 21:13:45,775 | INFO     | . payload execution = 13576 s
[2025-06-03 17:14:01] 2025-06-03 21:13:45,775 | INFO     | . stage-out = 5 s
[2025-06-03 17:14:01] 2025-06-03 21:13:45,775 | INFO     | . log creation = 0 s
[2025-06-03 17:14:01] 2025-06-03 21:13:45,775 | INFO     | ..............................
[2025-06-03 17:14:01] 2025-06-03 21:13:45,893 | INFO     | 
[2025-06-03 17:14:01] 2025-06-03 21:13:45,893 | INFO     | job summary report
[2025-06-03 17:14:01] 2025-06-03 21:13:45,893 | INFO     | --------------------------------------------------
[2025-06-03 17:14:01] 2025-06-03 21:13:45,893 | INFO     | PanDA job id: 6677675811
[2025-06-03 17:14:01] 2025-06-03 21:13:45,893 | INFO     | task id: 45006595
[2025-06-03 17:14:01] 2025-06-03 21:13:45,893 | INFO     | errors: (none)
[2025-06-03 17:14:01] 2025-06-03 21:13:45,893 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 17:14:01] 2025-06-03 21:13:45,893 | INFO     | pilot state: finished 
[2025-06-03 17:14:01] 2025-06-03 21:13:45,894 | INFO     | transexitcode: 0
[2025-06-03 17:14:01] 2025-06-03 21:13:45,894 | INFO     | exeerrorcode: 0
[2025-06-03 17:14:01] 2025-06-03 21:13:45,894 | INFO     | exeerrordiag: 
[2025-06-03 17:14:01] 2025-06-03 21:13:45,894 | INFO     | exitcode: 0
[2025-06-03 17:14:01] 2025-06-03 21:13:45,894 | INFO     | exitmsg: OK
[2025-06-03 17:14:01] 2025-06-03 21:13:45,894 | INFO     | cpuconsumptiontime: 42486 s
[2025-06-03 17:14:01] 2025-06-03 21:13:45,894 | INFO     | nevents: 400
[2025-06-03 17:14:01] 2025-06-03 21:13:45,894 | INFO     | neventsw: 0
[2025-06-03 17:14:01] 2025-06-03 21:13:45,894 | INFO     | pid: 3252936
[2025-06-03 17:14:01] 2025-06-03 21:13:45,894 | INFO     | pgrp: 3252936
[2025-06-03 17:14:01] 2025-06-03 21:13:45,894 | INFO     | corecount: 8
[2025-06-03 17:14:01] 2025-06-03 21:13:45,895 | INFO     | event service: False
[2025-06-03 17:14:01] 2025-06-03 21:13:45,895 | INFO     | sizes: {0: 2405012, 1: 2405211, 3: 2405417, 11: 2405445, 13583: 2435507, 13589: 2444448, 13594: 2444632, 13614: 2444802}
[2025-06-03 17:14:01] 2025-06-03 21:13:45,895 | INFO     | --------------------------------------------------
[2025-06-03 17:14:01] 2025-06-03 21:13:45,895 | INFO     | 
[2025-06-03 17:14:01] 2025-06-03 21:13:45,895 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-03 17:14:01] 2025-06-03 21:13:45,917 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 17:14:01] 2025-06-03 21:13:45,917 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 17:14:01] 2025-06-03 21:13:45,918 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 17:14:01] 2025-06-03 21:13:45,918 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 17:14:01] 2025-06-03 21:13:45,918 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 17:14:01] 2025-06-03 21:13:45,918 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 17:14:01] 2025-06-03 21:13:45,918 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 17:14:01] 2025-06-03 21:13:45,918 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 17:14:01] 2025-06-03 21:13:45,918 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 17:14:01] 2025-06-03 21:13:45,918 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 17:14:01] 2025-06-03 21:13:45,918 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 17:14:01] 2025-06-03 21:13:45,919 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 17:14:01] 2025-06-03 21:13:45,919 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 17:14:01] 2025-06-03 21:13:45,919 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 17:14:01] 2025-06-03 21:13:45,919 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 17:14:01] 2025-06-03 21:13:45,919 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 17:14:01] 2025-06-03 21:13:45,919 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 17:14:01] 2025-06-03 21:13:45,919 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 17:14:01] 2025-06-03 21:13:45,919 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 17:14:01] 2025-06-03 21:13:45,919 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 17:14:01] 2025-06-03 21:13:45,920 | INFO     | job 6677675811 has completed (purged errors)
[2025-06-03 17:14:01] 2025-06-03 21:13:45,920 | INFO     | overall cleanup function is called
[2025-06-03 17:14:01] 2025-06-03 21:13:46,928 | INFO     | --- collectZombieJob: --- 10, [3252936]
[2025-06-03 17:14:01] 2025-06-03 21:13:46,929 | INFO     | zombie collector waiting for pid 3252936
[2025-06-03 17:14:01] 2025-06-03 21:13:46,929 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 17:14:01] 2025-06-03 21:13:46,929 | INFO     | collected zombie processes
[2025-06-03 17:14:01] 2025-06-03 21:13:46,929 | INFO     | will attempt to kill all subprocesses of pid=3252936
[2025-06-03 17:14:01] 2025-06-03 21:13:47,340 | INFO     | process IDs to be killed: [3252936] (in reverse order)
[2025-06-03 17:14:01] 2025-06-03 21:13:47,457 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 17:14:01] 2025-06-03 21:13:47,465 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 17:14:01] 2025-06-03 21:13:47,484 | INFO     | did not find any defunct processes belonging to 3252936
[2025-06-03 17:14:01] 2025-06-03 21:13:47,498 | INFO     | did not find any defunct processes belonging to 3252936
[2025-06-03 17:14:01] 2025-06-03 21:13:47,499 | INFO     | ready for new job
[2025-06-03 17:14:01] 2025-06-03 21:13:47,499 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 17:14:01] 2025-06-03 21:13:47,501 | INFO     | **************************************
[2025-06-03 17:14:01] 2025-06-03 21:13:47,502 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 17:14:01] 2025-06-03 21:13:47,502 | INFO     | **************************************
[2025-06-03 17:14:01] 2025-06-03 21:13:47,502 | INFO     | 
[2025-06-03 17:14:01] 2025-06-03 21:13:47,516 | INFO     | architecture information:
[2025-06-03 17:14:01] 2025-06-03 21:13:47,517 | INFO     | executing command: cat /etc/os-release
[2025-06-03 17:14:01] 2025-06-03 21:13:47,534 | INFO     | cat /etc/os-release:
[2025-06-03 17:14:01] NAME="CentOS Linux"
[2025-06-03 17:14:01] VERSION="7 (Core)"
[2025-06-03 17:14:01] ID="centos"
[2025-06-03 17:14:01] ID_LIKE="rhel fedora"
[2025-06-03 17:14:01] VERSION_ID="7"
[2025-06-03 17:14:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 17:14:01] ANSI_COLOR="0;31"
[2025-06-03 17:14:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 17:14:01] HOME_URL="https://www.centos.org/"
[2025-06-03 17:14:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 17:14:01] 
[2025-06-03 17:14:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 17:14:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 17:14:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 17:14:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 17:14:01] 
[2025-06-03 17:14:01] 2025-06-03 21:13:47,535 | INFO     | **************************************
[2025-06-03 17:14:01] 2025-06-03 21:13:48,038 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-03 17:14:01] 2025-06-03 21:13:48,124 | INFO     | sufficient remaining disk space (75366400000 B)
[2025-06-03 17:14:01] 2025-06-03 21:13:48,124 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 17:14:01] 2025-06-03 21:13:48,124 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 17:14:01] 2025-06-03 21:13:48,124 | INFO     | update_server=False
[2025-06-03 17:14:01] 2025-06-03 21:13:48,125 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 17:14:01] 2025-06-03 21:13:48,125 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 17:14:01] 2025-06-03 21:13:48,164 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 17:14:01] 2025-06-03 21:13:48,164 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 17:14:01] 2025-06-03 21:13:48,165 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:14:01] 2025-06-03 21:13:48,165 | INFO     | will abort loop
[2025-06-03 17:14:01] 2025-06-03 21:13:48,990 | INFO     | all job control threads have been joined
[2025-06-03 17:14:01] 2025-06-03 21:13:49,052 | INFO     | all data control threads have been joined
[2025-06-03 17:14:01] 2025-06-03 21:13:49,143 | INFO     | [job] validate thread has finished
[2025-06-03 17:14:01] 2025-06-03 21:13:49,148 | INFO     | [job] retrieve thread has finished
[2025-06-03 17:14:01] 2025-06-03 21:13:49,170 | INFO     | [job] job monitor thread has finished
[2025-06-03 17:14:01] 2025-06-03 21:13:49,387 | INFO     | [payload] failed_post thread has finished
[2025-06-03 17:14:01] 2025-06-03 21:13:49,629 | INFO     | PID=3245669 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 17:14:01] 2025-06-03 21:13:49,629 | INFO     | .. there are 32 such processes running
[2025-06-03 17:14:01] 2025-06-03 21:13:49,630 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 17:14:01] 2025-06-03 21:13:49,630 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 17:14:01] 2025-06-03 21:13:49,630 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 17:14:01] 2025-06-03 21:13:49,656 | INFO     | all payload control threads have been joined
[2025-06-03 17:14:01] 2025-06-03 21:13:49,754 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 17:14:01] 2025-06-03 21:13:49,815 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 17:14:01] 2025-06-03 21:13:49,817 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 17:14:01] 2025-06-03 21:13:49,859 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 17:14:01] 2025-06-03 21:13:49,995 | INFO     | [job] control thread has finished
[2025-06-03 17:14:01] 2025-06-03 21:13:50,069 | INFO     | [data] control thread has finished
[2025-06-03 17:14:01] 2025-06-03 21:13:50,080 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 17:14:01] 2025-06-03 21:13:50,129 | INFO     | [data] copytool_in thread has finished
[2025-06-03 17:14:01] 2025-06-03 21:13:50,154 | INFO     | [data] copytool_out thread has finished
[2025-06-03 17:14:01] 2025-06-03 21:13:50,578 | INFO     | [payload] validate_post thread has finished
[2025-06-03 17:14:01] 2025-06-03 21:13:50,662 | INFO     | [payload] control thread has finished
[2025-06-03 17:14:01] 2025-06-03 21:13:50,919 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:14:01] 2025-06-03 21:13:51,925 | INFO     | [job] queue monitor thread has finished
[2025-06-03 17:14:01] 2025-06-03 21:13:53,891 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 17:14:01] 2025-06-03 21:13:55,416 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139940945766208)>', '<ExcThread(monitor, started 139940604131072)>']
[2025-06-03 17:14:01] 2025-06-03 21:13:55,668 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 17:14:01] 2025-06-03 21:13:55,672 | INFO     | [monitor] control thread has ended
[2025-06-03 17:14:01] 2025-06-03 21:14:00,442 | INFO     | all workflow threads have been joined
[2025-06-03 17:14:01] 2025-06-03 21:14:00,442 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 17:14:01] 2025-06-03 21:14:00,443 | INFO     | traces error code: 0
[2025-06-03 17:14:01] 2025-06-03 21:14:00,443 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 17:14:01] 2025-06-03 21:14:00,659 [wrapper] ==== pilot stdout END ====
[2025-06-03 17:14:01] 2025-06-03 21:14:00,665 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 17:14:01] 2025-06-03 21:14:00,668 [wrapper] pilotpid: 3245669
[2025-06-03 17:14:01] 2025-06-03 21:14:00,671 [wrapper] Pilot exit status: 0
[2025-06-03 17:14:01] 2025-06-03 21:14:00,686 [wrapper] pandaids: 6677675811
[2025-06-03 17:14:01] 2025-06-03 21:14:00,760 [wrapper] cleanup supervisor_pilot 1125951 3245670
[2025-06-03 17:14:01] 2025-06-03 21:14:00,764 [wrapper] Test setup, not cleaning
[2025-06-03 17:14:01] 2025-06-03 21:14:00,769 [wrapper] apfmon messages muted
[2025-06-03 17:14:01] 2025-06-03 21:14:00,772 [wrapper] ==== wrapper stdout END ====
[2025-06-03 17:14:01] 2025-06-03 21:14:00,775 [wrapper] ==== wrapper stderr END ====
[2025-06-03 17:14:01]  *** Error codes and diagnostics ***
[2025-06-03 17:14:01]     "exeErrorCode": 0,
[2025-06-03 17:14:01]     "exeErrorDiag": "",
[2025-06-03 17:14:01]     "pilotErrorCode": 0,
[2025-06-03 17:14:01]     "pilotErrorDiag": "",
[2025-06-03 17:14:01]  *** Listing of results directory ***
[2025-06-03 17:14:01] total 388412
[2025-06-03 17:14:01] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 10:52 pilot3.tar.gz
[2025-06-03 17:14:01] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 10:54 queuedata.json
[2025-06-03 17:14:01] -rwx------. 1 boincer umatlas     37140 Jun  3 10:55 runpilot2-wrapper.sh
[2025-06-03 17:14:01] -rw-r--r--. 1 boincer umatlas       100 Jun  3 13:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 17:14:01] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 13:26 run_atlas
[2025-06-03 17:14:01] -rw-r--r--. 1 boincer umatlas       105 Jun  3 13:26 job.xml
[2025-06-03 17:14:01] -rw-r--r--. 2 boincer umatlas 213670342 Jun  3 13:26 EVNT.45006593._001451.pool.root.1
[2025-06-03 17:14:01] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:26 start_atlas.sh
[2025-06-03 17:14:01] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 13:26 shared
[2025-06-03 17:14:01] -rw-r--r--. 2 boincer umatlas    508882 Jun  3 13:26 input.tar.gz
[2025-06-03 17:14:01] -rw-r--r--. 1 boincer umatlas         0 Jun  3 13:26 boinc_lockfile
[2025-06-03 17:14:01] -rw-r--r--. 1 boincer umatlas      2524 Jun  3 13:26 pandaJob.out
[2025-06-03 17:14:01] -rw-------. 1 boincer umatlas    985078 Jun  3 13:26 agis_schedconf.cvmfs.json
[2025-06-03 17:14:01] drwx------. 4 boincer umatlas      4096 Jun  3 13:26 pilot3
[2025-06-03 17:14:01] -rw-------. 1 boincer umatlas 177198038 Jun  3 17:12 HITS.45006595._036111.pool.root.1
[2025-06-03 17:14:01] -rw-r--r--. 1 boincer umatlas       529 Jun  3 17:12 boinc_task_state.xml
[2025-06-03 17:14:01] -rw-------. 1 boincer umatlas      1060 Jun  3 17:13 memory_monitor_summary.json
[2025-06-03 17:14:01] -rw-r--r--. 1 boincer umatlas      6657 Jun  3 17:13 init_data.xml
[2025-06-03 17:14:01] -rw-------. 1 boincer umatlas   1603667 Jun  3 17:13 agis_ddmendpoints.agis.ALL.json
[2025-06-03 17:14:01] -rw-------. 1 boincer umatlas        95 Jun  3 17:13 pilot_heartbeat.json
[2025-06-03 17:14:01] -rw-------. 1 boincer umatlas    383789 Jun  3 17:13 log.45006595._036111.job.log.tgz.1
[2025-06-03 17:14:01] -rw-------. 1 boincer umatlas      7735 Jun  3 17:13 heartbeat.json
[2025-06-03 17:14:01] -rw-r--r--. 1 boincer umatlas        27 Jun  3 17:13 wrapper_checkpoint.txt
[2025-06-03 17:14:01] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 17:13 boinc_mmap_file
[2025-06-03 17:14:01] -rw-------. 1 boincer umatlas      4934 Jun  3 17:14 pilotlog.txt
[2025-06-03 17:14:01] -rw-------. 1 boincer umatlas   1131316 Jun  3 17:14 log.45006595._036111.job.log.1
[2025-06-03 17:14:01] -rw-------. 1 boincer umatlas       357 Jun  3 17:14 output.list
[2025-06-03 17:14:01] -rw-r--r--. 1 boincer umatlas       620 Jun  3 17:14 runtime_log
[2025-06-03 17:14:01] -rw-------. 1 boincer umatlas   1536000 Jun  3 17:14 result.tar.gz
[2025-06-03 17:14:01] -rw-r--r--. 1 boincer umatlas      8645 Jun  3 17:14 runtime_log.err
[2025-06-03 17:14:01] -rw-------. 1 boincer umatlas       655 Jun  3 17:14 9EeMDmMEig7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDgkKDm8lMbmm.diag
[2025-06-03 17:14:01] -rw-r--r--. 1 boincer umatlas     20988 Jun  3 17:14 stderr.txt
[2025-06-03 17:14:01] HITS file was successfully produced:
[2025-06-03 17:14:01] -rw-------. 1 boincer umatlas 177198038 Jun  3 17:12 shared/HITS.pool.root.1
[2025-06-03 17:14:01]  *** Contents of shared directory: ***
[2025-06-03 17:14:01] total 383732
[2025-06-03 17:14:01] -rw-r--r--. 2 boincer umatlas 213670342 Jun  3 13:26 ATLAS.root_0
[2025-06-03 17:14:01] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 13:26 start_atlas.sh
[2025-06-03 17:14:01] -rw-r--r--. 2 boincer umatlas    508882 Jun  3 13:26 input.tar.gz
[2025-06-03 17:14:01] -rw-------. 1 boincer umatlas 177198038 Jun  3 17:12 HITS.pool.root.1
[2025-06-03 17:14:01] -rw-------. 1 boincer umatlas   1536000 Jun  3 17:14 result.tar.gz
17:14:23 (3242008): run_atlas exited; CPU time 43058.024646
17:14:23 (3242008): called boinc_finish(0)

</stderr_txt>
]]>

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